New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 2430980NA (NA)4 (0.060) 3/250 NT NA noncoding (34/36 nt) other REP169b
?NC_000913 = 2431012 NA (NA)noncoding (2/36 nt) other REP169b

GCTGAAAAAATATTCAACGCCATCGACTTTTTATGCCTTTGCGGCATCGGGCAATGCGTGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGTATAGCCCATTACCACGCCACTTAAGCCAGAAAGTTGCTTCAACTCACCCAGCGAACCTTTCAGCTTATCTTTCGAGGCATCCGGCCCAACCAGAATACGGGTAATTTTACCCTGCACTGGC  >  NC_000913/2430870‑2431154
                                                                                                                                              |                                                                                                                                              
gcTGAAAAAATATTCAACGCCATCGACTTTTTATGCCTTTGCGGCATCGGGCAATGCGTGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGCTCTACCACTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCCTCAGGC                                                                                                                                                <  2:1032494‑M2/143‑1 (MQ=255)
    aaaacaTATTCCACGCCATCGACTTTTTATGCCTTTCCGGCATCGGGCAATGCGTGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGa                                                                                                                                            <  2:365083/143‑1 (MQ=255)
       aaaTATTCAACGCCATCGACTTTTTATGCCTTTGCGGCATCGGGCAATGCGTGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTCTACCCCTGCGTAGGCCTGATAAGACCCGCCAGCGTCGCATCAGGCAAGACCg                                                                                                                                         >  2:1179600/1‑143 (MQ=255)
                  gCCATCGACTTTTTATGCCTTTGCGGCATCGGGCAATGCGTGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTGTTAGCTCgg                                                                                                                              >  1:689532/1‑143 (MQ=255)
                   cgctCGACGCTTTATGCCTGTGGGGCATCGGGCAGTGCGTGTCGCATGCGGCGTAAACGCCTTATCCGACCTACGGTGCTACGCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGc                                                                                                                             <  1:1123692/140‑1 (MQ=37)
                   ccATCGACTTTTTATGCCTTTGCGGCATCGGGCAATGCGTGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCAGCAGGAAAGACCGTCTTAAGTCGGc                                                                                                                             >  2:650062/1‑143 (MQ=255)
                     aTCGACTTTTTATGCCTTTGCGGCATCGGGCAATGCGTGTCGGATGCGGCGTAAAAGCCCTATCCGACCTACGGTTCTACCCCTGCGTAGGCCTGATAAGACCCGCCAGCGTCGCATCGGGCAAGACCGCATTAATTCGGCGt                                                                                                                           >  1:181778/1‑143 (MQ=255)
                      tCGACTTTTTATGCCTTTGCGGCATCGGGCAATGCGTGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGta                                                                                                                          <  1:1249548/143‑1 (MQ=255)
                       cGACTTTTTATGCCTTTGCGGCATCGGGCAATGCGTGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGGCGCATCAGGCAAGACCGTATTAATTCGGCGtat                                                                                                                         <  1:152596/143‑1 (MQ=255)
                          cTTTTTATGCCTTTGCGGCATCGGGCGATGCGTGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGTATAGc                                                                                                                      <  2:616458/143‑1 (MQ=255)
                           tttttATGCCTTTGCGTCATCGGGCAATGCGTGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTCTACCCCTGCGTAGGCCTGAGAAGACGCGCCGGCGGCGCATCAGGGAAAACCGTCTTAACTCGGCGTATGGca                                                                                                                     >  2:584928/1‑142 (MQ=37)
                           tttttAGGCCTTGGCGGCGTCGGGCAGTGCGTGTCGGGTGCGGCGTGAGCGCCTTGCCCGACCTCCGGGTCTACCCCGGCGTAGGCCTGTTAAGACGCGCCAGCGGCGCATCAGGCAAGACCGTATTAAGTCGGCGTATAGcc                                                                                                                     <  2:189832/143‑1 (MQ=255)
                             tttATGCCTTTGCGGCATCGGGTAATGCGTGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGTATAGCCCa                                                                                                                   <  1:783620/143‑1 (MQ=255)
                                    cTTTGCGGCATCGGGCAATGCGTGTCGTATGCGGCGTAAACGCCGTATCCGACCTACGGTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGTATAGCCCATTACCAc                                                                                                            <  2:171902/143‑1 (MQ=255)
                                    cTTTGCGGCATCGGGCAATGCGTGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCACGCAAGACCGTATTAATGCGGCGTATACCGCATTACCAc                                                                                                            >  2:888000/1‑143 (MQ=255)
                                     tttGCGGCATCGGGCAATGCGTGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGTATAGCCCATTACCACg                                                                                                           >  1:717748/1‑143 (MQ=255)
                                      ctGCGGCATCGCGCAATGCGGGTCGGACGCGGCGTAAACGCCTTATCCGACCTACGGTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGTATAGCCCATTACCACGc                                                                                                          <  2:1009913/142‑1 (MQ=255)
                                              tCGGGCAATGCGTGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGTATAGCCCATTACCACGCCACTTAAg                                                                                                  <  2:548426/143‑1 (MQ=255)
                                               cGGGCAATGCGTGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGTATAGCCCATTACCACGCCACTTAAGc                                                                                                 <  2:855721/143‑1 (MQ=255)
                                                gcgCAATCCGTGTCGGACGCGGCGTAAACGCCTTATCCGACCTACGGTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGATCCTATTAATTCTTCGTATAGCCCATTCCCACGCCACTTAAGcc                                                                                                <  1:661587/141‑1 (MQ=37)
                                                  gCAATGCGTGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGTATAGCCCATTACCACGCCACTTAAGCCAg                                                                                              <  1:1087762/143‑1 (MQ=255)
                                                  gCAAGGCGGGTCGGATGCGGCGCAAACGCCTTATCCGGCCTACGGTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGTATAGCCCATTACCACGCCACTTAAGCCAg                                                                                              <  1:421511/143‑1 (MQ=255)
                                                         gtgtCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGTATAGCCCATTACCACGCCACTTAAGCCAGAAAGTTg                                                                                       >  1:1118167/1‑143 (MQ=255)
                                                            tCGGATGCGGCGTCAACGCCGCACCCCACCGACGGCTCTCCCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGTCTAGCCCATTACCCCGCCACTTAAGCCAGAAAGTTGCtt                                                                                    <  1:500507/143‑1 (MQ=37)
                                                            tCGGATGCCGCGTAAACGCCTTATCCGACCTGCGGTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGTATAGCCCATTACCACGCCACTTAAGCCAGAAAGTTGCtt                                                                                    <  2:50420/143‑1 (MQ=255)
                                                               gATGCGGCGTAAACGCGTTCCGCGACCTACGGTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGTATAGCCCATTACCACGCCACTTAAGCCAGAAAGTTGCTTCaa                                                                                 <  2:1169650/143‑1 (MQ=255)
                                                                aTGCGGCGTAACCGCCTTATCCGACCTACGGTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGTATAGCCCATTACCACGCCACTTAAGCCAGAAAGTTGCTTCAAc                                                                                <  1:391899/143‑1 (MQ=255)
                                                                  gcggcgTAAACGCCTTATCCGACCTACGGTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGTATAGCCCATTACCACGCCACTTAAGCCAGAAAGTTGCTTCAACTc                                                                              <  1:320109/143‑1 (MQ=255)
                                                                    ggcgacaaCGCCGTATCCGACCTACGGTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGTATAGCCCATTACCACGCCACTTAAGCCAGAAAGTTGCTTCAACTCAc                                                                            <  1:196255/137‑1 (MQ=255)
                                                                      cctAAACGCCTTATCCGACCTACGGTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGTATAGCCCATTACCACGCCACTTAAGCCAGAAAGTTGCTTCAACTCAccc                                                                          <  2:37383/141‑1 (MQ=255)
                                                                         agaCGCCGTAGCCGACCTACGGTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTACTAAGTCGGCGTATAGCCCATTACCACGCCACTTAAGCCCGAAAGTAGCATCAACTCACCCAGc                                                                       <  2:395998/141‑1 (MQ=38)
                                                                         aaaCGCCTTATCCGACCTACGGTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCACGACCGTATTAATCCGGCGTATAGCCCATTACCACGCCACTTAAGCCAGAAAGTGGCGTCAACTCACCCAGc                                                                       >  2:259434/1‑143 (MQ=255)
                                                                          aaCGCCTTATCCGACCTACGTTTCTACCCCTCCGTAGGCCTGATAAGGCGCTCTATCGTTGCCCCCGGCACGACCGTATTACTTCGGCGTATAGCCCATTACCACGCCACTTAAGCCAGAAAGTTGCTTCAACTCACCCAGCg                                                                      <  2:566972/143‑1 (MQ=255)
                                                                                ttATCCGACCTACGGTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCCTCAGGCCAGACCGTATTAATTCGGCGTATAGCCCATTACCACGCCACTTAAGCCAGAAAGTTGCTTCAACTCACCCAGCGAACCtt                                                                >  1:1230521/1‑143 (MQ=255)
                                                                                ttATCCGACCTACGGTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGTATAGCCCATTACCACGCCACTTAAGCCAGCAAGTTGCTTCAACTCACCCAGccctctgt                                                                >  1:924206/1‑136 (MQ=255)
                                                                                ttATCCGACCTACGGTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGTATAGCCCATTACCACGCCACTTAAGCCAGAAAGTTGCTTCAACTCACCCAGCGAACCtt                                                                >  1:336487/1‑143 (MQ=255)
                                                                                 tATCCGTCCTACGGTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGTATAGCCCATTACCACGCCACTTAAGCCAGAAAGTTGCTTCAACTCACCCAGCGAACCttt                                                               <  1:527288/143‑1 (MQ=255)
                                                                                    ccGACCTACGGTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGTATAGCCCATTACCACGCCGCTTAAGCCAGAAAGTTGCTTCAACTCACCCAGCGCACCttgaag                                                            >  1:198768/1‑139 (MQ=255)
                                                                                     cGACCTACGGTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTGGGCGGATAGCCAATTAGCACACCAGATAAGCCAGTAAGTTGCTTCCACACACCCAGCGAACCTTTCacc                                                           >  2:446896/1‑141 (MQ=37)
                                                                                         cTACGGTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCACCTCAGGCAAGACCGTATTAATTCGGCGTATAGCCCATTACCACGCCACTTAAGCCAGAAAGTTGCTTCAACTCACCCAGCGAACCTCTCAGCTTac                                                       >  2:721117/1‑142 (MQ=255)
                                                                                          tACGGTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGTATAGCCCATTACCACGCCACTTAAGCCAGAAAGTTGCTTCAACTCACCCAGCGAACCTTTCAGCTTATc                                                      >  1:999326/1‑143 (MQ=255)
                                                                                           aCGGTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGTATAGCCCATTACCACGCCACTTAAGCCAGAAAGTTGCTTCAACTCACCCAGCGAACCTTTCAGCTTATCt                                                     >  2:69810/1‑143 (MQ=255)
                                                                                             ggTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGTATAGCCCATTACCACGCCACTTAAGCCAGCAATGTGACTCACCTCACCCAGCGAACCTTTCAACTTATCctt                                                   >  1:505898/1‑143 (MQ=38)
                                                                                               ttCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGTATAGCCCATTACCACGCCACTTAAGCCAGAAAGTTGCTTCAACTCACCCAGCGAACCTTTCAGCTTATCTTTCg                                                 >  1:815039/1‑143 (MQ=255)
                                                                                                tcgcccccTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGTATAGCCCATTACCACGCCACTTAAGCCAGAAAGTTGCTTCAACTCACCCAGCGAACCTTTCAGCTTATCTTTCGa                                                <  2:644893/139‑1 (MQ=255)
                                                                                                tCTACCCCTGCGTAGGCCTGATAAGACGCGCCCGCGTCGCATCAGCCAAGACCGTATTAATTCGGCGTATAGCCCATTACCACGCCACTTAAGCCAGAAAGTTGCTTCAACTCACCCAGCGAACCTTTCAGCTTATCTTTCGa                                                <  1:248818/143‑1 (MQ=255)
                                                                                                  tACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCctacgcaggggtagaaccgtaggtcggataaggcgtttacgccgcatccgacacgcattgcccgatgccgcaaaggcataaaaagtcgatggcgttga                                              <  2:1120723‑M2/143‑99 (MQ=255)
                                                                                                  tACCCCTGCGTAGGACTGCTTATTCTGTTCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGTATAGCCCATTACCACGCCACTTAAGCCAGAAAGTTGCTTCAACTCACCCAGCGGACCGTACAGCCTAACGTTCgcag                                              >  2:780508/1‑140 (MQ=255)
                                                                                                    ccccTGCGTAGGCCTGATAAGACGCGCAAGCGTCGCATCACGCAAGACCGTATTATTTCCGCGTATAGCCCATTACCACGCCACTTCAGCCAGAAAGTTGCTTCAACTCACCCACCGCACCCTTCGCCCTCGCTTTCGAGCCa                                            >  2:589165/1‑143 (MQ=25)
                                                                                                     cccTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCctacgcaggggtagaaccgtaggtcggataaggcgtttacgccgcatccgacacgcattgcccgatgccgcaaaggcataaaaagtcgatggcgttgaata                                           <  2:110899‑M2/143‑102 (MQ=255)
                                                                                                     cccTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGTATAGCCCATTACCACGTCACGGAAGCCAGAACGTTGCTTCCACTCACCCAGCGAACCTTCCAGCTTAGCTTCCGACGcct                                           >  1:174325/1‑141 (MQ=37)
                                                                                                      ccTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGTATAGCCCATTACCACGCCACTTAAGCCAGAAAGTTGCTTCAACTCACCCAGCGAACCTTTCAGCTTATCTTTCGAGGCAtg                                          >  1:768580/1‑142 (MQ=255)
                                                                                                      ccTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGTATAGCCCATTACCACGCCACTTAAGCCAGAAAGTTGCTTCAACTCACCCAGCGAACCTTTCAGCTTATCTTTCGAGGCAta                                          >  1:487080/1‑142 (MQ=255)
                                                                                                            tAGGCCTGATAAGACGCGCCAGTGTCGCATCAGGCAAGACCGTATTAATTCGGCGTATAGCCCATTACCACGCCACTTAAGCCAGAAAGTTGCTTCAACTCAcc                                                                           <  2:494369/104‑1 (MQ=255)
                                                                                                            tAGGCCTGATAAGACGCGCCAGTGTCGCATCAGGCAAGACCGTATTAATTCGGCGTATAGCCCATTACCACGCCACTTAAGCCAGAAAGTTGCTTCAACTCAcc                                                                           >  1:494369/1‑104 (MQ=255)
                                                                                                            tAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGTATAGCCCATTACCACGCCACTTAAGCCAGAAAGTTGCTTCAACTCACCCAGCGAACCTTTCAGCTTATCTTTCGAGGCATCCGGccc                                    >  1:278365/1‑143 (MQ=255)
                                                                                                                ccTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGTATAGCCCATTACCACGCCACTTAAGCCAGAAAGTTGCTTCAACTCACCCAGCGAACCTTTCAGCTTATCTTTCGAGGCATCCGGCCCAAcc                                >  2:1118690/1‑143 (MQ=255)
                                                                                                                 cTGATAAGACGCGCCAGCGTCGCATCAGGCctacgcaggggtagaaccgtaggtcggataaggcgtttacgccgcatccgacacgcattgcccgctgccgcaacggcataaaacgtcgctggcgttgcatattttttcagcgc                               <  1:175079‑M2/143‑114 (MQ=255)
                                                                                                                 cTGATAAGACGCGCCAGCGTCGCATCAGGCctacgcaggggtagaaccgtaggtcggataaggcgtttacgccgcatccgacacgcattgcccgatgccgcaaaggcataaaaagtcgatggcgttgaatattttttcagcgc                               <  2:527291‑M2/143‑114 (MQ=255)
                                                                                                                    aTAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGTATAGCCCATTACCACGCCACTTAAGCCAGAAAGTTGCTTCAACTCAACCAGCGAACCTTTCAGCTTATCTTTCGAGGCATCCGGCCCAACCAGaa                            >  2:566291/1‑143 (MQ=255)
                                                                                                                         gcgcgCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGTATAGCCCATTACCACGCCACTTAAGCCAGAAAGTTGCTTCAACTCACCCAGCGAACCTTTCAGCTTATCTTTCGAGGCATCCGGCCCAACCAGAATACgg                       <  2:1071930/142‑1 (MQ=255)
                                                                                                                               cAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGTATCGCCCATTAGCCCGCCACTTAAGCCAGATAGTTGCTTCAACTCACCCAGCGAACCTTTCAGCTTATCTTTCGGTGCATCCGCCCCACCCAGCATACGGGTAAtt                 >  1:361316/1‑143 (MQ=255)
                                                                                                                               cAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGTATAGCCCATTACCACGCCACTTAAGCCAGAAAGTTGCTTCAACTCACCCAGCGAACCTTTCAGCTTATCTTTCGAGGCATCCGGCCCAACCAGAATACGGGTAAtt                 <  1:69810/143‑1 (MQ=255)
                                                                                                                                  cGTCGCATCAGGCAAGACCGTATTAATTCGGCGTATAGCCCATTACCACGCCACTTAAGCCAGAAAGTTGCTTCAACTCACCCAGCGAACCTTTCAGCTTATCTTTCGAGGCATCCGGCCCAACCAGAATACGGGTAATTTTa              <  1:706656/143‑1 (MQ=255)
                                                                                                                                  cGTCGCATCAGGCAAGACCGTATTAATTCGGCGTATAGCCCATTACCACGCCACTTAAGCCAGAAAGTTGCTTCAACTCACCCAGCGAACCTTTCAGCTTATCTTTCGAGGCATCCGGCCCAACCAGAATACGGGTAATTTTa              <  1:1032494/143‑1 (MQ=255)
                                                                                                                                        aTCAGGCctacgcaggggtagaaccgtaggtcggataaggcgtttacgccgcatccgacacgcattgcccgatgccgcaaaggcataaaaagtcgatggcgttgaatattttttcagcgccatttttattgatgcgcgggaag        <  2:978211‑M2/143‑137 (MQ=255)
                                                                                                                                        aTCAGGCctacgcagggctagaaccgtaggtctgttaaggcgtttacgccgcatccgacacgcattgcccgatgccgcaaaggcataaaaagtcgatggcgttgaatattttttcagcgccatttttattgatgcgcgggaag        >  1:532271‑M2/1‑7 (MQ=255)
                                                                                                                                        aTCAGGCAAGACCGTATTAATTCGGCGTATAGCCCATTACCACGCCACTTAAGCCAGAAAGTTGCTTCAACTCACCCAGCGAACCTTTCAGCTTATCTTTCGAGGCATCCGGCCCAACCAGAATACGCGTAATTTTACCCTGc        >  2:121454/1‑143 (MQ=255)
                                                                                                                                           aGGCctacgcaggggtagaaccgtaggtcggataaggcgtttacgccgcatccgacacgcattgcccgatgccgcaaaggcataaaaagtcgatggcgttgaatattttttcagcgccatttttattgatgcgcgggaaggaa     <  1:1277885‑M2/143‑140 (MQ=255)
                                                                                                                                           aGGCAAGACCGTATTAATTCGGCGTATAGCCCATTACCACGCCACTTAAGCCAGAAAGTTGCTTCGACTCACCCAGCGAACCTTTCAGCTTATCTTTCGAGGCCTCCGGCCCAACCAGCATACGGGTACTTATACCCTCCACt     >  2:1259192/1‑143 (MQ=255)
                                                                                                                                              cctacgcaggggtagaaccgtaggtcggataaggcgtttacgccgcatccgacacgcattgcccgatgccgcaaaggcataaaaagtcgatggcgttgaatattttttcagcgccatttttattgatgcgcgggaaggaaatc  >  2:1270611‑M2/1‑1 (MQ=255)
                                                                                                                                              |                                                                                                                                              
GCTGAAAAAATATTCAACGCCATCGACTTTTTATGCCTTTGCGGCATCGGGCAATGCGTGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGTATAGCCCATTACCACGCCACTTAAGCCAGAAAGTTGCTTCAACTCACCCAGCGAACCTTTCAGCTTATCTTTCGAGGCATCCGGCCCAACCAGAATACGGGTAATTTTACCCTGCACTGGC  >  NC_000913/2430870‑2431154

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.