| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 546199 = | 41 (0.620) | 3 (0.050) | 3/258 | NT | 7.1% | coding (165/1050 nt) | allD | ureidoglycolate dehydrogenase |
| ? | NC_000913 | 546229 = | 38 (0.590) | coding (135/1050 nt) | allD | ureidoglycolate dehydrogenase | |||||
ATTTTCGCCGCGACCTGTCCGGCGGCATTGTCGGCATGTAAAATTGCCGAGCACGGCCCGGTTTCCTCAAGACGAAACTCCGGTTCGCGGTTGGTGCCGCCTTTTGAAATGCGTTCCGCGTAGTATTCCACGCGCACCGCGCCATGAGAGTGGATCCCTCTGGCATCGGCGTAAACCAATACTTCAGCCACGGTTGCAGCGTGCTCACGTTTTAACCCAGCCTGGCAGAGTTTATTCTCAATTAGCTGGTGGAGTGTTTCCCGACTGATTTTCATCTGTC > NC_000913/546089‑546368 | aTTTCCCCCGCTACCTGTCCGGCGGCATTGCCGGCATGTAACATCGCCGAGCACGGCCCGGTTTCCTCAAGACGAATCTCCGGTCCGCGGTTGGCGCCGCCTTTTGAAATGCGTTCCGCGTAGTATTCCACGCGCACCGCGcc < 2:1035795/143‑1 (MQ=255) tCGCCGCGACCTGTCCGGCGGCATTGTCGGCATGTAAAATTGCCGAGCACGGCCCGGTTTCCTCAAGACGAAACTCCGGTTCGCGGTTGGTGCCGCCTTTTGAAATGCGTTCCGCGTAGTATTCCACGCGCACCGCGCCATga < 1:1109215/143‑1 (MQ=255) ccgcGACCTGTCCGGCGGCATTGTCGGCATGTAAAGTTGCCGAGCACGGCCCGGTTTCCTCAAGCCGAAGCTCCGGTTCGCGGTTGGTGCCGCCTTTTGAAATGCGTTCCGCGTAGTATTCCACGCGCACCGCGCCATGagag < 2:826451/143‑1 (MQ=255) cgcgCCCTGTCCCGCGGCATTGTCGGCATGTAACGTGGCCGGGCACGGCCCGGTTTCCTCAAGACGACACTCCGGTTCGCGGTTGGTGCCGCCTTTTGAAATGCGTTCCGCGTAGTATTCCACGCGCACCGCGCCATGAGAGt < 2:361408/143‑1 (MQ=255) gcgACCTGGCCGGCGGCATTGTCGGCATGTAAAATTGCCGAGCACGGCCCGGTTTCCTCAAGACGAAACTCCGGTTCGCGGTTGGTGCCGCCTTTTGAAATGCGTTCCGCGTAGTATTCCACGCGCACCGCGCCATGAGAGTg < 2:242329/143‑1 (MQ=255) cTGTCCGGCGGCATTGTCGGCATGTAAAATTGCCGAGCACGGCCCGGTTTCCTCAAGACGAAACTCCGGTTCGCGGTTGGTGCCGCCTTTTGAAATGCGTTCCGCGTCGTATTCCACGCGCACCGCGCCATGAGAGTGGATcc > 1:505427/1‑143 (MQ=255) cTGTCCGGCGGCATTGTCGGCATGTAAAATTGCCGAGCACGGCCCGGTTTCCTCAAGACGAAACTCCGGTTCGCGGTTGGCGCCGCCTTTTGAAATGCGTTCCGCGTAGTATTCCACGCGCACCGCGCCATGAGAGTGGATcc > 1:1272317/1‑143 (MQ=255) gTCCGGCGGCATTGTCGGCATGTAAAATTGCCGAGCACGGCCCGGTTTCCTCAAGACGAAACTCCGGTTCGCGGTTGGTGCCGCCTTTTGAAATGCGTTCCGCGTAGTATTCCACGCGCACCGCGCCATGAGAGTGGATCCct > 1:1224986/1‑143 (MQ=255) gTCCGGCGGCATTGTCGGCATGTAAAATTGCCGAGCACGGCCCGGTTTCCTCAAGACGAAACTCCGGTTCGCGGATGGTGCCGCCTTTTGAAATGCGTTCCTCTTAGTATTCCACGCGCACCGCGCCATGAGAGTGGATCCct > 1:1210779/1‑143 (MQ=255) ccGGCGGCATTGTCGGCATGTAAAAGTGCCGAGCACGGCCCGGTTTCCTCAAGACGAAACTCCGGTTCGCGGTTGGTGCCGCCTTTTGAAATGCGTTCCGCGTAGTATTCCACGCGCACCGCGCCATGAGAGTGGATCCctct < 1:1052631/143‑1 (MQ=255) tctgccaggctgggttaaaacgtgagcacgctgcaaccgtggctgaagtattggtttacgccgatgccagagggatccactctcatggcGCGTTCCGCGTAGTATTCCACGCGCACCGCGCCATGAGAGTGGa < 2:622852‑M1/44‑1 (MQ=255) tctgccaggctgggttaaaacgtgagcacgctgcaaccgtggctgaagtattggtttacgccgatgccagagggatccactctcatggcGCGTTCCGCGTAGTATTCCACGCGCACCGCGCCATGAGAGTGGa > 1:622852‑M1/90‑133 (MQ=255) cATTCTCGGCGTGCACACTGGCCGCGCACGGCCCTGTTGCCTCAAGACGAAACTCCTGTTCGCGGTTGGTGCCGCCTTTTGAAATGCGTTCCGCGTAGTATTCCACGCGCACCGCGCCATGAGAGTGGATCCCTCTGGCATCg < 2:827887/143‑1 (MQ=255) tGTCGGCATGTAAAATTGCCGAGCACGGCCCGGTTTCCTCAAGACGAAACTCCGGTTCGCGGTTGGTGCCGCCTTTTGAAATGCGTTCCGCGTAGTATTCCACGCGCACCGCGCCATGAGAGTGGATCCCTCTGGCATCGGCg < 1:214142/143‑1 (MQ=255) tCGGCATGTAAAATTGCCGAGCACGGCCCGGTTTCCTCAAGACGAAACTCCGGTTCGCGGTTGGTGCCGCCTTTTGAAATGCGTTCCGCGTAGTATTCCACGCGCACCGCGCCATGAGAGTGGATCCCTCTGGCATCGGCGTa > 1:45784/1‑143 (MQ=255) gCATGTAAAATTGCCGAGCACGGCCCGGTTTCCTCAAGGCGAAACTCCGGTTCGCGGTTGGTGCCGCCTTTTGAAATGCGTTCCGCGTAGTATTCCACGCGCACCGCGCCATGAGAGTGGATCCCTCTGGCATCGGCGTAAAc < 2:121678/143‑1 (MQ=255) cATGTAACATTGCCGAGCACGGCCCGGTTTCCTCAAGACGAAACTCCGGCTCGCGGTGTGTGCCTCCTTTTGAAATGCGTTCCGCGTAGTATTCCACGCGCACCGCGCCATGAGAGTGGATCCCTCTGGCATCGGCGTAAAcc < 1:591820/143‑1 (MQ=255) tGTAAAATTGCCGAGCACGGCCCGGTTTCCTCAAGACGAAACTCCGGTTCGCGGTTGGTGCCGCCTTTTGAAATGCGTCCCGCGTAGTATTCCACGCGCACCGCGCCATGAGAGTGGATCCCTCTGGCATCGGCGTAAACCaa < 1:973638/143‑1 (MQ=255) ctGCCGACCACGGCCCGGTTTCCTCAAGACGAAACTCCGGTTCGCGGTTGGTGCCGCCTTTTGAAATGCGTTCCGCGTAGTATTCCACGCGCACCGCGCCATGAGAGTGGATCCCTCTGGCATCGGCGTAAACCAATACTTCa < 1:622332/142‑1 (MQ=255) tcgtcccGGTTTCCTCCAGACGAAACTCGGGGTCGCGGTGGGTGCCGCCTTTTGAAATGCGTTCCGCGTAGTAGTCCACGCGCACCGCGCCATGAGAGTGGATCCCTCTGGCATCGGCGTAAACCAATACTTCAGCCACGGtt < 1:261303/139‑1 (MQ=255) gCCCGGTTTCCTCAAGACGAAACTCCGGTTCGCGGTTGGTGCCGCCTTTTGAAATGCGTTCCGCGTAGTATTCCACGCGCACCGCGCCATGAGAGTGGATCCCTCTGCCATCGGCGTAACCCAATACTTCAGCCACGGTTGCa > 2:59895/1‑143 (MQ=255) cGGTTTCCTCAAGACGAATCTCCGGTTCGCGGTTGGTGCCGCCTTTTGAAATGCGTTCCGCGTAGTATGCCACGCGCACCGCGCCATGAGAGTGGATCCCTCTGGCATCGGCGTAAACCAATACTTCAGCCACGGTTGCAGCg < 2:1173015/143‑1 (MQ=255) tCAAGACGAAACTCCGGTTCGCGGTTGGTGCCGCCTTTTGAAATGCGTTCCGCGTAGTATTCCACGCGCACCGCGCCATGAGAGTGGATCCCTCTGGCATCGGCGTAAACCAATACTTCAGCCACGGTTGCAGCGTGCTCACg > 2:843115/1‑143 (MQ=255) aaGACGAAACTCCGGTTCGCGGTTGGTGCCGCCTTTTGAAATGCGTTCCGCGTAGTATTCCACGCGCACCGCGCCATGAGAGTGGATCCCTCTGGCATCGGCGTAAACCAATACTTCAGCCACGGTTGCAGCGTGCTCACGtt > 1:886882/1‑143 (MQ=255) aaGACGAAACTCCGGTTCGCGGTTGGTGCCGCCTTTTGAAATGCGTTCCGCGTAGTATTCCACGCGCACCGCGCCATGAGAGTGGATCCCTCTGGCATCGGCGTAAACCAATACTTCAGCCACGGTTGCAGCGTGCACACGtt > 2:732414/1‑143 (MQ=255) aaGACGAAACTCCGGTTCGCGGTTGGTGCCGCCTTTTGAAATGCGTTCAGCGTAGTATTCCACGCGCACCGCGCCATGAGAGTGGATCCCTCTGGCGTCGGCGTAAACCAATACTGCAGCCACGGTTGCAGCGTGCTCACGtg > 1:971950/1‑142 (MQ=255) tCCGGTTCGCGGTTGGTGCCGCCTTTTGAAATGCGTTCCGCGTAGTATTCCACGCGCACCGCGCCATGAGAGTGGATCCCTCTGGCATCGGCGTAAACCAATACTTCAGCCACGGTTGCAGCGTGCTCGCGTTTTAACCCAGc > 1:215176/1‑143 (MQ=255) tCCGGTTCGCGGTTGGTGCCGCCTTTTGAAATGCGTTCCGCGTAGTATTCCACGCGCACCGCGCCATGAGAGTGGATCCCTCTGGCATCGGCGTAAACCAATACTTCAGCCACGGTTGCAGCGTGCTCACGTTTTAACCCCGc > 1:1229959/1‑143 (MQ=255) gTTCGCGGTTGGTGCCGCCTTTTGACATGCGTTCCGCGTAGTATTCCACGCGCACCGCGCCATGAGAGTGGATCCCTCTGGCATCGGCGTAAACCAATACTTCAGCCACGGTTGCAGCGTGCTCACGTTTTAACCCAGCCTgg < 2:488580/143‑1 (MQ=255) ttGGTGCCGCCTTTTGAAATGCGTTCCGCGTAGTATTCCACGCGCACCGCGCCATGAGAGTGGATCCCTCTGGCATCGGCGTAAACCAATACTTCAGCCACGGTTGCAGCGTGCTCACGTTTTAACCCAGCCTGGCAGAGttt > 1:451076/1‑143 (MQ=255) tGGTGCCGCCTTTTGAAATGCGTTCCGCGTAGTATTCCACGCGCACCGCGCCATGAGAGTGGATCCCTCTGGCATCGGCGTAAACCAATACTTCAGCCACGGTTGCAGCGTGCTCACGTTTTAACCCAGCCTGGCAGAGTTTa < 2:1272317/143‑1 (MQ=255) tccactctcatggcgcggtgcgcgtggaatactacgcggaacgcGCCATGAGAGTGGATCCCTCTGGCATCGGCGTAAACCAATACTTCAGCCACGGTTGCAGCGTGCTCACGTTTTAACCCAGCCTGGCaga > 1:622852‑M2/45‑133 (MQ=255) tccactctcatggcgcggtgcgcgtggaatactacgcggaacgcGCCATGAGAGTGGATCCCTCTGGCATCGGCGTAAACCAATACTTCAGCCACGGTTGCAGCGTGCTCACGTTTTAACCCAGCCTGGCaga < 2:622852‑M2/89‑1 (MQ=255) ccgccTTTTGAAATGCGTTCCGCGTAGTATTCCACGCGCACCGCGCCATGAGAGTGGATCCCACTGGCATCGGCGTAAACCAATACTTCAGCCAAGGTTGCAGCGTGCTCACGTTTTAACCAAGCCTGGCAGAGTGTATtcac > 2:401944/1‑141 (MQ=255) ttttGAAATGCGTTCCGCGTAGTATTCCACGCGCACCGCGCCATGAGAGTGGATCCCTCTGGCATCGGCGTAAACCAATACTTCAGCCACGGTTGCAGCGTGCTAACGTATTAAGCCGGCCTGGCAGAGTTTATTCTCAATTa > 1:531174/1‑143 (MQ=255) aTGCGTTCCGCGTAGTATTCCACGCGCACCGCGCCATGAGAGTGGATCCCTCTGGCATCGGCGTAAACCAATACTTCAGCCACGGTTGCAGCGTGCTCACGTTTTAACCCAGCCTGGCAGAGTTTATTCTCAATTAGCtggtg < 1:1121849/143‑1 (MQ=255) aTGCGTTCCGCGTAGTATGCCCCGCGCACCGCGCCATGAGAGTGGATCCCTCTGGCATCGGCGTAAACCAATACTTCAGCCACGGTTGCAGCGTGCTCACGTTTTAACCCAGCCTGGCAGAGTTTATTCTCAATTAGCtggtg < 1:1184182/143‑1 (MQ=255) GCGTTCCGCGTAGTATTCCACGCGCACCGCGCCATGAGAGTGGATCCCTCTGGCATCGGCGTAAACCAATACTTCAGCCACGGTTGCAGCGTGCTCACGTTTTAACCCAGCCTGGCAGAGTTTATTCTCAATTAGCTGGTGGa > 1:176046‑M1/1‑143 (MQ=255) cggacggcgTAGTAGTCCAAGCGCACCGCGCCATGAGAGTGGAGCCCTCTGGCATCGGCGTAAACCAATACTTCAGCCACGGTTGCAGCGTGCTCACGTTTTAACCCAGCCTGGCAGAGTTTATTCTCAATTAGCTGGTGGAg < 1:460815/137‑1 (MQ=255) GTTCCGCGTAGTATGCCACGCGCACCGCGCCATGAGAGTGGATCCCTCTGGCATCGGCGTAAACCAATACTTCAGCCACGGTTGCAGCGTGCTCACGTTTTAACCCAGCCTGGCAGAGTTTATTCTCAATTAGCTGGTGGAGt > 2:488686‑M1/1‑143 (MQ=255) tgcgcgtggaatactacgcgcaccgcGCCATGAGAGTGGATCCCTCTGGCATCGGCGTAAACCAATACTTCAGCCACGGTTGCAGCGTGCTCACGTTTTAACCCCGCCTGCCAGAGTTTATTCTCAATTAGCTGGTGGAgcgt > 2:282013‑M2/27‑143 (MQ=255) gtagtaTTCCACGCGCACCGCGCCATGAGAGTGGATCCCTCTGGCATCGGCGTAAACCAATACTTCAGCCACGGTTGCAGGGTGCTGACGTTCCGACTTTACCCGGCAGAGTTTATTCTCAATTAGCTGGTGGAGTGTTTccc > 1:537572/1‑143 (MQ=255) ttCCACGCGCACCGCGCCATGAGAGTGGATCCCTCTGGCATCGGCGTAAACCAATACTTCAGCCACGGTCGCAGCGTGCGCACGTTTTAACCCAGCCTGGCAGGGCTTATTCTCAATTAGCTGGTGGAGTGTTTCCCGCCTGa > 1:593609/1‑143 (MQ=255) gccACGCGCACCGCGCCATGAGAGTGGCGCCCTCTGGCATCGGCGTAAACCAATACTTCAGCCACCGTTGCAGCGTGCTCACGTTTTAACCCAGCCTGGCAGAGTTTATTCTCAATTAGCTGGTGGAGTGTTTCCCGACTGAt < 2:623483/142‑1 (MQ=255) cACGCGCACCGCGCCATTAGAGTGGATCCCTCTGGCATCGGCGTAAACCAATACTTCAGCCACGGTTGCAGCGTGCTCACGTTTTAACCCAGCCTGGCAGAGTTTATTCTCAATTAGCTGGTGGAGTGTTTCCCGACTGAttt < 2:647556/143‑1 (MQ=255) aCGCGCACCGCGCCATGAGAGTGGATCCCTCTGGCATCGGCGTAAACCAATACTTCAGCCACGGTTGCAGCGTGCTCACGTTTTAACCCAGCCTGGCAGAGTTTATTCTCAATTAGCTGGTGGAGTGTTTCCCGACTGAtttt < 2:1224986/143‑1 (MQ=255) cgcGCCATGAGAGTGGATCCCTCTGGCATCGGCGTAAACCAATACTTCAGCCACGGTTGCAGCGTGCTCACGTTTTAACCCAGCCTGGCAGAGTTTATTCTCAATTAGCTGGTGGAGTGTTTCCCGACTGATTTTCATCTGTc > 1:905325‑M2/4‑143 (MQ=255) | ATTTTCGCCGCGACCTGTCCGGCGGCATTGTCGGCATGTAAAATTGCCGAGCACGGCCCGGTTTCCTCAAGACGAAACTCCGGTTCGCGGTTGGTGCCGCCTTTTGAAATGCGTTCCGCGTAGTATTCCACGCGCACCGCGCCATGAGAGTGGATCCCTCTGGCATCGGCGTAAACCAATACTTCAGCCACGGTTGCAGCGTGCTCACGTTTTAACCCAGCCTGGCAGAGTTTATTCTCAATTAGCTGGTGGAGTGTTTCCCGACTGATTTTCATCTGTC > NC_000913/546089‑546368 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |