| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC | CP009273 | 415,065 | (AAGAT)1→2 | coding (19/1320 nt) | brnQ → | branched‑chain amino acid transport system 2 carrier protein; LIV‑II transport system for Ile, Leu, and Val |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | = 415059 | 1 (0.010) | 189 (1.200) +TAAGA |
116/178 | 0.0 | 99.5% | coding (13/1320 nt) | brnQ | branched‑chain amino acid transport system 2 carrier protein; LIV‑II transport system for Ile, Leu, and Val |
| ? | CP009273 | 415060 = | 1 (0.010) | coding (14/1320 nt) | brnQ | branched‑chain amino acid transport system 2 carrier protein; LIV‑II transport system for Ile, Leu, and Val | |||||
Only 100 of 205 total aligned reads displayed.
AATTGTTTAAATATACCGCTGTATCATCCCCAGGGATTGGCACAAAAATTTAACGTTACAACACCACATCCACAGGCAGTATGATTTATGACCCATCAATTAAG‑‑‑‑‑ATCGCGCGATATCATCGCTCTGGGCTTTATGACATTTGCGTTGTTCGTCGGCGCAGGTAACATTATTTTCCCTCCAATGGTCGGCTTACAGGCAGG > CP009273/414960‑415159 | tttaaatataccgctgtatcatccccagggattggcacaaaaatttaacgttacaacaccacatccacaggcagtatgatttatgacccatcaattaagat > 2:3484937‑M2/101‑101 (MQ=255)tttaaatataccgctgtatcatccccagggattggcacaaaaatttaacgttacaacaccacatccacaggcagtatgatttatgacccatcaattaagat > 2:1154444‑M2/101‑101 (MQ=255)tttaaatataccgctgtatcatccccagggattggcacaaaaatttaacgttacaacaccacatccacaggcagtatgatttatgacccatcaattaagat < 2:1346475‑M2/1‑1 (MQ=255) taaatataccgctgtatcatccccagggattggcacaaaaatttaacgttacaacaccacatccacaggcagtatgatttatgacccatcaattaagataa > 1:50263‑M2/99‑101 (MQ=255) taaatataccgctgtatcatccccagggattggcacaaaaatttaacgttacaacaccacatccacaggcagtatgatttatgacccatcaattaagataa > 2:3227104‑M2/99‑101 (MQ=255) atataccgctgtatcatccccagggattggcacaaaaatttaacgttacaacaccacatccacaggcagtatgatttatgacccatcaattaagataag‑‑‑‑‑at < 2:1374365‑M2/6‑1 (MQ=255) tataccgctgtatcatccccagggattggcacaaaaatttaacgttacaacaccacatccacaggcagtatgatttatgacccatcaattaagaTAAG‑‑‑‑‑ATc < 1:3882637‑M2/7‑1 (MQ=255) ataccgctgtatcatccccagggattggcacaaaaatttaacgttacaacaccacatccacaggcagtatgatttatgacccatcaattaagaTAAG‑‑‑‑‑ATcg < 2:3679051‑M2/8‑1 (MQ=255) ataccgctgtatcatccccagggattggcacaaaaatttaacgttacaacaccacatccacaggcagtatgatttatgacccatcaattaagaTAAG‑‑‑‑‑ATcg > 1:1708204‑M2/94‑101 (MQ=255) accgctgtatcatccccagggattggcacaaaaatttaacgttacaacaccacatccacaggcagtatgatttatgacccatcaattaagaTAAG‑‑‑‑‑ATcgcg < 2:783729‑M2/10‑1 (MQ=255) accgctgtatcatccccagggattggcacaaaaatttaacgttacaacaccacatccacaggcagtatgatttatgacccatcaattaagaTAAG‑‑‑‑‑ATcgcg < 2:2807275‑M2/10‑1 (MQ=255) cgctgtatcatccccagggattggcacaaaaatttaacgttacaacaccacatccacaggcagtatgatttatgacccatcaattaagaTAAG‑‑‑‑‑ATcgcgcg > 1:1774789‑M2/90‑101 (MQ=255) cgctgtatcatccccagggattggcacaaaaatttaacgttacaacaccacatccacaggcagtatgatttatgacccatcaattaagaTAAG‑‑‑‑‑ATcgcgcg < 2:223958‑M2/12‑1 (MQ=255) gctgtatcatccccagggattggcacaaaaatttaacgttacaacaccacatccacaggcagtatgatttatgacccatcaattaagaTAAG‑‑‑‑‑ATCGCGCGa < 1:3595979‑M2/13‑1 (MQ=255) ctgtatcatccccagggattggcacaaaaatttaacgttacaacaccacatccacaggcagtatgatttatgacccatcaattaagaTAAG‑‑‑‑‑ATCGCGCGat > 2:399110‑M2/88‑101 (MQ=255) ctgtatcatccccagggattggcacaaaaatttaacgttacaacaccacatccacaggcagtatgatttatgacccatcaattaagaTAAG‑‑‑‑‑ATCGCGCGat > 1:3004913‑M2/88‑101 (MQ=255) ctgtatcatccccagggattggcacaaaaatttaacgttacaacaccacatccacaggcagtatgatttatgacccatcaattaagaTAAG‑‑‑‑‑ATCGCGCGat < 1:2302780‑M2/14‑1 (MQ=255) tgtatcatccccagggattggcacaaaaatttaacgttacaacaccacatccacaggcagtatgatttatgacccatcaattaagaTAAG‑‑‑‑‑ATCGCGCGata < 1:915097‑M2/15‑1 (MQ=255) atcatccccagggattggcacaaaaatttaacgttacaacaccacatccacaggcagtatgatttatgacccatcaattaagaTAAG‑‑‑‑‑ATCGCGCGATatca < 1:751644‑M2/18‑1 (MQ=255) tcatccccagggattggcacaaaaatttaacgttacaacaccacatccacaggcagtatgatttatgacccatcaattaagaTAAG‑‑‑‑‑ATCGCGCGATatcat < 2:3138213‑M2/19‑1 (MQ=255) catccccagggattggcacaaaaatttaacgttacaacaccacatccacaggcagtatgatttatgacccatcaattaagaTAAG‑‑‑‑‑ATCGCGCGATatcatc < 1:238462‑M2/20‑1 (MQ=255) atccccagggattggcacaaaaatttaacgttacaacaccacatccacaggcagtatgatttatgacccatcaattaagaTAAG‑‑‑‑‑ATCGCGCGATATCATCg > 2:2463586‑M2/81‑101 (MQ=255) atccccagggattggcacaaaaatttaacgttacaacaccacatccacaggcagtatgatttatgacccatcaattaagaTAAG‑‑‑‑‑ATCGCGCGATATCATCg > 1:3053354‑M2/81‑101 (MQ=255) atccccagggattggcacaaaaatttaacgttacaacaccacatccacaggcagtatgatttatgacccatcaattaagaTAAG‑‑‑‑‑ATCGCGCGATATCATCg < 1:689668‑M2/21‑1 (MQ=255) tccccagggattggcacaaaaatttaacgttacaacaccacatccacaggcagtatgatttatgacccatcaattaagaTAAG‑‑‑‑‑ATCGCGCGATATCATCGc > 1:2878876‑M2/80‑101 (MQ=255) tccccagggattggcacaaaaatttaacgttacaacaccacatccacaggcagtatgatttatgacccatcaattaagaTAAG‑‑‑‑‑ATCGCGCGATATCATCGc < 1:1938574‑M2/22‑1 (MQ=255) ccccagggattggcacaaaaatttaacgttacaacaccacatccacaggcagtatgatttatgacccatcaattaagaTAAG‑‑‑‑‑ATCGCGCGATATCATCGct > 1:281483‑M2/79‑101 (MQ=255) ccagggattggcacaaaaatttaacgttacaacaccacatccacaggcagtatgatttatgacccatcaattaagaTAAG‑‑‑‑‑ATCGCGCGATATCATCGctct < 1:3401697‑M2/25‑1 (MQ=255) cagggattggcacaaaaatttaacgttacaacaccacatccacaggcagtatgatttatgacccatcaattaagaTAAG‑‑‑‑‑ATCGCGCGATATCATCGCTCTg > 1:1788759‑M2/76‑101 (MQ=255) cagggattggcacaaaaatttaacgttacaacaccacatccacaggcagtatgatttatgacccatcaattaagaTAAG‑‑‑‑‑ATCGCGCGATATCATCGCTCTg < 2:2476073‑M2/26‑1 (MQ=255) cagggattggcacaaaaatttaacgttacaacaccacatccacaggcagtatgatttatgacccatcaattaagaTAAG‑‑‑‑‑ATCGCGCGATATCATCGCTCTg < 1:465609‑M2/26‑1 (MQ=255) cagggattggcacaaaaatttaacgttacaacaccacatccacaggcagtatgatttatgacccatcaattaagaTAAG‑‑‑‑‑ATCGCGCGATATCATCGCTCTg > 2:824594‑M2/76‑101 (MQ=255) agggattggcacaaaaatttaacgttacaacaccacatccacaggcagtatgatttatgacccatcaattaagaTAAG‑‑‑‑‑ATCGCGCGATATCATCGCTCTgg > 1:2437613‑M2/75‑101 (MQ=255) attggcacaaaaatttaacgttacaacaccacatccacaggcagtatgatttatgacccatcaattaagaTAAG‑‑‑‑‑ATCGCGCGATATCATCGCTCTGGGCtt > 2:1576375‑M2/71‑101 (MQ=255) tggcacaaaaatttaacgttacaacaccacatccacaggcagtatgatttatgacccatcaattaagaTAAG‑‑‑‑‑ATCGCGCGATATCATCGCTCTGGGCTTTa > 2:2932368‑M2/69‑101 (MQ=255) acaaaaatttaacgttacaacaccacatccacaggcagtatgatttatgacccatcaattaagaTAAG‑‑‑‑‑ATCGCGCGATATCATCGCTCTGGGCTTTATGAc < 2:1126962‑M2/37‑1 (MQ=255) caaaaatttaacgttacaacaccacatccacaggcagtatgatttatgacccatcaattaagaTAAG‑‑‑‑‑ATCGCGCGATATCATCGCTCTGGGCTTTATGACa > 2:1282625‑M2/64‑101 (MQ=255) aaaaatttaacgttacaacaccacatccacaggcagtatgatttatgacccatcaattaagaTAAG‑‑‑‑‑ATCGCGCGATATCATCGCTCTGGGCTTTATGACAt > 2:2533416‑M2/63‑101 (MQ=255) aaatttaacgttacaacaccacatccacaggcagtatgatttatgacccatcaattaagaTAAG‑‑‑‑‑ATCGCGCGATATCATCGCTCTGGGCTTTATGACAttt < 2:21144‑M2/41‑1 (MQ=255) atttaacgttacaacaccacatccacaggcagtatgatttatgacccatcaattaagaTAAG‑‑‑‑‑ATCGCGCGATATCATCGCTCTGGGCTTTATGACATTTGc < 2:633792‑M2/43‑1 (MQ=255) atttaacgttacaacaccacatccacaggcagtatgatttatgacccatcaattaagaTAAG‑‑‑‑‑ATCGCGCGATATCATCGCTCTGGGCTTTATGACATTTGc > 2:1834461‑M2/59‑101 (MQ=255) atttaacgttacaacaccacatccacaggcagtatgatttatgacccatcaattaagaTAAG‑‑‑‑‑ATCGCGCGATATCATCGCTCTGGGCTTTATGACATTTGc < 1:1600911‑M2/43‑1 (MQ=255) tttaacgttacaacaccacatccacaggcagtatgatttatgacccatcaattaagaTAAG‑‑‑‑‑ATCGCGCGATATCATCGCTCTGGGCTTTATGACATTTGCg > 2:1324252‑M2/58‑101 (MQ=255) tttaacgttacaacaccacatccacaggcagtatgatttatgacccatcaattaagaTAAG‑‑‑‑‑ATCGCGCGATATCATCGCTCTGGGCTTTATGACATTTGCg < 2:1222666‑M2/44‑1 (MQ=255) taacgttacaacaccacatccacaggcagtatgatttatgacccatcaattaagaTAAG‑‑‑‑‑ATCGCGCGATATCATCGCTCTGGGCTTTATGACATTTGCgtt < 1:1480015‑M2/46‑1 (MQ=255) aacgttacaacaccacatccacaggcagtatgatttatgacccatcaattaagaTAAG‑‑‑‑‑ATCGCGCGATATCATCGCTCTGGGCTTTATGACATTTGCgttg > 1:538886‑M2/55‑101 (MQ=255) aacgttacaacaccacatccacaggcagtatgatttatgacccatcaattaagaTAAG‑‑‑‑‑ATCGCGCGATATCATCGCTCTGGGCTTTATGACATTTGCgttg < 1:2885399‑M2/47‑1 (MQ=255) acgttacaacaccacatccacaggcagtatgatttatgacccatcaattaagaTAAG‑‑‑‑‑ATCGCGCGATATCATCGCTCTGGGCTTTATGACATTTGCgttgt > 1:1679397‑M2/54‑101 (MQ=255) cgttacaacaccacatccacaggcagtatgatttatgacccatcaattaagaTAAG‑‑‑‑‑ATCGCGCGATATCATCGCTCTGGGCTTTATGACATTTGCgttgtt > 1:2523684‑M2/53‑101 (MQ=255) tacaacaccacatccacaggcagtatgatttatgacccatcaattaagaTAAG‑‑‑‑‑ATCGCGCGATATCATCGCTCTGGGCTTTATGACATTTGCGTTGTtcgt > 1:1578272‑M2/50‑101 (MQ=255) aacaccacatccacaggcagtatgatttatgacccatcaattaagaTAAG‑‑‑‑‑ATCGCGCGATATCATCGCTCTGGGCTTTATGACATTTGCGTTGTTCGTCgg < 1:3430610‑M2/55‑1 (MQ=255) caccacatccacaggcagtatgatttatgacccatcaattaagaTAAG‑‑‑‑‑ATCGCGCGATATCATCGCTCTGGGCTTTATGACATTTGCGTTGTTCGTCGgcg < 2:1308138‑M2/57‑1 (MQ=255) accacatccacaggcagtatgatttatgacccatcaattaagaTAAG‑‑‑‑‑ATCGCGCGATATCATCGCTCTGGGCTTTATGACATTTGCGTTGTTCGTCGgcgc > 2:3789782‑M2/44‑101 (MQ=255) cacatccacaggcagtatgatttatgacccatcaattaagaTAAG‑‑‑‑‑ATCGCGCGATATCATCGCTCTGGGCTTTATGACATTTGCGTTGTTCGTCGGCGCAg > 2:1698509‑M2/42‑101 (MQ=255) acatccacaggcagtatgatttatgacccatcaattaagaTAAG‑‑‑‑‑ATCGCGCGATATCATCGCTCTGGGCTTTATGACATTTGCGTTGTTCGTCGGCGCAgg < 2:3312581‑M2/61‑1 (MQ=255) acatccacaggcagtatgatttatgacccatcaattaagaTAAG‑‑‑‑‑ATCGCGCGATATCATCGCTCTGGGCTTTATGACATTTGCGTTGTTCGTCGGCGCAgg < 2:3707589‑M2/61‑1 (MQ=255) catccacaggcagtatgatttatgacccatcaattaagaTAAG‑‑‑‑‑ATCGCGCGATATCATCGCTCTGGGCTTTATGACATTTGCGTTGTTCGTCGGCGCAGGt < 1:263411‑M2/62‑1 (MQ=255) atccacaggcagtatgatttatgacccatcaattaagaTAAG‑‑‑‑‑ATCGCGCGATATCATCGCTCTGGGCTTTATGACATTTGCGTTGTTCGTCGGCGCAGGTa > 2:1294963‑M2/39‑101 (MQ=255) ccacaggcagtatgatttatgacccatcaattaagaTAAG‑‑‑‑‑ATCGCGCGATATCATCGCTCTGGGCTTTATGACATTTGCGTTGTTCGTCGGCGCAGGTAAc > 1:1016640‑M2/37‑101 (MQ=255) cacaggcagtatgatttatgacccatcaattaagaTAAG‑‑‑‑‑ATCGCGCGATATCATCGCTCTGGGCTTTATGACATTTGCGTTGTTCGTCGGCGCAGGTAACa > 1:3589368‑M2/36‑101 (MQ=255) acaggcagtatgatttatgacccatcaattaagaTAAG‑‑‑‑‑ATCGCGCGATATCATCGCTCTGGGCTTTATGACATTTGCGTTGTTCGTCGGCGCAGGTAACat > 2:3899987‑M2/35‑101 (MQ=255) caggcagtatgatttatgacccatcaattaagaTAAG‑‑‑‑‑ATCGCGCGATATCATCGCTCTGGGCTTTATGACATTTGCGTTGTTCGTCGGCGCAGGTAACatt < 1:727563‑M2/68‑1 (MQ=255) caggcagtatgatttatgacccatcaattaagaTAAG‑‑‑‑‑ATCGCGCGATATCATCGCTCTGGGCTTTATGACATTTGCGTTGTTCGTCGGCGCAGGTAACatt < 1:1885314‑M2/68‑1 (MQ=255) caggcagtatgatttatgacccatcaattaagaTAAG‑‑‑‑‑ATCGCGCGATATCATCGCTCTGGGCTTTATGACATTTGCGTTGTTCGTCGGCGCAGGTAACatt > 1:1995016‑M2/34‑101 (MQ=255) gcagtatgatttatgacccatcaattaagaTAAG‑‑‑‑‑ATCGCGCGATATCATCGCTCTGGGCTTTATGACATTTGCGTTGTTCGTCGGCGCAGGTAACattatt < 2:2423915‑M2/71‑1 (MQ=255) cagtatgatttatgacccatcaattaagaTAAG‑‑‑‑‑ATCGCGCGATATCATCGCTCTGGGCTTTATGACATTTGCGTTGTTCGTCGGCGCAGGTAACATTAttt > 1:62681‑M2/30‑101 (MQ=255) agtatgatttatgacccatcaattaagaTAAG‑‑‑‑‑ATCGCGCGATATCATCGCTCTGGGCTTTATGACATTTGCGTTGTTCGTCGGCGCAGGTAACATTAtttt > 1:112423‑M2/29‑101 (MQ=255) gtatgatttatgacccatcaattaagaTAAG‑‑‑‑‑ATCGCGCGATATCATCGCTCTGGGCTTTATGACATTTGCGTTGTTCGTCGGCGCAGGTAACATTATTTTc > 1:3093712‑M2/28‑101 (MQ=255) gtatgatttatgacccatcaattaagaTAAG‑‑‑‑‑ATCGCGCGATATCATCGCTCTGGGCTTTATGACATTTGCGTTGTTCGTCGGCGCAGGTAACATTATTTTc > 1:2258534‑M2/28‑101 (MQ=255) tatgatttatgacccatcaattaagaTAAG‑‑‑‑‑ATCGCGCGATATCATCGCTCTGGGCTTTATGACATTTGCGTTGTTCGTCGGCGCAGGTAACATTATTTTcc > 1:1462155‑M2/27‑101 (MQ=255) cAGTATGATTTATGACCCATCCATTAAGATAACATCGCGCGATATCATCTCTCTGGGCTTTATGCCATTTTCATTGTTCGTCGGCGCACGCAACATTAttt > 2:1420939/1‑101 (MQ=255) gatttatgacccatcaattaagaTAAG‑‑‑‑‑ATCGCGCGATATCATCGCTCTGGGCTTTATGACATTTGCGTTGTTCGTCGGCGCAGGTAACATTATTTTCCCTc < 2:481701‑M2/78‑1 (MQ=255) gatttatgacccatcaattaagaTAAG‑‑‑‑‑ATCGCGCGATATCATCGCTCTGGGCTTTATGACATTTGCGTTGTTCGTCGGCGCAGGTAACATTATTTTCCCTc > 1:3189017‑M2/24‑101 (MQ=255) tttatgacccatcaattaagaTAAG‑‑‑‑‑ATCGCGCGATATCATCGCTCTGGGCTTTATGACATTTGCGTTGTTCGTCGGCGCAGGTAACATTATTTTCCCTCCa < 2:1138419‑M2/80‑1 (MQ=255) ttatgacccatcaattaagaTAAG‑‑‑‑‑ATCGCGCGATATCATCGCTCTGGGCTTTATGACATTTGCGTTGTTCGTCGGCGCAGGTAACATTATTTTCCCTCCaa > 1:139433‑M2/21‑101 (MQ=255) tatgacccatcaattaagaTAAG‑‑‑‑‑ATCGCGCGATATCATCGCTCTGGGCTTTATGACATTTGCGTTGTTCGTCGGCGCAGGTAACATTATTTTCCCTCCAAt > 2:2098959‑M2/20‑101 (MQ=255) atgacccatcaattaagaTAAG‑‑‑‑‑ATCGCGCGATATCATCGCTCTGGGCTTTATGACATTTGCGTTGTTCGTCGGCGCAGGTAACATTATTTTCCCTCCAATg < 1:2216622‑M2/83‑1 (MQ=255) atgacccatcaattaagaTAAG‑‑‑‑‑ATCGCGCGATATCATCGCTCTGGGCTTTATGACATTTGCGTTGTTCGTCGGCGCAGGTAACATTATTTTCCCTCCAATg < 2:2890889‑M2/83‑1 (MQ=255) tgacccatcaattaagaTAAG‑‑‑‑‑ATCGCGCGATATCATCGCTCTGGGCTTTATGACATTTGCGTTGTTCGTCGGCGCAGGTAACATTATTTTCCCTCCAATgg < 1:1732362‑M2/84‑1 (MQ=255) gacccatcaattaagaTAAG‑‑‑‑‑ATCGCGCGATATCATCGCTCTGGGCTTTATGACATTTGCGTTGTTCGTCGGCGCAGGTAACATTATTTTCCCTCCAATGGt < 2:2669634‑M2/85‑1 (MQ=255) gacccatcaattaagaTAAG‑‑‑‑‑ATCGCGCGATATCATCGCTCTGGGCTTTATGACATTTGCGTTGTTCGTCGGCGCAGGTAACATTATTTTCCCTCCAATGGt > 2:2991534‑M2/17‑101 (MQ=255) acccatcaattaagaTAAG‑‑‑‑‑ATCGCGCGATATCATCGCTCTGGGCTTTATGACATTTGCGTTGTTCGTCGGCGCAGGTAACATTATTTTCCCTCCAATGGTc < 2:2714667‑M2/86‑1 (MQ=255) acccatcaattaagaTAAG‑‑‑‑‑ATCGCGCGATATCATCGCTCTGGGCTTTATGACATTTGCGTTGTTCGTCGGCGCAGGTAACATTATTTTCCCTCCAATGGTc < 2:1827478‑M2/86‑1 (MQ=255) acccatcaattaagaTAAG‑‑‑‑‑ATCGCGCGATATCATCGCTCTGGGCTTTATGACATTTGCGTTGTTCGTCGGCGCAGGTAACATTATTTTCCCTCCAATGGTc < 1:3876597‑M2/86‑1 (MQ=255) cccatcaattaagaTAAG‑‑‑‑‑ATCGCGCGATATCATCGCTCTGGGCTTTATGACATTTGCGTTGTTCGTCGGCGCAGGTAACATTATTTTCCCTCCAATGGTCg > 1:2116748‑M2/15‑101 (MQ=255) tcaattaagaTAAG‑‑‑‑‑ATCGCGCGATATCATCGCTCTGGGCTTTATGACATTTGCGTTGTTCGTCGGCGCAGGTAACATTATTTTCCCTCCAATGGTCGGCtt < 2:3942305‑M2/91‑1 (MQ=255) caattaagaTAAG‑‑‑‑‑ATCGCGCGATATCATCGCTCTGGGCTTTATGACATTTGCGTTGTTCGTCGGCGCAGGTAACATTATTTTCCCTCCAATGGTCGGCTTa < 1:3534181‑M2/92‑1 (MQ=255) attaagaTAAG‑‑‑‑‑ATCGCGCGATATCATCGCTCTGGGCTTTATGACATTTGCGTTGTTCGTCGGCGCAGGTAACATTATTTTCCCTCCAATGGTCGGCTTAca < 2:2631431‑M2/94‑1 (MQ=255) ttaagaTAAG‑‑‑‑‑ATCGCGCGATATCATCGCTCTGGGCTTTATGACATTTGCGTTGTTCGTCGGCGCAGGTAACATTATTTTCCCTCCAATGGTCGGCTTacat < 2:1894058‑M2/95‑2 (MQ=255) ttaagaTAAG‑‑‑‑‑ATCGCGCGATATCATCGCTCTGGGCTTTATGACATTTGCGTTGTTCGTCGGCGCAGGTAACATTATTTTCCCTCCAATGGTCGGCTTAcag > 2:2316448‑M2/7‑101 (MQ=255) taagaTAAG‑‑‑‑‑ATCGCGCGATATCATCGCTCTGGGCTTTATGACATTTGCGTTGTTCGTCGGCGCAGGTAACATTATTTTCCCTCCAATGGTCGGCTTAcagg < 1:824594‑M2/96‑1 (MQ=255) taagaTAAG‑‑‑‑‑ATCGCGCGATATCATCGCTCTGGGCTTTATGACATTTGCGTTGTTCGTCGGCGCAGGTAACATTATTTTCCCTCCAATGGTCGGCTTAcagg < 2:2968495‑M2/96‑1 (MQ=255) aagaTAAG‑‑‑‑‑ATCGCGCGATATCATCGCTCTGGGCTTTATGACATTTGCGTTGTTCGTCGGCGCAGGTAACATTATTTTCCCTCCAATGGTCGGCTTAcaggc < 1:2266032‑M2/97‑1 (MQ=255) agaTACG‑‑‑‑‑ATCGCGCGATATCATCGCTCTGGGCTTTATGACATTTGCGTTGTTCGTCGGCGCAGGTAACATTATTTTCCCTCCAATGGTCGGCTTAcaggca < 1:2468657‑M2/98‑1 (MQ=255) agaTAAG‑‑‑‑‑ATCGCGCGATATCATCGCTCTGGGCTTTATGACATTTGCGTTGTTCGTCGGCGCAGGTAACATTATTTTCCCTCCAATGGTCGGCTTAcaggca < 2:1526894‑M2/98‑1 (MQ=255) agaTAAG‑‑‑‑‑ATCGCGCGATATCATCGCTCTGGGCTTTATGACATTTGCGTTGTTCGTCGGCGCAGGTAACATTATTTTCCCTCCAATGGTCGGCTTAcaggca > 2:2293498‑M2/4‑101 (MQ=255) agaTAAG‑‑‑‑‑ATCGCGCGATATCATCGCTCTGGGCTTTATGACATTTGCGTTGTTCGTCGGCGCAGGTAACATTATTTTCCCTCCAATGGTCGGCTTAcaggca > 1:2138993‑M2/4‑101 (MQ=255) gaTAAG‑‑‑‑‑ATCGCGCGATATCATCGCTCTGGGCTTTATGACATTTGCGGTGTTCGTCGGCGCAGGTAACATTATTTTCCCTCCAATGGTCGGCGTAcaggcag > 2:792685‑M2/3‑101 (MQ=255) aTAAG‑‑‑‑‑ATCGCGCGATATCATCGCTCTGGGCTTTATGACATTTGCGTTGTTCGTCGGCGCAGGTAACATTATTTTCCCTCCAATGGTCGGCTTAcaggcagg < 1:870578‑M2/100‑1 (MQ=255) aTAAG‑‑‑‑‑ATCGCGCGATATCATCGCTCTGGGCTTTATGACATTTGCGTTGTTCGTCGGCGCAGGTAACATTATTTTCCCTCCAATGGTCGGCTTAcaggcagg > 2:3822145‑M2/2‑101 (MQ=255) | AATTGTTTAAATATACCGCTGTATCATCCCCAGGGATTGGCACAAAAATTTAACGTTACAACACCACATCCACAGGCAGTATGATTTATGACCCATCAATTAAG‑‑‑‑‑ATCGCGCGATATCATCGCTCTGGGCTTTATGACATTTGCGTTGTTCGTCGGCGCAGGTAACATTATTTTCCCTCCAATGGTCGGCTTACAGGCAGG > CP009273/414960‑415159 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |