New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_000913 | = 1231303 | 43 (0.950) | 3 (0.070) | 3/250 | NT | 7.1% | coding (118/1269 nt) | umuC | DNA polymerase V catalytic protein |
? | NC_000913 | = 1231337 | 38 (0.880) | coding (152/1269 nt) | umuC | DNA polymerase V catalytic protein |
TGGTGATCCACGTCGTTAAGGCGATGCGCTGATGTTTGCCCTCTGTGATGTAAACGCGTTTTATGCCAGCTGTGAGACGGTGTTTCGCCCTGATTTATGGGGTAAACCGGTGGTTGTGCTATCGAATAATGACGGTTGCGTTATCGCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/1231155‑1231303 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atcgcccATTTTAACGCCAAGCGCCTTTGCCTCAGCGTTTCGGGCGATAACGCAACCGTCATTATTCGATAGCACAACCACCGGTTTACCCCATAAATCAGGGCGAAACACCGTCTCACAGCTGGCATAAAACGCGTTTACATCACAGA < NC_000913/1231337‑1231196 TGGTGATCCACGTCGTTAAGGCGATGCGCTGATGTTTGCGGTCTGTGATGTAAACGCGTTTTATGCCAGCTGTGAGACGGTGTTTCGCCCTGATTTATGGGGTAAACCGGTGGTTGTGCTATCGAATAATGACGGTTGCGTTA < 2:422305/143‑1 TGGTGATCCACGTCGTTAAGGCGATGCGCTGATGTTTGACCTCTGTTATGGAAACGCGTTTTATGCCAGCTGTGAGACGGTGTTTCGCCCTGATTTATGGGGTAAACCGGTGGTTGTGCTATCGAATAATGACGGTTGCGTTA > 1:844750/1‑143 gctagCCACGTCGTGAGGGCCACGCGCTGGTGTTTGCCCTCTGTGAGGTCAACGCGTTTTATGCCAGCTGTGAGACTGTGTTTCGCCCTGATTTATGGGGTAAACCGGTGGTTGTGCTATCGAATAATGACGGTTGCGTTATC < 1:878801/138‑1 GTGATCCACGTCGTCAAGGCGATGCGCTGATGTCTGCCCTCCGTGATGTAAACGCGTTTTATGCCAGCGGTGTGACGGTGTTACGCTCTGATTTATGTGGTAAACCGGTGGTTGTGCTATCGAATAATGACGGTTGCGTTATC < 1:287726/143‑1 CCCTTTGTGATGTAAGCGCGTTTTATGCTAGCTGTGAGACGGTGTTTCGCCCTGATTTATGGGGTAAACCGGTGGTTGTGCTATCGAATAATGACGGTTGCGTTATCGCCC‑‑‑GAAACGCCAAGCGCCTTTGCCTCAGCGTTTCG < 2:133106/143‑1 tagACGCGTTTTATGCCAGCTGTGAGACGGTTCTTCGCCCTGATTTATGGTGTAAACCGGTGGTTGTGCTATCCAATAATTACGGTTGCGTTATCGCCCATTTTAACGCCAAGCGCCTTTGCCTCAGCGTTTCGGGCGATAAC < 1:274587/140‑1 CGCGTTTTATGCCAGCTGTGAGACGGTGTTTCGCCCTGATTTATGGGGTAAACCGGTGGTTGTGCTATCGAATAATGACGGTTGCGTTATCGCCCATTTTAACGCCAAGCGCCTTTGCCTCAGCGTTTCGGGCGATAACGCAA < 2:248632/143‑1 ATCGCCCATTTTACCGCCAAGCGCCTTTGCCTCAGCGTCTCGGGCGATAACGCAACCGTCATTATTCGACAGCACAACCACCGGTTTACCCCATAAATCAGGGTGAAACACCGTCTCACAGCTGGCATAAAACGCGTTTACAT < 1:315989/143‑1 GCCCATTTTAACGCCAAGCGCCTTTGCCTCAGCGTTTCGAGCGATAACGCAACCGTCATTATTCGATCGCCCAACCACCGGTTTACCCCATAAATCAGGGCGAAACACCGTCTCACCGATGGCATAAAACGCGTGTACATCAC > 2:281187/1‑143 CATTTTAACGCCAAGCGCCTTTGCCTCAGCGTTTCGGGCGATAACGCAACCGTCATTATTCGATAGCACAACCACCGGGTTACCCCATAAATCAGGGCGAAACACCGTCTCACAGCTGGCATAAAACGCGTTTACATCACAGA > 1:802194/1‑143 TGGTGATCCACGTCGTTAAGGCGATGCGCTGATGTTTGCCCTCTGTGATGTAAACGCGTTTTATGCCAGCTGTGAGACGGTGTTTCGCCCTGATTTATGGGGTAAACCGGTGGTTGTGCTATCGAATAATGACGGTTGCGTTATCGCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/1231155‑1231303 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atcgcccATTTTAACGCCAAGCGCCTTTGCCTCAGCGTTTCGGGCGATAACGCAACCGTCATTATTCGATAGCACAACCACCGGTTTACCCCATAAATCAGGGCGAAACACCGTCTCACAGCTGGCATAAAACGCGTTTACATCACAGA < NC_000913/1231337‑1231196 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |