| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 1662553 = | 7 (0.040) | 190 (1.150) | 118/200 | 0.1 | 96.5% | coding (269/1221 nt) | mlc | glucosamine anaerobic growth regulon transcriptional repressor; autorepressor |
| ? | CP009273 | = 1662559 | NA (NA) | coding (263/1221 nt) | mlc | glucosamine anaerobic growth regulon transcriptional repressor; autorepressor | |||||
Only 100 of 198 total aligned reads displayed.
TGGCAAGTCATCTTTTAACGCCAGTTCCTGCGACTCTTCCACCACCAGTTTGCTGCTCAGATCGCGCAGAGCAAGGAAAATCTCCCCGCGACTAATGCGCAGAGAAAGATAGTGCCAGGCTTCAGTTTCAACCACCAGCCCCACCGCCGGACGGCCACGGTTCCCCGCTTCTTTGATTTCCAGCTCTTGCACCAGGTGTGC > CP009273/1662453‑1662653 | tGGCAAGTCATCTTTTAACGCCAGTTCCTGCGACTCTTCCACCACCAGTTTGCTGCTCAGATCGCGCAGAGCAAGGAAAATCTCCCCGCGACTAATGCGCa < 2:131526/101‑1 (MQ=255)tGGCAAGTCATCTTTTAACGCCAGTTCCTGCGACTCTTCCACCACCAGTTTGCTGCTCAGATCGCGCAGAGCAAGGAAAATCTCCCCGCGACTAATGCGCa < 1:1995201/101‑1 (MQ=255) catcttttaacgccagttcctgcgactcttccaccaccagtttgctgctcagatcgcgcagagcaaggaaaatctccccgcgactaatgcggagagaaaag < 1:3753853‑M1/2‑1 (MQ=255) catcttttaacgccagttcctgcgactcttccaccaccagtttgctgctcagatcgcgcagagcaaggaaaatctccccgcgactaatgcgcagagaaaag > 1:1101735‑M1/100‑101 (MQ=255) catcttttaacgccagttcctgcgactcttccaccaccagtttgctgctcagatcgcgcagagcaaggaaaatctccccgcgactaatgcgcagagaaaag < 2:2983006‑M1/2‑1 (MQ=255) catcttttaacgccagttcctgcgactcttccaccaccagtttgctgctcagatcgcgcagagcaaggaaaatctccccgcgactaatgcgcagagaaaag < 1:3704294‑M1/2‑1 (MQ=255) gCAAGTCATCTTTTAACGCCAGTTCCTGCGACTCTTCCACCACCAGTTTGCTGCTCAGATCGCGCAGAGCAAGGAAAATCTCCCCGCGACTAATGCGCaga > 2:2621222/1‑101 (MQ=255) ttttaacgccagttcctgcgactcttccaccaccagtttgctgctcagatcgcgcagagcaaggaaaatctccccgcgactaatgcgcagagaaaagagaa > 2:1636969‑M1/96‑101 (MQ=255) ttttaacgccagttcctgcgactcttccaccaccagtttgctgctcagatcgcgcagagcaaggaaaatctccccgcgactaatgcgcagagaaaagagaa > 1:2439375‑M1/96‑101 (MQ=255) gTCATCTTTTAACGCCAGTTCCTGCGACTCTTCCACCACCAGTTTGCTGCTCAGATCGCGCAGAGCAAGGAAAATCTCCCCGCGACTAATGCGCAGAGaaa < 2:2792754/101‑1 (MQ=255) taacgccagttcctgcgactcttccaccaccagtttgctgctcagatcgcgcagagcaaggaaaatctccccgcgactaatgcgcagagaaaAGAGAAAGa > 2:26580‑M1/93‑101 (MQ=255) aacgcccgttcctgcgactcttccaccaccagtttgctgctcagatcgcgcagagcaaggaaaatctccccgcgactaatgcgcagagaaaAGAGAAAGAt > 1:667151‑M1/92‑101 (MQ=255) aacgccagttcctgcgactcttccaccaccagtttgctgctcagatcgcgcagagcaaggaaaatctccccgcgactaatgcgcagagaaaAGAGAAAGAt < 2:1911745‑M1/10‑1 (MQ=255) gccagttcctgcgactcttccaccaccagtttgctgctcagatcgcgcagagcaaggaaaatctccccgcgactaatgcgcagagaaaAGAGAAAGATAGt < 2:2755936‑M1/13‑1 (MQ=255) gccagttcctgcgactcttccaccaccagtttgctgctcagatcgcgcagagcaaggaaaatctccccgcgactaatgcgcagagaaaAGAGAAAGATAGt > 1:806412‑M1/89‑101 (MQ=255) ccagttcctgcgactcttccaccaccagtttgctgctcagatcgcgcagagcaaggaaaatctccccgcgactaatgcgcagagaaaAGAGAAAGATAGTg < 2:2141881‑M1/14‑1 (MQ=255) ccagttcctgcgactcttccaccaccagtttgctgctcagatcgcgcagagcaaggaaaatctccccgcgactaatgcgcagagaaaAGAGAAAGATAGTg > 1:3470781‑M1/88‑101 (MQ=255) cagttcctgcgactcttccaccaccagtttgctgctcagatcgcgcagagcaaggaaaatctccccgcgactaatgcgcagagaaaAGAGAAAGATAGTGc > 2:3806521‑M1/87‑101 (MQ=255) agttcctgcgactcttccaccaccagtttgctgctcagatcgcgcagagcaaggaaaatctccccgcgactaatgcgcagagaaaAGAGAAAGATAGTGcc < 2:1023576‑M1/16‑1 (MQ=255) gttcctgcgactcttccaccaccagtttgctgctcagatcgcgcagagcaaggaaaatctccccgcgactaatgcgcagagaaaAGAGAAAGATAGTGCCa > 2:3422710‑M1/85‑101 (MQ=255) gttcctgcgactcttccaccaccagtttgctgctcagatcgcgcagagcaaggaaaatctccccgcgactaatgcgcagagaaaAGAGAAAGATAGTGCCa < 2:2116354‑M1/17‑1 (MQ=255) cctgcgactcttccaccaccagtttgctgctcagatcgcgcagagcaaggaaaatctccccgcgactaatgcgcagagaaaAGAGAAAGATAGTGCCAGGc > 2:1206102‑M1/82‑101 (MQ=255) ctgcgactcttccaccaccagtttgctgctcagatcgcgcagagcaaggaaaatctccccgcgactaatgcgcagagaaaAGAGAAAGATAGTGCCAGGCt > 2:850808‑M1/81‑101 (MQ=255) cgactcttccaccaccagtttgctgctcagatcgcgcagagcaaggaaaatctccccgcgactaatgcgcagagaaaAGAGAAAGATAGTGCCAGGCTTCa < 2:2375821‑M1/24‑1 (MQ=255) cgactcttccaccaccagtttgctgctcagatcgcgcagagcaaggaaaatctccccgcgactaatgcgcagagaaaAGAGAAAGATAGTGCCAGGCTTCa > 1:3555691‑M1/78‑101 (MQ=255) actcttccaccaccagtttgctgctcagatcgcgcagagcaaggaaaatctccccgcgactaatgcgcagagaaaAGAGAAAGATAGTGCCAGGCTTCAGt < 1:1012533‑M1/26‑1 (MQ=255) actcttccaccaccagtttgctgctcagatcgcgcagagcaaggaaaatctccccgcgactaatgcgcagagaaaAGAGAAAGATAGTGCCAGGCTTCAGt < 2:3045267‑M1/26‑1 (MQ=255) ctcttccaccaccagtttgctgctcagatcgcgcagagcaaggaaaatctccccgcgactaatgcgcagagaaaAGAGAAAGATAGTGCCAGGCTTCAGtt < 1:2647377‑M1/27‑1 (MQ=255) ctcttccaccaccagtttgctgctcagatcgcgcagagcaaggaaaatctccccgcgactaatgcgcagagaaaAGAGAAAGATAGTGCCAGGCTTCAGtt < 2:1567567‑M1/27‑1 (MQ=255) ctcttccaccaccagtttgctgctcagatcgcgcagagcaaggaaaatctccccgcgactaatgcgcagagaaaAGAGAAAGATAGTGCCAGGCTTCAGtt > 2:674627‑M1/75‑101 (MQ=255) ctcttccaccaccagtttgctgctcagatcgcgcagagcaaggaaaatctccccgcgactaatgcgcagagaaaAGAGAAAGATAGTGCCAGGCTTCAGtt > 1:579145‑M1/75‑101 (MQ=255) cttccaccaccagtttgctgctcagatcgcgcagagcaaggaaaatctccccgcgactaatgcgcagagaaaAGAGAAAGATAGTGCCAGGCTTCAGTTTc < 2:1106091‑M1/29‑1 (MQ=255) ttccaccaccagtttgctgctcagatcgcgcagagcaaggaaaatctccccgcgactaatgcgcagagaaaAGAGAAAGATAGTGCCAGGCTTCAGTTTCa > 2:994584‑M1/72‑101 (MQ=255) caccaccagtttgctgctcagatcgcgcagagcaaggaaaatctccccgcgactaatgcgcagagaaaAGAGAAAGATAGTGCCAGGCTTCAGTTTCAacc < 1:713011‑M1/33‑1 (MQ=255) caccaccagtttgctgctcagatcgcgcagagcaaggaaaatctccccgcgactaatgcgcagagaaaAGAGAAAGATAGTGCCAGGCTTCAGTTTCAacc > 2:1079079‑M1/69‑101 (MQ=255) accaccagtttgctgctcagatcgcgcagagcaaggaaaatctccccgcgactaatgcgcagagaaaAGAGAAAGATAGTGCCAGGCTTCAGTTTCAacca < 2:2519698‑M1/34‑1 (MQ=255) ccaccagtttgctgctcagatcgcgcagagcaaggaaaatctccccgcgactaatgcgcagagaaaAGAGAAAGATAGTGCCAGGCTTCAGTTTCAaccac < 2:2145772‑M1/35‑1 (MQ=255) accagtttgctgctcagatcgcgcagagcaaggaaaatctccccgcgactaatgcgcagagaaaAGAGAAAGATAGTGCCa > 2:2299848‑M1/65‑81 (MQ=255) cagtttgctgctcagatcgcgcagagcaaggaaaatctccccgcgactaatgcgcagagaaaAGAGAAAGATAGTGCCAGGCTTCAGTTTCAACCACCAGc < 1:2901348‑M1/39‑1 (MQ=255) cagtttgctgctcagatcgcgcagagcaaggaaaatctccccgcgactaatgcgcagagaaaAGAGAAAGATAGTGCCAGGCTTCAGTTTCAACCACCAGc > 2:3923553‑M1/63‑101 (MQ=255) agtttgctgctcagatcgcgcagagcaaggaaaatctccccgcgactaatgcgcagagaaaAGAGAAAGATAGTGCCAGGCTTCAGTTTCAACCACCAGcc < 2:1857116‑M1/40‑1 (MQ=255) tttgctgctcagatcgcgcagagcaaggaaaatctccccgcgactaatgcgcagagaaaAGAGAAAGATAGTGCCAGGCTTCAGTTTCAACCACCAGcccc < 1:2813779‑M1/42‑1 (MQ=255) tttgctgctcagatcgcgcagagcaaggaaaatctccccgcgactaatgcgcagagaaaAGAGAAAGATAGTGCCAGGCTTCAGTTTCAACCACCAGcccc > 1:3211529‑M1/60‑101 (MQ=255) ttgctgctcagatcgcgcagagcaaggaaaatctccccgcgactaatgcgcagagaaaAGAGAAAGATAGTGCCAGGCTTCAGTTTCAACCACCAGCCCCa > 1:2181935‑M1/59‑101 (MQ=255) tgctgctcagatcgcgcagagcaaggaaaatctccccgcgactaatgcgcagagaaaAGAGAAAGATAGTGCCAGGCTTCAGTTTCAACCACCAGCCCCAc > 2:2858829‑M1/58‑101 (MQ=255) ctgctcagatcgcgcagagcaaggaaaatctccccgcgactaatgcgcagagaaaAGAGAAAGATAGTGCCAGGCTTCAGTTTCAACCACCAGCCCCAccg > 2:1508113‑M1/56‑101 (MQ=255) tgctcagatcgcgcagagcaaggaaaatctccccgcgactaatgcgcagagaaaAGAGAAAGATAGTGCCAGGCTTCAGTTTCAACCACCAGCCCCAccgc > 1:1838175‑M1/55‑101 (MQ=255) tgctcagatcgcgcagagcaaggaaaatctccccgcgactaatgcgcagagaaaAGAGAAAGATAGTACCAGGCTTCAGTTTCAACCACCAGCCCCAccgc < 2:2476955‑M1/47‑1 (MQ=255) gctcagatcgcgcagagcaaggaaaatctccccgcgactaatgcgcagagaaaAGAGAAAGATAGTGCCAGGCTTCAGTTTCAACCACCAGCCCCAccgcc > 2:2236336‑M1/54‑101 (MQ=255) ctcagatcgcgcagagcaaggaaaatctccccgcgactaatgcgcagagaaaAGAGAAAGATAGTGCCAGGCTTCAGTTTCAACCACCAGCCCCAccgccg > 2:117239‑M1/53‑101 (MQ=255) tcagatcgcgcagagcaaggaaaatctccccgcgactaatgcgcagagaaaAGAGAAAGATAGTGCCAGGCTTCAGTTTCAACCACCAGCCCCACCGCCgg > 2:495092‑M1/52‑101 (MQ=255) cagatcgcgcagagcaaggaaaatctccccgcgactaatgcgcagagaaaAGAGAAAGATAGTGCCAGGCTTCAGTTTCAACCACCAGCCCCACCGCCGGa < 2:1480881‑M1/51‑1 (MQ=255) cagatcgcgcagagcaaggaaaatctccccgcgactaatgcgcagagaaaAGAGAAAGATAGTGCCAGGCTTCAGTTTCAACCACCAGCCCCACCGCCGGa < 1:3966652‑M1/51‑1 (MQ=255) agatcgcgcagagcaaggaaaatctccccgcgactaatgcgcagagaaaAGAGAAAGATAGTGCCAGGCTTCAGTTTCAACCACCAGCCCCACCGCCGGAc > 1:1895411‑M1/50‑101 (MQ=255) agatcgcgcagagcaaggaaaatctccccgcgactaatgcgcagagaaaAGAGAAAGATAGTGCCAGGCTTCAGTTTCAACCACCAGCCCCACCGCCGGAc > 2:908455‑M1/50‑101 (MQ=255) gatcgcgcagagcaaggaaaatctccccgcgactaatgcgcagagaaaAGAGAAAGATAGTGCCAGGCTTCAGTTTCAACCACCAGCCCCACCGCCGGACg > 1:32468‑M1/49‑101 (MQ=255) gatcgcgcagagcaaggaaaatctccccgcgactaatgcgcagagaaaAGAGAAAGATAGTGCCAGGCTTCAGTTTCAACCACCAGCCCCACCGCCGGACg > 2:95480‑M1/49‑101 (MQ=255) atcgcgcagagcaaggaaaatctccccgcgactaatgcgcagagaaaAGAGAAAGATAGTGCCAGGCTTCAGTTTCAACCACCAGCCCCACCGCCGGACgg < 2:1951931‑M1/54‑1 (MQ=255) tcgcgcagagcaaggaaaatctccccgcgactaatgcgcagagaaaAGAGAAAGATAGTGCCAGGCTTCAGTTTCAACCACCAGCCCCACCGCCGGACGGc < 2:3817351‑M1/55‑1 (MQ=255) gcgcagagcaaggaaaatctccccgcgactaatgcgcagagaaaAGAGAAAGATAGTGCCAGGCTTCAGTTTCAACCACCAGCCCCACCGCCGGACGGCCa < 2:2624332‑M1/57‑1 (MQ=255) gcgcagagcaaggaaaatctccccgcgactaatgcgcagagaaaAGAGAAAGATAGTGCCAGGCTTCAGTTTCAACCACCAGCCCCACCGCCGGACGGCCa > 2:2285590‑M1/45‑101 (MQ=255) cgcagagcaaggaaaatctccccgcgactaatgcgcagagaaaAGAGAAAGATAGTGCCAGGCTTCAGTTTCAACCACCAGCCCCACCGCCGGACGGCCAc > 2:282587‑M1/44‑101 (MQ=255) gcagagcaaggaaaatctccccgcgactaatgcgcagagaaaAGAGAAAGATAGTGCCAGGCTTCAGTTTCAACCACCAGCCCCACCGCCGGACGGCCACg > 1:2915458‑M1/43‑101 (MQ=255) cagagcaaggaaaatctccccgcgactaatgcgcagagaaaAGAGAAAGATAGTGCCAGGCTTCAGTTTCAACCACCAGCCCCACCGCCGGACGGCCACgg > 2:2394898‑M1/42‑101 (MQ=255) cagagcaaggaaaatctccccgcgactaatgcgcagagaaaAGAGAAAGATAGTGCCAGGCTTCAGTTTCAACCACCAGCCCCACCGCCGGACGGCCACgg > 1:1293584‑M1/42‑101 (MQ=255) cagagcaaggaaaatctccccgcgactaatgcgcagagaaaAGAGAAAGATAGTGCCAGGCTTCAGTTTCAACCACCAGCCCCACCGCCGGACGGCCACgg > 2:961121‑M1/42‑101 (MQ=255) cagagcaaggaaaatctccccgcgactaatgcgcagagaaaAGAGAAAGATAGTGCCAGGCTTCAGTTTCAACCACCAGCCCCACCGCCGGACGGCCACgg < 1:3675183‑M1/60‑1 (MQ=255) cagagcaaggaaaatctccccgcgactaatgcgcagagaaaAGAGAAAGATAGTGCCAGGCTTCAGTTTCAACCACCAGCCCCACCGCCGGACGGCCACgg < 1:267112‑M1/60‑1 (MQ=255) agagcaaggaaaatctccccgcgactaatgcgcagagaaaAGAGAAAGATAGTGCCAGGCTTCAGTTTCAACCACCAGCCCCACCGCCGGACGGCCACGGt < 1:2020553‑M1/61‑1 (MQ=255) agcaaggaaaatctccccgcgactaatgcgcagagaaaAGAGAAAGATAGTGCCAGGCTTCAGTTTCAACCACCAGCCCCACCGCCGGACGGCCACGGTTc > 1:2980638‑M1/39‑101 (MQ=255) gaaaatctccccgcgactaatgcgcagagaaaAGAGAAAGATAGTGCCAGGCTTCAGTTTCAACCACCAGCCCCACCGCCGGACGGCCACGGTTCCCCGct > 1:2116354‑M1/33‑101 (MQ=255) aaaatctccccgcgactaatgcgcagagaaaAGAGAAAGATAGTGTCAGGCTTCAGTTTCAACCGCCAGCCCCACCGCCGGACGGCCACGGTTCCCCGctt > 1:2150945‑M1/32‑101 (MQ=255) aaaatctccccgcgactaatgcgcagagaaaAGAGAAAGATAGTGCCAGGCTTCAGTTTCAACCACCAGCCCCACCGCCGGACGGCCACGGTTCCCCGctt < 2:3067630‑M1/70‑1 (MQ=255) aaaatctccccgcgactaatgcgcagagaaaAGAGAAAGATAGTGCCAGGCTTCAGTTTCAACCACCAGCCCCACCGCCGGACGGCCACGGTTCCCCGctt > 1:907954‑M1/32‑101 (MQ=255) aaatctccccgcgactaatgcgcagagaaaAGAGAAAGATAGTGCCAGGCTTCAGTTTCAACCACCAGCCCCACCGCCGGACGGCCACGGTTCCCCGcttc > 1:597542‑M1/31‑101 (MQ=255) aatctccccgcgactaatgcgcagagaaaAGAGAAAGATAGTGCCAGGCTTCAGTTTCAACCACCAGCCCCACCGCCGGACGGCCACGGTTCCCCGcttct < 1:461608‑M1/72‑1 (MQ=255) ctccccgcgactaatgcgcagagaaaAGAGAAAGATAGTGCCAGGCTTCAGTTTCAACCACCAGCCCCACCGCCGGACGGCCACGGTTCCCCGCTTCTTTg > 2:3753853‑M1/27‑101 (MQ=255) tccccgcgactaatgcgcagagaaaAGAGAAAGATAGTGCCAGGCTTCAGTTTCAACCACCAGCCCCACCGCCGGACGGCCACGGTTCCCCGCTTCTTTGa > 1:1749223‑M1/26‑101 (MQ=255) ccccgcgactaatgcgcagagaaaAGAGAAAGATAGTGCCAGGCTTCAGTTTCAACCACCAGCCCCACCGCCGGACGGCCACGGTTCCCCGCTTCTTTGAt < 2:1866941‑M1/77‑1 (MQ=255) ccccgcgactaatgcgcagagaaaAAAGAAAGATAGTGCCAGGCTTCAGTTTCAACCACCAGCCCCACCGCCGGACGGCCACGGTTCCCCGCTTCTTTGAt > 2:613611‑M1/25‑101 (MQ=255) tctcCCCGCGACTAATGCGCAGAGAAAGATAGTGCCAGGCTTCAGTTTCAACCACCAGCCCCACCGCCGGACGGCCACGGTTCCCCGCTTCTTTGATTTcc < 1:1257269/101‑1 (MQ=255) cgactaatgcgcagagaaaAGAGAAAGATAGTGCCAGGCTTCAGTTTCAACCACCAGCCCCACCGCCGGACGGCCACGGTTCCCCGCTTCTTTGATTTCCa < 1:3099539‑M1/82‑1 (MQ=255) cgactaatgcgcagagaaaAGAGAAAGATAGTGCCAGGCTTCAGTTTCAACCACCAGCCCCACCGCCGGACGGCCACGGTTCCCCGCTTCTTTGATTTCCa > 1:237238‑M1/20‑101 (MQ=255) gactaatgcgcagagaaaAGAGAAAGATAGTGCCAGGCTTCAGTTTCAACCACCAGCCCCACCGCCGGACGGCCACGGTTCCCCGCTTCTTTGATTTCCAg > 1:2275309‑M1/19‑101 (MQ=255) gactaatgcgcagagaaaAGAGAAAGATAGTGCCAGGCTTCAGTTTCAACCACCAGCCCCACCGCCGGACGGCCACGGTTCCCCGCTTCTTTGATTTCCAg < 1:180343‑M1/83‑1 (MQ=255) gactaatgcgcagagaaaAGAGAAAGATAGTGCCAGGCTTCAGTTTCAACCACCAGCCCCACCGCCGGACGGCCACGGTTCCCCGCTTCTTTGATTTCCAg > 1:789284‑M1/19‑101 (MQ=255) actaatgcgcagagaaaAGAGAAAGATAGTGCCAGGCTTCAGTTTCAACCACCAGCCCCACCGCCGGACGGCCACGGTTCCCCGCTTCTTTGATTTCCAGc > 1:1602836‑M1/18‑101 (MQ=255) ctaatgcgcagagaaaAGAGAAAGATAGTGCCAGGCTTCAGTTTCAACCACCAGCCCCACCGCCGGACGGCCACGGTTCCCCGCTTCTTTGATTTCCAGct < 2:2154165‑M1/85‑1 (MQ=255) taatgcgcagagaaaAGAGAAAGATAGTGCCAGGCTTCAGTTTCAACCACCAGCCCCACCGCCGGACGGCCACGGTTCCCCGCTTCTTTGATTTCCAGctc < 2:348317‑M1/86‑1 (MQ=255) taatgcgcagagaaaAGAGAAAGATAGTGCCAGGCTTCAGTTTCAACCACCAGCCCCACCGCCGGACGGCCACGGTTCCCCGCTTCTTTGATTTCCAGctc > 2:2647377‑M1/16‑101 (MQ=255) gcgcagagaaaAGAGAAAGATAGTGCCAGGCTTCAGTTTCAACCACCAGCCCCACCGCCGGACGGCCACGGTTCCCCGCTTCTTTGATTTCCAGCTCTTGc > 1:3360667‑M1/12‑101 (MQ=255) cgcagagaaaAGAGAAAGATAGTGCCAGGCTTCAGTTTCAACCACCAGCCCCACCGCCGGACGGCCACGGCTCCCCGCTTCTTTGATTTCCAGCTCTAGCa < 2:1733686‑M1/91‑1 (MQ=255) gcagagaaaAGAGAAAGATAGTGCCAGGCTTCAGTTTCAACCACCAGCCCCACCGCCGGACGGCCACGGTTCCCCGCTTCTTTGATTTCCAGCTCTTGCAc < 1:1374791‑M1/92‑1 (MQ=255) cagagaaaAGAGAAAGATAGTGCCAGGCTTCAGTTTCAACCACCAGCCCCACCGCCGGACGGCCACGGTTCCCCGCTTCTTTGATTTCCAGCTCTTGCAcc < 2:3470864‑M1/93‑1 (MQ=255) cagagaaaAGAGAAAGATAGTGCCAGGCTTCAGTTTCAACCACCAGCCCCACCGCCGGACGGCCACGGTTCCCCGCTTCTTTGATTTCCAGCTCTTGCAcc < 2:3386721‑M1/93‑1 (MQ=255) agagaaaAGAGAAAGATAGTGCCAGGCTTCAGTTTCAACCACCAGCCCCACCGCCGGACGGCCACGGTTCCCCGCTTCTTTGATTTCCAGCTCTTGCACCa > 2:3660839‑M1/8‑101 (MQ=255) agaaaAGAGAAAGATAGTGCCAGGCTTCAGTTTCAACCACCAGCCCCACCGCCGGACGGCCACGGTTCCCCGCTTCTTTGATTTCCAGCTCTTGCACCAgg < 1:3407793‑M1/96‑1 (MQ=255) agaaaAGAGAAAGATAGTGCCAGGCTTCAGTTTCAACCACCAGCCCCACCGCCGGACGGCCACGGTTCCCCGCTTCTTTGATTTCCAGCTCTTGCACCAgg < 1:1150176‑M1/96‑1 (MQ=255) agaaaAGAGAAAGATAGTGCCAGGCTTCAGTTTCAACCACCAGCCCCACCGCCGGACGGCCACGGTTCCCCGCTTCTTTGATTTCCAGCTCTTGCACCAgg > 1:2316662‑M1/6‑101 (MQ=255) aaAGAGAAAGATAGTGCCAGGCTTCAGTTTCAACCACCAGCCCCACCGCCGGACGGCCACGGTTCCCCGCTTCTTTGATTTCCAGCTCTTGCACCAGgtgt < 2:3696538‑M1/99‑1 (MQ=255) | TGGCAAGTCATCTTTTAACGCCAGTTCCTGCGACTCTTCCACCACCAGTTTGCTGCTCAGATCGCGCAGAGCAAGGAAAATCTCCCCGCGACTAATGCGCAGAGAAAGATAGTGCCAGGCTTCAGTTTCAACCACCAGCCCCACCGCCGGACGGCCACGGTTCCCCGCTTCTTTGATTTCCAGCTCTTGCACCAGGTGTGC > CP009273/1662453‑1662653 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |