| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC | CP009273 | 415,065 | (AAGAT)1→2 | coding (19/1320 nt) | brnQ → | branched‑chain amino acid transport system 2 carrier protein; LIV‑II transport system for Ile, Leu, and Val |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | = 415059 | 1 (0.010) | 189 (1.200) +TAAGA |
116/178 | 0.0 | 99.5% | coding (13/1320 nt) | brnQ | branched‑chain amino acid transport system 2 carrier protein; LIV‑II transport system for Ile, Leu, and Val |
| ? | CP009273 | 415060 = | 1 (0.010) | coding (14/1320 nt) | brnQ | branched‑chain amino acid transport system 2 carrier protein; LIV‑II transport system for Ile, Leu, and Val | |||||
Only 100 of 213 total aligned reads displayed.
AATTGTTTAAATATACCGCTGTATCATCCCCAGGGATTGGCACAAAAATTTAACGTTACAACACCACATCCACAGGCAGTATGATTTATGACCCATCAAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > CP009273/414960‑415059‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TAAGATCGCGCGATATCATCGCTCTGGGCTTTATGACATTTGCGTTGTTCGTCGGCGCAGGTAACATTATTTTCCCTCCAATGGTCGGCTTACAGGCAGG > CP009273/415060‑415159 ||||| AATTGTTTAAATATACCGCTGTATCATCCCCAGGGATTGGCACAAAAATTTAACGTTACAACACCACATCCACAGGCAGTATGATTTATGACCCATCAATT < 2:2607907/101‑1AATTGTTTAAATATACCGCTGTATCATCCCCAGGGATTGGCACAAAAATTTAACGTTACAACACCACATCCACAGGCAGTATGATTTATGACCCATCAATT < 1:3532812/101‑1 TGTTTAAATATACCGCTGTATCATCCCCAGGGATTGGCACAAAAATTTAACGTTACAACACCACATCCACAGGCAGTATGATTTATGACCCATCAATTAAG > 2:2541407/1‑101 GTTTAAATATACCGCTGTATCATCCCCAGGGATTGGCACAAAAATTTAACGTTACAACACCACATCCACAGGCAGTATGATTTATGACCCATCAATTAAGA > 1:2631431/1‑101 TTTAAATATACCGCTGTATCATCCCCAGGGATTGGCACAAAAATTTAACGTTACAACACCACATCCACAGGCAGTATGATTTATGACCCATCAATTAAGAT > 1:1863398/1‑101 TTTAAATATACCGCTGTATCATCCCCAGGGATTGGCACAAAAATTTAACGTTACAACACCACATCCACAGGCAGTATGATTTATGACCCATCAATTAAGAT > 2:1493310/1‑101 TTTAAATATACCGCTGTATCATCCCCAGGGATTGGCACAAAAATTTAACGTTACAACACCACATCCACAGGCAGTATGATTTATGACCCATCAATTAAGAT < 2:1346475/101‑1 TTTAAATATACCGCTGTATCATCCCCAGGGATTGGCACAAAAATTTAACGTTACAACACCACATCCACAGGCAGTATGATTTATGACCCATCAATTAAGAT > 2:3484937/1‑101 TTAAATATACCGCTGTATCATCCCCAGGGATTGGCACAAAAATTTAACGTTACAACACCACATCCACAGGCAGTATGATTTATGACCCATCAATTAAGATA < 2:1128300/101‑1 TTAAATATACCGCTGTATCATCCCCAGGGATTGGCACAAAAATTTAACGTTACAACACCACATCCACAGGCAGTATGATTTATGACCCATCAATTAAGATA > 1:2772300/1‑101 TTAAATATACCGCTGTATCATCCCCAGGGATTGGCACAAAAATTTAACGTTACAACACCACATCCACAGGCAGTATGATTTATGACCCATCAATTAAGATA < 1:3880276/101‑1 TAAATATACCGCTGTATCATCCCCAGGGATTGGCACAAAAATTTAACGTTACAACACCACATCCACAGGCAGTATGATTTATGACCCATCAATTAAGATAA > 2:3227104/1‑101 TAAATATACCGCTGTATCATCCCCAGGGATTGGCACAAAAATTTAACGTTACAACACCACATCCACAGGCAGTATGATTTATGACCCATCAATTAAGATAA < 1:3591294/101‑1 AAATATACCGCTGTATCATCCCCAGGGATTGGCACAAAAATTTAACGTTACAACACCACATCCACAGGCAGTATGATTTATGACCCATCAATTAAGATAAG < 2:2985245/101‑1 AAATATACCGCTGTATCATCCCCAGGGATTGGCACAAAAATTTAACGTTACAACACCACATCCACAGGCAGTATGATTTATGACCCATCAATTAAGATAAG < 1:634226/101‑1 ATATACCGCTGTATCATCCCCAGGGATTGGCACAAAAATTTAACGTTACAACACCACATCCACAGGCAGTATGATTTATGACCCATCAATTAAGATAAGAT < 2:1374365/101‑1 ATATACCGCTGTATCATCCCCAGGGATTGGCACAAAAATTTAACGTTACAACACCACATCCACAGGCAGTATGATTTATGACCCATCAATTAAGATAAGAT < 2:2876944/101‑1 TATACCGCTGTATCATCCCCAGGGATTGGCACAAAAATTTAACGTTACAACACCACATCCACAGGCAGTATGATTTATGACCCATCAATTAAGATAAGATC < 1:2130865/101‑1 TATACCGCTGTATCATCCCCAGGGATTGGCACAAAAATTTAACGTTACAACACCACATCCACAGGCAGTATGATTTATGACCCATCAATTAAGATAAGATC > 2:156979/1‑101 ATACCGCTGTATCATCCCCAGGGATTGGCACAAAAATTTAACGTTACAACACCACATCCACAGGCAGTATGATTTATGACCCATCAATTAAGATAAGATCG < 2:3679051/101‑1 ATACCGCTGTATCATCCCCAGGGATTGGCACAAAAATTTAACGTTACAACACCACATCCACAGGCAGTATGATTTATGACCCATCAATTAAGATAAGATCG > 2:469211/1‑101 TACCGCTGTATCATCCCCAGGGATTGGCACAAAAATTTAACGTTACAACACCACATCCACAGGCAGTATGATTTATGACCCATCAATTAAGATAAGATCGC > 2:2522910/1‑101 ACCGCTGTATCATCCCCAGGGATTGGCACAAAAATTTAACGTTACAACACCACATCCACAGGCAGTATGATTTATGACCCATCAATTAAGATAAGATCGCG < 2:783729/101‑1 ACCGCTGTATCATCCCCAGGGATTGGCACAAAAATTTAACGTTACAACACCACATCCACAGGCAGTATGATTTATGACCCATCAATTAAGATAAGATCGCG < 2:2807275/101‑1 CGCTGTATCATCCCCAGGGATTGGCACAAAAATTTAACGTTACAACACCACATCCACAGGCAGTATGATTTATGACCCATCAATTAAGATAAGATCGCGCG < 2:223958/101‑1 CGCTGTATCATCCCCAGGGATTGGCACAAAAATTTAACGTTACAACACCACATCCACAGGCAGTATGATTTATGACCCATCAATTAAGATAAGATCGCGCG > 2:61575/1‑101 CGCTGTATCATCCCCAGGGATTGGCACAAAAATTTAACGTTACAACACCACATCCACAGGCAGTATGATTTATGACCCATCAATTAAGATAAGATCGCGCG < 2:294157/101‑1 GCTGTATCATCCCCAGGGATTGGCACAAAAATTTAACGTTACAACACCACATCCACAGGCAGTATGATTTATGACCCATCAATTAAGATAAGATCGCGCGA > 2:1695049/1‑101 CTGTATCATCCCCAGGGATTGGCACAAAAATTTAACGTTACAACACCACATCCACAGGCAGTATGATTTATGACCCATCAATTAAGATAAGATCGCGCGAT > 1:1986800/1‑101 GTATCATCCCCAGGGATTGGCACAAAAATTTAACGTTACAACACCACATCCACAGGCAGTATGATTTATGACCCATCAATTAAGATAAGATCGCGCGATAT > 1:1894058/1‑101 ATCATCCCCAGGGATTGGCACAAAAATTTAACGTTACAACACCACATCCACAGGCAGTATGATTTATGACCCATCAATTAAGATAAGATCGCGCGATATCA < 1:751644/101‑1 TCATCCCCAGGGATTGGCACAAAAATTTAACGTTACAACACCACAGCCACAGGCAGTATGATTTATGACCCATCAATTAAGATAAGATCGCGCGATATCAT < 1:691516/101‑1 TCCCCAGGGATTGGCACAAAAATTTAACGTTACAACACCACATCCACAGGCAGTATGATTTATGACCCATCAATTAAGATAAGATCGCGCGATATCATCGC < 2:3961456/101‑1 CCCCAGGGATTGGCACAAAAATTTAACGTTACAACACCACATCCACAGGCAGTATGATTTATGACCCATCAATTAAGATAAGATCGCGCGATATCATCGCT > 1:1775530/1‑101 CCCAGGGATTGGCACAAAAATTTAACGTTACAACACCACATCCACAGGCAGTATGATTTATGACCCATCAATTAAGATAAGATCGCGCGATATCATCGCTC > 1:2855180/1‑101 CCAGGGATTGGCACAAAAATTTAACGTTACAACACCACATCCACAGGCAGTATGATTTATGACCCATCAATTAAGATAAGATCGCGCGATATCATCGCTCT < 1:3401697/101‑1 CCAGGGATTGGCACAAAAATTTAACGTTACAACACCACATCCACAGGCAGTATGATTTATGACCCATCAATTAAGATAAGATCGCGCGATATCATCGCTCT > 2:2423110/1‑101 CAGGGATTGGCACAAAAATTTAACGTTACAACACCACATCCACAGGCAGTATGATTTATGACCCATCAATTAAGATAAGATCGCGCGATATCATCGCTCTG > 2:824594/1‑101 CAGGGATTGGCACAAAAATTTAACGTTACAACACCACATCCACAGGCAGTATGATTTATGACCCATCAATTAAGATAAGATCGCGCGATATCATCGCTCTG > 2:2297821/1‑101 CAGGGATTGGCACAAAAATTTAACGTTACAACACCACATCCACAGGCAGTATGATTTATGACCCATCAATTAAGATAAGATCGCGCGATATCATCGCTCTG < 1:3031173/101‑1 GGCACAAAAATTTAACGTTACAACACCACATCCACAGGCAGTATGATTTATGACCCATCAATTAAGATAAGATCGCGCGATATCATCGCTCTGGGCTTTAT < 2:1181063/101‑1 CACAAAAATTTAACGTTACAACACCACATCCACAGGCAGTATGATTTATGACCCATCAATTAAGATAAGATCGCGCGATATCATCGCTCTGGGCTTTATGA < 2:1387866/101‑1 AAATTTAACGTTACAACACCACATCCACAGGCAGTATGATTTATGACCCATCAATTAAGATAAGATCGCGCGATATCATCGCTCTGGGCTTTATGACATTT < 2:21144/101‑1 AATTTAACGTTACAACACCACATCCACAGGCAGTATGATTTATGACCCATCAATTAAGATAAGATCGCGCGATATCATCGCTCTGGGCTTTATGACATTTG < 2:2440477/101‑1 ATTTAACGTTACAACACCACATCCACAGGCAGTATGATTTATGACCCATCAATTAAGATAAGATCGCGCGATATCATCGCTCTGGGCTTTATGACATTTGC < 2:633792/101‑1 ATTTAACGTTACAACACCACATCCACAGGCAGTATGATTTATGACCCATCAATTAAGATAAGATCGCGCGATATCATCGCTCTGGGCTTTATGACATTTGC < 1:1600911/101‑1 TTTAACGTTACAACACCACATCCACAGGCAGTATGATTTATGACCCATCAATTAAGATAAGATCGCGCGATATCATCGCTCTGGGCTTTATGACATTTGCG > 2:1324252/1‑101 TAACGTTACAACACCACATCCACAGGCAGTATGATTTATGACCCATCAATTAAGATAAGATCGCGCGATATCATCGCTCTGGGCTTTATGACATTTGCGTT < 1:1480015/101‑1 TAACGTTACAACACCACATCCACAGGCAGTATGATTTATGACCCATCAATTAAGATAAGATCGCGCGATATCATCGCTCTGGGCTTTATGACATTTGCGTT < 1:2303231/101‑1 ACGTTACAACACCACATCCACAGGCAGTATGATTTATGACCCATCAATTAAGATAAGATCGCGCGATATCATCGCTCTGGGCTTTATGACATTTGCGTTGT > 1:3671596/1‑101 ACGTTACAACACCACATCCACAGGCAGTATGATTTATGACCCATCAATTAAGATAAGATCGCGCGATATCATCGCTCTGGGCTTTATGACATTTGCGTTGT > 1:1679397/1‑101 TACAACACCACATCCACAGGCAGTATGATTTATGACCCATCAATTAAGATAAGATCGCGCGATATCATCGCTCTGGGCTTTATGACATTTGCGTTGTTCGT < 2:3053354/101‑1 TACAACACCACATCCACAGGCAGTATGATTTATGACCCATCAATTAAGATAAGATCGCGCGATATCATCGCTCTGGGCTTTATGACATTTGCGTTGTTCGT > 1:1578272/1‑101 AACACCACATCCACAGGCAGTATGATTTATGACCCATCAATTAAGATAAGATCGCGCGATATCATCGCTCTTGGCTTTATGACATTTGCGTTGTTCGTCGG > 1:2416335/1‑101 AACACCACATCCACAGGCAGTATGATTTATGACCCATCAATTAAGATAAGATCGCGCGATATCATCGCTCTGGGCTTTATGACATTTGCGTTGTTCGTCGG < 1:2884798/101‑1 AACACCACATCCACAGGCAGTATGATTTATGACCCATCAATTAAGATAAGATCGCGCGATATCATCGCTCTGGGCTTTATGACATTTGCGTTGTTCGTCGG < 1:3430610/101‑1 CACCACATCCACAGGCAGTATGATTTATGACCCATCAATTAAGATAAGATCGCGCGATATCATCGCTCTGGGCTTTATGTCATTTGCGTTGTTCGTCGGCG < 1:1713044/101‑1 CACCACATCCACAGGCAGTATGATTTATGACCCATCAATTAAGATAAGATCGCGCGATATCATCGCTCTGGGCTTTATGACATTTGCGTTGTTCGTCGGCG < 2:1308138/101‑1 CACCACATCCACAGGCAGTATGATTTATGACCCATCAATTAAGATAAGATCGCGCGATATCATCGCTCTGGGCTTTATGACATTTGCGTTGTTCGTCGGCG > 2:1234628/1‑101 ACCACATCCACAGGCAGTATGATTTATGACCCATCAATTAAGATAAGATCGCGCGATATCATCGCTCTGGGCTTTATGACATTTGCGTTGTTCGTCGGCGC > 2:3789782/1‑101 ACCACATCCACAGGCAGTATGATTTATGACCCATCAATTAAGATAAGATCGCGCGATATCATCGCTCTGGGCTTTATGACATTTGCGTTGTTCGTCGGCGC > 2:1060281/1‑101 CCACATCCACAGGCAGTATGATTTATGACCCATCAATTAAGATAAGATCGCGCGATATCATCGCTCTGGGCTTTATGACATTTGCGTTGTTCGTCGGCGCA < 1:856670/101‑1 CACATCCACAGGCAGTATGATTTATGACCCATCAATTAAGATAAGATCGCGCGATATCATCGCTCTGGGCTTTATGACATTTGCGTTGTTCGTCGGCGCAG > 1:3541839/1‑101 ACATCCACAGGCAGTATGATTTATGACCCATCAATTAAGATAAGATCGCGCGATATCATCGCTCTGGGCTTTATGACATTTGCGTTGTTCGTCGGCGCAGG < 2:3707589/101‑1 ACATCCACAGGCAGTATGATTTATGACCCATCAATTAAGATAAGATCGCGCGATATCATCGCTCTGGGCTTTATGACATTTGCGTTGTTCGTCGGCGCAGG < 2:3312581/101‑1 ATCCACAGGCAGTATGATTTATGACCCATCAATTAAGATAAGATCGCGCGATATCATCGCTCTGGGCTTTATGACATTTGCGTTGTTCGTCGGCGCAGGTA > 2:1294963/1‑101 CCACAGGCAGTATGATTTATGACCCATCAATTAAGATAAGATCGCGCGATATCATCGCTCTGGGCTTTATGACATTTGCGTTGTTCGTCGGCGCAGGTAAC > 1:1016640/1‑101 ACAGGCAGTATGATTTATGACCCATCAATTAAGATAAGATCGCGCGATATCATCGCTCTGGGCTTTATGACATTTGCGTTGTTCGTCGGCGCAGGTAACAT > 2:3899987/1‑101 CAGGCAGTATGATTTATGACCCATCAATTAAGATAAGATCGCGCGATATCATCGCTCTGGGCTTTATGACATTTGCGTTGTTCGTCGGCGCAGGTAACATT > 1:886712/1‑101 CAGGCAGTATGATTTATGACCCATCAATTAAGATAAGATCGCGCGATATCATCGCTCTGGGCTTTATGACATTTGCGTTGTTCGTCGGCGCAGGTAACATT < 1:727563/101‑1 AGGCAGTATGATTTATGACCCATCAATTAAGATAAGATCGCGCGATATCATCGCTCTGGGCTTTATGACATTTGCGTTGTTCGTCGGCGCAGGTAACATTA > 1:496838/1‑101 AGTATGATTTATGACCCATCAATTAAGATAAGATCGCGCGATATCATCGCTCTGGGCTTTATGACATTTGCGTTGTTCGTCGGCGCAGGTAACATTATTTT < 2:2464939/101‑1 AGTATGATTTATGACCCATCAATTAAGATAAGATCGCGCGATATCATCGCTCTGGGCTTTATGACATTTGCGTTGTTCGTCGGCGCAGGTAACATTATTTT > 1:112423/1‑101 AGTATGATTTATGACCCATCAATTAAGATAAGATCGCGCGATATCATCGCTCTGGGCTTTATGACATTTGCGTTGTTCGTCGGCGCAGGTAACATTATTTT < 1:61575/101‑1 AGTATGATTTATGACCCATCAATTAAGATAAGATCGCGCGATATCATCGCTCTGGGCTTTATGACATTTGCGTTGTTCGTCGGCGCAGGTAACATTATTTT < 1:3078622/101‑1 AGTATGATTTATGACCCATCAATTAAGATAAGATCGCGCGATATCATCGCTCTGGGCTTTATGACATTTGCGTTGTTCGTCGGCGCAGGTAACATTATTTT < 1:2893204/101‑1 GTATGATTTATGACCCATCAATTAAGATAAGATCGCGCGATATCATCGCTCTGGGCTTTATGACATTTGCGTTGTTCGTCGGCGCAGGTAACATTATTTTC > 1:2258534/1‑101 TATGATTTATGACCCATCAATTAAGATAAGATCGCGCGATATCATCGCTCTGGGCTTTATGACATTTGCGTTGTTCGTCGGCGCAGGTAACATTATTTTCC > 1:1462155/1‑101 GATTTATGACCCATCAATTAAGATAAGATCGCGCGATATCATCGCTCTGGGCTTTATGACATTTGCGTTGTTCGTCGGCGCAGGTAACATTATTTTCCCTC > 1:3189017/1‑101 GATTTATGACCCATCAATTAAGATAAGATCGCGCGATATCATCGCTCTGGGCTTTATGACATTTGCGTTGTTCGTCGGCGCAGGTAACATTATTTTCCCTC < 2:1999146/101‑1 TTTATGACCCATCAATTAAGATAAGATCGCGCGATATCATCGCTCTGGGCTTTATGACATTTGCGTTGTTCGTCGGCGCAGGTAACATTATTTTCCCTCCA < 1:1769638/101‑1 TTATGACCCATCAATTAAGATAAGATCGCGCGATATCATCGCTCTGGGCTTTATGACATTTGCGTTGTTCGTCGGCGCAGGTAACATTATTTTCCCTCCAA > 1:139433/1‑101 TATGACCCATCAATTAAGATAAGATCGCGCGATATCATCGCTCTGGGCTTTATGACATTTGCGTTGTTCGTCGGCGCAGGTAACATTATTTTCCCTCCAAT > 2:2098959/1‑101 ATGACCCATCAATTAAGATAAGATCGCGCGATATCATCGCTCTGGGCTTTATGACATTTGCGTTGTTCGTCGGCGCAGGTAACATTATTTTCCCTCCAATG < 1:3914991/101‑1 ATGACCCATCAATTAAGATAAGATCGCGCGATATCATCGCTCTGGGCTTTATGACATTTGCGTTGTTCGTCGGCGCAGGTAACATTATTTTCCCTCCAATG < 1:2216622/101‑1 TGACCCATCAATTAAGATAAGATCGCGCGATATCATCGCTCTGGGCTTTATGACATTTGCGTTGTTCGTCGGCGCAGGTAACATTATTTTCCCTCCAATGG < 1:2490286/101‑1 GACCCATCAATTAAGATAAGATCGCGCGATATCATCGCTCTGGGCTTTATGACATTTGCGTTGTTCGTCGGCGCAGGTAACATTATTTTCCCTCCAATGGT < 2:2905377/101‑1 GACCCATCAATTAAGATAAGATCGCGCGATATCATCGCTCTGGGCTTTATGACATTTGCGTTGTTCGTCGGCGCAGGTAACATTATTTTCCCTCCAATGGT < 2:2669634/101‑1 ACCCATCAATTAAGATAAGATCGCGCGATATCATCGCTCTGGGCTTTATGACATTTGCGTTGTTCGTCGGCGCAGGTAACATTATTTTCCCTCCAATGGTC < 2:1829119/101‑1 ACCCATCAATTAAGATAAGATCGCGCGATATCATCGCTCTGGGCTTTATGACATTTGCGTTGTTCGTCGGCGCAGGTAACATTATTTTCCCTCCAATGGTC < 2:2714667/101‑1 gCAATTAAGATAAGATCGCGCGATATCATCGCTATGGGCTTTATGACATTTGCGTTGTTCGTCGGCGCAGGTAACATTATTTTCCCTCCAATGGTCGGCTT < 2:1147618/100‑1 TCAATTAAGATAAGATCGCGCGATATCATCGCTCTGGGCTTTATGACATTTGCGTTGTTCGTCGGCGCAGGTAACATTATTTTCCCTCCAATGGTCGGCTT < 2:1863398/101‑1 CAATTAAGATAAGATCGCGCGATATCATCGCTCTGGGCTTTATGACATTTGCGTTGTTCGTCGGCGCAGGTAACATTATTTTCCCTCCAATGGTCGGCTTA > 1:504214/1‑101 AATTAAGATAAGATCGCGCGATATCATCGCTCTGGGCTTTATGACATTTGCGTTGTTCGTCGGCGCAGGTAACATTATTTTCCCTCCAATGGTCGGCTTAC < 1:2446894/101‑1 TAAGATAAGATCGCGCGATATCATCGCTCTGGGCTTTATGACATTTGCGTTGTTCGTCGGCGCAGGTCACATTATTTTCCCTCCAATGGTCGGCTTACAGG < 1:2297821/101‑1 AAGATAAGATCGCGCGATATCATCGCTCTGGGCTTTATGACATTTGCGTTGTTCGTCGGCGCAGGTAACATTATTTTCCCTCCAATGGTCGGCTTACAGGC < 1:2266032/101‑1 AGATAAGATCGCGCGATATCATCGCTCTGGGCTTTAAGACATTTGCGTTGTTCGTCGGCGCAGGTAACATTATTTTCCCTCCAATGGTCGGCTTACAGGCA < 1:2108530/101‑1 GATAAGATCGCGCGATATCATCGCTCTGGGCTTTATGACATTTGCGTTGTTCGTCGGCGCAGGTAACATTATTTTCCCTCCAATGGTCGGCTTACAGGCAG < 2:1774789/101‑1 GATAAGATCGCGCGATATCATCGCTCTGGGCTTTATGACATTTGCGGTGTTCGTCGGCGCAGGTAACATTATTTTCCCTCCAATGGTCGGCGTACAGGCAG > 2:792685/1‑101 ATAAGATCGCGCGATATCATCGCTCTGGGCTTTATGACATTTGCGTTGTTCGTCGGCGCAGGTAACATTATTTTCCCTCCAATGGTCGGCTTACAGGCAGG > 2:3822145/1‑101 ||||| AATTGTTTAAATATACCGCTGTATCATCCCCAGGGATTGGCACAAAAATTTAACGTTACAACACCACATCCACAGGCAGTATGATTTATGACCCATCAAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > CP009273/414960‑415059‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TAAGATCGCGCGATATCATCGCTCTGGGCTTTATGACATTTGCGTTGTTCGTCGGCGCAGGTAACATTATTTTCCCTCCAATGGTCGGCTTACAGGCAGG > CP009273/415060‑415159 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |