New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 2430980NA (NA)4 (0.060) 3/250 NT NA noncoding (34/36 nt) other REP169b
?NC_000913 = 2431012 NA (NA)noncoding (2/36 nt) other REP169b

GGATTTCCTTCCCGCGCATCAATAAAAATGGCGCTGAAAAAATATTCAACGCCATCGACTTTTTATGCCTTTGCGGCATCGGGCAATGCGTGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGTATAGCCCATTACCACGCCACTTAAGCCAGAAAGTTGCTTCAACTCACCCAGCGAACCTTTCAGCTTATCTTTCGAGGCATCCGGCCC  >  NC_000913/2430838‑2431120
                                                                                                                                              |                                                                                                                                            
ggATTTCCTTCCCGCGCATCAATAAAAATGGCGCTGAAAAAATATTCAACGCCATCGACTTTTTATGCCTTTGCGGCATCGGGCAATGCGTGTCGGATGCGGCGTACACGCCTTATCCGACCTACGGTTCTACCCCTGCGTAg                                                                                                                                              >  1:462264/1‑143 (MQ=255)
ggATTTCCTTCCCGCGCATCAATAAAAATGGCGCTGAAAAAATATTCAACGCCATCGACTTTTTATGCCTTTGCGGCATCGGGCAATGCGTGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTCTACCCCTGCGTAg                                                                                                                                              >  2:527288/1‑143 (MQ=255)
 gATTTCCTTCCCGCGCATCAATAAAAATGGCGCTGAAAAAATATTCAACGCCATCGACTTTTTATGCCTTTGCGGCATCGGGCAATGCGTGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTCTACCCCTGCGTAGg                                                                                                                                             >  2:1270611‑M1/1‑142 (MQ=255)
    ttccttccCGCGCATCAATAAAAATGGCGCTGAAAAAATATTCAACGCCATCGACTTTTTATGCCTTTGCGGCATCGGGCAATGCGTGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTCTACCCCTGCGTAGgcct                                                                                                                                          <  1:1277885‑M1/143‑5 (MQ=255)
       cttccCGCGCATCAATAAAAATGGCGCTGAAAAAATATTCAACGCCATCGACTTTTTATGCCTTTGCGGCATCGGGCAATGCGTGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTCTACCCCTGCGTAGgcctgat                                                                                                                                       <  2:978211‑M1/143‑8 (MQ=255)
       cttccCGCGCATCAATAAAAATGGCGCTGAAAAAATATTCAACGCCATCGACTTTTTATGCCTTTGCGGCATCGGGCAATGCGTGTCGGATGCGGCGTAAACGCCTTAACAGACCTACGGTTCTAGCCCTGCGTAGgcctgat                                                                                                                                       >  1:532271‑M1/1‑136 (MQ=255)
          cccGCGCATCAATAACAATGGCGCTGAAAAGATATTCAGCGCCCTCGACTTTTTATGCCTTTGCGGCATCGGGCAATGCGTGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTCTACCCCTGCGTAGGCCTGATAAg                                                                                                                                    <  2:760582/143‑1 (MQ=255)
                       aaaaaTGGCGCTGAAAAAATATTCAACGCCATCGACTTTTTATGCCTTTGCGGCATCGGGCAATGCGTGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCCGCGTc                                                                                                                       >  2:967754/1‑143 (MQ=255)
                         gtaTGGCGCTGAACAAATTGTCAACGCCATCGACTTTTTATGCCTTTGCGGCATCGGGCAATGCGTGTAGGTTGCTTCCTAAACGCCTTATCCGACCTACGGTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGc                                                                                                                     <  2:452586/141‑1 (MQ=255)
                          cattgcgcTGAAAAAATATTCAACGCCATCGACTCTTTATGCCTTTTCGGCATCGGGCAATGCGTGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCa                                                                                                                    <  1:288078/139‑1 (MQ=255)
                          aaTGGCGCTGAAAAAATATTCAACGCCATCGACTTTTTATGCCTTTGCGGCATCGGGCCATGCGTGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCA                                                                                                                    >  1:90091‑M2/1‑143 (MQ=255)
                          aaTGGCGCTGAAAAAATATTCAACGCCATCGACTTTTTATGCCTTTGCGGCATCGGGCAATGCGTGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCA                                                                                                                    >  1:211072‑M2/1‑143 (MQ=255)
                              gcgcTGAAAAAATATTCAACGCCATCGACTTTTTATGCCTTTGCGGCATCGGGCAATGCGTGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTCTACCCCTGCGTAGgcctgatgcgacgctggcgcgtcttatcag                                                                                                                <  2:527291‑M1/143‑31 (MQ=255)
                              gcgcTGAAAAAATATGCAACGCCAGCGACGTTTTATGCCGTTGCGGCAGCGGGCAATGCGTGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTCTACCCCTGCGTAGgcctgatgcgacgctggcgcgtcttatcag                                                                                                                <  1:175079‑M1/143‑31 (MQ=255)
                               cgcTGAAAAAATATTCAACGCCATCGACTTTTTATGCCTTTGCGGCATCGGGCAATGCGTCTCGGATGCGCCGTAAACGCCTTATCCGACCTACGGTTCTACCCCCGCGTAGGCGTGATAAGACGCCCCAGCCTCGCAccccg                                                                                                               <  2:1171319‑M2/143‑6 (MQ=255)
                                gcTGAAAAAATATTCAACGCCATCGACTTTTTATGCCTTTGCGGCATCGGGCAATGCGTGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGCTCTACCACTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCCTCAGGC                                                                                                              <  2:1032494‑M2/143‑1 (MQ=255)
                                    aaaacaTATTCCACGCCATCGACTTTTTATGCCTTTCCGGCATCGGGCAATGCGTGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGa                                                                                                          <  2:365083/143‑1 (MQ=255)
                                       aaaTATTCAACGCCATCGACTTTTTATGCCTTTGCGGCATCGGGCAATGCGTGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTCTACCCCTGCGTAGGCCTGATAAGACCCGCCAGCGTCGCATCAGGCAAGACCg                                                                                                       >  2:1179600/1‑143 (MQ=255)
                                          tatTCAACGCCATCGACTTTTTATGCCTTTGCGGCATCGGGCAATGCGTGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTCTACCCCTGCGTAGgcctgatgcgacgctggcgcgtcttatcaggcctacgcaggg                                                                                                    <  2:110899‑M1/143‑43 (MQ=255)
                                             tCAACGCCATCGACTTTTTATGCCTTTGCGGCATCGGGCAATGCGTGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTCTACCCCTGCGTAGgcctgatgcgacgctggcgcgtcttatcaggcctacgcaggggta                                                                                                 <  2:1120723‑M1/143‑46 (MQ=255)
                                                  gCCATCGACTTTTTATGCCTTTGCGGCATCGGGCAATGCGTGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTGTTAGCTCgg                                                                                            >  1:689532/1‑143 (MQ=255)
                                                   cgctCGACGCTTTATGCCTGTGGGGCATCGGGCAGTGCGTGTCGCATGCGGCGTAAACGCCTTATCCGACCTACGGTGCTACGCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGc                                                                                           <  1:1123692/140‑1 (MQ=37)
                                                   ccATCGACTTTTTATGCCTTTGCGGCATCGGGCAATGCGTGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCAGCAGGAAAGACCGTCTTAAGTCGGc                                                                                           >  2:650062/1‑143 (MQ=255)
                                                     aTCGACTTTTTATGCCTTTGCGGCATCGGGCAATGCGTGTCGGATGCGGCGTAAAAGCCCTATCCGACCTACGGTTCTACCCCTGCGTAGGCCTGATAAGACCCGCCAGCGTCGCATCGGGCAAGACCGCATTAATTCGGCGt                                                                                         >  1:181778/1‑143 (MQ=255)
                                                      tCGACTTTTTATGCCTTTGCGGCATCGGGCAATGCGTGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGta                                                                                        <  1:1249548/143‑1 (MQ=255)
                                                       cGACTTTTTATGCCTTTGCGGCATCGGGCAATGCGTGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGGCGCATCAGGCAAGACCGTATTAATTCGGCGtat                                                                                       <  1:152596/143‑1 (MQ=255)
                                                          cTTTTTATGCCTTTGCGGCATCGGGCGATGCGTGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGTATAGc                                                                                    <  2:616458/143‑1 (MQ=255)
                                                           tttttATGCCTTTGCGTCATCGGGCAATGCGTGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTCTACCCCTGCGTAGGCCTGAGAAGACGCGCCGGCGGCGCATCAGGGAAAACCGTCTTAACTCGGCGTATGGca                                                                                   >  2:584928/1‑142 (MQ=37)
                                                           tttttAGGCCTTGGCGGCGTCGGGCAGTGCGTGTCGGGTGCGGCGTGAGCGCCTTGCCCGACCTCCGGGTCTACCCCGGCGTAGGCCTGTTAAGACGCGCCAGCGGCGCATCAGGCAAGACCGTATTAAGTCGGCGTATAGcc                                                                                   <  2:189832/143‑1 (MQ=255)
                                                             tttATGCCTTTGCGGCATCGGGTAATGCGTGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGTATAGCCCa                                                                                 <  1:783620/143‑1 (MQ=255)
                                                                    cTTTGCGGCATCGGGCAATGCGTGTCGTATGCGGCGTAAACGCCGTATCCGACCTACGGTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGTATAGCCCATTACCAc                                                                          <  2:171902/143‑1 (MQ=255)
                                                                    cTTTGCGGCATCGGGCAATGCGTGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCACGCAAGACCGTATTAATGCGGCGTATACCGCATTACCAc                                                                          >  2:888000/1‑143 (MQ=255)
                                                                     tttGCGGCATCGGGCAATGCGTGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGTATAGCCCATTACCACg                                                                         >  1:717748/1‑143 (MQ=255)
                                                                      ctGCGGCATCGCGCAATGCGGGTCGGACGCGGCGTAAACGCCTTATCCGACCTACGGTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGTATAGCCCATTACCACGc                                                                        <  2:1009913/142‑1 (MQ=255)
                                                                              tCGGGCAATGCGTGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGTATAGCCCATTACCACGCCACTTAAg                                                                <  2:548426/143‑1 (MQ=255)
                                                                               cGGGCAATGCGTGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGTATAGCCCATTACCACGCCACTTAAGc                                                               <  2:855721/143‑1 (MQ=255)
                                                                                gcgCAATCCGTGTCGGACGCGGCGTAAACGCCTTATCCGACCTACGGTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGATCCTATTAATTCTTCGTATAGCCCATTCCCACGCCACTTAAGcc                                                              <  1:661587/141‑1 (MQ=37)
                                                                                  gCAATGCGTGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGTATAGCCCATTACCACGCCACTTAAGCCAg                                                            <  1:1087762/143‑1 (MQ=255)
                                                                                  gCAAGGCGGGTCGGATGCGGCGCAAACGCCTTATCCGGCCTACGGTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGTATAGCCCATTACCACGCCACTTAAGCCAg                                                            <  1:421511/143‑1 (MQ=255)
                                                                                         gtgtCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGTATAGCCCATTACCACGCCACTTAAGCCAGAAAGTTg                                                     >  1:1118167/1‑143 (MQ=255)
                                                                                            tCGGATGCGGCGTCAACGCCGCACCCCACCGACGGCTCTCCCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGTCTAGCCCATTACCCCGCCACTTAAGCCAGAAAGTTGCtt                                                  <  1:500507/143‑1 (MQ=37)
                                                                                            tCGGATGCCGCGTAAACGCCTTATCCGACCTGCGGTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGTATAGCCCATTACCACGCCACTTAAGCCAGAAAGTTGCtt                                                  <  2:50420/143‑1 (MQ=255)
                                                                                               gATGCGGCGTAAACGCGTTCCGCGACCTACGGTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGTATAGCCCATTACCACGCCACTTAAGCCAGAAAGTTGCTTCaa                                               <  2:1169650/143‑1 (MQ=255)
                                                                                                aTGCGGCGTAACCGCCTTATCCGACCTACGGTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGTATAGCCCATTACCACGCCACTTAAGCCAGAAAGTTGCTTCAAc                                              <  1:391899/143‑1 (MQ=255)
                                                                                                  gcggcgTAAACGCCTTATCCGACCTACGGTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGTATAGCCCATTACCACGCCACTTAAGCCAGAAAGTTGCTTCAACTc                                            <  1:320109/143‑1 (MQ=255)
                                                                                                    ggcgacaaCGCCGTATCCGACCTACGGTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGTATAGCCCATTACCACGCCACTTAAGCCAGAAAGTTGCTTCAACTCAc                                          <  1:196255/137‑1 (MQ=255)
                                                                                                      cctAAACGCCTTATCCGACCTACGGTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGTATAGCCCATTACCACGCCACTTAAGCCAGAAAGTTGCTTCAACTCAccc                                        <  2:37383/141‑1 (MQ=255)
                                                                                                         agaCGCCGTAGCCGACCTACGGTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTACTAAGTCGGCGTATAGCCCATTACCACGCCACTTAAGCCCGAAAGTAGCATCAACTCACCCAGc                                     <  2:395998/141‑1 (MQ=38)
                                                                                                         aaaCGCCTTATCCGACCTACGGTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCACGACCGTATTAATCCGGCGTATAGCCCATTACCACGCCACTTAAGCCAGAAAGTGGCGTCAACTCACCCAGc                                     >  2:259434/1‑143 (MQ=255)
                                                                                                          aaCGCCTTATCCGACCTACGTTTCTACCCCTCCGTAGGCCTGATAAGGCGCTCTATCGTTGCCCCCGGCACGACCGTATTACTTCGGCGTATAGCCCATTACCACGCCACTTAAGCCAGAAAGTTGCTTCAACTCACCCAGCg                                    <  2:566972/143‑1 (MQ=255)
                                                                                                                ttATCCGACCTACGGTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCCTCAGGCCAGACCGTATTAATTCGGCGTATAGCCCATTACCACGCCACTTAAGCCAGAAAGTTGCTTCAACTCACCCAGCGAACCtt                              >  1:1230521/1‑143 (MQ=255)
                                                                                                                ttATCCGACCTACGGTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGTATAGCCCATTACCACGCCACTTAAGCCAGCAAGTTGCTTCAACTCACCCAGccctctgt                              >  1:924206/1‑136 (MQ=255)
                                                                                                                ttATCCGACCTACGGTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGTATAGCCCATTACCACGCCACTTAAGCCAGAAAGTTGCTTCAACTCACCCAGCGAACCtt                              >  1:336487/1‑143 (MQ=255)
                                                                                                                 tATCCGTCCTACGGTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGTATAGCCCATTACCACGCCACTTAAGCCAGAAAGTTGCTTCAACTCACCCAGCGAACCttt                             <  1:527288/143‑1 (MQ=255)
                                                                                                                    ccGACCTACGGTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGTATAGCCCATTACCACGCCGCTTAAGCCAGAAAGTTGCTTCAACTCACCCAGCGCACCttgaag                          >  1:198768/1‑139 (MQ=255)
                                                                                                                     cGACCTACGGTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTGGGCGGATAGCCAATTAGCACACCAGATAAGCCAGTAAGTTGCTTCCACACACCCAGCGAACCTTTCacc                         >  2:446896/1‑141 (MQ=37)
                                                                                                                         cTACGGTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCACCTCAGGCAAGACCGTATTAATTCGGCGTATAGCCCATTACCACGCCACTTAAGCCAGAAAGTTGCTTCAACTCACCCAGCGAACCTCTCAGCTTac                     >  2:721117/1‑142 (MQ=255)
                                                                                                                          tACGGTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGTATAGCCCATTACCACGCCACTTAAGCCAGAAAGTTGCTTCAACTCACCCAGCGAACCTTTCAGCTTATc                    >  1:999326/1‑143 (MQ=255)
                                                                                                                           aCGGTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGTATAGCCCATTACCACGCCACTTAAGCCAGAAAGTTGCTTCAACTCACCCAGCGAACCTTTCAGCTTATCt                   >  2:69810/1‑143 (MQ=255)
                                                                                                                             ggTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGTATAGCCCATTACCACGCCACTTAAGCCAGCAATGTGACTCACCTCACCCAGCGAACCTTTCAACTTATCctt                 >  1:505898/1‑143 (MQ=38)
                                                                                                                               ttCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGTATAGCCCATTACCACGCCACTTAAGCCAGAAAGTTGCTTCAACTCACCCAGCGAACCTTTCAGCTTATCTTTCg               >  1:815039/1‑143 (MQ=255)
                                                                                                                                tcgcccccTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGTATAGCCCATTACCACGCCACTTAAGCCAGAAAGTTGCTTCAACTCACCCAGCGAACCTTTCAGCTTATCTTTCGa              <  2:644893/139‑1 (MQ=255)
                                                                                                                                tCTACCCCTGCGTAGGCCTGATAAGACGCGCCCGCGTCGCATCAGCCAAGACCGTATTAATTCGGCGTATAGCCCATTACCACGCCACTTAAGCCAGAAAGTTGCTTCAACTCACCCAGCGAACCTTTCAGCTTATCTTTCGa              <  1:248818/143‑1 (MQ=255)
                                                                                                                                  tACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCctacgcaggggtagaaccgtaggtcggataaggcgtttacgccgcatccgacacgcattgcccgatgccgcaaaggcataaaaagtcgatggcgttga            <  2:1120723‑M2/143‑99 (MQ=255)
                                                                                                                                  tACCCCTGCGTAGGACTGCTTATTCTGTTCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGTATAGCCCATTACCACGCCACTTAAGCCAGAAAGTTGCTTCAACTCACCCAGCGGACCGTACAGCCTAACGTTCgcag            >  2:780508/1‑140 (MQ=255)
                                                                                                                                    ccccTGCGTAGGCCTGATAAGACGCGCAAGCGTCGCATCACGCAAGACCGTATTATTTCCGCGTATAGCCCATTACCACGCCACTTCAGCCAGAAAGTTGCTTCAACTCACCCACCGCACCCTTCGCCCTCGCTTTCGAGCCa          >  2:589165/1‑143 (MQ=25)
                                                                                                                                     cccTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCctacgcaggggtagaaccgtaggtcggataaggcgtttacgccgcatccgacacgcattgcccgatgccgcaaaggcataaaaagtcgatggcgttgaata         <  2:110899‑M2/143‑102 (MQ=255)
                                                                                                                                     cccTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGTATAGCCCATTACCACGTCACGGAAGCCAGAACGTTGCTTCCACTCACCCAGCGAACCTTCCAGCTTAGCTTCCGACGcct         >  1:174325/1‑141 (MQ=37)
                                                                                                                                      ccTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGTATAGCCCATTACCACGCCACTTAAGCCAGAAAGTTGCTTCAACTCACCCAGCGAACCTTTCAGCTTATCTTTCGAGGCAtg        >  1:768580/1‑142 (MQ=255)
                                                                                                                                      ccTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGTATAGCCCATTACCACGCCACTTAAGCCAGAAAGTTGCTTCAACTCACCCAGCGAACCTTTCAGCTTATCTTTCGAGGCAta        >  1:487080/1‑142 (MQ=255)
                                                                                                                                            tAGGCCTGATAAGACGCGCCAGTGTCGCATCAGGCAAGACCGTATTAATTCGGCGTATAGCCCATTACCACGCCACTTAAGCCAGAAAGTTGCTTCAACTCAcc                                         <  2:494369/104‑1 (MQ=255)
                                                                                                                                            tAGGCCTGATAAGACGCGCCAGTGTCGCATCAGGCAAGACCGTATTAATTCGGCGTATAGCCCATTACCACGCCACTTAAGCCAGAAAGTTGCTTCAACTCAcc                                         >  1:494369/1‑104 (MQ=255)
                                                                                                                                            tAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGTATAGCCCATTACCACGCCACTTAAGCCAGAAAGTTGCTTCAACTCACCCAGCGAACCTTTCAGCTTATCTTTCGAGGCATCCGGccc  >  1:278365/1‑143 (MQ=255)
                                                                                                                                              |                                                                                                                                            
GGATTTCCTTCCCGCGCATCAATAAAAATGGCGCTGAAAAAATATTCAACGCCATCGACTTTTTATGCCTTTGCGGCATCGGGCAATGCGTGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGTATAGCCCATTACCACGCCACTTAAGCCAGAAAGTTGCTTCAACTCACCCAGCGAACCTTTCAGCTTATCTTTCGAGGCATCCGGCCC  >  NC_000913/2430838‑2431120

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.