BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
MC JC	CP009273	4,581,222	Δ3 bp	intergenic (‑126/‑250)	yjiY ← / → tsr	putative transporter/methyl‑accepting chemotaxis protein I, serine sensor receptor

Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	CP009273	4581222	4581224	3	206 [0]	[0] 207	yjiY/tsr	putative transporter/methyl‑accepting chemotaxis protein I, serine sensor receptor

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP009273	= 4581221	0 (0.000)	205 (1.240)	128/200	0.0	100%	intergenic (‑125/‑253)	yjiY/tsr	putative transporter/methyl‑accepting chemotaxis protein I, serine sensor receptor
*	?	CP009273	4581225 =	0 (0.000)	205 (1.240)	128/200	0.0	100%	intergenic (‑129/‑249)	yjiY/tsr	putative transporter/methyl‑accepting chemotaxis protein I, serine sensor receptor

Only 100 of 206 total aligned reads displayed.

AATAGTTGGCCGAAGCCGTTCTAGGTTTGCGTTGCGTTTGAGGAGGTAAATTGACCGCTATCCTGTAGTGATGTTGCCAGAGTTACGCGCGCGTAAAGTAAGGTAAATAACTGAGTGGTTATTTTAGGGATGTAAGCGGTCAGTTTTGCGGTTGAGCGGCAAAGGCGTCGTTTAAGTGACGATAAATATGTGATTCATATC  >  CP009273/4581121‑4581321

 aTAGTTGGCCGAAGCCGTTCTAGGTTTGCGTTGCGTTTGAGGAGGTAAATTGACCGCTATCCTGTAGTGATGTTGCCAGAGTTACGCGCGCGTAAAGTAAa                                                                                                     >  1:1465273‑M1/1‑100 (MQ=255)

  tAGTTGGCCGAAGCCGTTCTAGGTTTGCGTTGCGTTTGAGGAGGTAAATTGACCGCTATCCTGTAGTGATGTTGCCAGAGTTACGCGCGCGTAAAGTAAaa                                                                                                    <  1:2848541‑M1/101‑3 (MQ=255)

     ttGGCCGAAGCCGTTCTAGGTTTGCGTTGCGTTTGAGGAGGTAAATTGACCGCTATCCTGTAGTGATGTTGCCAGAGTTACGCGCGCGTAAAGTAAaaata                                                                                                 <  2:3896657‑M1/101‑6 (MQ=255)

         ccGAAGCCGTTCTAGGTTTGCGTTGCGTTTGAGGAGGTAAATTGACCGCTATCCTGTAGTGATGTTGCCAGAGTTACGCGCGCGTAAAGTAAaaataactg                                                                                             <  2:244853‑M1/101‑10 (MQ=255)

         ccGAAGCCGTTCTAGGTTTGCGTTGCGTTTGAGGAGGTAAATTGACCGCTATCCTGTAGTGATGTTGCCAGAGTTACGCGCGCGTAAAGTAAaaataactg                                                                                             <  2:3100554‑M1/101‑10 (MQ=255)

         ccGAAGCCGTTCTAGGTTTGCGTTGCGTTTGAGGAGGTAAATTGACCGCTATCCTGTAGTGATGTTGCCAGAGTTACGCGCGCGTAAAGTAAaaataactg                                                                                             <  1:723966‑M1/101‑10 (MQ=255)

           gAAGCCGTTCTAGGTTTGCGTTGCGTTTGAGGAGGTAAATTGACCGCTATCCTGTAGTGATGTTGCCAGAGTTACGCGCGCGTAAAGTAAaaataactgag                                                                                           <  2:1432220‑M1/101‑12 (MQ=255)

           gAAGCCGTTCTAGGTTTGCGTTGCGTTTGAGGAGGTAAATTGACCGCTATCCTGTAGTGATGTTGCCAGAGTTACGCGCGCGTAAAGTAAaaataactgag                                                                                           >  2:1038914‑M1/1‑90 (MQ=255)

           gAAGCCGTTCTAGGTTTGCGTTGCGTTTGAGGAGGTAAATTGACCGCTATCCTGTAGTGATGTTGCCAGAGTTACGCGCGCGTAAAGTAAaaataactgag                                                                                           >  2:2756567‑M1/1‑90 (MQ=255)

            aaGCCGTTCTAGGTTTGCGTTGCGTTTGAGGAGGTAAATTGACCGCTATCCTGTAGTGATGTTGCCAGAGTTACGCGCGCGTAAAGTAAaaataactgagt                                                                                          >  1:2419578‑M1/1‑89 (MQ=255)

             aGCCGTTCTAGGTTTGCGTTGCGTTTGAGGAGGTAAATTGACCGCTATCCTGTAGTGATGTTGCCAGAGTTACGCGCGCGTAAAGTAAaaataactgagtg                                                                                         <  2:1757374‑M1/101‑14 (MQ=255)

             aGCCGTTCTAGGTTTGCGTTGCGTTTGAGGAGGTAAATTGACCGCTATCCTGTAGTGATGTTGCCAGAGTTACGCGCGCGTAAAGTAAaaataactgagtg                                                                                         >  1:2747412‑M1/1‑88 (MQ=255)

             aGCCGTTCTAGGTTTGCGTTGCGTTTGAGGAGGTAAATTGACCGCTATCCTGTAGTGATGTTGCCAGAGTTACGCGCGCGTAAAGTAAaaataactgagtg                                                                                         >  1:3533912‑M1/1‑88 (MQ=255)

               ccGTTCTAGGTTTGCGTTGCGTTTGAGGAGGTAAATTGACCGCTATCCTGTAGTGATGTTGCCAGAGTTACGCGCGCGTAAAGTAAaaataactgagtggt                                                                                       <  1:3907366‑M1/101‑16 (MQ=255)

               ccGTTCTAGGTTTGCGTTGCGTTTGAGGAGGTAAATTGACCGCTATCCTGTAGTGATGTTGCCAGAGTTACGCGCGCGTAAAGTAAaaataactgagtggt                                                                                       >  2:2832912‑M1/1‑86 (MQ=255)

                cGTTCTAGGTTTGCGTTGCGTTTGAGGAGGTAAATTGACCGCTATCCTGTAGTGATGTTGCCAGAGTTACGCGCGCGTAAAGTAAaaataactgagtggtt                                                                                      >  1:481692‑M1/1‑85 (MQ=255)

                cGTTCTAGGTTTGCGTTGCGTTTGAGGAGGTAAATTGACCGCTATCCTGTAGTGATGTTGCCAGAGTTACGCGCGCGTAAAGTAAaaataactgagtggtt                                                                                      >  2:1529349‑M1/1‑85 (MQ=255)

                cGTTCTAGGTTTGCGTTGCGTTTGAGGAGGTAAATTGACCGCTATCCTGTAGTGATGTTGCCAGAGTTACGCGCGCGTAAAGTAAaaataactgagtggtt                                                                                      >  2:3621430‑M1/1‑85 (MQ=255)

                 gTTCTAGGTTTGCGTTGCGTTTGAGGAGGTAAATTGACCGCTATCCTGTAGTGATGTTGCCAGAGTTACGCGCGCGTAAAGTAAaaataactgagtggtta                                                                                     <  2:1139317‑M1/101‑18 (MQ=255)

                 gTTCTAGGTTTGCGTTGCGTTTGAGGAGGTAAATTGACCGCTATCCTGTAGTGATGTTGCCAGAGTTACGCGCGCGTAAAGTAAaaataactgagtggtta                                                                                     <  1:1704315‑M1/101‑18 (MQ=255)

                 gTTCTAGGTTTGCGTTGCGTTTGAGGAGGTAAATTGACCGCTATCCTGTAGTGATGTTGCCAGAGTTACGCGCGCGTAAAGTAAaaataactgagtggtta                                                                                     >  2:1591088‑M1/1‑84 (MQ=255)

                   tCTAGGTTTGCGTTGCGTTTGAGGAGGTAAATTGACCGCTATCCTGTAGTGATGTTGCCAGAGTTACGCGCGCGTAAAGTAAaaataactgagtggttatt                                                                                   >  1:3684446‑M1/1‑82 (MQ=255)

                    cTAGGTTTGCGTTGCGTTTGAGGAGGTAAATTGACCGCTATCCTGTAGTGATGTTGCCAGAGTTACGCGCGCGTAAAGTAAaaataactgagtggttattt                                                                                  >  1:2483845‑M1/1‑81 (MQ=255)

                      aGGTTTGCGTTGCGTTTGAGGAGGTAAATTGACCGCTATCCTGCAGTGATGTTGCCAGAGTTACGCGCGCGTAAAGTAAaaataactgagtggttatttta                                                                                >  2:314987‑M1/1‑79 (MQ=255)

                       ggTTTGCGTTGCGTTTGAGGAGGTAAATTGACCGCTATCCTGTAGTGATGTTGCCAGAGTTACGCGCGCGTAAAGTAAaaataactgagtggttattttag                                                                               <  1:2571627‑M1/101‑24 (MQ=255)

                         tttGCGTTGCGTTTGAGGAGGTAAATTGACCGCTATCCTGTAGTGATGTTGCCAGAGTTACGCGCGCGTAAAGTAAaaataactgagtggttattttaggg                                                                             <  1:1779379‑M1/101‑26 (MQ=255)

                           tgcgttgcgtTTGAGGAGGTAAATTGACCGCTATCCTGTAGTGATGTTGCCAGAGTTACGCGCGCGTAAAGTAAaaataactgagtggttattttagggat                                                                           <  2:3800246‑M1/101‑28 (MQ=255)

                             cgttgcgttTGAGGAGGTAAATTGACCGCTATCCTGTAGTGATGTTGCCAGAGTTACGCGCGCGTAAAGTAAaaataactgagtggttattttagggatgt                                                                         >  2:3120029‑M1/1‑72 (MQ=255)

                               ttgcgttTGAGGAGGTAAATTGACCGCTATCCTGTAGTGATGTTGCCAGAGTTACGCGCGCGTAAAGTAAaaataactgagtggttattttagggatgtaa                                                                       >  2:2114082‑M1/1‑70 (MQ=255)

                                 gcgttTGAGGAGGTAAATTGACCGCTATCCTGTAGTGATGTTGCCAGAGTTACGCGCGCGTAAAGTAAaaataactgagtggttattttagggatgtaagc                                                                     <  1:1674854‑M1/101‑34 (MQ=255)

                                 gcgttTGAGGAGGTAAATTGACCGCTATCCTGTAGTGATGTTGCCAGAGTTACGCGCGCGTAAAGTAAaaataactgagtggttattttagggatgtaagc                                                                     >  1:3441910‑M1/1‑68 (MQ=255)

                                  cgttTGAGGAGGTAAATTGACCGCTATCCTGTAGTGATGTTGCCAGAGTTACGCGCGCGTAAAGTAAaaataactgagtggttattttagggatgtaagcg                                                                    <  1:418139‑M1/101‑35 (MQ=255)

                                  cgttTGAGGAGGTAAATTGACCGCTATCCTGTAGTGATGTTGCCAGAGTTACGCGCGCGTAAAGTAAaaataactgagtggttattttagggatgtaagcg                                                                    <  2:471975‑M1/101‑35 (MQ=255)

                                  cgttTGAGGAGGTAAATTGACCGCTATCCTGTAGTGATGTTGCCAGAGTTACGCGCGCGTAAAGTAAaaataactgagtggttattttagggatgtaagcg                                                                    <  2:794117‑M1/101‑35 (MQ=255)

                                   gttTGAGGAGGTAAATTGACCGCTATCCTGTAGTGATGTTGCCAGAGTTACGCGCGCGTAAAGTAAaaataactgagtggttattttagggatgtaagcgg                                                                   >  2:2040109‑M1/1‑66 (MQ=255)

                                    tttGAGGAGGTAAATTGACCGCTATCCTGTAGTGATGTTGCCAGAGTTACGCGCGCGTAAAGTAAaaataactgagtggttattttagggatgtaagcggt                                                                  >  1:2010831‑M1/1‑65 (MQ=255)

                                      tGAGGAGGTAAATTGACTGCTATCCTGTAGTGATGTTGCCAGAGTTACGCGCGCGTAAAGTAAaaataactgagtggttattttagggatgtaagcggtca                                                                >  2:465000‑M1/1‑63 (MQ=255)

                                         ggaggTAAATTGACCGCTATCCTGTAGTGATGTTGCCAGAGTTACGCGCGCGTAAAGTAAaaataactgagtggttattttagggatgtaagcggtcagtt                                                             <  1:2880470‑M1/101‑42 (MQ=255)

                                          gaggTAAATTGACCGCTATCCTGTAGTGATGTTGCCAGAGTTACGCGCGCGTAAAGTAAaaataactgagtggttattttagggatgtaagcggtcagttt                                                            <  1:1144735‑M1/101‑43 (MQ=255)

                                          gaggTAAATTGACCGCTATCCTGTAGTGATGTTGCCAGAGTTACGCGCGCGTAAAGTAAaaataactgagtggttattttagggatgtaagcggtcagttt                                                            >  1:1118707‑M1/1‑59 (MQ=255)

                                           aggTAAATTGACCGCTATCCTGTAGTGATGTTGCCAGAGTTACGCGCGCGTAAAGTAAaaataactgagtggttattttagggatgtaagcggtcagtttt                                                           <  1:74283‑M1/101‑44 (MQ=255)

                                            ggTAAATTGACCGCTATCCTGTAGTGATGTTGCCAGAGTTACGCGCGCGTAAAGTAAaaataactgagtggttattttagggatgtaagcggtcagttttg                                                          >  1:3733544‑M1/1‑57 (MQ=255)

                                              tAAATTGACCGCTATCCTGTAGTGATGTTGCCAGAGTTACGCGCGCGTAAAGTAAaaataactgagtggttattttcgggatgtaagcggtcagttttgcg                                                        >  2:1810361‑M1/1‑55 (MQ=255)

                                              tAAATTGACCGCTATCCTGTAGTGATGTTGCCAGAGTTACGCGCGCGTAAAGTAAaaataactgagtggttattttagggatgtaagcggtcagttttgcg                                                        <  2:35952‑M1/101‑47 (MQ=255)

                                               aaaTTGACCGCTATCCTGTAGTGATGTTGCCAGAGTTACGCGCGCGTAAAGTAAaaataactgagtggttattttagggatgtaagcggtcagttttgcgg                                                       >  2:3357614‑M1/1‑54 (MQ=255)

                                                aaTTGACCGCTATCCTGTAGTGATGTTGCCAGAGTTACGCGCGCGTAAAGTAAaaataactgagtggttattttagggatgtaagcggtcagttttgcggt                                                      >  2:32448‑M1/1‑53 (MQ=255)

                                                   tGACCGCTATCCTGTAGTGATGTTGCCAGAGTTACGCGCGCGTAAAGTAAaaataactgagtggttattttagggatgtaagcggtcagttttgcggttga                                                   <  2:3178225‑M1/101‑52 (MQ=255)

                                                   tGACCGCTATCCTGTAGTGATGTTGCCAGAGTTACGCGCGCGTAAAGTAAaaataactgagtggttattttagggatgtaagcggtcagttttgcggttga                                                   <  1:1869149‑M1/101‑52 (MQ=255)

                                                    gACCGCTATCCTGTAGTGATGTTGCCAGAGTTACGCGCGCGTAAAGTAAaaataactgagtggttattttagggatgtaagcggtcagttttgcggttgag                                                  >  2:3202203‑M1/1‑49 (MQ=255)

                                                      ccGCTATCCTGTAGTGATGTTGCCAGAGTTACGCGCGCGTAAAGTAAaaataactgagtggttattttagggatgtaagcggtcagttttgcggttgagcg                                                <  2:3531148‑M1/101‑55 (MQ=255)

                                                       cGCTATCCTGTAGTGATGTTGCCAGAGTTACGCGCGCGTAAAGTAAaaataactgagtggttattttagggatgtaagcggtcagttttgcggttgagcgg                                               <  1:2072666‑M1/101‑56 (MQ=255)

                                                        gCTATCCTGTAGTGATGTTGCCAGAGTTACGCGCGCGTAAAGTAAaaataactgagtggttattttagggatgtaagcggtcagttttgcggttgagcggc                                              >  2:2566733‑M1/1‑45 (MQ=255)

                                                          tATCCTGTAGTGATGTTGCCAGAGTTACGCGCGCGTAAAGTAAaaataactgagtggttattttagggatgtaagcggtcagttttgcggttgagcggcaa                                            >  1:1343844‑M1/1‑43 (MQ=255)

                                                           aTCCTGTAGTGATGTTGCCAGAGTTACGCGCGCGTAAAGTAAaaataactgagtggttattttagggatgtaagcggtcagttttgcggttgagcggcaaa                                           >  2:3439269‑M1/1‑42 (MQ=255)

                                                           aTCCTGTAGTGATGTTGCCAGAGTTACGCGCGCGTAAAGTAAaaataactgagtggttattttagggatgtaagcggtcagttttgcggttgagcggcaaa                                           <  2:3283762‑M1/101‑60 (MQ=255)

                                                            tCCTGTAGTGATGTTGCCAGAGTTACGCGCGCGTAAAGTAAaaataactgagtggttattttagggatgtaagcggtcagttttgcggttgagcggcaaag                                          >  1:2381373‑M1/1‑41 (MQ=255)

                                                              cTGTAGTGATGTTGCCAGAGTTACGCGCGCGTAAAGTAAaaataactgagtggttattttagggatgtaagcggtcagttttgcggttgagcggcaaaggc                                        <  2:3549558‑M1/101‑63 (MQ=255)

                                                              cTGTAGTGATGTTGCCAGAGTTACGCGCGCGTAAAGTAAaaataactgagtggttattttagggatgtaagcggtcagttttgcggttgagcggcaaaggc                                        <  1:545105‑M1/101‑63 (MQ=255)

                                                              cTGTAGTGATGTTGCCAGAGTTACGCGCGCGTAAAGTAAaaataactgagtggttattttagggatgtaagcggtcagttttgcggttgagcggcaaaggc                                        >  2:2612606‑M1/1‑39 (MQ=255)

                                                              cTGTAGTGATGTTGCCAGAGTTACGCGCGCGTAAAGTAAaaataactgagtggttattttagggatgtaagcggtcagttttgcggttgagcggcaaaggc                                        >  2:1387339‑M1/1‑39 (MQ=255)

                                                               tGTAGTGATGTTGCCAGAGTTACGCGCGCGTAAAGTAAaaataactgagtggttattttagggatgtaagcggtcagttttgcggttgagcggcaaaggcg                                       >  1:852811‑M1/1‑38 (MQ=255)

                                                                 tAGTGATGTTGCCAGAGTTACGCGCGCGTAAAGTAAaaataactgagtggttattttagggatgtaagcggtcagttttgcggttgagcggcaaaggcgtc                                     <  2:1448851‑M1/101‑66 (MQ=255)

                                                                  aGTGATGTTGCCAGAGTTACGCGCGCGTAAAGTAAaaataactgagtggttattttagggatgtaagcggtcagttttgcggttgagcggcaaaggcgtcg                                    >  2:687189‑M1/1‑35 (MQ=255)

                                                                  aGTGATGTTGCCAGAGTTACGCGCGCGTAAAGTAAaaataactgagtggttattttagggatgtaagcggtcagttttgcggttgagcggcaaaggcgtcg                                    >  2:290133‑M1/1‑35 (MQ=255)

                                                                    tGATGTTGCCAGAGTTACGCGCGCGTAAAGTAAaaataactgagtggttattttagggatgtaagcggtcagttttgcggttgagcggcaaaggcgtcgtt                                  <  2:1464797‑M1/101‑69 (MQ=255)

                                                                    tGATGTTGCCAGAGTTACGCGCGCGTAAAGTAAaaataactgagtggttattttagggatgtaagcggtcagttttgcggttgagcggcaaaggcgtcgtt                                  <  1:3960154‑M1/101‑69 (MQ=255)

                                                                     gATGTTGCCAGAGTTACGCGCGCGTAAAGTAAaaataactgagtggttattttagggatgtaagcggtcagttttgcggttgagcggcaaaggtgtctttt                                 >  1:3343447‑M1/1‑32 (MQ=255)

                                                                     gATGTTGCCAGAGTTACGCGCGCGTAAAGTAAaaataactgagtggttattttagggatgtaagcggtcagttttgcggttgagcggcaaaggcgtcgttt                                 >  2:2172010‑M1/1‑32 (MQ=255)

                                                                     gATGTTGCCAGAGTTACGCGCGCGTAAAGTAAaaataactgagtggttattttagggatgtaagcggtcagttttgcggttgagcggcaaaggcgtcgttt                                 >  1:2946221‑M1/1‑32 (MQ=255)

                                                                         ttGCCAGAGTTACGCGCGCGTAAAGTAAaaataactgagtggttattttagggatgtaagcggtcagttttgcggttgagcggcaaaggcgtcgtttaagt                             <  2:1961520‑M1/101‑74 (MQ=255)

                                                                         ttGCCAGAGTTACGCGCGCGTAAAGTAAaaataactgagtggttattttagggatgtaagcggtcagttttgcggttgagcggcaaaggcgtcgtttaagt                             >  1:1008898‑M1/1‑28 (MQ=255)

                                                                          tGCCAGAGTTACGCGCGCGTAAAGTAAaaataactgagtggttattttagggatgtaagcggtcagttttgcggttgagcggcaaaggcgtcgtttaagtg                            >  1:2336372‑M1/1‑27 (MQ=255)

                                                                          tGCCAGAGTTACGCGCGCGTAAAGTAAaaataactgagtggttattttagggatgtaagcggtcagttttgcggttgagcggcaaaggcgtcgtttaagtg                            >  2:1149434‑M1/1‑27 (MQ=255)

                                                                          tGCCAGAGTTACGCGCGCGTAAAGTAAaaataactgagtggttattttagggatgtaagcggtcagttttgcggttgagcggcaaaggcgtcgtttaagtg                            <  1:3558012‑M1/101‑75 (MQ=255)

                                                                            ccAGAGTTACGCGCGCGTAAAGTAAaaataactgagtggttattttagggatgtaagcggtcagttttgcggttgagcggcaaaggcgtcgtttaagtgac                          <  1:3155730‑M1/101‑77 (MQ=255)

                                                                             cAGAGTTACGCGCGCGTAAAGTAAaaataactgagtggttattttagggatgtaagcggtcagttttgcggttgagcggcaaaggcgtcgtttaagtgacg                         <  1:952074‑M1/101‑78 (MQ=255)

                                                                               gagTTACGCGCGCGTAAAGTAAaaataactgagtggttattttagggatgtaagcggtcagttttgcggttgagcggcaaaggcgtcgtttaagtgacgat                       <  1:3933276‑M1/101‑80 (MQ=255)

                                                                                agTTACGCGCGCGTAAAGTAAaaataactgagtggttattttagggatgtaagcggtcagttttgcggttgagcggcaaaggcgtcgtttaagtgacgata                      <  1:2040109‑M1/101‑81 (MQ=255)

                                                                                agTTACGCGCGCGTAAAGTAAaaataactgagtggttattttagggatgtaagcggtcagttttgcggttgagcggcaaaggcgtcgtttaagtgacgata                      <  1:1304244‑M1/101‑81 (MQ=255)

                                                                                 gTTACGCGCGCGTAAAGTAAaaataactgagtggttattttagggatgtaagcggtcagttttgcggttgagcggcaaaggcgtcgtttaagtgacgataa                     <  1:3861177‑M1/101‑82 (MQ=255)

                                                                                 gTTACGCGCGCGTAAAGTAAaaataactgagtggttattttagggatgtaagcggtcagttttgcggttgagcggcaaaggcgtcgtttaagtgacgataa                     >  2:3501081‑M1/1‑20 (MQ=255)

                                                                                  ttACGCGCGCGTAAAGTAAaaataactgagtggttattttagggatgtaagcggtcagttttgcggttgagcggcaaaggcgtcgtttaagtgacgataaa                    <  2:692809‑M1/101‑83 (MQ=255)

                                                                                  ttACGCGCGCGTAAAGTAAaaataactgagtggttattttagggatgtaagcggtcagttttgcggttgagcggcaaaggcgtcgtttaagtgacgataaa                    <  2:1362148‑M1/101‑83 (MQ=255)

                                                                                   tACGCGCGCGTAAAGTAAaaataactgagtggttattttagggatgtaagcggtcagttttgcggttgagcggcaaaggcgtcgtttaagtgacgataaat                   <  2:296057‑M1/101‑84 (MQ=255)

                                                                                   tACGCGCGCGTAAAGTAAaaataactgagtggttattttagggatgtaagcggtcagttttgcggttgagcggcaaaggcgtcgtttaagtgacgataaat                   <  2:1699305‑M1/101‑84 (MQ=255)

                                                                                    aCGCGCGCGTAAAGTAAaaataactgagtggttattttagggatgtaagcggtcagttttgcggttgagcggcaaaggcgtcgtttaagtgacgataaata                  <  1:2832912‑M1/101‑85 (MQ=255)

                                                                                     cgcgcgcgTAAAGTAAaaataactgagtggttattttagggatgtaagcggtcagttttgcggttgagcggcaaaggcgtcgtttaagtgatgataaatat                 <  1:2244549‑M1/101‑86 (MQ=255)

                                                                                     cgcgcgcgTAAAGTAAaaataactgagtggttattttagggatgtaagcggtcagttttgcggttgagcggcaaaggcgtcgtttaagtgacgataaatat                 >  2:1282157‑M1/1‑16 (MQ=255)

                                                                                       cgcgcgTAAAGTAAaaataactgagtggttattttagggatgtaagcggtcagtttttcggttgagcggcaaaggcgtcgtttaagtgacgataaatatgt               <  2:860806‑M1/101‑88 (MQ=255)

                                                                                       cgcgcgTAAAGTAAaaataactgagtggttattttagggatgtaagcggtcagttttgcggttgagcggcaaaggcgtcgtttaagtgacgataaatatgt               >  2:2897181‑M1/1‑14 (MQ=255)

                                                                                        gcgcgTAAAGTAAaaataactgagtggttattttagggatgtaagcggtcagttttgcggttgagcggcaaaggcgtcgtttaagtgacgataaatatgtg              >  2:2697064‑M1/1‑13 (MQ=255)

                                                                                         cgcgTAAAGTAAaaataactgagtggttattttagggatgtaagcggtcaggtttgccgttgggcggcaaaggcgtcgtttaagtgacgataaatatgtga             <  2:2393692‑M1/101‑90 (MQ=255)

                                                                                          gcgTAAAGTAAaaataactgagtggttattttagggatgtaagcggtcagttttgcggttgagcggcaaaggcgtcgtttaagtgacgataaatatgtgat            >  2:1984093‑M1/1‑11 (MQ=255)

                                                                                              aaagtaaaaataactgagtggttattttagggatgtaagcggtcagttttgcggttgagcggcaaaggcgtcgtttaagtgacgataaatatgtgattcat        <  1:3286018‑M1/101‑95 (MQ=255)

                                                                                              aaagtaaaaataactgagtggttattttagggatgtaagcggtcagttttgcggttgagcggcaaaggcgtcgtttaagtgacgataaatatgtgattcat        >  1:1512276‑M1/1‑7 (MQ=255)

                                                                                               aagtaaaaataactgagtggttattttagggatgtaagcggtcagttttgcggttgagcggcaaaggcgtcgtttaagtgacgataaatatgtgattcata       <  2:1319893‑M1/101‑96 (MQ=255)

                                                                                                 gtaaaaataactgagtggttattttagggatgtaagcggtcagttttgcggttgagcggcaaaggcgtcgtttaagtgacgataaatatgtgattcatatc     >  2:3796389‑M1/1‑4 (MQ=255)

                                                                                                  taaaaataactgagtggttattttagggatgtaagcggtcagttttgcggttgagcggcaaaggcgtcgtttaagtgacgataaatatgtgattcatatca    <  1:3003637‑M1/101‑99 (MQ=255)

                                                                                                   aaaaataactgagtggttattttagggatgtaagcggtcagttttgcggttgagcggcaaaggcgtcgtttaagtgacgataaatatgtgattcatatcac   <  1:1576121‑M1/101‑100 (MQ=255)

                                                                                                    aaaataactgagtggttattttagggatgtaagcggtcagttttgcggttgagcggcaaaggcgtcgtttaagtgacgataaatatgtgattcatatcaca  >  1:3176622‑M1/1‑1 (MQ=255)

AATAGTTGGCCGAAGCCGTTCTAGGTTTGCGTTGCGTTTGAGGAGGTAAATTGACCGCTATCCTGTAGTGATGTTGCCAGAGTTACGCGCGCGTAAAGTAAGGTAAATAACTGAGTGGTTATTTTAGGGATGTAAGCGGTCAGTTTTGCGGTTGAGCGGCAAAGGCGTCGTTTAAGTGACGATAAATATGTGATTCATATC  >  CP009273/4581121‑4581321

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 26 ≤` `ATCG/ATCG` `< 31 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`