| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 1662553 = | 7 (0.040) | 190 (1.150) | 118/200 | 0.1 | 96.5% | coding (269/1221 nt) | mlc | glucosamine anaerobic growth regulon transcriptional repressor; autorepressor |
| ? | CP009273 | = 1662559 | NA (NA) | coding (263/1221 nt) | mlc | glucosamine anaerobic growth regulon transcriptional repressor; autorepressor | |||||
Only 100 of 192 total aligned reads displayed.
GTCATCTTTTAACGCCAGTTCCTGCGACTCTTCCACCACCAGTTTGCTGCTCAGATCGCGCAGAGCAAGGAAAATCTCCCCGCGACTAATGCGCAGAGAAAGATAGTGCCAGGCTTCAGTTTCAACCACCAGCCCCACCGCCGGACGGCCACGGTTCCCCGCTTCTTTGATTTCCAGCTCTTGCACCAGGTGTGCTTCGAG > CP009273/1662459‑1662659 | tttaacgccagttcctgcgactcttccaccaccagtttgctgctcagatcgcgcagagcaaggaaaatctccccgcgactaatgcgcagagaaaagagaaa > 1:2045311‑M1/95‑101 (MQ=255) taacgccagttcctgcgactcttccaccaccagtttgctgctcagatcgcgcagagcaaggaaaatctccccgcgactaatgcgcagagaaaAGAGAAAGa > 2:26580‑M1/93‑101 (MQ=255) aacgcccgttcctgcgactcttccaccaccagtttgctgctcagatcgcgcagagcaaggaaaatctccccgcgactaatgcgcagagaaaAGAGAAAGAt > 1:667151‑M1/92‑101 (MQ=255) aacgccagttcctgcgactcttccaccaccagtttgctgctcagatcgcgcagagcaaggaaaatctccccgcgactaatgcgcagagaaaAGAGAAAGAt > 2:2287884‑M1/92‑101 (MQ=255) aacgccagttcctgcgactcttccaccaccagtttgctgctcagatcgcgcagagcaaggaaaatctccccgcgactaatgcgcagagaaaAGAGAAAGAt < 2:1911745‑M1/10‑1 (MQ=255) gccagttcctgcgactcttccaccaccagtttgctgctcagatcgcgcagagcaaggaaaatctccccgcgactaatgcgcagagaaaAGAGAAAGATAGt < 1:3363918‑M1/13‑1 (MQ=255) gccagttcctgcgactcttccaccaccagtttgctgctcagatcgcgcagagcaaggaaaatctccccgcgactaatgcgcagagaaaAGAGAAAGATAGt > 2:2374271‑M1/89‑101 (MQ=255) cagttcctgcgactcttccaccaccagtttgctgctcagatcgcgcagagcaaggaaaatctccccgcgactaatgcgcagagaaaAGAGAAAGATAGTGc > 2:3806521‑M1/87‑101 (MQ=255) agttcctgcgactcttccaccaccagtttgctgctcagatcgcgcagagcaaggaaaatctccccgcgactaatgcgcagagaaaAGAGAAAGATAGTGcc < 2:1023576‑M1/16‑1 (MQ=255) gttcctgcgactcttccaccaccagtttgctgctcagatcgcgcagagcaaggaaaatctccccgcgactaatgcgcagagaaaAGAGAAAGATAGTGCCa > 2:3422710‑M1/85‑101 (MQ=255) gttcctgcgactcttccaccaccagtttgctgctcagatcgcgcagagcaaggaaaatctccccgcgactaatgcgcagagaaaAGAGAAAGATAGTGCCa < 1:2482614‑M1/17‑1 (MQ=255) cctgcgactcttccaccaccagtttgctgctcagatcgcgcagagcaaggaaaatctccccgcgactaatgcgcagagaaaAGAGAAAGATAGTGCCAGGc < 2:1092‑M1/20‑1 (MQ=255) ctgcgactcttccaccaccagtttgctgctcagatcgcgcagagcaaggaaaatctccccgcgactaatgcgcagagaaaAGAGAAAGATAGTGCCAGGCt < 1:117239‑M1/21‑1 (MQ=255) tgcgactcttccaccaccagtttgctgctcagatcgcgcagagcaaggaaaatctccccgcgactaatgcgcagagaaaAGAGAAAGATAGTGCCAGGCtt > 1:3093831‑M1/80‑101 (MQ=255) cgactcttccaccaccagtttgctgctcagatcgcgcagagcaaggaaaatctccccgcgactaatgcgcagagaaaAGAGAAAGATAGTGCCAGGCTTCa < 1:2016353‑M1/24‑1 (MQ=255) gactcttccaccaccagtttgctgctcagctggcgcagagcaaggaaaatctccccgcgactaatgcgcagagaaaAGAGAAAGATAGTGCCAGGCTTCAg < 2:1253114‑M1/25‑1 (MQ=255) actcttccaccaccagtttgctgctcagatcgcgcagagcaaggaaaatctccccgcgactaatgcgcagagaaaAGAGAAAGATAGTGCCAGGCTTCAGt < 1:1012533‑M1/26‑1 (MQ=255) ctcttccaccaccagtttgctgctcagatcgcgcagagcaaggaaaatctccccgcgactaatgcgcagagaaaAGAGAAAGATAGTGCCAGGCTTCAGtt < 2:1567567‑M1/27‑1 (MQ=255) ctcttccaccaccagtttgctgctcagatcgcgcagagcaaggaaaatctccccgcgactaatgcgcagagaaaAGAGAAAGATAGTGCCAGGCTTCAGtt > 1:579145‑M1/75‑101 (MQ=255) ctcttccaccaccagtttgctgctcagatcgcgcagagcaaggaaaatctccccgcgactaatgcgcagagaaaAGAGAAAGATAGTGCCAGGCTTCAGtt < 1:2647377‑M1/27‑1 (MQ=255) tcttccaccaccagtttgctgctcagatcgcgcagagcaaggaaaatctccccgcgactaatgcgcagagaaaAGAGAAAGATAGTGCCAGGCTTCAGttt < 2:2792334‑M1/28‑1 (MQ=255) cttccaccaccagtttgctgctcagatcgcgcagagcaaggaaaatctccccgcgactaatgcgcagagaaaAGAGAAAGATAGTGCCAGGCTTCAGTTTc < 2:214397‑M1/29‑1 (MQ=255) ttccaccaccagtttgctgctcagatcgcgcagagcaaggaaaatctccccgcgactaatgcgcagagaaaAGAGAAAGATAGTGCCAGGCTTCAGTTTCa > 2:994584‑M1/72‑101 (MQ=255) caccaccagtttgctgctcagatcgcgcagagcaaggaaaatctccccgcgactaatgcgcagagaaaAGAGAAAGATAGTGCCAGGCTTCAGTTTCAacc < 1:713011‑M1/33‑1 (MQ=255) accagtttgctgctcagatcgcgcagagcaaggaaaatctccccgcgactaatgcgcagagaaaAGAGAAAGATAGTGCCAGGCTTCAGTTTCAAccacca > 2:2158479‑M1/65‑101 (MQ=255) cagtttgctgctcagatcgcgcagagcaaggaaaatctccccgcgactaatgcgcagagaaaAGAGAAAGATAGTGCCAGGCTTCAGTTTCAACCACCAGc < 1:2901348‑M1/39‑1 (MQ=255) agtttgctgctcagatcgcgcagagcaaggaaaatctccccgcgactaatgcgcagagaaaAGAGAAAGATAGTGCCAGGCTTCAGTTTCAACCACCAGcc < 2:1857116‑M1/40‑1 (MQ=255) tttgctgctcagatcgcgcagagcaaggaaaatctccccgcgactaatgcgcagagaaaAGAGAAAGATAGTGCCAGGCTTCAGTTTCAACCACCAGcccc < 1:2813779‑M1/42‑1 (MQ=255) ttgctgctcagatcgcgcagagcaaggaaaatctccccgcgactaatgcgcagagaaaAGAGAAAGATAGTGCCAGGCTTCAGTTTCAACCACCAGCCCCa > 1:2181935‑M1/59‑101 (MQ=255) tgctgctcagatcgcgcagagcaaggaaaatctccccgcgactaatgcgcagagaaaAGAGAAAGATAGTGCCAGGCTTCAGTTTCAACCACCAGCCCCAc > 2:2858829‑M1/58‑101 (MQ=255) ctgctcagatcgcgcagagcaaggaaaatctccccgcgactaatgcgcagagaaaAGAGAAAGATAGTGCCAGGCTTCAGTTTCAACCACCAGCCCCAccg > 2:1508113‑M1/56‑101 (MQ=255) tgctcagatcgcgcagagcaaggaaaatctccccgcgactaatgcgcagagaaaAGAGAAAGATAGTGCCAGGCTTCAGTTTCAACCACCAGCCCCAccgc > 1:1838175‑M1/55‑101 (MQ=255) tcagatcgcgcagagcaaggaaaatctccccgcgactaatgcgcagagaaaAGAGAAAGATAGTGCCAGGCTTCAGTTTCAACCACCAGCCCCACCGCCgg > 1:3686383‑M1/52‑101 (MQ=255) cagatcgcgcagagcaaggaaaatctccccgcgactaatgcgcagagaaaAGAGAAAGATAGTGCCAGGCTTCAGTTTCAACCACCAGCCCCACCGCCGGa < 2:1480881‑M1/51‑1 (MQ=255) agatcgcgcagagcaaggaaaatctccccgcgactaatgcgcagagaaaAGAGAAAGATAGTGCCAGGCTTCAGTTTCAACCACCAGCCCCACCGCCGGAc > 1:1895411‑M1/50‑101 (MQ=255) agatcgcgcagagcaaggaaaatctccccgcgactaatgcgcagagaaaAGAGAAAGATAGTGCCAGGCTTCAGTTTCAACCACCAGCCCCACCGCCGGAc > 2:908455‑M1/50‑101 (MQ=255) gatcgcgcagagcaaggaaaatctccccgcgactaatgcgcagagaaaAGAGAAAGATAGTGCCAGGCTTCAGTTTCAACCACCAGCCCCACCGCCGGACg < 2:3064895‑M1/53‑1 (MQ=255) gatcgcgcagagcaaggaaaatctccccgcgactaatgcgcagagaaaAGAGAAAGATAGTGCCAGGCTTCAGTTTCAACCACCAGCCCCACCGCCGGACg < 1:3439323‑M1/53‑1 (MQ=255) gatcgcgcagagcaaggaaaatctccccgcgactaatgcgcagagaaaAGAGAAAGATAGTGCCAGGCTTCAGTTTCAACCACCAGCCCCACCGCCGGACg > 2:95480‑M1/49‑101 (MQ=255) atcgcgcagagcaaggaaaatctccccgcgactaatgcgcagagaaaAGAGAAAGATAGTGCCAGGCTTCAGTTTCAACCACCAGCCCCACCGCCGGACgg < 2:1951931‑M1/54‑1 (MQ=255) cgcagagcaaggaaaatctccccgcggctaatgcgcagagaaaAGAGAAAGATAGTGCCAGGCTTCAGTTTCAACCACCAGCCCCACCGCCGGACGGCCAc > 2:2479696‑M1/44‑101 (MQ=255) gcagagcaaggaaaatctccccgcgactaatgcgcagagaaaAGAGAAAGATAGTGCCAGGCTTCAGTTTCAACCACCAGCCCCACCGCCGGACGGCCACg < 1:110677‑M1/59‑1 (MQ=255) gcagagcaaggaaaatctccccgcgactaatgcgcagagaaaAGAGAAAGATAGTGCCAGGCTTCAGTTTCAACCACCAGCCCCACCGCCGGACGGCCACg > 1:2915458‑M1/43‑101 (MQ=255) cagagcaaggaaaatctccccgcgactaatgcgcagagaaaAGAGAAAGATAGTGCCAGGCTTCAGTTTCAACCACCAGCCCCACCGCCGGACGGCCACgg < 1:802867‑M1/60‑1 (MQ=255) cagagcaaggaaaatctccccgcgactaatgcgcagagaaaAGAGAAAGATAGTGCCAGGCTTCAGTTTCAACCACCAGCCCCACCGCCGGACGGCCACgg > 2:961121‑M1/42‑101 (MQ=255) cagagcaaggaaaatctccccgcgactaatgcgcagagaaaAGAGAAAGATAGTGCCAGGCTTCAGTTTCAACCACCAGCCCCACCGCCGGACGGCCACgg > 1:1293584‑M1/42‑101 (MQ=255) cagagcaaggaaaatctccccgcgactaatgcgcagagaaaAGAGAAAGATAGTGCCAGGCTTCAGTTTCAACCACCAGCCCCACCGCCGGACGGCCACgg < 1:267112‑M1/60‑1 (MQ=255) agagcaaggaaaatctccccgcgactaatgcgcagagaaaAGAGAAAGATAGTGCCAGGCTTCAGTTTCAACCACCAGCCCCACCGCCGGACGGCCACGGt < 1:3653154‑M1/61‑1 (MQ=255) agcaaggaaaatctccccgcgactaatgcgcagagaaaAGAGAAAGATAGTGCCAGGCTTCAGTTTCAACCACCAGCCCCACCGCCGGACGGCCACGGTTc > 1:2980638‑M1/39‑101 (MQ=255) gcaaggaaaatctccccgcgactaatgcgcagagaaaAGAGAAAGATAGTGCCAGGCTTCAGTTTCAACCACCAGCCCCACCGCCGGACGGCCACGGTTcc > 2:3001111‑M1/38‑101 (MQ=255) aaggaaaatctccccgcgactaatgcgcagagaaaAGAGAAAGATAGTGCCAGGCTTCAGTTTCAACCACCAGCCCCACCGCCGGACGGCCACGGTTcccc < 2:119759‑M1/66‑1 (MQ=255) gaaaatctccccgcgactaatgcgcagagaaaAGAGAAAGATAGTGCCAGGCTTCAGTTTCAACCACCAGCCCCACCGCCGGACGGCCACGGTTCCCCGct > 2:2121239‑M1/33‑101 (MQ=255) aaaatctccccgcgactaatgcgcagagaaaAGAGAAAGATAGTGTCAGGCTTCAGTTTCAACCGCCAGCCCCACCGCCGGACGGCCACGGTTCCCCGctt > 1:2150945‑M1/32‑101 (MQ=255) aatctccccgcgactaatgcgcagagaaaAGAGAAAGATAGTGCCAGGCTTCAGTTTCAACCACCAGCCCCACCGCCGGACGGCCACGGTTCCCCGcttct < 1:461608‑M1/72‑1 (MQ=255) tctccccgcgactaatgcgcagagaaaAGAGAAAGATAGTGCCAGGCTTCAGTTTCAACCACCAGCCCCACCGCCGGACGGCCACGGTTCCCCGCTTCttt > 2:2618783‑M1/28‑101 (MQ=255) ctccccgcgactaatgcgcagagaaaAGAGAAAGATAGTGCCAGGCTTCAGTTTCAACCACCAGCCCCACCGCCGGACGGCCACGGTTCCCCGCTTCTTTg > 2:3753853‑M1/27‑101 (MQ=255) tccccgcgactaatgcgcagagaaaAGAGAAAGATAGTGCCAGGCTTCAGTTTCAACCACCAGCCCCACCGCCGGACGGCCACGGTTCCCCGCTTCTTTGa < 1:3265966‑M1/76‑1 (MQ=255) tccccgcgactaatgcgcagagaaaAGAGAAAGATAGTGCCAGGCTTCAGTTTCAACCACCAGCCCCACCGCCGGACGGCCACGGTTCCCCGCTTCTTTGa > 1:1749223‑M1/26‑101 (MQ=255) tccccgcgactaatgcgcagagaaaAGAGAAAGATAGTGCCAGGCTTCAGTTTCAACCACCAGCCCCACCGCCGGACGGCCACGGTTCCCCGCTTCTTTGa < 1:3131790‑M1/76‑1 (MQ=255) ccccgcgactaatgcgcagagaaaAGAGAAAGATAGTGCCAGGCTTCAGTTTCAACCACCAGCCCCACCGCCGGACGGCCACGGTTCCCCGCTTCTTTGAt < 2:1866941‑M1/77‑1 (MQ=255) ccccgcgactaatgcgcagagaaaAGAGAAAGATAGTGCCAGGCTTCAGTTTCAACCACCAGCCCCACCGCCGGACGGCCACGGTTCCCCGCTTCTTTGAt < 2:238839‑M1/77‑1 (MQ=255) ccccgcgactaatgcgcagagaaaAGAGAAAGATAGTGCCAGGCTTCAGTTTCAACCACCAGCCCCACCGCCGGACGGCCACGGTTCCCCGCTTCTTTGAt > 1:590170‑M1/25‑101 (MQ=255) ccccgcgactaatgcgcagagaaaAAAGAAAGATAGTGCCAGGCTTCAGTTTCAACCACCAGCCCCACCGCCGGACGGCCACGGTTCCCCGCTTCTTTGAt > 2:613611‑M1/25‑101 (MQ=255) ccgcgactaatgcgcagagaaaAGAGAAAGATAGTGCCAGGCTTCAGTTTCAACCACCAGCCCCACCGCCGGACGGCCACGGTTCCCCGCTTCTTTGAttt > 2:2847616‑M1/23‑101 (MQ=255) ccgcgactaatgcgcagagaaaAGAGAAAGATAGTGCCAGGCTTCAGTTTCAACCACCAGCCCCACCGCCGGACGGCCACGGTTCCCCGCTTCTTTGAttt > 2:3883048‑M1/23‑101 (MQ=255) tctcCCCGCGACTAATGCGCAGAGAAAGATAGTGCCAGGCTTCAGTTTCAACCACCAGCCCCACCGCCGGACGGCCACGGTTCCCCGCTTCTTTGATTTcc < 1:1257269/101‑1 (MQ=255) cgactaatgcgcagagaaaAGAGAAAGATAGTGCCAGGCTTCAGTTTCAACCACCAGCCCCACCGCCGGACGGCCACGGTTCCCCGCTTCTTTGATTTCCa > 2:53105‑M1/20‑101 (MQ=255) cgactaatgcgcagagaaaAGAGAAAGATAGTGCCAGGCTTCAGTTTCAACCACCAGCCCCACCGCCGGACGGCCACGGTTCCCCGCTTCTTTGATTTCCa > 2:110677‑M1/20‑101 (MQ=255) gactaatgcgcagagaaaAGAGAAAGATAGTGCCAGGCTTCAGTTTCAACCACCAGCCCCACCGCCGGACGGCCACGGTTCCCCGCTTCTTTGATTTCCAg < 1:180343‑M1/83‑1 (MQ=255) gactaatgcgcagagaaaAGAGAAAGATAGTGCCAGGCTTCAGTTTCAACCACCAGCCCCACCGCCGGACGGCCACGGTTCCCCGCTTCTTTGATTTCCAg > 1:2275309‑M1/19‑101 (MQ=255) actaatgcgcagagaaaAGAGAAAGATAGTGCCAGGCTTCAGTTTCAACCACCAGCCCCACCGCCGGACGGCCACGGTTCCCCGCTTCTTTGATTTCCAGc < 2:852612‑M1/84‑1 (MQ=255) actaatgcgcagagaaaAGAGAAAGATAGTGCCAGGCTTCAGTTTCAACCACCAGCCCCACCGCCGGACGGCCACGGTTCCCCGCTTCTTTGATTTCCAGc > 1:1602836‑M1/18‑101 (MQ=255) ctaatgcgcagagaaaAGAGAAAGATAGTGCCAGGCTTCAGTTTCAACCACCAGCCCCACCGCCGGACGGCCACGGTTCCCCGCTTCTTTGATTTCCAGct < 2:2154165‑M1/85‑1 (MQ=255) taatgcgcagagaaaAGAGAAAGATAGTGCCAGGCTTCAGTTTCAACCACCAGCCCCACCGCCGGACGGCCACGGTTCCCCGCTTCTTTGATTTCCAGctc > 2:2647377‑M1/16‑101 (MQ=255) taatgcgcagagaaaAGAGAAAGATAGTGCCAGGCTTCAGTTTCAACCACCAGCCCCACCGCCGGACGGCCACGGTTCCCCGCTTCTTTGATTTCCAGctc < 2:348317‑M1/86‑1 (MQ=255) atgcgcagagaaaAGAGAAAGATAGTGCCAGGCTTCAGTTTCAACCACCAGCCCCACCGCCGGACGGCCACGGTTCCCCGCTTCTTTGATTTCCAGCTCtt > 1:3219986‑M1/14‑101 (MQ=255) atgcgcagagaaaAGAGAAAGATAGTGCCAGGCTTCAGTTTCAACCACCAGCCCCACCGCCGGACGGCCACGGTTCCCCGCTTCTTTGATTTCCAGCTCtt < 2:3813161‑M1/88‑1 (MQ=255) atgcgcagagaaaAGAGAAAGATAGTGCCAGGCTTCAGTTTCAACCACCAGCCCCACCGCCGGACGGCCACGGTTCCCCGCTTCTTTGATTTCCAGCTCtt > 1:2117176‑M1/14‑101 (MQ=255) gcagagaaaAGAGAAAGATAGTGCCAGGCTTCAGTTTCAACCACCAGCCCCACCGCCGGACGGCCACGGTTCCCCGCTTCTTTGATTTCCAGCTCTTGCAc < 1:1374791‑M1/92‑1 (MQ=255) cagagaaaAGAGAAAGATAGTGCCAGGCTTCAGTTTCAACCACCAGCCCCACCGCCGGACGGCCACGGTTCCCCGCTTCTTTGATTTCCAGCTCTTGCAcc < 2:3386721‑M1/93‑1 (MQ=255) cagagaaaAGAGAAAGATAGTGCCAGGCTTCAGTTTCAACCACCAGCCCCACCGCCGGACGGCCACGGTTCCCCGCTTCTTTGATTTCCAGCTCTTGCAcc < 2:17323‑M1/93‑1 (MQ=255) cagagaaaAGAGAAAGATAGTGCCAGGCTTCAGTTTCAACCACCAGCCCCACCGCCGGACGGCCACGGTTCCCCGCTTCTTTGATTTCCAGCTCTTGCAcc < 2:3470864‑M1/93‑1 (MQ=255) agagaaaAGAGAAAGATAGTGCCAGGCTTCAGTTTCAACCACCAGCCCCACCGCCGGACGGCCACGGTTCCCCGCTTCTTTGATTTCCAGCTCTTGCACCa > 1:3913719‑M1/8‑101 (MQ=255) agagaaaAGAGAAAGATAGTGCCAGGCTTCAGTTTCAACCACCAGCCCCACCGCCGGACGGCCACGGTTCCCCGCTTCTTTGATTTCCAGCTCTTGCACCa > 2:3660839‑M1/8‑101 (MQ=255) agaaaAGAGAAAGATAGTGCCAGGCTTCAGTTTCAACCACCAGCCCCACCGCCGGACGGCCACGGTTCCCCGCTTCTTTGATTTCCAGCTCTTGCACCAgg > 2:3956593‑M1/6‑101 (MQ=255) agaaaAGAGAAAGATAGTGCCAGGCTTCAGTTTCAACCACCAGCCCCACCGCCGGACGGCCACGGTTCCCCGCTTCTTTGATTTCCAGCTCTTGCACCAgg > 1:2316662‑M1/6‑101 (MQ=255) agaaaAGAGAAAGATAGTGCCAGGCTTCAGTTTCAACCACCAGCCCCACCGCCGGACGGCCACGGTTCCCCGCTTCTTTGATTTCCAGCTCTTGCACCAgg > 1:974844‑M1/6‑101 (MQ=255) aaaAGAGAAAGATAGTGCCAGGCTTCAGTTTCAACCACCAGCCCCACCGCCGGACGGCCACGGTTCCCCGCTTCTTTGATTTCCAGCTCTTGCACCAGgtg > 2:2813779‑M1/4‑101 (MQ=255) aaaAGAGAAAGATAGTGCCAGGCTTCAGTTTCAACCACCAGCCCCACCGCCGGACGGCCACGGTTCCCCGCTTCTTTGATTTCCAGCTCTTGCACCAGgtg > 2:2397111‑M1/4‑101 (MQ=255) aaaAGAGAAAGATAGTGCCAGGCTTCAGTTTCAACCACCAGCCCCACCGCCGGACGGCCACGGTTCCCCGCTTCTTTGATTTCCAGCTCTTGCACCAGgtg > 1:3507119‑M1/4‑101 (MQ=255) aaaAGAGAAAGATAGTGCCAGGCTTCAGTTTCAACCACCAGCCCCACCGCCGGACGGCCACGGTTCCCCGCTTCTTTGATTTCCAGCTCTTGCACCAGgtg < 2:742976‑M1/98‑1 (MQ=255) aaAGAGAAAGATAGTGCCAGGCTTCAGTTTCAACCACCAGCCCCACCGCCGGACGGCCACGGTTCCCCGCTTCTTTGATTTCCAGCTCTTGCACCAGgtgt < 2:3696538‑M1/99‑1 (MQ=255) aaAGAGAAAGATAGTGCCAGGCTTCAGTTTCAACCACCAGCCCCACCGCCGGACGGCCACGGTTCCCCGCTTCTTTGATTTCCAGCTCTTGCACCAGgtgt < 1:856437‑M1/99‑1 (MQ=255) agagAAAGATAGTGCCAGGCTTCAGTTTCAACCACCAGCCCCACCGCCGGACGGCCACGGTTCCCCGCTTCTTTGATTTCCAGCTCTTGCACCAGGTGTGc > 2:2262813/1‑101 (MQ=255) agaAAGATAGTGCCAGGCTTCAGTTTCAACCACCAGCCCCACCGCCGGACGGCCACGGTTCCCCGCTTCTTTGATTTCCAGCTCTTGCACCAGGTGTGCtt > 1:2022432/1‑101 (MQ=255) agaAAGATAGTGCCAGGCTTCAGTTTCAACCACCAGCCCCACCGCCGGACGGCCACGGTTCCCCGCTTCTTTGATTTCCAGCTCTTGCACCAGGTGTGCtt > 1:60810/1‑101 (MQ=255) gaAAGATAGTGCCAGGCTTCAGTTTCAACCACCAGCCCCACCGCCGGACGGCCACGGTTCCCCGCTTCTTTGATTTCCAGCTCTTGCACCAGGTGTGCTTc > 1:774557/1‑101 (MQ=255) aaGATAGTGCCAGGCTTCAGTTTCAACCACCAGCCCCACCGCCGGACGGCCACGGTTCCCCGCTTCTTTGATTTCCAGCTCTTGCACCAGGTGTGCTTCGa > 2:3150276/1‑101 (MQ=255) aaGATAGTGCCAGGCTTCAGTTTCAACCACCAGCCCCACCGCCGGACGGCCACGGTTCCCCGCTTCTTTGATTTCCAGCTCTTGCACCAGGTGTGCTTCGa > 2:1765080/1‑101 (MQ=255) aGATAGTGCCAGGCTTCAGTTTCAACCACCAGCCCCACCGCCGGACGGCCACGGTTCCCCGCTTCTTTGATTTCCAGCTCTTGCACCAGGTGTGCTTCGAg > 2:659789/1‑101 (MQ=255) | GTCATCTTTTAACGCCAGTTCCTGCGACTCTTCCACCACCAGTTTGCTGCTCAGATCGCGCAGAGCAAGGAAAATCTCCCCGCGACTAATGCGCAGAGAAAGATAGTGCCAGGCTTCAGTTTCAACCACCAGCCCCACCGCCGGACGGCCACGGTTCCCCGCTTCTTTGATTTCCAGCTCTTGCACCAGGTGTGCTTCGAG > CP009273/1662459‑1662659 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |