mutation predictions | marginal predictions | summary statistics | genome diff | command line log
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breseq version 0.35.4 revision f352f80f4bc9
mutation predictions | marginal predictions | summary statistics | genome diff | command line log |
| Marginal new junction evidence (lowest skew 10 of 21 shown) | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 4321860 = | 114 (1.720) | 4 (0.060) | 4/252 | NT | 3.6% | coding (563/726 nt) | phnF | putative transcriptional regulator PhnF |
| ? | NC_000913 | 4321892 = | 107 (1.690) | coding (531/726 nt) | phnF | putative transcriptional regulator PhnF | |||||
| * | ? | NC_000913 | = 4057706 | 113 (1.700) | 4 (0.060) | 4/252 | NT | 3.5% | coding (329/1410 nt) | glnA | glutamine synthetase |
| ? | NC_000913 | = 4057715 | 115 (1.810) | coding (320/1410 nt) | glnA | glutamine synthetase | |||||
| * | ? | NC_000913 | = 4053434 | 132 (1.990) | 3 (0.050) | 3/246 | NT | 2.3% | intergenic (+16/+213) | hemN/yshB | coproporphyrinogen III dehydrogenase/uncharacterized protein YshB |
| ? | NC_000913 | = 4053455 | 128 (2.070) | intergenic (+37/+192) | hemN/yshB | coproporphyrinogen III dehydrogenase/uncharacterized protein YshB | |||||
| * | ? | NC_000913 | 4012905 = | 125 (1.880) | 3 (0.050) | 3/250 | NT | 2.3% | intergenic (‑89/‑148) | metR/metE | DNA‑binding transcriptional dual regulator MetR/cobalamin‑independent homocysteine transmethylase |
| ? | NC_000913 | 4013030 = | 132 (2.100) | intergenic (‑214/‑23) | metR/metE | DNA‑binding transcriptional dual regulator MetR/cobalamin‑independent homocysteine transmethylase | |||||
| * | ? | NC_000913 | = 3998036 | 115 (1.730) | 3 (0.050) | 3/260 | NT | 2.5% | coding (54/2163 nt) | uvrD | ssDNA translocase and dsDNA helicase ‑ DNA helicase II |
| ? | NC_000913 | = 3998077 | 119 (1.820) | coding (95/2163 nt) | uvrD | ssDNA translocase and dsDNA helicase ‑ DNA helicase II | |||||
| * | ? | NC_000913 | = 3950442 | 122 (1.840) | 6 (0.090) | 5/260 | NT | 4.7% | intergenic (+22/‑65) | ilvL/ilvX | ilvXGMEDA operon leader peptide/uncharacterized protein IlvX |
| ? | NC_000913 | = 3950470 | 122 (1.870) | intergenic (+50/‑37) | ilvL/ilvX | ilvXGMEDA operon leader peptide/uncharacterized protein IlvX | |||||
| * | ? | NC_000913 | 3948426 = | 152 (2.290) | 4 (0.060) | 3/246 | NT | 2.9% | intergenic (+2/+23) | maoP/yifB | macrodomain Ori protein/putative magnesium chelatase YifB |
| ? | NC_000913 | 3948449 = | 131 (2.120) | coding (1521/1521 nt) | yifB | putative magnesium chelatase YifB | |||||
| * | ? | NC_000913 | = 3946670 | 127 (1.910) | 4 (0.060) | 3/252 | NT | 3.2% | intergenic (+63/‑30) | rrlC/rrfC | 23S ribosomal RNA/5S ribosomal RNA |
| ? | NC_000913 | = 4171619 | NA (NA) | intergenic (+75/‑18) | rrlB/rrfB | 23S ribosomal RNA/5S ribosomal RNA | |||||
| * | ? | NC_000913 | 3915505 = | 130 (1.960) | 4 (0.060) | 4/246 | NT | 3.3% | intergenic (‑305/+48) | glmU/atpC | fused N‑acetylglucosamine‑1‑phosphate uridyltransferase and glucosamine‑1‑phosphate acetyltransferase/ATP synthase F1 complex subunit epsilon |
| ? | NC_000913 | 3915535 = | 114 (1.840) | intergenic (‑335/+18) | glmU/atpC | fused N‑acetylglucosamine‑1‑phosphate uridyltransferase and glucosamine‑1‑phosphate acetyltransferase/ATP synthase F1 complex subunit epsilon | |||||
| * | ? | NC_000913 | 3842398 = | 131 (1.970) | 3 (0.050) | 3/240 | NT | 2.6% | coding (5/453 nt) | yicN | conserved protein YicN |
| ? | NC_000913 | 3842433 = | 109 (1.810) | intergenic (‑31/+22) | yicN/adeQ | conserved protein YicN/adenine transporter | |||||