New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP009273	360104 =	11 (0.470)	20 (0.860)	19/296	NT	54.1%	intergenic (‑38/+557)	lacZ/lacI	pseudogene, truncated/DNA‑binding transcriptional repressor
	?	CP009273	= 360286	23 (0.990)					intergenic (‑220/+375)	lacZ/lacI	pseudogene, truncated/DNA‑binding transcriptional repressor

CTTCACCGCTTGCCAGCGGCTTACCATCCAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGACCAGGCTTTCCACGCCCGCGTGCCGCTCCATGTCGTTCGCGCGGTTCTCGGAAACGCGCTGCCGCGTTTCGTGATTGTCACGCTCAAGCCCGTAGTCCCGTTCGAGCGTCGCGCAGAGGTCAGCGAGGGCGCGGTAGGCCCGATACGGCTCATGGATGGTGT  >  CP009273/360012‑360527                                                                                                                                                                                                                                                                                   |                                                                                                                                                                                                                                                  cTTCACCGCTTGCCAGCGGCTTACCATCCAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCCCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGACTTGTCCTACTCCGGCGAGCGTTCACCGACAAACACCAGATAAAACGAAAGGCCCAGACTTTCGACTGCGCCTATCGTTTAATTTGATGCCTGgggactt                                                                                                                                                                                                                                                   >  2:436726/1‑275 (MQ=21)                                cgcCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCAGGAGAGGGTTCACCGACAAAAAACAGATAAAACGAAAGGCCCAGTCTTTCGACTAAGCCTTTCGGCTTTTTTGATGCCTGGGGAATTaattcctggcagtttatggcgggcgtcctg                                                                                                                                                                                                                     <  1:65227‑M2/274‑31 (MQ=255)                                ccacaccacncaGGGCCGGGTCTCCGTGGATACGCTTGCAAACATGACAATGCCGTTCCCCAATTCCTGTCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTaattcctggcagtttatggcgggcgtcct                                                                                                                                                                                                                      >  2:65227‑M2/4‑244 (MQ=255)                                                    tttcgactggtcctttcgttttatttgatgcctggggaattAATTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCNTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACTAAAGGGCCTCGTGATACGCCTATTTTta                                                                                                                                                                                                  >  1:376882‑M1/42‑273 (MQ=255)                                                            gagcctttcgttttatttgatgcctggggaattAATTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGCTTTGTCCTACTCAGGAGAGCGTTCAACGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGAATGAGCCTTTCGTTTTATTTGATGCCTGTGGAAATGTGAATTAATTCTTGAAGACGAAAGGGCCTAGTGATACGCCTATTTTTATAGGTTAAt                                                                                                                                                                                         <  1:67836‑M1/241‑1 (MQ=255)                                                                                                    ggCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTATTTCGACTGAACCTTTCGTTTTATTTGATGACTGGGGAATTGGGAATAAATTCTTGAAGACGAAAGGGACTCCTGATACGCCTATTTTTATAGGTTAATGTAAAGGGAAGATGCAGCCGACCAGGATTTCCACCACcgcg                                                                                                                                                >  1:232609/1‑275 (MQ=18)                                                                                                                                     tCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTaattcctggcagtttattgcgggcttcctgcccgtcaccctccgggccgttgcttcgcaaacttcaaatccgctcccggcggctttgtcctcctcaggagagcgttcaccgacaaacaacacacaacacaca                                                                                                               <  1:266854‑M2/275‑133 (MQ=255)                                                                                                                                         ggCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCTAGTCTTTCGAATGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGCCCAGGCTTTCCACGCCCGCGTGCCGCTCCATGTCGTTCGCGCGCCNCTCGGATAcgt                                                                                                           >  2:64539/1‑274 (MQ=255)                                                                                                                                              ttGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGACCAGGCTTTCCACGCCCGCGTGcc                                                                                                                                            >  2:98726/1‑237 (MQ=255)                                                                                                                                              ttGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGACCAGGCTTTCCACGCCCGCGTGcc                                                                                                                                            <  1:98727/237‑1 (MQ=255)                                                                                                                                               tGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTaattcctggcagtttatggcgggcgtccttcccgccaccctccgtgcccttgcttcgcaaagttcaaatccgcaccccgcggatttgtccaactcaggaaactgttcaacgaccaacaacaactaaantcaaagacccaatc                                                                                                     <  2:376870‑M2/275‑143 (MQ=255)                                                                                                                                               tGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTaatt                                                                                                                                                                                                                                               <  1:67623‑M2/137‑5 (MQ=255)                                                                                                                                               tGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCa                                                                                                                                                                                     >  2:140192/1‑195 (MQ=255)                                                                                                                                               tGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATGTTTATAGGTTAATGTCATGGGAAGATCCAGCCGACCAGGCTTTCCACGCCAGCGTGCCGCTCCATGTCGtt                                                                                                                               >  1:267955/1‑249 (MQ=255)                                                                                                                                                   tCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATggg                                                                                                                                                                                 <  1:140194/195‑1 (MQ=255)                                                                                                                                                   tCGCAACGTTCAAATCCGCTCACGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTaattcctg                                                                                                                                                                                                                                           >  2:67623‑M2/1‑129 (MQ=255)                                                                                                                                                              acatgctctcccggcGTATTTTTCCTACTCAGGCGGGCGTTCACCGAAAAAGAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGGGCCTTTCGTTTTATTTGATGCCTGGGGAATTaattcctggcagtttatggcgggcgtcctgcccgccaccctccgggccgttgcttcgcaacgttcaaatccgctcccggcggatttgtcctactcaggagagcgttcaccgaccaacaacagataaaacgaaaggcccagtctttcgactgagcctt                                                                                      >  1:98615‑M2/8‑118 (MQ=255)                                                                                                                                                                     cTCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGACGACCAGGCTTTCCACGCCCGCGTGCCGCTCCATGTCCTTCACGCGATTCTCCGAAACACGCTGCCGCGTTTCGTGATTCTCCCGCt                                                                                >  1:167990/1‑274 (MQ=255)                                                                                                                                                                                             agcttgCGTTCACAGAAAATAAAAAGATAAAACGAAATGCCCAGTCTTGCGTATGAGTTTTTCGTTGTATTTGATGCCTTGGTAATGGTGAATTAATGCTTGAAGCCGACAGGGCCTCGTGCTACGCATATTTTTATAGTTTAATTTCATGGGAAGATCAAGCCGACCAGGCTTTCCACGCCCGCGTGCCGCTCCATGTCGTTCGCGCGGTTCTCGGAAACGCGCTGCCGCGTTTCGTGATTGTCACGCTCAAGCCCGTAGTCCCGTTCGAGCg                                                        <  1:435449/269‑1 (MQ=255)                                                                                                                                                                                              gagaGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTaattcctggcagtttatggcggg                                                                                                                                                                                                                            <  1:411098‑M2/109‑24 (MQ=255)                                                                                                                                                                                                  gCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTaattcctggcagtttatggcgggcgtc                                                                                                                                                                                                                        >  2:411083‑M2/1‑82 (MQ=255)                                                                                                                                                                                                   cGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTaattcctggcagtttatggcgggcgtcctgcccgccaccctccgggccgttgcttcgcaacgttcaaatccgctcccggcgga                                                                                                                                                                <  2:11440‑M2/164‑84 (MQ=255)                                                                                                                                                                                                   cGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGAc                                                                                                                                                                   >  1:283124/1‑161 (MQ=255)                                                                                                                                                                                                       cACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTaattcctggcagtttatggcgggcgtcctgcccgccaccctccgggccgttgcttcgcaacgttcaaatccgctcccggcggatttg                                                                                                                                                            >  1:11440‑M2/1‑77 (MQ=255)                                                                                                                                                                                                       cACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGACCAgg                                                                                                                                                               <  2:283113/161‑1 (MQ=255)                                                                                                                                                                                                             caaactaCAGATAAAACTCAATGCCCAGTCTTTCGACTGGGCCTTTCGTTTTATTTGATGCCTGGGGAATTGTGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTNTTATATGTTAATGTCATGGGAAGATCCAGCCGACCAGGCTTTCCACGCCCGCGTGCCGCTCCATGTCGTTCGCGCGGTTCTCGGAAACGCGCTGCCGCGTTTCGTGATTGTCACGCTCAAGCCCGTAGTCCCGTTCGAGCGTCGCGCAGAGGTCAGCg                                       <  1:439592/275‑1 (MQ=255)                                                                                                                                                                                                             caaacaaCAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGACCAGGCTTTCCACGCCCGCGTGCCGCTCCATGTCGTTCGCGCGGTTCTCGGAAACGCGCTGCCGCGTTTCGGTATTGGCCAGCTCAAGCCCGGAGGCCCGGTTGGGCGGCGCGCCGCGGTCaagg                                       >  2:439576/1‑272 (MQ=38)                                                                                                                                                                                                                        tAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGACCAGGCTTTCCACGCCCGCGTGCCGCTCCATGTCTTTCGCGCGGTTCTCGGAAACGCGCTGCCGCGTTTCGTGCTTGt                                                                                      >  1:8229/1‑217 (MQ=255)                                                                                                                                                                                                                            ccGAAAGGCCCAGTCTTTCGACTGAGCGTTTAGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGACCAGGCTTTCCACGCCCGCGTGCCGCTCCATGTCGTTCGCGCGGTTCTCGGAAACGCGCTGCCGCGTTTCGTGATTGTCACg                                                                                  <  2:8229/216‑1 (MQ=255)                                                                                                                                                                                                                            aCGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGACCAGGCTTTCCAc                                                                                                                                                       >  1:194132/1‑148 (MQ=255)                                                                                                                                                                                                                               aaaGTCCCAGTCTTTCGACTGAGCCTGTCGTTTTATTTGATGCCTGGGGAATTaattcctggcagtttatggcgggcgtcctgcccgccaccctccgggccgttgcttcgcaacgttcaaatccgctcccggcggatttgtcc                                                                                                                                                         <  1:341317‑M2/143‑91 (MQ=255)                                                                                                                                                                                                                                aaGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGACCAGGCTTTCCACGccc                                                                                                                                                   <  2:194125/148‑1 (MQ=255)                                                                                                                                                                                                                                   tcccaGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTaattcctggcagtttatggcgggcgtcctgcccgccaccctccgggccgttgcttcgcaacgttcaaatccgctcccggcggatttgtcctact                                                                                                                                                     >  2:341305‑M2/2‑49 (MQ=255)                                                                                                                                                                                                                                      cAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTaattcctggcagtttatgg                                                                                                                                                                                                                                <  1:91948‑M2/65‑20 (MQ=255)                                                                                                                                                                                                                                          cTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTaattcctggcagtttatggcggg                                                                                                                                                                                                                            >  2:91947‑M2/1‑42 (MQ=255)                                                                                                                                                                                                                                           tttCGACTGGTCCTTTCGTTTTATTTGATGCCTGGGGAATTaattcctggcagtttatggcgggcgtcctgcccgccaccctccgggccnttgcttcgcaacgttcaaatccgctcccggcggatttgtcctactcaggagagcgttcaccgacaaacaacagataaaacgaaaggcccagtctttcgactgagcctttcgttttatttgatgcctggggaattgggaattaattcttgaagactaaagggcctcgtgatacgcctattttta           >  1:376882‑M2/1‑41 (MQ=255)                                                                                                                                                                                                                                                   gAGCCTTTCGTTTTATTTGATGCCTGGGGAATTaattcctggcagtttatggcgggcgtcctgcccgccaccctccgggccgttgcttcgcaacgttcaaatccgctcccggcggctttgtcctactcaggagagcgttcaacgacaaacaacagataaaacgaaaggcccagtctttcgaatgagcctttcgttttatttgatgcctgtggaaatgtgaattaattcttgaagacgaaagggcctagtgatacgcctatttttataggttaat  <  1:67836‑M2/274‑242 (MQ=255)                                                                                                                                                                                                                                                   gAGCCTTTCGTTTTATTTGATGCCTGGGGAATTaattcctggcagtttatggcgggcgtcctgcccgccaccctccgggccgttgcttcgcaacgttcaaatccgctcccggcggatttgtcctactcaggagagc                                                                                                                                            <  2:8371‑M2/136‑104 (MQ=255)                                                                                                                                                                                                                                                   gAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATTTCATGGGAAGATCCAGCCGACCAGGCTTTCCACGCCCGCGTGCCGCTCCATGTCGtt                                                                                                                               >  2:214920/1‑149 (MQ=255)                                                                                                                                                                                                                                                       cTTTCGTTTTATTTGATGCCTGGGGAATTaattcctggcagtttatggcgggcgtcctgcccgccaccctccgggccgttgcttcgcaacgttcaaatccgctcccggcggatttgtcctactcaggagagcgttc                                                                                                                                        >  1:8371‑M2/1‑29 (MQ=255)                                                                                                                                                                                                                                                       cTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATTTCATGGGAAGATCCAGCCGACCAGGCTTTCCACGCCCGCGTGCCGCTCCATGTCGTTcgcg                                                                                                                           <  1:214929/149‑1 (MQ=255)                                                                                                                                                                                                                                                         ttCGTTTTATTTGATGCCTGGGGAATTaattcctggcagtttatggcgggcgtcctgccc                                                                                                                                                                                                                  <  2:143416‑M2/60‑34 (MQ=255)                                                                                                                                                                                                                                                         ttCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGACCAGGCTTTCCACGCCCGCGTGCCGCTCCATGTCGTTCGCGCGGTTCTCGGAAACGCGCTGCCGCGTTTCGTGATTGTCACGc                                                                                 >  1:295614/1‑189 (MQ=255)                                                                                                                                                                                                                                                             ttttATTTGATGCCTGGGGAATTaattcctggcagtttatggcgggcgtcctgcccgcca                                                                                                                                                                                                              >  1:143418‑M2/1‑23 (MQ=255)                                                                                                                                                                                                                                                             ttttATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGACCAGGCTTTCCACGCCCGCGTGCCGCTCCATGTCGTTCGCGCGGTTCTCGGAAACGCGCTGCCGCGTTTCGTGATTGTCACGCTCaa                                                                             <  2:295603/189‑1 (MQ=255)                                                                                                                                                                                                                                                                   ttGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGACCAgg                                                                                                                                                               >  2:385212/1‑101 (MQ=255)                                                                                                                                                                                                                                                                       tGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGACCCGGCttt                                                                                                                                                           <  1:385226/101‑1 (MQ=255)                                                                                                                                                                                                                                                                                   |                                                                                                                                                                                                                                                  CTTCACCGCTTGCCAGCGGCTTACCATCCAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGACCAGGCTTTCCACGCCCGCGTGCCGCTCCATGTCGTTCGCGCGGTTCTCGGAAACGCGCTGCCGCGTTTCGTGATTGTCACGCTCAAGCCCGTAGTCCCGTTCGAGCGTCGCGCAGAGGTCAGCGAGGGCGCGGTAGGCCCGATACGGCTCATGGATGGTGT  >  CP009273/360012‑360527

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.