| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| MC JC | CP009273 | 248,669 | Δ14 bp | 100% | coding (178‑191/294 nt) | yafN → | antitoxin of the YafO‑YafN toxin‑antitoxin system |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | CP009273 | 248669 | 248682 | 14 | 50 [0] | [0] 51 | yafN | antitoxin of the YafO‑YafN toxin‑antitoxin system |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | = 248668 | 0 (0.000) | 45 (1.160) | 34/276 | NT | 100% | coding (177/294 nt) | yafN | antitoxin of the YafO‑YafN toxin‑antitoxin system |
| ? | CP009273 | 248683 = | 0 (0.000) | coding (192/294 nt) | yafN | antitoxin of the YafO‑YafN toxin‑antitoxin system | |||||
TATATTCTGGTGTGCATTATTATGAGGGTATCACTGTATGCATCGAATTCTCGCTGAAAAATCGGTCAATATCACTGAGTTACGTAAAAACCCAGCTAAATACTTTATTGATCAACCGGTTGCGGTTCTTTCTAATAATCGCCCCGCAGGATATCTCTTAAGTGCCAGCGCATTCGAAGCGTTAATGGACATGCTTGCTGAACAAGAGGAGAAAAAGCCCATAAAGGCGCGCTTCCGTCCAAGTGCTGCAAGATTAGAGGAAATTACACGCCGCGCTGAACAATATCTTAATGATATGACGGATGATGATTTCAATGACTTTAAGGAATAAGGATGCGGGTATTCAAAACAAAACTTATTCGCCTGCAACTTACAGCAGAGGAACTTGATGCGTTAACGGCGGATTTTATTTCCTATAAGCGTGACGGTGTTTTGCCAGATATATTTGGTCGCGA > CP009273/248455‑248909 | tataTTCTGGTGTGCATTATTATGAGGGTATCACTGTATGCATCGAATTCTCGCTGAAAAATCGGTCAATATCACTGAGTTACGTAAAAACCCAGCTAAATACTTTATTGATCAACCGGTTGCGGTTCTTTCTAATAATCGCCCCGCAGGATATCTCTTAAGTGCCAGCGCATTCGAAGCGTTAATGGACATGCTTGCTGAACAAGAGGAGAAAgcgcttccgtccaagtgctgcaagcttagaggaaattacaagccgctctcaaccatatttt > 2:667487‑M1/1‑214 (MQ=255) atTCTGGTGTGCATTATTATGAGGGTATCACTGTATGCATCGAATTCTCGCTGAAAAATCGGTCAATATCACTGAGTTACGTAAAAACCCAGCTAAATACTTTATTGATCAACCGGTTGCGGTTCTTTCTAATAATCGCCCCGCAGGATATCTCTTAAGTGCCAGCGCATTCGAAGCGTTAATGGACATGCTTGCTGAACAAGAGGAGAAAgcgcttccgtccaagtgctgcaagattagaggaaattacacgccgcgctgaacaatatcttaat > 1:321339‑M1/1‑211 (MQ=255) tCTGGTGTGCATTATTATGAGGGTATCACTGTATGCATCGAATTCTCGCTGAAAAATCGGTCAATATCACTGAGTTACGTAAAAACCCAGCTAAATACTTTATTGATCAACTGGTTGCGGTTCTTGCTAATAATCGCCCCGCAGGATATCTCTTAAGTGCCAGCGCATTCGAAGCGTTAATGGACATGCTTGCTGAACAAGAGGAGAAAgcgcttacgtccaagtgctgcaagattagaggaaataacacgccgcgctgaacaatatcttaatga > 1:63074‑M1/1‑209 (MQ=255) ggTGTGCATTATTATGAGGGTATCACTGTATGCATCGAATTCTCGCTGAAAAATCGGTCAATATCACTGAGTTACGTAAAAACCCAGCTAAATACTTTATTGATCAACCGGTTGCGGTTCTTTCCAATAATCGCCCCGCAGGATATCTCTTAAGTGCCAGCGCATTCGAAGCGTTAATGGACATGCTTGCTGAACAAGAGGAGAAAgcgcttccgtccaagtgctgcaagattagaggaaattacacgccgcgctcaacaatatcttaatgatat < 1:667493‑M1/275‑70 (MQ=255) gtgtGCATTATTATGAGGGTATCACTGTATGCATCGAATTCTCGCTGAAAAATCGGTCAATATCACTGAGTTACGTAAAAACCCAGCTAAATACTTTATTGATCAACCGGTTGCGGTTCTTTCTAATAATCGCCCCGCAGGATATCTCATAAGTGCCAGAGCATTCGAAGCGTTAATGGACACGCATGCTGAAGAAGAGGGGAAAgcgcttacgtccaagtgcggccagataagaggaaattaaacgactcgctgaaaaatttcttaaagctat > 2:41991‑M1/1‑205 (MQ=255) gAGGTTATCACTGTATGCATCGAATTCTCGCTGAAAAATCGGTCAATATNACTGAGTTACGTAAAAACCCAGCTAAATACTTTATTGATCAACCGGTTGCGGTTCTTTCTAATAATCGCCCCGCAGGATATCTCTTAAGTGCCAGCGCATTCGAAGCGTTAATGGACATGCTTGCTGAACAAGAGGAGAAAgcgcttccgtccatgtgctgaaagattagaggaaattacacg < 1:572245‑M1/233‑43 (MQ=255) aTCACTGTATGCATCGAATTCTCGCTGAGAAATCGGTCAATATCACTGAGTTACGTAAAAACCCAGCTAAATACTTTATTGATCAACCGGTTGCGGTTCTTTCTAATAATCGCCCCGCAGGATATCTCTTAAGTGCCAGCGCATTCGAAGCGTTAATGGACATGCTTGCTGAACAAGAGGAGANAgcgcttccgtccaagtgctgcaagattagaggaaattacacgccgcgctgaacaatatcttaatgatatgacggatgatgatttaaatga > 1:618021‑M1/1‑185 (MQ=255) tATGCATCGAATTCTCGCTGAAAAATCGGTCAATATCACTGAGTTACGTAAAAACCCAGCTAAATACTTTATTGATCAACCGGTTGCGGTTCTTTCTAATAATCGCCCCGCAGGATATCTCTTAAGTGCCAGCGCATTCGAAGCGTTAATGGACATGCTTGCTGAACAAGAGGAGAAAgcgcttccgtccaagtgctgcaagattagaggacattacacgccgcgctgaacaatatcttaatgatatgacggatgatgatttcaatgactttaag > 1:132401‑M1/1‑178 (MQ=255) cGAATTCTCGCTGAAAAATCGGTCAATATCACTGAGTTACGTAAAAACCCAGCTAAATACTTTATTGATCAACCGGTTGCGGTTCTTTCTAATAATCGCCCCGCAGGATATCTCTTAAGTGCCAGCGCATTCGAAGCGTTAATGGACATGCTTGCTGAACAAGAGGAGAAAgc > 1:276529‑M1/1‑171 (MQ=255) aaTTCTCGCTGAAAAATCGGTCAATATCACTGAGTTACGTAAAAACCCAGCTAAATACTTTATTGATCAACCGGTTGCGGTTCTTTCTAATAATCGCCCCGCAGGATATCTCTTAAGTGCCAGCGCATTCGAAGCGTTAATGGACATGCTTGCTGAACAAGAGGAGAAAgcgcttccgtccaagtgctgcaagattagaggaaattacacgccgcg < 1:309545‑M1/216‑48 (MQ=255) cGCTGAAAAATCGGTCAATATCACTGAGTTACGTAAAAACCCAGCTAAATACTTTATTGATCAACCGGTTGCGGTTCTTTCTAATAATCGCCCCGCAGGATATCTCTTAAGTGCCAGCGCATTCGAAGCGTTAATGGACATGCTTGCTGAACAAGAGGAGAAAgcgcttccgtccaagtgctgcaagattagaggaaattacacgccgcgctgaacaatatcttaatgatatgacggatgatgatttcaatgactttaaggaataaggatgcgg > 1:454547‑M1/1‑163 (MQ=255) caaaaaCAAGATAANTTCTTTATTGATCAACCGGTTGCCGTTCTTTCTAATAATCGCCCCGCAGGATATCTCTTAAGTGCCAGCGCATTCGAAGCGTTAATGGACATGCTTGCTGAACAAGAGGAGAAAgcgcttccgtccaagtgctgcaagattagaggaaattacacgccgcgctgaacaatatcttaatgatatgacggatgatgatttcaatgactttaaggaataaggatgcgggtattcaaaacaaaacttattcgcctgcaacttac < 2:618015‑M1/274‑147 (MQ=255) aGCTAAATACTTTATTGATCAACCGGTTGCGGTTCTTTCTAATAATCGCCCCGCAGGATATCTCTTAAGTGCCAGCGCATTCGAAGCGTTAATGGACATGCTTGCTGAACAAGAGGAGAAAgcgcttccgtccaagtgctgcaagattagaggaaattacacgccgcgctgaacaatatcttaatgatatgacggatgatgatttcaatgac > 1:698483‑M1/1‑121 (MQ=255) aGCTAAATACTTTATTGATCAACCGGTTGCGGTTCTTTCTAATAATCGCCCCGCAGGATATCTCTTAAGTGCCAGCGCATTCGAAGCGTTAATGGACATGCTTGCTGAACAAGAGGAGAAAgcgcttccgtccaagtgctgcaagattagaggaaattacacgc > 2:187273‑M1/1‑121 (MQ=255) aaaTACTTTATTGATCAACCGGTTGCGGTTCTTTCTAATAATCGCCCCGCAGGATATCTCTTAAGTGCCAGCGCATTCGAAGCGTTAATGGACATGCTTGCTGAACAAGAGGAGAAAgcgcttccgtccaagtgctgcaagattagaggaaattacacgccgcgctgaacaatatcttaatgatatgacggatgatgatttcaatgacttta < 2:698477‑M1/212‑96 (MQ=255) aaaTACTTTATTGATCAACCGGTTGCGGTTCTTTCTAATAATCGCCCCGCAGGATATCTCTTAAGTGCCAGCGCATTCGAAGCGTTAATGGACATGCTTGCTGAACAAGAGGAGAAAgcgcttccgtccaagtgctgcaagattagaggaaattacacgccgcg < 1:187276‑M1/164‑48 (MQ=255) cAACCGGTTGCGGTTCTTTCTAATAATCGCCCCGCAGGATATCTCTTAAGTGCCAGCGCATTCGAAGCGTTAATGGACATGCTTGCTGAACAAGAGGAGAAAgcgcttccgtccaagtgctgcaagattagaggaaatta > 1:126041‑M1/1‑102 (MQ=255) cAACCGGTTGCGGTTCTTTCTAATAATCGCCCCGCAGGATATCTCTTAAGTGCCAGCGCATTCGAAGCGTTAATGGACATGCTTGCTGAACAAGAGGAGAAAgcgcttccgtccaagtgctgcaaga > 1:130901‑M1/1‑102 (MQ=255) ccGGTTGCGGTTCTTTCTAATAATCGCCCCGCAGGATATCTCTTAAGTGCCAGCGCATTCGAAGCGTTAATGGACATGCTTGCTGAACAAGAGGAGAAAgcgcttccgtccaagtgctgcaagattagaggaaattacacgccgcgctgaacaatatcttaatgatatgacggatgatgatttcaatgactttaagg > 1:316252‑M1/1‑99 (MQ=255) ccGGTTGCGGTTCTTTCTAATAATCGCCCCGCAGGATATCTCTTAAGTGCCAGCGCATTCGAAGCGTTAATGGACATGCTTGCTGAACAAGAGGAGAAAgcgcttccgtccaagtgctgcaagat > 1:406644‑M1/1‑99 (MQ=255) cGGTTGCGGTTCTTTCTAATAATCGCCCCGCAGGATATCTCTTAAGTGCCAGCGCATTCGAAGCGTTAATGGACATGCTTGCTGAACAAGAGGAGAAAgcgcttccgtccaagtgctgcaagattagaggaaattacacg < 2:126040‑M1/140‑43 (MQ=255) cGGTTGCGGTTCTTTCTAATAATCGCCCCGCAGGATATCTCTTAAGTGCCAGCGCATTCGAAGCGTTAATGGACATGCTTGCTGAACAAGAGGAGAAAgcgcttccgtccaagtgctgcaagattag < 2:130900‑M1/127‑30 (MQ=255) ggTTGCGGTTCTTTCTAATAATCGCCCCGCAGGATATCTCTTAAGTGCCAGCGCATTCGAAGCGTTAATGGACATGCTTGCTGAACAAGAGGAGAAAgcgcttccgtccaagtgctgcaagattagaggaaattacacgccgcgctgaacaatatcttaatgatatgacggatgatgatttcaatgactttaaggaataaggatgcgggtattcaaaacaaaacttattctcctacaacttacaacagatgaacatgaagcgttaaaggcggata > 1:204092‑M1/1‑97 (MQ=255) ttGCGGTTCTTTCTAATAATCGCCCCGCAGGATATCTCTTAAGTGCCAGCGCATTCGAAGCGTTAATGGACATGCTTGCTGAACAAGAGGAGAAAgcgcttccgtccaagtgctgcaagattagaggaaattacacgccgcgctgaacaatatcttaatgatatgacggatgatgatttcaatgactttaaggaata < 2:316249‑M1/197‑103 (MQ=255) ttGCGGTTCTTTCTAATAATCGCCCCGCAGGATATCTCTTAAGTGCCAGCGCATTCGAAGCGTTAATGGACATGCTTGCTGAACAAGAGGAGAAAgcgcttccgtccaagtgctgcaagattaga < 2:406641‑M1/125‑31 (MQ=255) aaGTGCCAGCGCATTCGAAGCGTTAATGGACATGCTTGCTGAACAAGAGGAGAAAgcgcttccgtccaagtgctgcaagattagaggaaattacacgccgcgctgaacaatatcttaatgatatgacggattatgatttcaatgactttaaggaataaggatgcgggtattcaaaacaaaacttattcgcctgcaacttaaagcagaggaacttgatgcgttaacggcggcttttatttcctataagcgggacggtgttttgtccgttatttgtt > 2:808780‑M1/1‑55 (MQ=255) aaGTGCCAGCGCATTCGAAGCGTTAATGGACATGCTTGCTGAACAAGAGGAGAAAgcgcttccgtccaagtgctgcaagattagaggaaattacacgccgcgctgaacaatatcttaatgatatgacggatgatgatttcaatgactttaaggaataaggatgcgggtattcaaaacaaaacttattcgcctgcaacttacagcagaggaacttgatgcgttaacggcggattttatttccaataaggtggacggtgttttgccagatatattt > 2:201369‑M1/1‑55 (MQ=255) aaGTGCCAGCGCATTCGAAGCGTTAATGGACATGCTTGCTGAACAAGAGGAGAAAgcgcttccgtccaagtgctgcaagattagaggaaattacacgccgcgctgaacaatatcttaatgatatgacggatgatgatttcaatgactttaaggaataaggatgcgggtattcaaaacaaaacttattcgcctgcaacttacagcagaggaacttgatgcgttaacggcggat > 1:232890‑M1/1‑55 (MQ=255) gCCAGCGCATTCGAAGCGTTAATGGACATGCTTGCTGAACAAGAGGAGAAAgcgcttccgtccaagtgctgcaagattagaggaaattacacgccgcgctgaacaatatcttaatgatatgacggatgatgatttcaatgactttaaggaataaggatgcgggtattcaaaacaaaacttattcgcctgcaacttacagcagaggaacttgatgcgttaacggcggattttatttcctataagcgtgacggtgttttgcc < 1:201372‑M1/260‑210 (MQ=255) gCCAGCGCATTCGAAGCGTTAATGGACATGCTTGCTGAACAAGAGGAGAAAgcgcttccgtccaagtgctgcaagattagaggaaattacacgccgcgctgaacaatatcttaatgatatgacggatgatgatttcaatgactttaaggaataaggatgcgggtattcaaaacaaaacttattcgcctgcaacttacagcagaggaacttgatgcgttaacggcggatttta < 2:232887‑M1/232‑182 (MQ=255) ccAGCGCATTCGAAGCGTTAATGGACATGCTTGCTGAACAAGAGGAGAAAgcgcttccgtccaagtgctgcaagattagaggaaattacacgccgcgctgaacaatatcttaatgatatgacggatgatgatttcaatgactttaaggaataaggatgcggg > 1:410507‑M1/1‑50 (MQ=255) ccAGCGCATTCGAAGCGTTAATGGACATGCTTGCTGAACAAGAGGAGAAAgcgcttccgtccaagtgctgcaagattagaggaaattacacgccgcgctgaacaatatcttaa > 2:227131‑M1/1‑50 (MQ=255) cAGCGCATTCGAAGCGTTAATGGACATGCTTGCTGAACAAGAGGAGAAAgcgcttccgtccaagtgctgcaagattagaggaaattacacgccgcgctgaacaatatcttaatgatatgacggatgatgatttcaatgactttaaggaataaggatgcgggtattcaaaacaaaacttattcgcctgcaacttacagcagaggaac > 1:314988‑M1/1‑49 (MQ=255) cgcATTCGAAGCGTTAATGGACATGCTTGCTGAACAAGAGGAGAAAgcgcttccgtccaagtgctgcaagattagaggaaattacacgccgcgctgaacaatatcttaatgatatgacggatgatgatttcaatgactttaaggaataaggatgcgggtatt < 2:410504‑M1/162‑117 (MQ=255) cgcATTCGAAGCGTTAATGGACATGCTTGCTGAACAAGAGGAGAAAgcgcttccgtccaagtgctgcaagattagaggaaattacacgccgcgctgaacaatatcttaatgat < 1:227134‑M1/113‑68 (MQ=255) gcATTCGAAGCGTTAATGGACATGCTTGCTGAACAAGAGGAGAAAgcgcttccgtccaagtgctgcaagattagaggaaattacacgccgcgctgaacaatatcttaatgatatgacggatgatgatttcaatgactttaaggaataaggatgcgggtattcaaaacaaaacttattcgcctgcaacttacagcagaggaacttga < 2:314985‑M1/206‑162 (MQ=255) gcATTAGAAGAGTTAATGGACATGCTTGCTGAACGAGAGGAGAAAgcgctttcgtccaagtgctgcaagattagaggaaattacacgccgcgctgaacaatatcttaatgatatgacggatgatgatttcaatgactttaaggaataaggatgcgggtattcaaaacaaaacttattcgcctgcaacttacagcagaggaacttgatgcgttaacggcggattttatttcctataagcgtgacggtgttttgccagatatatttggtcgcgatg < 2:204089‑M1/274‑230 (MQ=255) ttCGAAGCGTTAATGGACATGCTTGCTGAACAAGAGGAGaaa > 2:710534/1‑42 (MQ=255) ttCGAAGCGTTAATGGACATGCTTGCTGAACAAGAGGAGAAAgcgcttccgtccaagtgctgcaagattagaggaaattacacgccgcgctgaacaat > 1:796176‑M1/1‑42 (MQ=255) aaGCGTTAATGGACATGCTTGCTGAACAAGAGGAGAAAgcgcttccgtccaagtgctgcaagattagaggaaattacacgccgcgctgaacaatatct < 2:796170‑M1/98‑61 (MQ=255) aaGCGTTAATGGACATGCTTGCTGAACAAGAGGAGAAAgcgc < 1:710540‑M1/42‑5 (MQ=255) gTTTATAGANATGATTGCTGACCAAGAGTGGAAAgagcttccgtccaagtgcttcaagattagaggaaattacacgccgcgctgaacaatatcttaatgatatgacggatgatgatttcaatgactttaaggaataaggatgcgggtattcaaaacaaaacttattcgcctgcaacttacagcagaggagcttgatgcgttaacggcggattttatttcctataagcgtgacggtgttttgccagatatatttggtcgcgatgcactctacgacg < 2:321336‑M1/275‑242 (MQ=255) tgcttgctGAACAAGAGGAGAAAgcgcttccgtccaagtgctgcaagattagaggaaattacacgc > 1:106285‑M1/1‑23 (MQ=255) tgctGAACAAGAGGAGAAAgcgcttccgtccaagtgctgcaagattagaggaaattacacgccgcg < 2:106285‑M1/66‑48 (MQ=255) aaCAAGAGGAGAAAgcgcttccgtccaagtgctgcaagattagaggaaattacacgccgcgctgaacaatatcttaatgatatgacggatgatgatttcaatgactttaaggaataaggatgcgggtattcaaaacaaaacttattcg > 2:472712‑M1/1‑14 (MQ=255) aaCAAGAGGAGAAAgcgcttccgtccaagtgctgcaagattagaggaaattacacgccgcgctgaacaatatcttaatgatatgacggatgatgatttcaatgac > 1:204936‑M1/1‑14 (MQ=255) agagGAGAAAgcgcttccgtccaagtgctgcaagattagaggaaattacacgccgcgctgaacaatatcttaatgatatgacggatgatgatttcaatgacttta < 2:204933‑M1/105‑96 (MQ=255) agagGAGAAAgagcttccgtccaagtgctgcaagattagaggaaattacacgccgcgctgaacaatatcttaatgatatgacggatgatgatttcaatgactttaaggaataaggatgcgggtattcaaaacaaaacttattcgcctg < 1:472715‑M1/148‑139 (MQ=255) gaAAgcgcttccgtccaagtgctgcaagattagaggaaattacacgc > 2:301538‑M1/1‑4 (MQ=255) gaAAgcgcttccgtccaagtgctgcaagattagaggaaattacac > 2:623228‑M1/1‑4 (MQ=255) | TATATTCTGGTGTGCATTATTATGAGGGTATCACTGTATGCATCGAATTCTCGCTGAAAAATCGGTCAATATCACTGAGTTACGTAAAAACCCAGCTAAATACTTTATTGATCAACCGGTTGCGGTTCTTTCTAATAATCGCCCCGCAGGATATCTCTTAAGTGCCAGCGCATTCGAAGCGTTAATGGACATGCTTGCTGAACAAGAGGAGAAAAAGCCCATAAAGGCGCGCTTCCGTCCAAGTGCTGCAAGATTAGAGGAAATTACACGCCGCGCTGAACAATATCTTAATGATATGACGGATGATGATTTCAATGACTTTAAGGAATAAGGATGCGGGTATTCAAAACAAAACTTATTCGCCTGCAACTTACAGCAGAGGAACTTGATGCGTTAACGGCGGATTTTATTTCCTATAAGCGTGACGGTGTTTTGCCAGATATATTTGGTCGCGA > CP009273/248455‑248909 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |