New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP009273	4368615 =	16 (0.920)	4 (0.250)	3/284	NT	20.5%	coding (147/1134 nt)	ampC	penicillin‑binding protein; beta‑lactamase, intrinsically weak
	?	CP009273	4368733 =	16 (0.990)					coding (29/1134 nt)	ampC	penicillin‑binding protein; beta‑lactamase, intrinsically weak

TATAGAGCAACAAAAGATCCCGGGTATGGCGGTGGCGGTAATT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  CP009273/4368657‑4368615 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcggtaattAATAAGGCGCAGAGCGTCGTTTTGAACATAGGGTCTGGTTT  >  CP009273/4368733‑4368773                                                                                      TATAGTGAAAAAAAAGATCACGGGTATGGCGGTGGCGGTAATTAATAAGGCGCAGAGCGT                          >  2:122764/1‑60 TATAGAGCAACAAAAGATCCCGGGTATGGCGGTGGCGGTAATTAATAAGGCGCAGAGCGTCGTTTTGAACATAGGGTCTG      >  2:203553/1‑80     GAGCAACAAAAGATCCCGGGTATGGCGGTGGCGGTAATTAATAAGGCGCAGAGTGTCGTT                      <  1:122766/60‑1     GAGCAACAAAAGATCCCGGGTATGGCGGTGGCGGTAATTAATAAGGCGCAGAGCGTCGTTTTGAACATAGGGTCTGGTTT  <  1:203559/80‑1                                                                                      TATAGAGCAACAAAAGATCCCGGGTATGGCGGTGGCGGTAATT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  CP009273/4368657‑4368615 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcggtaattAATAAGGCGCAGAGCGTCGTTTTGAACATAGGGTCTGGTTT  >  CP009273/4368733‑4368773

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.