| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | CP009273 | 2,400,028 | Δ9 bp | coding (85‑93/939 nt) | lrhA ← | transcriptional repressor of flagellar, motility and chemotaxis genes |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | CP009273 | 2400028 | 2400036 | 9 | 190 [0] | [0] 194 | lrhA | transcriptional repressor of flagellar, motility and chemotaxis genes |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | = 2400027 | 0 (0.000) | 174 (1.140) | 105/184 | 0.1 | 100% | coding (94/939 nt) | lrhA | transcriptional repressor of flagellar, motility and chemotaxis genes |
| ? | CP009273 | 2400037 = | 0 (0.000) | coding (84/939 nt) | lrhA | transcriptional repressor of flagellar, motility and chemotaxis genes | |||||
Only 100 of 194 total aligned reads displayed.
CGTGACGAGCGAACAGTTCTTTCCCAACGAGTTGTTCCAGACGCTGCATTTGCTGACTTACGGCGGACTGAGTACGACACACAGCGGCAGCTGCGGCAGCAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGATTTGCACTTATCATATATTATCACTTACTGG > CP009273/2399937‑2400137 | tgttgcgaccgtgacgagcgaacagttctttcccaacgagttgttccagacgctgcatttgctgacttacggcggactgagtacgacacacagcggcagca > 2:2812948‑M2/101‑101 (MQ=255) gcgaccgtgacgagcgaacagttctttcccaacgagttgttccagacgctgcatttgctgacttacggcggactgagtacgacacacagcggcagcAAAAg < 1:1676288‑M2/5‑1 (MQ=255) gaccgtgacgagcgaacagttctttcccaacgagttgttccagacgctgcatttgctgacttacggcggactgagtacgacacacagcggcagcAAAAgtg > 2:920252‑M2/95‑101 (MQ=255) gaccgtgacgagcgaacagttctttcccaacgagttgttccagacgctgcatttgctgacttacggcggactgagtacgacacacagcggcagcAAAAgtg > 1:728927‑M2/95‑101 (MQ=255) gaccgtgacgagcgaacagttctttcccaacgagttgttccagacgctgcatttgctgacttacggcggactgagtacgacacacagcggcagcAAAAgtg > 2:2905726‑M2/95‑101 (MQ=255) ccgtgacgagcgaacagttctttcccaacgagttgttccagacgctgcatttgctgacttacggcggactgagtacgacacacagcggcagcAAAAGTGtt < 1:3795677‑M2/9‑1 (MQ=255) ccgtgacgagcgaacagttctttcccaacgagttgttccagacgctgcatttgctgacttacggcggactgagtacgacacacagcggcagcAAAAGTGtt > 2:2717568‑M2/93‑101 (MQ=255) cgtgacgagcgaacagttctttcccaacgagttgttccagacgctgcatttgctgacttacggcggactgagtacgacacacagcggcagcAAAAGTGTTc < 1:423966‑M2/10‑1 (MQ=255) gtgacgagcgaacagttctttcccaacgagttgttccagacgctgcatttgctgacttacggcggactgagtacgacacacagcggcagcAAAAGTGTTCa < 1:1320815‑M2/11‑1 (MQ=255) gtgacgagcgaacagttctttcccaacgagttgttccagacgctgcatttgctgacttacggcggactgagtacgacacacagcggcagcAAAAGTGTTCa < 1:51141‑M2/11‑1 (MQ=255) tgacgagcgaacagttctttcccaacgagttgttccagacgctgcatttgcggacttacggcggactgagtacgacacacagcggcagcAAAAGTGTTCAg > 1:3452744‑M2/90‑101 (MQ=255) acgagcgaacagttctttcccaacgagttgttccagacgctgcatttgctgacttacggcggactgaggacgacacacagcggcagcAAAAGTGTTCAGAt > 2:2113569‑M2/88‑101 (MQ=255) cgagcgaacagttctttcccaacgagttgttccagacgctgcatttgctgacttacggcggactgagtacgacacacagcggcagcAAAAGTGTTCAGATc < 1:2277455‑M2/15‑1 (MQ=255) gagcgaacagttctttcccaacgagttgttccagacgctgcatttgctgacttacggcggactgagtacgacacacagcggcagcAAAAGTGTTCAGATCg < 2:1724164‑M2/16‑1 (MQ=255) gagcgaacagttctttcccaacgagttgttccagacgctgcatttgctgacttacggcggactgagtacgacacacagcggcagcAAAAGTGTTCAGATCg < 1:2529858‑M2/16‑1 (MQ=255) agcgaacagttctttcccaacgagttgttccagacgctgcatttgctgacttacggcggactgagtacgacacacagcggcagcAAAAGTGTTCAGATCgg < 2:1867362‑M2/17‑1 (MQ=255) gcgaacagttctttcccaacgagttgttccagacgctgcatttgctgacttacggcggactgagtacgacacacagcggcagcAAAAGTGTTCAGATCGgc < 1:1606504‑M2/18‑1 (MQ=255) acagttctttcccaacgagttgttccagacgctgcatttgctgacttacggcggactgagtacgacacacagcggcagcAAAAGTGTTCAGATCGgcaaca > 2:124071‑M2/80‑101 (MQ=255) agttctttcccaacgagttgttccagacgctgcatttgctgacttacggcggactgagtacgacacacagcggcagcAAAAGTGTTCAGATCGgcaacagc > 2:608070‑M2/78‑101 (MQ=255) agttctttcccaacgagttgttccagacgctgcatttgctgacttacggcggactgagtacgacacacagcggcagcAAAAGTGTTCAGATCGgcaacagc > 2:748091‑M2/78‑101 (MQ=255) agttctttcccaacgagttgttccagacgctgcatttgctgacttacggcggactgagtacgacacacagcggcagcAAAAGTGTTCAGATCGgcaacagc < 1:40603‑M2/24‑1 (MQ=255) gttctttcccaacgagttgttccagacgctgcatttgctgacttacggcggactgagtacgacacacagcggcagcAAAAGTGTTCAGATCGgcaacagca > 2:2512548‑M2/77‑101 (MQ=255) ttctttcccaacgagttgttccagacgctgcatttgctgacttacggcggactgagtacgacacacagcggcagcAAAAGGGTTCAGATCGgcaacagcaa > 2:692613‑M2/76‑101 (MQ=255) tctttcccaacgagttgttccagacgctgcatttgctgacttacggcggactgagtacgacacacagcggcagcAAAAGTGTTCAGATCGgcaacagcaac < 1:2227201‑M2/27‑1 (MQ=255) tttcccaacgagttgttccagacgctgcatttgctgacttacggcggactgagtacgacacacagcggcagcAAAAGTGTTCAGATCGGCAACAGcaacaa > 2:2835422‑M2/73‑101 (MQ=255) tcccaacgagttgttccagacgctgcatttgctgacttacggcggactgagtacgacacacagcggcagcAAAAGTGTTCAGATCGGCAACAGCAACAAAt > 2:3073400‑M2/71‑101 (MQ=255) cccaacgagttgttccagacgctgcatttgctgacttacggcggactgagtacgacacacagcggcagcAAAAGTGTTCAGATCGGCAACAGCAACAAATg > 1:320141‑M2/70‑101 (MQ=255) ccaacgagttgttccagacgctgcatttgctgacttacggcggactgagtacgacacacagcggcagcAAAAGTGTTCAGATCGGCAACAGCAACAAATGt < 1:1228580‑M2/33‑1 (MQ=255) ccaacgagttgttccagacgctgcatttgctgacttacggcggactgagtacgacacacagcggcagcAAAAGTGTTCAGATCGGCAACAGCAACAAATGt > 1:3752587‑M2/69‑101 (MQ=255) caacgagttgttccagacgctgcatttgctgacttacggcggactgagtacgacacacagcggcagcAAAAGTGTTCAGATCGGCAACAGCAACAAATGtt < 1:2098582‑M2/34‑1 (MQ=255) cgagttgttccagacgctgcatttgctgacttacggcggactgagtacgacacacagcggcagcAAAAGTGTTCAGATCGGCAACAGCAACAAATGTtctc < 2:1032305‑M2/37‑1 (MQ=255) gagttgttccagacgctgcatttgctgacttacggcggactgagtacgacacacagcggcagcAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTca < 2:3810973‑M2/38‑1 (MQ=255) agttgttccagacgctgcatttgctgacttacggcggactgagtacgacacacagcggcagcAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTcag < 2:3574742‑M2/39‑1 (MQ=255) gttgttccagacgctgcatttgttgacttacggcggactgagtacgacacacagcggcagcAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTcagc > 1:3332725‑M2/62‑101 (MQ=255) gttgttccagacgctgcatttgctgacttacggcggactgagtacgacacacagcggcagcAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTcagc < 1:2910499‑M2/40‑1 (MQ=255) tgttccagacgctgcatttgctgacttacggcggactgagtacgacacacagcggcagcAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTcagcag < 1:2236432‑M2/42‑1 (MQ=255) ttccagacgctgcatttgctgacttacggcggactgagtacgacacacagcggcagcAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGAt > 2:2827720‑M2/58‑101 (MQ=255) ttccagacgctgcatttgctgacttacggcggactgagtacgacacacagcggcagcAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGAt < 1:1507668‑M2/44‑1 (MQ=255) tccagacgctgcatttgctgacttacggcggactgagtacgacacacagcggcagcAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGAtc < 2:1906667‑M2/45‑1 (MQ=255) ccagacgctgcatttgctgacttacggcggactgagtacgacacacagcggcagcAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGAtcg > 2:1994618‑M2/56‑101 (MQ=255) agacgctgcatttgctgacttacggcggactgagtacgacacacagcggcagcAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGAtcgag > 2:2248099‑M2/54‑101 (MQ=255) acgctgcatttgctgacttacggcggactgagtacgacacacagcggcagcAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGAtcgaggt > 1:3361457‑M2/52‑101 (MQ=255) cgctgcatttgctgacttacggcggactgagtacgacacacagcggcagcAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGAtcgaggtc < 2:1092115‑M2/51‑1 (MQ=255) cgctgcatttgctgacttacggcggactgagtacgacacacagcggcagcAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGAtcgaggtc < 2:1025655‑M2/51‑1 (MQ=255) gctgcatttgctgacttacggcggactgagtacgacacacagcggcagcAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGAtcgaggtcg > 2:3432275‑M2/50‑101 (MQ=255) gctgcatttgctgacttacggcggactgagtacgacacacagcggcagcAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGAtcgaggtcg < 1:933799‑M2/52‑1 (MQ=255) ctgcatttgctgacttacggcggactgagtacgacacacagcggcagcAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGAtcgaggtcga < 1:2927739‑M2/53‑1 (MQ=255) tgcatttgctgacttacggcggactgagtacgacacacagcggcagcAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGAtcgaggtcgag < 2:2940135‑M2/54‑1 (MQ=255) tgcatttgctgacttacggcggactgagtacgacacacagcggcagcAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGAtcgagggcgag > 2:1154371‑M2/48‑101 (MQ=255) gcatttgctgacttacggcggactgagtacgacacacagcggcagcAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGAtcgaggtcgagg < 1:3257890‑M2/55‑1 (MQ=255) atttgctgacttccggcggactgagtacgacacacagcggcagcAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGtt < 2:1533884‑M2/57‑1 (MQ=255) atttgctgacttacggcggactgagtacgacacacagcggcagcAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTTTCAGCAGATCGAGGTCGAGGtt > 2:2579694‑M2/45‑101 (MQ=255) atttgctgacttacggcggactgagtacgacacacagcggcagcAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGtt > 1:757910‑M2/45‑101 (MQ=255) atttgctgacttacggcggactgagtacgacacacagcggcagcAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGtt < 2:1038649‑M2/57‑1 (MQ=255) tttgctgacttacggcggactgagtacgacacacagcggcagcAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTa > 2:1225181‑M2/44‑101 (MQ=255) tgctgacttacggcggactgagtacgacacacagcggcagcAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAAt > 2:2635472‑M2/42‑101 (MQ=255) gctgacttacggcggactgagtacgacacacagcggcagcAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAAtt < 1:2240650‑M2/61‑1 (MQ=255) ctgacttacggcggactgagtacgacacacagcggcagcAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTa > 2:543641‑M2/40‑101 (MQ=255) tgacttacggcggactgagtacgacacacagcggcagcAAAAGTGTTTAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTAt > 1:365599‑M2/39‑101 (MQ=255) tgacttacggcggactgagtacgacacacagcggcagcAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTAt > 1:321783‑M2/39‑101 (MQ=255) gacttacggcggactgagtacgacacacagcggcagcAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATc < 1:2303058‑M2/64‑1 (MQ=255) gacttacggcggactgagtacgacacacagcggcagcAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATc < 1:1385165‑M2/64‑1 (MQ=255) cttacggcggactgagtacgacacacagcggcagcAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCgg > 1:3316013‑M2/36‑101 (MQ=255) tacggcggactgagtacgacacacagcggcagcAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGAc < 2:1114749‑M2/68‑1 (MQ=255) acggcggactgagtacgacacacagcggcagcAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACg < 1:1710730‑M2/69‑1 (MQ=255) acggcggactgagtacgacacacagcggcagcAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACg < 1:1644033‑M2/69‑1 (MQ=255) cggcggactgagtacgacacacagcggcagcAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGa < 2:3266055‑M2/70‑1 (MQ=255) cggcggactgagtacgacacacagcggcagcAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGa > 2:1931843‑M2/32‑101 (MQ=255) cggactgagtacgacacacagcggcagcAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGAttt < 2:3436680‑M2/73‑1 (MQ=255) cggactgagtacgacacacagcggcagcAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGAttt < 1:646823‑M2/73‑1 (MQ=255) cggactgagtacgacacacagcggcagcAAAAGTGTTAAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGAttt < 2:2052731‑M2/73‑1 (MQ=255) ggactgagtacgacacacagcggcagcAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGATTTg > 2:3594143‑M2/28‑101 (MQ=255) ggactgagtacgacacacagcggcagcAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGATTTg > 2:2915859‑M2/28‑101 (MQ=255) gactgagtacgacacacagcggcagcAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGATTTGc < 1:1815685‑M2/75‑1 (MQ=255) actgagtacgacacacagcggcagcAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGATTTGCa < 1:1956045‑M2/76‑1 (MQ=255) actgagtacgacacacagcggcagcAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGATTTGCa > 2:3174695‑M2/26‑101 (MQ=255) actgagtacgacacacagcggcagcAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGATTTGCa > 2:3161770‑M2/26‑101 (MQ=255) ctgagtacgacacacagcggcagcAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGATTTGCAc > 1:2964641‑M2/25‑101 (MQ=255) tgagtacgacacacagcggcagcAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGATTTGCACt > 2:3306877‑M2/24‑101 (MQ=255) gagtacgacacacagcggcagcAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGATTTGCACtt > 2:1574287‑M2/23‑101 (MQ=255) gagtacgacacacagcggcagcAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGATTTGCACtt < 1:2717568‑M2/79‑1 (MQ=255) agtacgacacacagcggcagcAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGATTTGCACTTa > 1:3528791‑M2/22‑101 (MQ=255) gtacgacacacagcggcagcAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGATTTGCACTTAt < 1:2826408‑M2/81‑1 (MQ=255) acacacagcggcagcAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAACTATCGGACGATTTGCACTTATCatat < 2:1764586‑M2/86‑1 (MQ=255) acacagcggcagcAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGATTTGCACTTATCatatat > 1:1456112‑M2/14‑101 (MQ=255) acagcggcagcAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGATTTGCACTTATCATAtatta > 1:1438264‑M2/12‑101 (MQ=255) acagcggcagcAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGATTTGCACTTATCATAtatta > 1:11264‑M2/12‑101 (MQ=255) cagcggcagcAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGATTTGCACTTATCATAtattat < 2:1681008‑M2/91‑1 (MQ=255) agcggcagcAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGATTTGCACTTATCATATATTATc > 2:660498‑M2/10‑101 (MQ=255) gcggcagcAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGATTTGCACTTATCATATATTATCa < 2:2307832‑M2/93‑1 (MQ=255) cggcagcAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGATTTGCACTTATCATATATTATCAc < 2:2291670‑M2/94‑1 (MQ=255) ggcagcAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGATTTGCACTTATCATATATTATCACt > 2:1286551‑M2/7‑101 (MQ=255) ggcagcAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGATTTGCACTTATCATATATTATCACt < 2:2820921‑M2/95‑1 (MQ=255) cagcAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGATTTGCACTTATCATATATTATCACTTa < 2:3655886‑M2/97‑1 (MQ=255) agcAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGATTTGCACTTATCATATATTATCACTTAc > 1:1112762‑M2/4‑101 (MQ=255) agcAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGATTTGCACTTATCATATATTATCACTTAc > 1:3050589‑M2/4‑101 (MQ=255) agcAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGATTTGCACTTATCATATATTATCACTTAc > 1:3558113‑M2/4‑101 (MQ=255) gcAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGATTTGCACTTATCATATATTATCACTTACt > 1:660431‑M2/3‑101 (MQ=255) gcAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGATTTGCACTTATCATATATTATCACTTACt < 1:2655031‑M2/99‑1 (MQ=255) cAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGATTTGCACTTATCATATATTATCACTTACTg > 1:2667225‑M2/2‑101 (MQ=255) | CGTGACGAGCGAACAGTTCTTTCCCAACGAGTTGTTCCAGACGCTGCATTTGCTGACTTACGGCGGACTGAGTACGACACACAGCGGCAGCTGCGGCAGCAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGATTTGCACTTATCATATATTATCACTTACTGG > CP009273/2399937‑2400137 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |