| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 3728756 = | 83 (0.500) | 177 (1.070) | 116/200 | 0.1 | 71.4% | coding (418/1179 nt) | xylR | xylose divergent operon transcriptional activator |
| ? | CP009273 | = 3728788 | 59 (0.360) | coding (450/1179 nt) | xylR | xylose divergent operon transcriptional activator | |||||
Only 100 of 343 total aligned reads displayed.
AAGGCGTTAACCGCTTTGCTTTTTATGGTCTTCCGGAATCAAGCGGCAAACGTTGGGCCACTGAGCGCGAATATGCATTTCGTCAGCTTGTCGCCGAAGAAAAGTATCGCGGAGTGGTTTATCAGGGGTTAGAAACCGCGCCAGAGAACTGGCAACACGCGCAAAATCGGCTGGCAGACTGGCTACAAACGCTACCACCGC > CP009273/3728688‑3728888 | cggaatcaagcggcaaacgttgggccactgagcgcgaatatgcatttcgtcagcttgtcgccgaagaaGAATATGCATTTCGTCAGCTTGTCGCCgaagaa < 1:3675712‑M1/33‑1 (MQ=255) ggCGTTAACCGCTTTGCTTTTTATGGTCTTCCGGAATCAAGCGGCAAACGTTGGGCCACTGAGCGCGAATATGCATTTCGTCAGCTTGTCGCCGAAGAAga > 1:3865463‑M2/1‑99 (MQ=255) cGTTAACCGCTTTGCTTTTTATGGTCTTCCGGAATCAAGCGGCAAACGTTGGGCCACTGAGCGCGAATATGCATTTCGTCAGCTTGTCGCCGAAGAAgaat < 2:541347‑M2/101‑5 (MQ=255) gTTAACCGCTTTGCTTTTTATGGTCTTCCGGAATCAAGCGGCAAACGTTGGGCCACTGAGCGCGAATATGCATTTCGTCAGCTTGTCGCCGAAGAAgaata > 1:3196522‑M2/1‑96 (MQ=255) ccGCTTTGCTTTTTATGGTCTTCCGGAATCAAGCGGCAAACGTTGGGCCACTGAGCGCGAATATGCATTTCGTCAGCTTGTCGCCGAAGAAgaatatgcat > 2:3441459‑M2/1‑91 (MQ=255) ggcaaacgttgggccactgagcgcgaatatgcatttcgtcagcttgtcgccgaagaaGAATATGCATTTCGTCAGCTTGTCGCCGAAGAAAAGTATCGCgg > 2:1526683‑M1/58‑101 (MQ=255) cGCTTTGCTTTTTATGGTCTTCCGGAATCAAGCGGCAAACGTTGGGCCACTGAGCGCGAATATGCATTTCGTCAGCTTGTCGCCGAAGAAgaatatgcatt < 1:2162517‑M2/101‑12 (MQ=255) cGCTTTGCTTTTTATGGTCTTCCGGAATCAAGCGGCAAACGTTGGGCCACTGAGCGCGAATATGCATTTCGTCAGCTTGTCGCCGAAGAAgaatatgcatt < 1:893800‑M2/101‑12 (MQ=255) gctttgctttTTATGGTCTTCCGGAATCAAGCGGCAAACGTTGGGCCACTGAGCGCGAATATGCATTTCGTCAGCTTGTCGCCGAAGAAgaatatgcattt < 2:3372842‑M2/101‑13 (MQ=255) gctttgctttTTATGGTCTTCCGGAATCAAGCGGCAAACGTTGGGCCACTGAGCGCGAATATGCATTTCGTCAGCTTGTCGCCGAAGAAgaatatgcattt > 2:3506658‑M2/1‑89 (MQ=255) gcaaacgttgggccactgagcgcgaatatgcatttcgtcagcttgtcgccgaagaaGAATATGCATTTCGTCAGCTTGTCGCCGAAGAAAAGTATCGCGGa < 1:82213‑M1/45‑1 (MQ=255) ctttgctttTTATGGTCTTCCGGAATCAAGCGGCAAACGTTGGGCCACTGAGCGCGAATATGCATTTCGTCAGCTTGTCGCCGAAGAAgaatatgcatttc < 2:2092599‑M2/101‑14 (MQ=255) tttgctttTTATGGTCTTCCGGAATCAAGCGGCAAACGTTGGGCCACTGAGCGCGAATATGCATTTCGTCAGCTTGTCGCCGAAGAAgaatatgcatttcg > 2:2910459‑M2/1‑87 (MQ=255) aaacgttgggccactgagcgcgaatatgcattncgtcagcttntcgccgaagaaGAATATGCATTTCGTCAGCTTGTCGCCGAAGAAANGTATCGCGGAGt > 2:2828778‑M1/55‑101 (MQ=255) cgttgggccactgagcgcgaatatgcatttcgtcagcttgtcgccgaagaaGAATATGCATTTCGTCAGCTTGTCGCCGAAGAAAAGTATCGCGGAGTGGt < 2:2999931‑M1/50‑1 (MQ=255) gttgggccactgagcgcgaatatgcatttcgtcagcttgtcgccgaagaaGAATATGCATTTCGTCAGCTTGTCGCCGAAGAAAAGTATCGCGGAGTGGtt > 2:3035997‑M1/51‑101 (MQ=255) ttgggccactgagcgcgaatatgcatttcgtcagcttgtcgccgaagaaGAATATGCATTTCGTCAGCTTGTCGCCGAAGAAAAGTATCGCGGAGTGGttt > 2:2878120‑M1/50‑101 (MQ=255) ttttATGGTCTTCCGGAATCAAGCGGCAAACGTTGGGCCACTGAGCGCGAATATGCATTTCGTCAGCTTGTCGCCGAAGAAgaatatgcatttcgtcagct < 1:154362‑M2/101‑21 (MQ=255) ttttATGGTCTTCCGGAATCAAGCGGCAAACGTTGGGCCACTGAGCGCGAATATGCATTTCGTCAGCTTGTCGCCGAAGAAgaatatgcatttcgtcagct < 1:2582038‑M2/101‑21 (MQ=255) ttttATGGTCTTCCGGAATCAAGCGGCAAACGTTGGGCCACTGAGCGCGAATATGCATTTCGTCAGCTTGTCGCCGAAGAAgaatatgcatttcgtcagct < 1:138992‑M2/101‑21 (MQ=255) ttttATGGTCTTCCGGAATCAAGCGGCAAACGTTGGGCCACTGAGCGCGAATATGCATTTCGTCAGCTTGTCGCCGAAGAAgaatatgcatttcgtcagct > 1:2714507‑M2/1‑81 (MQ=255) tATGGTCTTCCGGAATCAAGCGGCAAACGTTGGGCCACTGAGCGCGAATATGCATTTCGTCAGCTTGTCGCCGAAGAAgaatatgcatttcgtcagcttgt < 1:224522‑M2/101‑24 (MQ=255) aTGGTCTTCCGGAATCAAGCGGCAAACGTTGGGCCACTGAGCGCGAATATGCATTTCGTCAGCTTGTCGCCGAAGAAgaatatgcatttcgtcagcttgtc > 1:1787752‑M2/1‑77 (MQ=255) cactgagcgcgaatatgcatttcgtcagcttgtcgccgaagaaGAATATGCATTTCGTCAGCTTGTCGCCGAAGAAAAGTATCGCGGAGTGGTTTATCAgg > 2:3813505‑M1/44‑101 (MQ=255) actgagcgcgaatatgcatttcgtcagcttgtcgccgaagaaGAATATGCATTTCGTCAGCTTGTCGCCGAAGAAAAGTATCGCGGAGTGGTTTATCAggg > 1:3372842‑M1/43‑101 (MQ=255) ctgagcgcgaatatgcatttcgtcagcttgtcgccgaagaaGAATATGCATTTCGTCAGCTTGTCGCCGAAGAAAAGTATCGCGGAGTGGTTTATCAgggg > 2:224522‑M1/42‑101 (MQ=255) ttCCGGAATCAAGCGGCAAACGTTGGGCCACTGAGCGCGAATATGCATTTCGTCAGCTTGTCGCCGAAGAAgaatatgcatttcgtcagcttgtcgccgaa > 1:847430‑M2/1‑71 (MQ=255) gcgcgaatatgcatttcgtcagcttgtcgccgaagaaGAATATGCATTTCGTCAGCTTGTCGCCGAAGAAAAGTATCGCGGAGTGGTTTATCAGGGGTTAg > 2:1776874‑M1/38‑101 (MQ=255) gcgcgaatatgcatttcgtcagcttgtcgccgaagaaGAATATGCATTTCGTCAGCTTGTCGCCGAAGAAAAGTATCGCGGAGTGGTTTATCAGGGGTTAg > 2:3946539‑M1/38‑101 (MQ=255) cgcgaatatgcatttcgtcagcttgtcgccgaagaaGAATATGCATTTCGTCAGCTTGTCGCCGAAGAAAAGTATCGCGGAGTGGTTTATCAGGGGTTAGa < 2:168020‑M1/65‑1 (MQ=255) ccGGAATCAAGCGGCAAACGTTGGGCCACTGAGCGCGAATATGCATTTCGTCAGCTTGTCGCCGAAGAAgaatatgcatttcgtcagcttgtcgccgaaga < 2:1257410‑M2/101‑33 (MQ=255) gcgaatatgcatttcgtcagcttgtcgccgaagaaGAATATGCATTTCGTCAGCTTGTCGCCGAAGAAAAGTATCGCGGAGTGGTTTATCAGGGGTTAGaa < 1:2938228‑M1/66‑1 (MQ=255) aaTCAAGCGGCAAACGTTGGGCCACTGAGCGCGAATATGCATTTCGTCAGCTTGTCGCCGAAGAAgaatatgcatttcgtcagcttgtcgccgaagaaaag < 1:3090560‑M2/101‑37 (MQ=255) atatgcatttcgtcagcttgtcgccgaagaaGAATATGCATTTCGTCAGCTTGTCGCCGAAGAAAAGTATCGCGGAGTGGTTTATCAGGGGTTAGAAACcg < 1:345719‑M1/70‑1 (MQ=255) tatgcatttcgtcagcttgtcgccgaagaaGAATATGCATTTCGTCAGCTTGTCGCCGAAGAAAAGTATCGCGGAGTGGTTTATCAGGGGTTAGAAACcgc > 2:104655‑M1/31‑101 (MQ=255) atgcatttcgtcagcttgtcgccgaagaaGAATATGCATTTCGTCAGCTTGTCGCCGAAGAAAAGTATCGCGGAGTGGTTTATCAGGGGTTAGAAACcgcg > 2:3460275‑M1/30‑101 (MQ=255) atgcatttcgtcagcttgtcgccgaagaaGAATATGCATTTCGTCAGCTTGTCGCCGAAGAAAAGTATCGCGGAGTGGTTTATCAGGGGTTAGAAACcgcg > 1:2677179‑M1/30‑101 (MQ=255) atgcatttcgtcagcttgtcgccgaagaaGAATATGCATTTCGTCAGCTTGTCGCCGAAGAAAAGTATCGCGGAGTGGTTTATCAGGGGGTAGAAACcgcg < 2:1597213‑M1/72‑1 (MQ=255) aGCGGCAAACGTTGGGCCACTGAGCGCGAATATGCATTTCGTCAGCTTGTCGCCGAAGAAgaatatgcatttcgtcagcttgtcgccgaagaaaagtatcg > 1:368129‑M2/1‑60 (MQ=255) catttcgtcagcttgtcgccgaagaaGAATATGCATTTCGTCAGCTTGTCGCCGAAGAAAAGTATCGCGGAGTGGTTTATCAGGGGTTAGAAACCGCGCCa < 1:2652090‑M1/75‑1 (MQ=255) cGGCAAACGTTGGGCCACTGAGCGCGAATATGCATTTCGTCAGCTTGTCGCCGAAGAAgaatatgcatttcgtcagcttgtcgccgaagaaaagtatcgcg < 1:211499‑M2/101‑44 (MQ=255) ttcgtcagcttgtcgccgaagaaGAATATGCATTTCGTCAGCTTGTCGCCGAAGAAAAGTATCGCGGAGTGGTTTATCAGGGGTTAGAAACCGCGCCagag < 2:2017111‑M1/78‑1 (MQ=255) cAAACGTTGGGCCACTGAGCGCGAATATGCATTTCGTCAGCTTGTCGCCGAAGAAgaatatgcatttcgtcagcttgtcgccgaagaaaagtatcgcggag > 1:1955885‑M2/1‑55 (MQ=255) cAAACGTTGGGCCACTGAGCGCGAATATGCATTTCGTCAGCTTGTCGCCGAAGAAgaatatgcatttcgtcagcttgtcgccgaagaaaagtatcgcggag > 1:1270645‑M2/1‑55 (MQ=255) aaaCGTTGGGCCACTGAGCGCGAATATGCATTTCGTCAGCTTGTCGCCGAAGAAgaatatgcatttcgtcagcttgtcgccgaagaaaagtatcgcggagt > 2:1554731‑M2/1‑54 (MQ=255) gtcagcttgtcgccgaagaaGAATATGCATTTCGTCAGCTTGTCGCCGAAGAAAAGTATCGCGGAGTGGTTTATCAGGGGTTAGAAACCGCGCCAGAGAAc > 2:3286319‑M1/21‑101 (MQ=255) cagcttgtcgccgaagaaGAATATGCATTTCGTCAGCTTGTCGCCGAAGAAAAGTATCGCGGAGTGGTTTATCAGGGGTTAGAAACCGCGCCAGAGAACTg > 1:982944‑M1/19‑101 (MQ=255) gcttgtcgccgaagaaGAATATGCATTTCGTCAGCTTGTCGCCGAAGAAAAGTATCGCGGAGTGGTTTATCAGGGGTTAGAAACCGCGCCAGAGAACTGGc < 2:227254‑M1/85‑1 (MQ=255) gtcgccgaagaaGAATATGCATTTCGTCAGCTTGTCGCCGAAGAAAAGTATCGCGGAGTGGTTTATCAGGGGTTAGAAACCGCGCCAGAGAACTGGCAaca > 2:2624204‑M1/13‑101 (MQ=255) gCCACTGAGCGCGAATATGCATTTCGTCAGCTTGTCGCCGAAGAAgaatatgcatttcgtcagcttgtcgccgaagaaaagtatcgcggagtggtttatca > 1:1727350‑M2/1‑45 (MQ=255) ccACTGAGCGCGAATATGCATTTCGTCAGCTTGTCGCCGAAGAAgaatatgcatttcgtcagcttgtcgccgaagaaaagtatcgcggagtggtttatcag < 2:1093293‑M2/101‑58 (MQ=255) cgccgaagaaGAATATGCATTTCGTCAGCTTGTCGCCGAAGAAAAGTATCGCGGAGTGGTTTATCAGGGGTTAGAAACCGCGCCAGAGAACTGGCAACAcg < 1:1700862‑M1/91‑1 (MQ=255) cgccgaagaaGAATATGCATTTCGTCAGCTTGTCGCCGAAGAAAAGTATCGCGGAGTGGTTTATCAGGGGTTAGAAACCGCGCCAGAGAACTGGCAACAcg < 1:2309234‑M1/91‑1 (MQ=255) aCTGAGCGCGAATATGCATTTCGTCAGCTTGTCGCCGAAGAAgaatatgcatttcgtcagcttgtcgccgaagaaaagtatcgcggagtggtttatcaggg < 2:1906822‑M2/101‑60 (MQ=255) cTGAGCGCGAATATGCATTTCGTCAGCTTGTCGCCGAAGAAgaatatgcatttcgtcagcttgtcgccgaagaaaagtatcgcggagtggtttatcagggg > 2:2418319‑M2/1‑41 (MQ=255) gaagaaGAATATGCATTTCGTCAGCTTGTCGCCGAAGAAAAGTATCGCGGAGTGGTTTATCAGGGGTTAGAAACCGCGCCAGAGAACTGGCAACACGCGCa < 2:1315435‑M1/95‑1 (MQ=255) gaagaaGAATATGCATTTCGTCAGCTTGTCGCCGAAGAAAAGTATCGCGGAGTGGTTTATCAGGGGTTAGAAACCGCGCCAGAGAACTGGCAACACGCGCa > 1:3025342‑M1/7‑101 (MQ=255) gaagaaGAATATGCATTTCGTCAGCTTGTCGCCGAAGAAAAGTATCGCGGAGTGGTTTATCAGGGGTTAGAAACCGCGCCAGAGAACTGGCAACACGCGCa > 2:552723‑M1/7‑101 (MQ=255) gAGCGCGAATATGCATTTCGTCAGCTTGTCGCCGAAGAAgaatatgcatttcgtcagcttgtcgccgaagaaaagtatcgcggagtggtttatcaggggtt < 1:1402541‑M2/101‑63 (MQ=255) gaaGAATATGCATTTCGTCAGCTTGTCGCCGAAGAAAAGTATCGCGGAGTGGTTTATCAGGGGTTAGAAACCGCGCCAGAGAACTGGCAACACGCGCaaaa < 1:1018441‑M1/98‑1 (MQ=255) gcgAATATGCATTTCGTCAGCTTGTCGCCGAAGAAgaatatgcatttcgtcagcttgtcgccgaagaaaagtatcgcggagtggtttatcaggggttagaa > 2:1484041‑M2/1‑35 (MQ=255) aaGACTATGCATTTCGTCAGCTTGTCGCCGAAGAAAAGTATCGCGGAGTGGTTTATCAGGGGTTAGAAACCGCGCCAGAGAACTGGCAACACGCGCAAAAt > 2:1209831‑M1/3‑101 (MQ=255) cgAATATGCATTTCGTCAGCTTGTCGCCGAAGAAgaatatgcatttcgtcagcttgtcgccgaagaaaagtatcgcggagtggtttatcaggggttagaaa > 1:549814‑M2/1‑34 (MQ=255) aaTATGCATTTCGTCAGCTTGTCGCCGAAGAAgaatatgcatttcgtcagcttgtcgccgaagaaaagtatcgcggagtggtttatcaggggttagaaacc < 1:2816634‑M2/101‑70 (MQ=255) atGCATTTCGTCAGCTTGTCGCCGAAGAAgaatatgcatttcgtcagcttgtcgccgaagaaaagtatcgcggagtggtttatcaggggttagaaaccgcg > 2:2188738‑M2/1‑29 (MQ=255) atGCATTTCGTCAGCTTGTCGCCGAAGAAAAGTATCGCGGAGTGGGTTATCAGGGGTTAGAAACCGCGCCAGAGAACTGGCAACACGCGCAAAATCGGCTg > 2:592509/1‑101 (MQ=255) cATTTCGTCAGCTTGTCGCCGAAGAAgaatatgcatttcgtcagcttgtcgccgaagaaaagtatcgcggagtggtttatcaggggttagaaaccgcgcca > 1:3817526‑M2/1‑26 (MQ=255) cATTTCGTCAGCTTGTCGCCGAAGAAAAGTATCGCGGAGTGGTTTATCAGGGGTTAGAAACCGCGCCAGAGAACTGGCAACACGCGCAAAATCGGCTGGCa > 2:2395357/1‑101 (MQ=255) aTTTCGTCAGCTTGTCGCCGAAGAAAAGTATCGCGGAGTGGTTTATCAGGGGTTAGAAACCGCGCCAGAGAACTGGCAACACGCGCAAAATCGGCTGGCAg < 2:2711653/101‑1 (MQ=255) tttCGTCAGCTTGTCGCCGAAGAAgaatatgcatttcgtcagcttgtcgccgaagaaaagtatcgcggagtggtttatcaggggttagaaaccgcgccaga > 2:2724155‑M2/1‑24 (MQ=255) ttCGTCAGCTTGTCGCCGAAGAAgaatatgcatttcgtcagcttgtcgccgaagaaaagtatcgcggagtggtttatcaggggttagaaaccgcgccagag < 2:3062649‑M2/101‑79 (MQ=255) ttCGTCAGCTTGTCGCCGAAGAAgaatatgcatttcgtcagcttgtcgccgaagaaaagtatcgcggagtggtttatcaggggttagaaaccgcgccagag > 1:673628‑M2/1‑23 (MQ=255) ttCGTCAGCTTGTCGCCGAAGAAAAGTATCGCGGAGTGGTTTATCAGGGGTTAGAAACCGCGCCAGAGAACTGGCAACACGCGCAAAATCGGCTGGCAGAc < 2:3872809/101‑1 (MQ=255) tCGTCAGCTTGTCGCCGAAGAAgaatatgcatttcgtcagcttgtcgccgaagaaaagtatcgcggagtggtttatcaggggttagaaaccgcgccagaga < 1:3243237‑M2/101‑80 (MQ=255) tCGTCAGCTTGTCGCCGAAGAAgaatatgcatttcgtcagcttgtcgccgaagaaaagtatcgcggagtggtttatcaggggttagaaaccgcgccagaga < 1:2475231‑M2/101‑80 (MQ=255) cGTCAGCTTGTCGCCGAAGAAgaatatgcatttcgtcagcttgtcgccgaagaaaagtatcgcggagtggtttatcaggggttagaaaccgcgccagagaa > 2:3676844‑M2/1‑21 (MQ=255) cGTCAGCTTGTCGCCGAAGAAAAGTATCGCGGAGTGGTTTATCAGGGGTTAGAAACCGCGCCAGAGAACTGGCAACACGCGCAAAATCGGCTGGCAGACTg < 1:2052734/101‑1 (MQ=255) gTCAGCTTGTCGCCGAAGAAAAGTATCGCGGAGTGGTTTATCAGGGGTTAGAAACCGCGCCAGAGAACTGGCAACACGCGCAAAATCGGCTGGCAGACTgg > 2:1345336/1‑101 (MQ=255) gTCAGCTTGTCGCCGAAGAAAAGTATCGCGGAGTGGTTTATCAGGGGTTAGAAACCGCGCCAGAGAACTGGCAACACGCGCAAAATCGGCTGGCAGACTgg > 1:452502/1‑101 (MQ=255) gTCAGCTTGTCGCCGAAGAAAAGTATCGCGGAGTGGTTTATCAGGGGTTAGAAACCGCGCCAGAGAACTGGCAACACGCGCAAAATCGGCTGGCAGACTgg < 1:2849839/101‑1 (MQ=255) tCAGCTTGTCGCCGAAGAAAAGTATCGCGGAGTGGTTTATCAGGGGTTAGAAACCGCGCCAGAGAACTGGCAACACGCGCAAAATCGGCTGGCAGACTGGc < 1:575806/101‑1 (MQ=255) cAGCTTGTCGCTGAAGAAgaatatgcatttcgtcagcttgtcgccgaagaaaagtatcgcggagtgctttatcaggggttagaaaccgcgccagagaactg > 1:659204‑M2/1‑18 (MQ=255) cAGCTTGTCGCCGAAGAAAAGTATCGCGGAGTGGTTTATCAGGGGTTAGAAACCGCGCCAGAGAACTGGCAACACGCGCAAAATCGGCTGGCAGACTGGCt < 1:759489/101‑1 (MQ=255) aGCTTGTCGCCGAAGAAAAGTATCGCGGAGTGGTTTATCAGGGGTTAGAAACCGCGCCAGAGAACTGGCAACACGCGCAAAATCGGCTGGCAGACTGGCTa < 2:783628/101‑1 (MQ=255) aGCTTGTCGCCGAAGAAAAGTATCGCGGAGTGGTTTATCAGGGGTTAGAAACCGCGCCAGAGAACTGGCAACACGCGCAAAATCGGCTGGCAGACTGGCTa < 1:3590877/101‑1 (MQ=255) aGATTGTCGCCGAAGAAgaatatgcatttcgtcagcttggcgccgaagaaaagtatcgcggagtggtttatcaggggttagaaaccgcgccagagaactgg < 2:430881‑M2/101‑85 (MQ=255) cTTGTCGCCGAAGAAgaatatgcatttcgtcagcttgtcgccgaagaaaagtatcgcggagtggtttatcaggggttagaaaccgcgccagagaactggca > 1:183652‑M2/1‑15 (MQ=255) tGTCGCCGAAGAAAAGTATCGCGGAGTGGTTTATCAGGGGTTAGAAACCGCGCCAGAGAACTGGCAACACGCGCAAAATCGGCTGGCAGACTGGCTACaaa > 1:2893470/1‑101 (MQ=255) gTCGCCGAAGAAAAGTATCGCGGAGTGGTTTATCAGGGGTTAGAAACCGCGCCAGAGAACTGGCAACACGCGCAAAATCGGCTGGCAGACTGGCTACAAAc < 2:1849552/101‑1 (MQ=255) tCGCCGAAGAAAAGTATCGCGGAGTGGTTTATCAGGGGTTAGAAACCGCGCCAGAGAACTGGCAACACGCGCAAAATCGGCTGGCAGACTGGCTACaaaag > 1:3033248/1‑99 (MQ=255) ccGAAGAAgaatatgcatttcgtcagcttgtcgccgaagaaaagtatcgcggagtggtttatcaggggttagaaaccgcgccagagaactggcaacacgcg < 1:3655686‑M2/101‑94 (MQ=255) ccGAAGAAAAGTATCGCGGAGTGGTTTATCAGGGGTTAGAAACCGCGCCAGAGAACTGGCAACACGCGCAAAATCGGCTGGCAGACTGGCTACAAACGCTa > 1:3548407/1‑101 (MQ=255) cGAAGAAgaatatgcatttcgtcagcttgtcgccgaagaaaagtatcgcggagtggtttatcaggggttagaaaccgcgccagagaactggcaacacgcgc < 2:2868874‑M2/101‑95 (MQ=255) cGAAGAAgaatatgcatctcgtcagcttgtcgccgaagaaaagtatcgcggagtggtttatcaggggttagaaaccgcgccagagaactggcaacacgcgc < 2:3570542‑M2/101‑95 (MQ=255) gaagaaAAGTATCGCGGAGTGGTTTATCAGGGGTTAGAAACCGCGCCAGAGAACTGGCAACACGCGCAAAATCGGCTGGCAGACTGGCTACAAACGCTacc > 1:1043282/1‑101 (MQ=255) aagaaAAGTATCGCGGAGTGGTTTATCAGGGGTTAGAAACCGCGCCAGAGAACTGGCAACACGCGCAAAATCGGCTGGCAGACTGGCTACAAACGCTacca < 2:1154768/101‑1 (MQ=255) agaaAAGTATCGCGGAGTGGTTTATCAGGGGTTAGAAACCGCGCCAGAGAACTGGCAACACGCGCAAAATCGGCTGGCAGACTGGCTACAAACGCTaccac > 1:1115991/1‑101 (MQ=255) gaaAAGTATCGCGGAGTGGTTTATCAGGGGTTAGAAACCGCGCCAGAGAACTGGCAACACGCGCAAAATCGGCTGGCAGACTGGCTACAAACGCTaccacc > 1:251094/1‑101 (MQ=255) agaatatgcatttcgtcagcttgtcgccgaagaaaagtatcgcggagtggtttatcaggggttagaaaccgcgccagagaactggcaacacgcgcaaaatc > 1:1886423‑M2/1‑1 (MQ=255) aaaGTATCGCGGAGTGGTTTATCAGGGGTTAGAAACCGCGCCAGAGAACTGGCAACACGCGCAAAATCGGCTGGCAGACTGGCTACAAACGCTACCACCGc > 2:3218757/1‑101 (MQ=255) | AAGGCGTTAACCGCTTTGCTTTTTATGGTCTTCCGGAATCAAGCGGCAAACGTTGGGCCACTGAGCGCGAATATGCATTTCGTCAGCTTGTCGCCGAAGAAAAGTATCGCGGAGTGGTTTATCAGGGGTTAGAAACCGCGCCAGAGAACTGGCAACACGCGCAAAATCGGCTGGCAGACTGGCTACAAACGCTACCACCGC > CP009273/3728688‑3728888 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |