New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP009273	= 47540	32 (0.930)	5 (0.160)	4/300	2.3	15.0%	coding (295/531 nt)	kefF	potassium‑efflux system ancillary protein for KefC, glutathione‑regulated; quinone oxidoreductase, FMN‑dependent
	?	CP009273	= 47670	27 (0.850)					coding (425/531 nt)	kefF	potassium‑efflux system ancillary protein for KefC, glutathione‑regulated; quinone oxidoreductase, FMN‑dependent
Rejected: Frequency below/above cutoff threshold.

ATCATTCCCATGCGAATAAACGGATGCTTGAACAGGCAAGGACGCTGGAAGGCGTCGAAATTCGCTCTCTTTATCAACTCTATCCTGACTTCAATATCGATATTGCCGCCGAGCAGGAGGCGCTGTCTCGCGCCGATCTGATCGTCTGGCAGCATCCGATGCAGTGGTACAGCATTCCTCCGCTCCTCAAACTTTGGATCGATAAAGTTTTCTCCCACGGCTGGGCTT‑‑ACGGTCATGGCGGCAC‑‑‑‑‑‑‑GGCGC‑‑TGCATGGCAAACATTTGCTGTGGGCGGTGACGACCGGCGGCGGGGAAAGCCATTTTGAAATTGGTGCGCATCCGGGCTTTGATGTGCTGTCGCAGCCGCTACAGGCGACGGCAATCTACTGCGGGCTGAACTGGCTGCCACCGTTTGCCATGCACTGCACCTTTATTTGTGACGACGAAACCCTCGAAGGGCAGGCGCGTCACTATAAGCAACGTCTGCTGGAATGGCAGGAGGCCCATCATGGATAGCCATACGCTGATTC  >  CP009273/47280‑47790                                                                                                                                                                                                                                                                                |                                                                                                                                                                                                                                                           atcatTCCCATGCGAATAAACGGATGCTTGAACAGGCAAGGACGCTGGAAGGCGTCGAAATTCGCTCTCTTTATCAACTCTATCCTGACTTCAATATCGATATTGCCGCCGAGCAGGAGGCGCTGTCTCGCGCCGATCTGCTCGTCTGGCAGCATCCGATGCAGTGGTACAGCATTCCTCCGCTCCTCAAACTTTCGATCGATAAAGTTTTCTCCCACGGCTGGGCTT‑‑AAGGTCATGGCGGCAC‑‑‑‑‑‑‑GCCGC‑‑TGAATGGCAAACATTTGCTTTGGGCg                                                                                                                                                                                                                                              >  1:604119/1‑275 (MQ=255) atcatTCCCATGCGAATAAACGGATGCTTGAACAGGCAAGGACGCTGGAAGGCGTCGAAATTCGCTCTCTTTATCAACTCTATCCTGACTTCAATATCGATATTGCCGCCGAGCAGGAGGCGCTGTCTCGCGCCGATCTGATCGTCTGGCAGCATCCGATGCAGTGGTACAGCATTCCTCCGCTCCTCAAACTTTGGATCGGTACAGTTTTCTCCCACGACTGGGCTT‑‑ACGGTAATGGCGGCAC‑‑‑‑‑‑‑GTCGC‑‑TGCATGGCAAACactatctcgtata                                                                                                                                                                                                                                               >  1:39870/1‑262 (MQ=255) atcatTCCCATGCGAATAAACGGATGCTTGAACAGGCAAGGACGCTGGAAGGCGTCGAAATTCGCTCTCTTTATCAACTCTATCCTGACTTCAATATCGATATTGCCGCCGAGCAGGAGGCGCTGTCTCGCGCCGATCTGATCGTCTGGCAGCATCCGATGAAGTTGTACAGCATTCCTCCGCTCCTCAAACTTTGGATCGATAAAGTTTTCTCCAACTGCTGTGCTT‑‑ACGGTCATGGCGGCAC‑‑‑‑‑‑‑GGCGG‑‑TGCATGCCAAACATTTGCTGTTGGCg                                                                                                                                                                                                                                              >  2:250138/1‑275 (MQ=255)                     cGGATGCTTGAACAGGCAAGGACGCTGGAAGGCGTCGAAATTCGCTCTCTTTATCAACTCAATCCTGACTTCAATATCGATATTGCCCCCGAGCAGTAGCCGCTGTCTCGCCCCGATCTGATCGTCTGGCAGCATCCCATGCAGTGGTACAGCATTCCTCCGCTCCTCACAATTCGGATCGCTAAAGTTTACTACCACGGCTGGGCTT‑‑ACGGACATTGCAGCAC‑‑‑‑‑‑‑GCCGC‑‑CCCATGGCCAACAGTTCCTGTGGGGGGTtaccgctcgcgccggg                                                                                                                                                                                                                            >  2:156148/1‑260 (MQ=255)                                    gCAAGGACGCTGGAAGGCGTCGAAATTCGCTCTCTTTATCAACTCTATCCTGACTTCAATATCGATATTGCCGCCGAGCAGGAGGCGCTGTCTCGCGCCGATCTGATCGTCTGGCAGCATCCGATGCAGTGGTACAGCATTCCTCCGCTCCTCAAACTTTGGATCGATAAAGTTTTCTCCCACGCCTGCCCTTCGAGGGTTTCGTCGTCACAAATAAAGGTGCAGTGCATGGCAAACggtggcagccagttcagcccgcagtagattgccgtcgc                                                                                                                                                                                                                      >  1:230537‑M1/1‑237 (MQ=255)                                              tGGAAGGCGTCGAAATTCGCTCTCTTTATCAACTCTATCCTGACTTCAATATCGATATTGCCGCCGAGCAGGAGGCGCTGTCTCGCGCCGATCTGATCGTCTGGCAGCATCCGATGCAGTGGTACAGCATTCCTCCGCTCCTCAAACTTTGGATCGATAAAGTTTTCTCCCACGGCTGGGCTT‑‑ACGGTCATGGCGGCAC‑‑‑‑‑‑‑GGCGC‑‑TGCATGGCAAACATTTGCTGTGGGCGGTGACGACCGGCGGCGGGGAAAGCCATTTTGAAATTGGTGGGCAt                                                                                                                                                                                                 >  1:79281/1‑275 (MQ=255)                                                            tttCGCTTTCTTTATCAACTCTTTCCTGGCTTCAATATCGATATTGCCGCCGTGCAGCAGGCGCTTTCTCGCGCCGATCTGATCGTCTGGCAGCATCAGATGCAGTGGTACAGCATTCCTCCGCTCCTCAACCTTTGGATCGATAAAGTTTTCTCCCACGGCTGTGCTT‑‑ACGGTCATGGCGGCAC‑‑‑‑‑‑‑GGCGC‑‑TGCATGGCAAACATTTGCTGTGGGCGGTGACGACCGGCGGCGGGGAAAGCCATTTTGAAATTGGTGCGCATCCGGGCTTTGAtgt                                                                                                                                                                                   <  1:363579/274‑1 (MQ=255)                                                                    tctTTATCAACTCTATCCTGACTTCAATATCGATATTGCCGCCGAGCAGGAGGCGCTGTCTCGCGCCGATCTGATCGTCTGGCAGCATCCGATGCAGTGGTACAGCATTCCTCCGCTCCTCAAACTTTGGATCGATAAAGTTATCTCCCACGGCTGGGCTT‑‑ACGGTCATGGCGGCAC‑‑‑‑‑‑‑GGAGC‑‑TGCATGGCAAACATTTGCTGTGGGCGGTGACGACCGGCGGCGGGGAAAGCCATTTTGACATTGGTGCGCATCCGGGCTTTGCTGTGCGTTCGc                                                                                                                                                                           >  1:115718/1‑275 (MQ=255)                                                                           cAACTCTATCCTGACTTCAATATCGATATTGCCGCCGAGCAGGAGGCGCTGTCTCGCGCCGATCTGATCGTCTGGCAGCATCCGATGCAGTGGTACAGCATTCCTCCGCTCCTCAACCTTTGGATCGATAAAGTTTTCTCCCACGGCTGGGCTT‑‑ACGGTCATGGCGGCAC‑‑‑‑‑‑‑GGCGC‑‑TGCATGGCAAACATTTGCTGTGGGCGGTGACGACCGGCGGCGGGGAAAGCCATGTTGAAATTGGTGCTCATCCGGGCTTTGCTGTGCTGTCGCAccccc                                                                                                                                                                     >  1:409383/1‑272 (MQ=255)                                                                            aattctATCCTGACTTCAATATCGTCCTGGCCGCCTGGCCGGTGGCGCTGTCTCTCGCCGATCTGATCGTCTGGCTGCATCCGATGCAGTGGTACAGCATTCCTCCGCTCCGCAAACTTTGGATCGATAAAGTTTTCTCCCCCGGCTGGGCTT‑‑ACGGTCATGGCGGCAC‑‑‑‑‑‑‑GGCGC‑‑TGCATGGCAAACATTTGCTGTGGGCGGTGACGACCGGCGGCGGGGAAAGCCATTTTGAAATTGGTGCGCATCCGGGCTTTGATGTGCTGTCGCAGCCGCTa                                                                                                                                                                   <  2:485757/272‑1 (MQ=255)                                                                                ctATCCTGACTTCAATATCGATATTGCCGCCGAGCAGGAGGCGCTGTCTCGCGCCGATCTGATCGTCTGGCAGCATCCGATGCAGTGGTACAGCATTCCTCCGCTCCTCAAACTTTGGATCGATAAAGTTTTCTCCCACGGCTGGGCTT‑‑ACGGTCATGGCGGCAT‑‑‑‑‑‑‑GGCGC‑‑TGCATGGCAAACAtt                                                                                                                                                                                                                                                         >  2:422467/1‑185 (MQ=255)                                                                                    ccTGACTTCAATATTGATATTGCCGCCGAGCAGGAGGCGCTGTCTCGCGCCGATCTGATCGTCTGGCAGCATCCGATGCAGTGGTACAGCATTCCTCCGCTCCTCAAACTTTGGATCGATAAAGTTTTCTCCCACGGCTGGGCTT‑‑ACGGTCATGGCGGCAT‑‑‑‑‑‑‑GGCGC‑‑TGCATGGCAAACATTTGCt                                                                                                                                                                                                                                                     <  1:422471/185‑1 (MQ=255)                                                                                      tGATTTCAATANACATTTTGCCGCCGAGCGGGGGGCGCTGTCTCGCGCCGTTCTGATCGTCTGGCAGCATCCGATGCAGTGGTACAGCATTCCTCCGCTCCTCAAACTGTGGATCGATAAAGTTTTCTCCCACGGCTGGGCTT‑‑ACGGTCATGGCGGCAC‑‑‑‑‑‑‑GGCGC‑‑TGCATGGCAAACATTTGCTGTGGGCGGTGACGACCGGCGGCGGGGAAAGCCATTTTGAAATTGGTGCGCATCCGGGCTTTGATGTGCTGTCGCAGCCGCTACAGGCGACgg                                                                                                                                                         <  2:79280/275‑1 (MQ=255)                                                                                        aCTTCAATATCGATATTGCCGCCGAGCAGGAGGCGCTGTCTCGCGCCGATCTGATCGTCTGGCAGCATCCGATGCAGTGGTACAGCATTCCTCCGCTCCTCAAACTTTGGATCGATAAAGTTTTCTCCCACGGCTGGGCTT‑‑ACGGTCATGGCGGCAC‑‑‑‑‑‑‑GGCGC‑‑TGCCTGGCAAACATTTGCTGTGGGCGGTGACGACCGGCGGCGGGGAAAGCCATTTTGAAATGTGTGCGCAGCCGGGCTTTGATGTGCTGTCGCAGGCGCTCCCGGcctccgcg                                                                                                                                                       >  2:194266/1‑268 (MQ=255)                                                                                                             ccgAGCAGGAGGCGCTGTCTCGCGCCGATCTGATCGTCTGGCAGCATCCGATGCAGTGGTACAGCATTCCTCCGCTCCTCAAACTTTGGATCGATAAAGTTTTCTCCCACGGCTGGGCTT‑‑ACGGTCATGGCGGCAC‑‑‑‑‑‑‑GGCGC‑‑TGCATGGCAAACATTTGCTGTGGGCGGTGACGACCGGCGGCGGGGAAAGCCATTTTGAAATTGGTGCGCATCCGGGCTTTGATGTGCTGTCGAAGCCGCTACAGGGGACGGCAATCTAATGCGGGCGGacatt                                                                                                                                   >  1:181876/1‑270 (MQ=255)                                                                                                                    ggaggCGCTGTCTCGCGCCGATCTGATCGTCTGGCTGCATCCGCTGCAGTGTTACAGCATTCCTCCGCTCCTCGAACTTTGGATCGATAAAGTTTTCTCCCACGGCTGGGCTT‑‑ACGGTCATGGTGGCAC‑‑‑‑‑‑‑GGCGC‑‑TGCATGTCAAACATTTGCTGTGGGCGGTGACGACCGGCGGCGGGGAAAGCCATTTTGAAATTGGTGCGCATCCGGGCTTTGATGTGCTGTCGCAGCCGCTACAGGCGACGGCAATCTACTGCGGGCTGAACTGGCTGCCAc                                                                                                                           <  1:156149/275‑1 (MQ=255)                                                                                                                       ggCGCTGTCTCGCGCCGATCTGATCGTCTGGCAGCATCCGATGCAGTGGTACAGCATTCCTCCGCTCCTCAAACTTTGGATCGATAAAGTTTTCTCCCACGGCTGGGCTT‑‑ACGGTCATGGCGGCAC‑‑‑‑‑‑‑GGCGC‑‑TGCATGGCAAACATTTGCTGTGGGCGGTGACGACCGGCGGCGGGGAAAGCCATTTTGAAATTGGTGCGCATCCGGGCTTTGATGTGCTGTCGCAGCCGCTACAg                                                                                                                                                                >  2:41105/1‑235 (MQ=255)                                                                                                                           cTGTCTCGCGCCGATCTGATCGTCTGGCAGCATCCGATGCAGTGGTACAGCATTCCTCCGCTCCTCAAACTTTGGATCGATAAAGTTTTCTCCCACGGCTGGGCTT‑‑ACGGTCATGGCGGCAC‑‑‑‑‑‑‑GGCGC‑‑TGCATGGCAAACATTTGCTGTGGGCGGTGACGACCGGCGGCGGGGAAAGCCATTTTGAAATTGGTGCGCATCCGGGCTTTGATGTGCTGTCGCAGCCGCTACAGGCGa                                                                                                                                                            <  1:41106/235‑1 (MQ=255)                                                                                                                                 cgcgCCGATCTGATCGTCTGGCAGCATCCGATGCAGTGGTACAGCATTCCTCCGCTCCTCTAACTTTGGATCGATAAAGTTTTCTCCCACGGCTGGGCTT‑‑ACGGTCATGGCGGCAC‑‑‑‑‑‑‑GGCGC‑‑TGCATGGCAAACATTTGCTGTGGGCGGTGACGACCGGCGGCGGGGAAAGCCATTTTGAAATTGGTGCGCATCCGGGCTTTGATGTGCTGTCGCAGCCGCTACAGGCGACg                                                                                                                                                          <  1:429213/231‑1 (MQ=255)                                                                                                                                                               aTGCAGTGGTACAGCATTCCTCCGCTCCTCAAACTTTGGATCGATAAAGTTTTCTCCCACGGCTGGGCTT‑‑ACGGTCATGGCGGCAC‑‑‑‑‑‑‑GGCGC‑‑TGCATGGCAAACATTTGCTGTGGGCGGTGACGACCGGCGGCGGGGAAAGCCATTTTGAAATTGGTgc                                                                                                                                                                                                     >  2:141530/1‑158 (MQ=255)                                                                                                                                                                   aGTGGTACAGCATTCCTCCGCTCCTCAAACTTTGGATCGATAAAGTTTTCTCCCACGGCTGGGCTT‑‑ACGGTCATGGCGGCAC‑‑‑‑‑‑‑GGCGC‑‑TGCATGGCAAACATTTGCTGTGGGCGGTGACGACCGGCGGCGGGGAAAGCCATTTTGAAATTGGTGCGCAt                                                                                                                                                                                                 <  1:141531/158‑1 (MQ=255)                                                                                                                                                                   aGTGGTACAGCATTCCTCCGCTCCTAAAACTTTGCATCGATAAAGTTTTCTCCCACGGCTGGGCTT‑‑ACGGTCATGGCGGCAC‑‑‑‑‑‑‑GGCGC‑‑TGCATGGCAAACggtggcagccagttcagcccgcagtagattgccgtcgcctgtagcggctgcgacagcacatcaaagcccggatgcgcaccaattncaaaatggntttccccgccgccggtcgtcac                                                                                                                                        >  1:468082‑M1/1‑99 (MQ=255)                                                                                                                                                                       gTACAGCAGTCCTCCGCTCCTCAAACTTTGGATCGATAAAGTGTTCTCCCACGGCTGGGCTT‑‑ACGGTCATGGCGGCAC‑‑‑‑‑‑‑GGCGC‑‑GGCATGGCAAACggtggcagccaggtcagcccgcagtagattgccgtcgcctgtagcggctgcgacagcacatcaaagcccggatgcgcaccaatttcaaaatggctttccccgccgccggtcgtcaccgcc                                                                                                                                    <  2:468075‑M1/215‑121 (MQ=255)                                                                                                                                                                               ttCCTCCGCTCCTCAAACTTTGGATCGATAAAGTTTTCTCCCACGGCTGGGCTT‑‑ACGGTCATGGCGGCAC‑‑‑‑‑‑‑GGCGC‑‑TGCATGGCAAACATTTGCTGTGGGCGGTGACGACCGGCGGCGGGGAAAGCCATTTTGAACTTGGTGCGCATCCGGGCTTTGATGTGCTGTCGCAGCCGCTCAAGGCGACGGCAATCTACTGCGGGCTGAACTAGCTGCCACCGTTTGCCCTGCCCTGCACTTTTATTTGTGCCGACGAAATCCTTGAAGTGTAGGcgcg                                                                 >  1:260189/1‑274 (MQ=255)                                                                                                                                                                                  ctccGCTCCTCAAACTTTGGATCGATAAAGTTTTCTCCCACGGCTGGGCTT‑‑ACGGTCATGGCGGCAC‑‑‑‑‑‑‑GGCGC‑‑TGCATGGCAAACATTTGCTGTGGGCGGTGACGACCGGCGGCGGGGAAAGCCATTTTGAAATTGGTGCGCATCCGGGCTTTGATGTGCTGTCGCAGCCGCTACAg                                                                                                                                                                >  1:460811/1‑176 (MQ=255)                                                                                                                                                                                      gCTCCTCAAACTTTGGATCGATAAAGTTTTCTCCCACGGCTGGGCTT‑‑ACGGTCATGGCGGCAC‑‑‑‑‑‑‑GGCGC‑‑TGCATGGCAAACATTTGCTGTGGGCGGTGACGACCGGCGGCGGGGAAAGCCATTTTGAAATTGGTGCGCATCCGGGCTTTGATGTGCTGTCGCAGCCGCTACAGGCGa                                                                                                                                                            <  2:460806/176‑1 (MQ=255)                                                                                                                                                                                                 gttGGAGCGATAAAGGTTTCGCCCACGGCTGGGCGT‑‑ACGGTCATGGCGGCAC‑‑‑‑‑‑‑GGGGC‑‑TGGATGGCAAGCGATTGCTGTGGGCGGTGACGACCGGGGGCGGGGAAAGCCATTTTGAAATTGGTGCGCATCCGGGCTTTGATGTGCTGTCGCAGCCGCTACAGGCGACGGCAATCTACTGCGGGCTGAACTGGCTGCCACCGTTTGCCATGCACTGCACCTTTATTTGTGACGACGAAACCCTCGAAGGGCAGGCGCGTCACTATAAGCAACGTctg                                              <  2:604110/274‑1 (MQ=255)                                                                                                                                                                                                             taGTTTTCTCCGACGGCTGGGCTT‑‑ACGGTACGGGCGGCAG‑‑‑‑‑‑‑GGGGC‑‑TGCATGGCAAACATTTGCTGTGGGCGGTGACGACCGGCGGCAGGGAAAGCCATTTTGAAATTGGTGTGCATCCGGGCATTGATTTTCTGTCGCAGCCGCTACAGGCGACGGCAATCTACTGCGGGCTGAACTGGCTGCCACCGTTTGCCATGCACTGCACCTTTATTTGTGACGACGAAACCCTCGAAGGGCAGGCGCGTCACTATAAGCAACGTCTGCTGCAATGGCag                                  <  1:590282/274‑1 (MQ=255)                                                                                                                                                                                                                  ttCTCCCCCGTCTGGGCTT‑‑AGGGTCATGGCTGCAC‑‑‑‑‑‑‑GGCTC‑‑TGCATGGCAAACATTTGCTGTGGGCGGTGACGACCGGCGGCGGGGAAAGCCATTTTGAAATTGGTGCGCATCCGGGCTTTGCTGTGCTGTCGCAGCCGCTACAGGCGACGGCAATCTACTGCGGGCTGAACTGGCTGCCACCGTTTGCCATGCACTGCACCTTTATTTGTGACGACGAAACCCTCGAAGGGCAGGCGCGTCACTATAAGCAACGTCTGCTGGAATGGCAGGAGGc                             <  1:194268/275‑1 (MQ=255)                                                                                                                                                                                                                          cGGCTGGGCTT‑‑ACGGTCATGGCGGCAC‑‑‑‑‑‑‑GGCGC‑‑TGCATGGCAAACggtggcagccagttcagcccgcagtagattgccgtcgcctgtagcggctgcgacagcacatcaaagcccggatgcgcaccaatttcaaaatggctttccccgccgccggtcgtcac                                                                                                                                        >  2:439123‑M1/1‑44 (MQ=255)                                                                                                                                                                                                                              tGGGCTT‑‑ACGGTCATGGCGGCAC‑‑‑‑‑‑‑GGCGC‑‑TGCATGGCAAACggtggcagccagttcagcccgcagtagattgccgtcgcctgtagcggctgcgacagcacatcaaagcccggatgcgcaccaatttcaaaatggctttccccgccgccggtcgtcaccgcc                                                                                                                                    <  1:439128‑M1/160‑121 (MQ=255)                                                                                                                                                                                                                                         ggTCATGGCGGCAC‑‑‑‑‑‑‑GGCGC‑‑TGCATGGCAAACATTTGCTGTGGGCGGTGACGACCGGCGGCGGGGAAAGCCATTTTg                                                                                                                                                                                                               >  2:286174/1‑76 (MQ=255)                                                                                                                                                                                                                                             aTGGCGGCAC‑‑‑‑‑‑‑GGCGC‑‑TGCATGGCAAACATTTGCTGTGGGCGGTGACGACCGGCGGCGGGGAAAGCCATTTTGAAAt                                                                                                                                                                                                           <  1:286178/76‑1 (MQ=255)                                                                                                                                                                                                                                               ggcggcAC‑‑‑‑‑‑‑GGGTC‑‑TGCATGGCAAACATTTGCTGTGGGCGGTGACGACCGGCGGCGGGGAAAGCCATTTTGAACTTGGTGCGCATCCGGGCTTTGATGTGCTGTCGCAGCCGCTACAGGCGACGGCAATCTACTGCGGGCTGAACTGGCTGCCACCGTTTGCCATGCACTGCACCTTTATTTGTGACGACGAAACCCTCGAAGGGCAGGCGCGTCACTATAAGCAACGTCTGCTGGAATGGCAGGAGGCCCATCATGGATAGCCATACGCTGATTc  <  1:250142/275‑1 (MQ=255)                                                                                                                                                                                                                                                                     tGCATGGCAAACggtggcagccagttcagcccgcagtagattgccgtcgcctgtagcggctgcgacagcacatcaaagcccggatgcgcaccaatttcaaaatggctttccccgccgccggtcgtcaccgcccacagcaaatgtttgc                                                                                                                    <  1:98737‑M1/148‑137 (MQ=255)                                                                                                                                                                                                                                                                     tGCATGGCAAACggtggcagccagttcagcccgcagtagattg                                                                                                                                                                                                                             >  1:178884‑M1/1‑12 (MQ=255)                                                                                                                                                                                                                                                                         tGGCAAACggtggcagccagttcagcccgcagtagattgccgt                                                                                                                                                                                                                         <  2:178882‑M1/43‑36 (MQ=255)                                                                                                                                                                                                                                                                          ggCAAACggtggcagccagttcagcccgcagtagattgccgtcgcctgtagcggctgcgacagcacatcaaagcccggatgcgcaccaatttc                                                                                                                                                                      >  2:358520‑M1/1‑7 (MQ=255)                                                                                                                                                                                                                                                                           gCAAACATTTGCTGTGGGCGGTGACGACCGGCGGCGGGGAAAGCCATTTTGAAATTGGTGCGCATCCGGGCTTTGATGTGCTGTCGCAGCCGCTACAGGCGACGGCAATCTACTGCGGGCTGAACTGGCTGCCACCgtttgccatgca                                                                                                              <  1:98737‑M2/148‑13 (MQ=255)                                                                                                                                                                                                                                                                            cAAACATTTGCTGTGGGCGGTGACGACCGGCGGCGGGGAAAGCCATTTTGAAATTGGTGCGCATCCGGGCTTTGATGTGCTGTCGCAGCCGCTACAGGAGACGACAATCTACTGCGGGc                                                                                                                                          >  1:114693/1‑119 (MQ=255)                                                                                                                                                                                                                                                                              aaCggtggcagccagttcagcccgcagtagattgccgtcgcctgtagcggctgcgacagcacatcaaagcccggatgcgcaccaatttcaaaa                                                                                                                                                                  <  1:358524‑M1/93‑91 (MQ=255)                                                                                                                                                                                                                                                                               aCATTTGCTGTGGGCGGTGACGACCGGCGGCGGGGAAAGCCATTTTGAAATTGGTGCGCATCCGGGCTTTGATGTGCTGTCGCAGCCGCTACAGGCGACGGCAATCTACTGCGGGCTGAACTGGCTGCCACCGTTTGCCAtgcactgc                                                                                                          <  2:98736/148‑1 (MQ=255)                                                                                                                                                                                                                                                                                cATTTGCTGTGGGCGGTGACGACCGGCGGCGGGGAAAGCCATTTTGAAATTGGTGCGCATCCGGGCTTTGATGTGCTGTCGCAGCCGCTACAGGCGACGGCAATCTACTGCGGGCTGaa                                                                                                                                      <  2:114692/119‑1 (MQ=255)                                                                                                                                                                                                                                                                                |                                                                                                                                                                                                                                                           ATCATTCCCATGCGAATAAACGGATGCTTGAACAGGCAAGGACGCTGGAAGGCGTCGAAATTCGCTCTCTTTATCAACTCTATCCTGACTTCAATATCGATATTGCCGCCGAGCAGGAGGCGCTGTCTCGCGCCGATCTGATCGTCTGGCAGCATCCGATGCAGTGGTACAGCATTCCTCCGCTCCTCAAACTTTGGATCGATAAAGTTTTCTCCCACGGCTGGGCTT‑‑ACGGTCATGGCGGCAC‑‑‑‑‑‑‑GGCGC‑‑TGCATGGCAAACATTTGCTGTGGGCGGTGACGACCGGCGGCGGGGAAAGCCATTTTGAAATTGGTGCGCATCCGGGCTTTGATGTGCTGTCGCAGCCGCTACAGGCGACGGCAATCTACTGCGGGCTGAACTGGCTGCCACCGTTTGCCATGCACTGCACCTTTATTTGTGACGACGAAACCCTCGAAGGGCAGGCGCGTCACTATAAGCAACGTCTGCTGGAATGGCAGGAGGCCCATCATGGATAGCCATACGCTGATTC  >  CP009273/47280‑47790

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.