| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 3728756 = | 83 (0.500) | 177 (1.070) | 116/200 | 0.1 | 71.4% | coding (418/1179 nt) | xylR | xylose divergent operon transcriptional activator |
| ? | CP009273 | = 3728788 | 59 (0.360) | coding (450/1179 nt) | xylR | xylose divergent operon transcriptional activator | |||||
Only 100 of 385 total aligned reads displayed.
GGTTGAAAGCGCATTTTTGCATTTAAAAGAGAAAGGCGTTAACCGCTTTGCTTTTTATGGTCTTCCGGAATCAAGCGGCAAACGTTGGGCCACTGAGCGCGAATATGCATTTCGTCAGCTTGTCGCCGAAGAAAAGTATCGCGGAGTGGTTTATCAGGGGTTAGAAACCGCGCCAGAGAACTGGCAACACGCGCAAAATCG > CP009273/3728656‑3728856 | aggcgttaaccgctttgctttttatggtcttccggaatcaagcggcaaacgttgggccactgagcgcgaatatgcatttcgtcagcttgtcgccgaagaag < 1:2711653‑M1/1‑1 (MQ=255) tGAAAGCGCATTTTTGCATTTAAAAGAGAAAGGCGTTAACCGCTTTGCTTTTTATGGTCTTCCGGAATCAAGCGGCAAACGTTGGGCCACTGAGCGCGAat < 1:3492844/101‑1 (MQ=255) cgttaaccgctttgctttttatggtcttccggaatcaagcggcaaacgttgggccactgagcgcgaatatgcatttcgtcagcttgtcgccgaagaaGAat < 2:541347‑M1/4‑1 (MQ=255) gttaaccgctttgctttttatggtcttccggaatcaagcggcaaacgttgggccactgagcgcgaatatgcatttcgtcagcttgtcgccgaagaaGAata > 1:837510‑M1/97‑101 (MQ=255) ttaaccgctttgctttttatggtcttccggaatcaagcggcaaacgttgggccactgagcgcgaatatgcatttcgtcagcttgtcgccgaagaaGAatat > 2:3411609‑M1/96‑101 (MQ=255) aaaGCGCATTTTTGCATTTAAAAGAGAAAGGCGTTAACCGCTTTGCTTTTTATGGTCTTCCGGAATCAAGCGGCAAACGTTGGGCCACTGAGCGCGAatat > 1:2993195/1‑101 (MQ=255) aaaGCGCATTTTTGCATTTAAAAGAGAAAGGCGTTAACCGCTTTGCTTTTTATGGTCTTCCGGAATCAAGCGGCAAACGTTGGGCCACTGAGCGCGAatat > 1:3286319/1‑101 (MQ=255) aaaGCGCATTTTTGCATTTAAAAGAGAAAGGCGTTAACCGCTTTGCTTTTTATGGTCTTCCGGAATCAAGCGGCAAACGTTGGGCCACTGAGCGCGAatat < 1:3938662/101‑1 (MQ=255) taaccgctttgctttttatggtcttccggaatcaagcggcaaacgttgggccactgagcgcgaatatgcatttcgtcagcttgtcgccgaagaaGAATATg > 1:2572177‑M1/95‑101 (MQ=255) aaGCGCATTTTTGCATTTAAAAGAGAAAGGCGTTAACCGCTTTGCTTTTTATGGTCTTCCGGAATCAAGCGGCAAACGTTGGGCCACTGAGCGCGAATATg > 1:2910459/1‑101 (MQ=255) gcgcATTTTTGCATTTAAAAGAGAAAGGCGTTAACCGCTTTGCTTTTTATGGTCTTCCGGAATCAAGCGGCAAACGTTGGGCCACTGAGCGCGAATATGCa > 2:1886423/1‑101 (MQ=255) cgcATTTTTGCATTTAAAAGAGAAAGGCGTTAACCGCTTTGCTTTTTATGGTCTTCCGGAATCAAGCGGCAAACGTTGGGCCACTGAGTGCGAATATGCAt > 2:898945/1‑101 (MQ=255) cgcATTTTTGCATTTAAAAGAGAAAGGCGTTAACCGCTTTGCTTTTTATGGTCTTCCGGAATCAAGCGGCAAACGTTGGGCCACTGAGCGCGAATATGCAt > 2:354320/1‑101 (MQ=255) gctttgctttttatggtcttccggaatcaagcggcaaacgttgggccactgagcgcgaatatgcatttcgtcagcttgtcgccgaagaaGAATATGCAttt < 2:2052734‑M1/12‑1 (MQ=255) gctttgctttttatggtcttccggaatcaagcggcaaacgttgggccactgagcgcgaatatgcatttcgtcagcttgtcgccgaagaaGAATATGCAttt > 2:3506658‑M1/90‑101 (MQ=255) ctttgctttttatggtcttccggaatcaagcggcaaacgttgggccactgagcgcgaatatgcatttcgtcagcttgtcgccgaagaaGAATATGCATTTc < 2:2092599‑M1/13‑1 (MQ=255) aTTTTTGCATTTAAAAGAGAAAGGCGTTAACCGCTTTGCTTTTTATGGTCTTCCGGAATCAAGCGGCAAACGTTGGGCCACTGAGCGCGAATATGCATTTc > 1:1554731/1‑101 (MQ=255) tttttGCATTTAAAAGAGAAAGGCGTTAACCGCTTTGCTTTTTATGGTCTTCCGGAATCAAGCGGCAAACGTTGGGCCACTGAGCGCGAATATGCATTTCg > 2:2961541/1‑101 (MQ=255) tttGCATTTAAAAGAGAAAGGCGTTAACCGCTTTGCTTTTTATGGTCTTCCGGAATCAAGCGGCAAACGTTGGGCCACTGAGCGCGAATATGCATTTCGTc < 1:3142159/101‑1 (MQ=255) tgctttttatggtcttccggaatcaagcggcaaacgttgggccactgagcgcgaatatgcatttcgtcagcttgtcgccgaagaaGAATATGCATTTCGTc < 2:3085051‑M1/16‑1 (MQ=255) ttGCATTTAAAAGAGAAAGGCGTTAACCGCTTTGCTTTTTATGGTCTTCCGGAATCAAGCGGCAAACGTTGGGCCACTGAGCGCGAATATGCATTTCGTCa < 1:839471/101‑1 (MQ=255) tGCATTTAAAAGAGAAAGGCGTTAACCGCTTTGCTTTTTATGGTCTTCCGGAATCAAGCGGCAAACGTTGGGCCACTGAGCGCGAATATGCATTTCGTCAg > 1:2743665/1‑101 (MQ=255) cATTTAAAAGAGAAAGGCGTTAACCGCTTTGCTTTTTATGGTCTTCCGGAATCAAGCGGCAAACGTTGGGCCACTGAGCGCGAATATGCATTTCGTCAGCt > 1:1530217/1‑101 (MQ=255) aTTTAAAAGAGAAAGGCGTTAACCGCTTTGCTTTTTATGGTCTTCCGGAATCAAGCGGCAAACGTTGGGCCACTGAGCGCGAATATGCATTTCGTCAGCtt < 2:3434263/101‑1 (MQ=255) tttAAAAGAGAAAGGCGTTAACCGCTTTGCTTTTTATGGTCTTCCGGAATCAAGCGGCAAACGTTGGGCCACTGAGCGCGAATATGCATTTCGTCAGCTTg < 1:3735694/101‑1 (MQ=255) tttAAAAGAGAAAGGCGTTAACCGCTTTGCTTTTTATGGTCTTCCGGAATCAAGCGGCAAACGTTGGGCCACTGAGCGCGAATATGCATTTCGTCAGCTTg < 2:426655/101‑1 (MQ=255) tttAAAAGAGAAAGGCGTTAACCGCTTTGCTTTTTATGGTCTTCCGGAATCAAGCGGCAAACGTTGGGCCACTGAGCGCGAATATGCATTTCGTCAGCTTg < 1:1283257/101‑1 (MQ=255) ttAAAAGAGAAAGGCGTTAACCGCTTTGCTTTTTATGGTCTTCCGGAATCAAGCGGCAAACGTTGGGCCACTGAGCGCGAATATGCATTTCGTCAGCTTGt < 2:2574044/101‑1 (MQ=255) tatggtcttccggaatcaagcggcaaacgttgggccactgagcgcgaatatgcatttcgtcagcttgtcgccgaagaaGAATATGCATTTCGTCAGCTTGt < 1:224522‑M1/23‑1 (MQ=255) tAAAAGAGAAAGGCGTTAACCGCTTTGCTTTTTATGGTCTTCCGGAATCAAGCGGCAAACGTTGGGCCACTGAGCGCGAATATGCATTTCGTCAGCTTGTc > 2:1594161/1‑101 (MQ=255) aaaaGAGAAAGGCGTTAACCGCTTTGCTTTTTATGGTCTTCCGGAATCAAGCGGCAAACGTTGGGCCACTGAGCGCGAATATGCATTTCGTCAGCTTGTCg < 2:6590/101‑1 (MQ=255) ggtcttccggaatcaagcggcaaacgttgggccactgagcgcgaatatgcatttcgtcagcttgtcgccgaagaaGAATATGCATTTCGTCAGCTTGTCGc > 2:1751588‑M1/76‑101 (MQ=255) aaaGAGAAAGGCGTTAACCGCTTTGCTTTTTATGGTCTTCCGGAATCAAGCGGCAAACGTTGGGCCACTGAGCGCGAATATGCATTTCGTCAGCTTGTCGc > 2:1969212/1‑101 (MQ=255) gtcttccggaatcaagcggcaaacgtggggccactgagcgcgaatatgcatttcgtcagcttgtcgccgaagaaGAATATGCATTTCGTCAGCTTGTCgcn > 1:665994‑M1/75‑100 (MQ=255) aaGAGAAAGGCGTTAACCGCTTTGCTTTTTATGGTCTTCCGGAATCAAGCGGCAAACGTTGGGCCACTGAGCGCGAATATGCATTTCGTCAGCTTGTCGcc > 1:121011/1‑101 (MQ=255) agagAAAGGCGTTAACCGCTTTGCTTTTTATGGTCTTCCGGAATCAAGCGGCAAACGTTGGGCCACTGAGCGCGAATATGCATTTCGTCAGCTTGTCGCCg < 2:2664493/101‑1 (MQ=255) cttccggaatcaagcggcaaacgttgggccactgagcgcgaatatgcatttcgtcagcttgtcgccgaagaaGAATATGCATTTCGTCAGCTTGTCGCCga > 1:3779968‑M1/73‑101 (MQ=255) ttccggaatcaagcggcaaacgttgggccactgagcgcgaatatgcatttcgtcagcttgtcgccgaagaaGAATATGCATTTCGTCAGCTTGTCGCCgaa < 2:3825941‑M1/30‑1 (MQ=255) gaAAGGCGTTAACCGCTTTGCTTTTTATGGTCTTCCGGAATCAAGCGGCAAACGTTGGGCCACTGAGCGCGAATATGCATTTCGTCAGCTTGTCGCCgaag < 1:1456445/101‑1 (MQ=255) gaAAGGCGTTAACCGCTTTGCTTTTTATGGTCTTCCGGAATCAAGCGGCAAACGTTGGGCCACTGAGCGCGAATATGCATTTCGTCAGCTTGTCGCCgaag < 1:2842866/101‑1 (MQ=255) ccggaatcaagcggcaaacgttgggccactgagcgcgaatatgcatttcgtcagcttgtcgccgaagaaGAATATGCATTTCGTCAGCTTGTCGCCgaaga > 2:1185144‑M1/70‑101 (MQ=255) aaaGGCGTTAACCGCTTTGCTTTTTATGGTCTTCCGGAATCAAGCGGCAAACGTTGGGCCACTGAGCGCGAATATGCATTTCGTCAGCTTGTCGCCgaaga < 2:3784174/101‑1 (MQ=255) ggCGTTAACCGCTTTGCTTTTTATGGTCTTCCGGAATCAAGCGGCAAACGTTGGGCCACTGAGCGCGAATATGCATTTCGTCAGCTTGTCGCCGAAGAAga > 1:3865463‑M2/1‑99 (MQ=255) gCGTTAACCGCTTTGCTTTTTATGGTCTTCCGGAATCAAGCGGCAAACGTTGGGCCACTGAGCGCGAATATGCATTTCGTCAGCTTGTCGCCGAAGAAgaa < 2:272443‑M2/101‑4 (MQ=255) aatcaagcggcaaacgttgggccactgagcgcgaatatgcatttcgtcagcttgtcgccgaagaaGAATATGCATTTCGTCAGCTTGTCGCCGAAGAAAAg < 1:3090560‑M1/36‑1 (MQ=255) gTTAACCGCTTTGCTTTTTATGGTCTTCCGGAATCAAGCGGCAAACGTTGGGCCACTGAGCGCGAATATGCATTTCGTCAGCTTGTCGCCGAAGAAgaata > 1:3196522‑M2/1‑96 (MQ=255) tAACCGCTTTGCTTTTTATGGTCTTCCGGAATCAAGCGGCAAACGTTGGGCCACTGAGCGCGAATATGCATTGCTTCAGCTTGTCGCCGAAGAAgaatatg < 2:2363091‑M2/101‑8 (MQ=255) aagcggcaaacgttgggccactgagcgcgaatatgcatttcgtcagcttgtcgccgaagaaGAATATGCATTTCGTCAGCTTGTCGCCGAAGAAAAGTATc > 1:1779513‑M1/62‑101 (MQ=255) aagcggcaaacgttgggccactgagcgcgaatatgcatttcgtcagattgtcgccgaagaaGAATATGCATTTCGTCAGCTTGTCGCCGAAGAAAAGTATc < 1:249775‑M1/40‑1 (MQ=255) aCCGCTTTGCTTTTTATGGTCTTCCGGAATCAAGCGGCAAACGTTGGGCCACTGAGCGCGAATATGCATTTCGTCAGCTTGTCGCCGAAGAAgaatatgca < 1:287005‑M2/101‑10 (MQ=255) cggcaaacgttgggccactgagcgcgaatatgcatttcgtcagcttgtcgccgaagaaGAATATGCATTTCGTCAGCTTGTCGCCGAAGAAAAGTATcgcg < 1:211499‑M1/43‑1 (MQ=255) ccGCTTTGCTTTTTATGGTCTTCCGGAATCAAGCGGCAAACGTTGGGCCACTGAGCGCGAATATGCATTTCGTCAGCTTGTCGCCGAAGAAgaatatgcat > 2:3441459‑M2/1‑91 (MQ=255) cGCTTTGCTTTTTATGGTCTTCCGGAATCAAGCGGCAAACGTTGGGCCACTGAGCGCGAATATGCATTTCGTCAGCTTGTCGCCGAAGAAgaatatgcatt < 1:893800‑M2/101‑12 (MQ=255) cGCTTTGCTTTTTATGGTCTTCCGGAATCAAGCGGCAAACGTTGGGCCACTGAGCGCGAATATGCATTTCGTCAGCTTGTCGCCGAAGAAgaatatgcatt < 1:2162517‑M2/101‑12 (MQ=255) ctttgctttTTATGGTCTTCCGGAATCAAGCGGCAAACGTTGGGCCACTGAGCGCGAATATGCATTTCGTCAGCTTGTCGCCGAAGAAgaatatgcatttc > 1:57975‑M2/1‑88 (MQ=255) tttgctttTTATGGTCTTCCGGAATCAAGCGGCAAACGTTGGGCCACTGAGCGCGAATATGCATTTCGTCAGCTTGTCGCCGAAGAAgaatatgcatttcg < 2:2970366‑M2/101‑15 (MQ=255) tttgctttTTATGGTCTTCCGGAATCAAGCGGCAAACGTTGGGCCACTGAGCGCGAATATGCATTTCGTCAGCTTGTCGCCGAAGAAgaatatgcatttcg > 2:2910459‑M2/1‑87 (MQ=255) gctttTTATGGTCTTCCGGAATCAAGCGGCAAACGTTGGGCCACTGAGCGCGAATATGCATTTCGTCAGCTTGTCGCCGAAGAAgaatatgcatttcgtca > 2:2716968‑M2/1‑84 (MQ=255) tttttATGGTCTTCCGGAATCAAGCGGCAAACGTTGGGCCACTGAGCGCGAATATGCATTTCGTCAGCTTGTCGCCGAAGAAgaatatgcatttcgtcagc > 2:1613874‑M2/1‑82 (MQ=255) ttgggccactgagcgcgaatatgcatttcgtcagcttgtcgccgaagaaGAATATGCATTTCGTCAGCTTGTCGCCGAAGAAAAGTATCGCGGAGTGGttt > 2:2878120‑M1/50‑101 (MQ=255) ttttATGGTCTTCCGGAATCAAGCGGCAAACGTTGGGCCACTGAGCGCGAATATGCATTTCGTCAGCTTGTCGCCGAAGAAgaatatgcatttcgtcagct < 1:138992‑M2/101‑21 (MQ=255) tATGGTCTTCCGGAATCAAGCGGCAAACGTTGGGCCACTGAGCGCGAATATGCATTTCGTCAGCTTGTCGCCGAAGAAgaatatgcatttcgtcagcttgt < 2:3350326‑M2/101‑24 (MQ=255) gccactgagcgcgaatatgcatttcgtcagcttgtcgccgaagaaGAATATGCATTTCGTCAGCTTGTCGCCGAAGAAAAGTATCGCGGAGTGGTTTATCa > 1:179580‑M1/46‑101 (MQ=255) ccactgagcgcgaatatgcatttcgtcagcttgtcgccgaagaaGAATATGCATTTCGTCAGCTTGTCGCCGAAGAAAAGTATCGCGGAGTGGTTTATCAg < 1:770690‑M1/57‑1 (MQ=255) tGGTCTTCCGGAATCAAGCGGCAAACGTTGGGCCACTGAGCGCGAATATGCATTTCGTCAGCTTGTCGCCGAAGAAgaatatgcatttcgtcagcttgtcg > 1:1992933‑M2/1‑76 (MQ=255) cactgagcgcgaatatgcatttcgtcagcttgtcgccgaagaaGAATATGCATTTCGTCAGCTTGTCGCCGAAGAAAAGTATCGCGGAGTGGTTTATCAgg > 2:3262030‑M1/44‑101 (MQ=255) actgagcgcgaatatgcatttcgtcagcttgtcgccgaagaaGAATATGCATTTCGTCAGCTTGTCGCCGAAGAAAAGTATCGCGGAGTGGTTTATCAggg < 2:1906822‑M1/59‑1 (MQ=255) gTCTTCCGGAATCAAGCGGCAAACGTTGGGCCACTGAGCGCGAATATGCATTTCGTCAGCTTGTCGCCGAAGAAgaatatgcatttcgtcagcttgtcgcc > 2:1095680‑M2/1‑74 (MQ=255) tgagcgcgaatatgcatttcgtcagcttgtcgccgaagaaGAATATGCATTTCGTCAGCTTGTCGCCGAAGAAAAGTATCGCGGAGTGGTTTATCAGGGGt < 2:158535‑M1/61‑1 (MQ=255) cTTCCGGAATCAAGCGGCAAACGTTGGGCCACTGAGCGCGAATATGCATTTCGTCAGCTTGTCGCCGAAGAAgaatatgcatttcgtcagcttgtcgccga < 1:2638902‑M2/101‑30 (MQ=255) gcgcgaatatgcatttcgtcagcttgtcgccgaagaaGAATATGCATTTCGTCAGCTTGTCGCCGAAGAAAAGTATCGCGGAGTGGTTTATCAGGGGTTAg > 1:2599515‑M1/38‑101 (MQ=255) gcgaatatgcatttcgtcagcttgtcgccgaagaaGAATATGCATTTCGTCAGCTTGTCGCCGAAGAAAAGTATCGCGGAGTGGTTTATCAGGGGTTAGaa > 2:1484041‑M1/36‑101 (MQ=255) cGGAATCAAGCGGCAAACGTTGGGCCACTGAGCGCGAATATGCATTTCGTCAGCTTGTCGCCGAAGAAgaatatgcatttcgtcagcttgtcgccgaagaa < 1:3675712‑M2/101‑34 (MQ=255) gaatatgcatttcgtcagcttgtcgccgaagaaGAATATGCATTTCGTCAGCTTGTCGCCGAAGAAAAGTATCGCGGAGTGGTTTATCAGGGGTTAGAAAc > 1:3841746‑M1/34‑101 (MQ=255) gaatatgcatttcgtcagcttgtcgccgaagaaGAATATGCATTTCGTCAGCTTGTCGCCGAAGAAAAGTATCGCGGAGTGGTTTATCAGGGGTTAGAAAc > 2:122066‑M1/34‑101 (MQ=255) tatgcatttcgtcagcttgtcgccgaagaaGAATATGCATTTCGTCAGCTTGTCGCCGAAGAAAAGTATCGCGGAGTGGTTTATCAGGGGTTAGAAACcgc > 2:104655‑M1/31‑101 (MQ=255) atgcatttcgtcagcttgtcgccgaagaaGAATATGCATTTCGTCAGCTTGTCGCCGAAGAAAAGTATCGCGGAGTGGTTTATCAGGGGTTAGAAACcgcg > 2:2188738‑M1/30‑101 (MQ=255) ggCAAACGTTGGGCCACTGAGCGCGAATATGCATTTCGTCAGCTTGTCGCCGAAGAAgaatatgcatttcgtcagcttgtcgccgaagaaaagtatcgcgg > 2:1526683‑M2/1‑57 (MQ=255) gCAAACGTTGGGCCACTGAGCGCGAATATGCATTTCGTCAGCTTGTCGCCGAAGAAgaatatgcatttcgtcagcttgtcgccgaagaaaagtatcgcgga > 1:2116618‑M2/1‑56 (MQ=255) tcgtcagcttgtcgccgaagaaGAATATGCATTTCGTCAGCTTGTCGCCGAAGAAAAGTATCGCGGAGTGGTTTATCAGGGGTTAGAAACCGCGCCAgaga < 1:3243237‑M1/79‑1 (MQ=255) aaaCGTTGGGCCACTGAGCGCGAATATGCATTNCGTCAGCTTNTCGCCGAAGAAgaatatgcatttcgtcagcttgtcgccgaagaaangtatcgcggagt > 2:2828778‑M2/1‑54 (MQ=255) ttGGGCCACTGAGCGCGAATATGCATTTCGTCAGCTTGTCGCCGAAGAAgaatatgcatttcgtcagcttgtcgccgaagaaaagtatcgcggagtggttt > 2:3930998‑M2/1‑49 (MQ=255) gcttgtcgccgaagaaGAATATGCATTTCGTCAGCTTGTCGCCGAAGAAAAGTATCGCGGAGTGGTTTATCAGGGGTTAGAAACCGCGCCAGAGAACTGGc < 2:303385‑M1/85‑1 (MQ=255) cgccgaagaaGAATCTGCATTTCGTCAGCTTGTCGCCGAAGAAAAGTATCGCGGAGTGGTTTATCAGGGGTTAGAAACCGCGCCAGAGAACTGGCAACAcg > 2:1296633‑M1/11‑101 (MQ=255) cgccgaagaaGAATATGCATTTCGTCAGCTTGTCGCCGAAGAAAAGTATCGCGGAGTGGTTTATCAGGGGTTAGAAACCGCGCCAGAGAACTGGCAACAcg < 1:1700862‑M1/91‑1 (MQ=255) cgccgaagaaGAATATGCATTTCGTCAGCTTGTCGCCGAAGAAAAGTATCGCGGAGTGGTTTATCAGGGGTTAGAAACCGCGCCAGAGAACTGGCAACAcg < 1:2278962‑M1/91‑1 (MQ=255) aCTGAGCGCGAATATGCATTTCGTCAGCTTGTCGCCGAAGAAgaatatgcatttcgtcagcttgtcgccgaagaaaagtatcgcggagtggtttatcaggg > 1:3372842‑M2/1‑42 (MQ=255) ccgaagaaGAATATGCATTTCGTCAGCTTGTCGCCGAAGAAAAGTATCGCGGAGTGGTTTATCAGGGGTTAGAAACCGCGCCAGAGAACTGGCAACAcgcg < 1:3655686‑M1/93‑1 (MQ=255) cTGAGCGCGAATATGCATTTCGTCAGCTTGTCGCCGAAGAAgaatatgcatttcgtcagcttgtcgccgaagaaaagtatcgcggagtggtttatcagggg > 2:224522‑M2/1‑41 (MQ=255) cTGAGCGCGAATATGCATTTCGTCAGCTTGTCGCCGAAGAAgaatatgcatttcgtcagcttgtcgccgaagaaaagtatcgcggagtggtttatcagggg > 2:2418319‑M2/1‑41 (MQ=255) cgaagaaGAATATGCATTTCGTCAGCTTGTCGCCGAAGAAAAGGATCGCGGAGTGGTTTATCAGGGGTTAGAAACCGCGCCAGAGAACTGGCAACACgcgc < 2:3639603‑M1/94‑1 (MQ=255) gaagaaGAATATGCATTTCGTCAGCTTGTCGCCGAAGAAAAGTATCGCGGAGTGGTTTATCAGGGGTTAGAAACCGCGCCAGAGAACTGGCAACACGCGCa > 1:3025342‑M1/7‑101 (MQ=255) gaagaaGAATATGCATTTCGTCAGCTTGTCGCCGAAGAAAAGTATCGCGGAGTGGTTTATCAGGGGTTAGAAACCGCGCCAGAGAACTGGCAACACGCGCa > 2:552723‑M1/7‑101 (MQ=255) aagaaGAATATGCATTTCGTCAGCTTGTCGCCGAAGAAAAGTATCGCGGAGTGGTTTATCAGGGGTTAGAAACCGCGCCAGAGAACTGGCAACACGCGCaa < 1:704124‑M1/96‑1 (MQ=255) gcgcGAATATGCATTTCGTCAGCTTGTCGCCGAAGAAgaatatgcatttcgtcagcttgtcgccgaagaaaagtatcgcggagtggtttatcaggggttag > 2:1776874‑M2/1‑37 (MQ=255) gaaGAATATGCATTTCGTCAGCTTGTCGCCGAAGAAAAGTATCGCGGAGTGGTTTATCAGGGGTTAGAAACCGCGCCAGAGAACTGGCAACACGCGCaaaa < 1:1018441‑M1/98‑1 (MQ=255) gcgAATATGCATTTCGTCAGCTTGTCGCCGAAGAAgaatatgcatttcgtcagcttgtcgccgaagaaaagtatcgcggagtggtttatcaggggttagaa < 1:2938228‑M2/101‑67 (MQ=255) aaGAATATGCATTTCGTCAGCTTGTCGCCGAAGAAAAGTATCGCGGAGTGGTTTATCAGGGGTTAGAAACCGCGCCAGAGAACTGGCAACACGCGCAAAAt < 1:1070019‑M1/99‑1 (MQ=255) cgAATATGCATTTCGTCAGCTTGTCGCCGAAGAAgaatatgcatttcgtcagcttgtcgccgaagaaaagtatcgcggagtggtttatcaggggttagaaa > 1:549814‑M2/1‑34 (MQ=255) aGAATATGCATTTCGTCAGCTTGTCGCCGAAGAAAAGTATCGCGGAGTGGTTTATCAGGGGTTAGAAACCGCGCCAGAGAACTGGCAACACGCGCAAAATc > 1:1886423‑M1/2‑101 (MQ=255) | GGTTGAAAGCGCATTTTTGCATTTAAAAGAGAAAGGCGTTAACCGCTTTGCTTTTTATGGTCTTCCGGAATCAAGCGGCAAACGTTGGGCCACTGAGCGCGAATATGCATTTCGTCAGCTTGTCGCCGAAGAAAAGTATCGCGGAGTGGTTTATCAGGGGTTAGAAACCGCGCCAGAGAACTGGCAACACGCGCAAAATCG > CP009273/3728656‑3728856 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |