New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	3424418 =	NA (NA)	5 (0.220)	5/256	NT	100%	noncoding (2366/2904 nt)	rrlD	23S ribosomal RNA
	?	NC_000913	= 3946053	0 (0.000)					noncoding (2350/2904 nt)	rrlC	23S ribosomal RNA

ACAGTGTCTGGTGGGTAGTTTGACTGGGGCGGTCTCCTCCTAAAGAGTAACGGAGGAGCACGAAGGTTGGCTAATCCTGGTCGGACATCAGGAGGTTAGTGCAATGGCATAAGCCAGCTTGACTGCGAGCGTGACGGCGCGAgcag‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/3424559‑3424418 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GCAGTCAAGCTGGCTTATGCCATTGCACTAACCTCCTGATGTCCGACCAGGATTAGCCAACCTTCGTGCTCCTCCGTTACTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATCACGG  <  NC_000913/3946053‑3945910                                                                                                                                                                                                                                                                                                ACAGTGTCTGGTGGGTAGTTTGACTGGGGCGGTCTCCTCCTAAAGAGTAACGGAGGAGCACGAAGGTTGGCTAATCCTGGTCGGACATCAGGAGGTTAGTGCAATGGCATAAGCCAGCTTGACTGCGAGCGTGACGGCGCGAG                                                                                                                                                 >  2:417747/1‑143    tTGTCTGGTGGGTAGTTTGACTGGGGCGGTCTCCTGCTAAAGAGTAACGGAGGAGCACGAAGGTTGGCTAATCCTGGTCGGACATCAGGAGGTTAGTGCAATGGCATAAGCCAGCTTGACTGCGAGCGTGACGGCGCGAGCAG                                                                                                                                              <  1:164252/142‑1    GTGTCTGGTGGGTAGTTTGACTGGGGCGGTCTCCTCCTAAAGAGTAACGGAGGAGCACGAAGGTTGGCTAATCCTGGTCGGACATCAGGAGGTTAGTGCAATGGCATAAGCCAGCTTGACTGCGAGCGTGACAGCGCGAGCAt                                                                                                                                              >  1:427317/1‑142    GTGTCTGGTGGGTAGTTTGACTGGGGCGGTCCCCTCCTAAAGAGTAACGGAGGAGCACGAAGCTTGGGTAATCCTGGTCGGACAGCAGGAGTTTTGTGCAATGGCATAAGCCAGCTTGACTGCGAGCGTGACGGCGCGAGCAG                                                                                                                                              <  1:470175/143‑1    GTGTCTGGTGGGGAGTGTGACCGGGGCGGTCTCCTCGTAAAGGGTAACGGAGGAGCACGAGGGTTGGCTAAGCCTGGTCGGACATCAGGAGGTTAGTGCAATGGCATAAGCCAGCTTGACTGCGAGCGTGACGGCGCGAGCAG                                                                                                                                              <  1:30355/143‑1        CTGGTGGGTAGTTTGACTGGGGCGGTCTCCTCCTAAAGAGTAACGGAGGAGCACGAAGGTTGGCTCATCCTGGTCGGACATCAGGAGGTTAGTGCAATGCCATACGCCAGCATGACAGCGAGCGGGACGGCGCGAGCAGcaac                                                                                                                                          >  2:423471/1‑139                                                                                                         TGGCATAAGCCAGCTTGACTGCGAGCGTGACGGCGCGAGCAGTCAAGCTGGCTTATGCCA                                                                                                                            >  1:169411/1‑60                                                                                                         TGGCATAAGCCAGCTTGACTGCGAGCGTGACGGCGCGAGCAGTCAAGCTGGCTTATGCCA                                                                                                                            <  2:169411/60‑1                                                                                                                   CAGCTTGACTGCGAGCGTGACGGCGCGAGCAGTCAAACTGGCTTATGCCATTGCACTAACCTCCTGATGCCCGAACAGGATTAGCCAACCTTCGTGCTCATCCGTGACCCCTTAGGAGGAGACCGCCCCAGGCAAACAACCCc                               >  2:395232/1‑142                                                                                                                       TTGACTGCGAGCGTGACGGCGCGAGCAGTCAAGCTGGCTTATGCCATTGCACTAACCTCCTGATGTCCGACCAGGATTAGCCAACCTTCGTGCTCCTCCGTTACTCTTTAGGAGGAGACCGCCCCCGTCAAACTACCCACCAG                           >  2:352452/1‑143                                                                                                                            TGCGAGCGTGACGGCGCGAGCAGTCAAGCTGGCTTATGCCATTGCACTAACCTCCTGATGTCCGACCAGGATTAGCCAACCTTCGTGCTCCTCCGTTACCCTTTAGGAGGAGACCGCCCCCGTCCACCCACCCCCAAGCCACa                      >  2:117107/1‑142                                                                                                                                               GCAGTCAAGCTGGCTTATGCCATTGCACTAACCTCCTGATGTCAGACCAGGATTAACCAACCTTCGTGCTCATCCGTTACTCTTTAGGAGGAGACCGCACAAGACAAACAACCAACCACACACAGTCCGCAAACCCGATCACG   >  2:181000/1‑143                                                                                                                                                CAGTCAAGCTGGCTTATGCCATTGCACTAACCTCCTGATGTCCGACCAGGATTAGCCACACTTCGTGCTCCTCCGTTACTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATCACGG  >  1:422730/1‑143                                                                                                                                                CAGTCAAGCTGGCTTATGCCATTGCACTAACCTCCTGATGTCCGACCAGGATTAGCCAACCTTCGTGCTCCTCCGTTACTCTTTAGGAGGACACCGCCCCAGTCGAACTACCCACCAGACACTGTCCGCAACCCGGATCACGG  <  1:89532/143‑1                                                                                                                                                                                                                                                                                                ACAGTGTCTGGTGGGTAGTTTGACTGGGGCGGTCTCCTCCTAAAGAGTAACGGAGGAGCACGAAGGTTGGCTAATCCTGGTCGGACATCAGGAGGTTAGTGCAATGGCATAAGCCAGCTTGACTGCGAGCGTGACGGCGCGAgcag‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/3424559‑3424418 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GCAGTCAAGCTGGCTTATGCCATTGCACTAACCTCCTGATGTCCGACCAGGATTAGCCAACCTTCGTGCTCCTCCGTTACTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATCACGG  <  NC_000913/3946053‑3945910

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.