New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP009273	= 1937922	20 (1.160)	4 (0.240)	4/294	NT	16.9%	coding (252/786 nt)	znuB	zinc transporter subunit: membrane component of ABC superfamily
	?	CP009273	= 1937991	20 (1.200)					coding (321/786 nt)	znuB	zinc transporter subunit: membrane component of ABC superfamily

CGTCGGGGAAATGATCGCTCATGATTGAATTATTATTTCCCGGTTGGTTAGCCGGGATCATGCTCGCCTGTGCCGCGGGTCCGCTGGGTTCGTTTGTAGTCTGGCGTCGTATGTCTTATTTCGGTGATACGCTGGCTCATGCCTCATTACTTGGCGTCGCGTTTGGTTTGTTGCTGGACGTGAATCCATTCTATGCGGTGATTGCCGTTACGCTGCTGCTGGCGGGCGGTCTGGTATGGCTGGAGAAGCGTCCACAGCTGGCGATCGACACGTTATTAGGGATTATGGCGCACAGTGCCCTGTCGCTGGGCCTGGTGGTCGTGAGTCTGATGTCTAATATTCGTGTTGATTTGATGGCTTACCTGTTCGGTGATTTGCTGGCAGTGACGCCAGAAGATCTCATCTCTATTGCGATTGGCGTGGTCATCGTGGTGGCTATTTTGTTCTGGCAATGGCGCAATTTGCTGTCAATGACGATAAGCCCGGATCTGGCGTTTGTTGATGGTGTGAAATT  >  CP009273/1937651‑1938164                                                                                                                                                                                                                                                                                |                                                                                                                                                                                                                                                   cGTCGGGGAAATGATCGCTCATGATTGAATTATTATTTCCCGGTTGGTTAGCCGGGATCATGCTCGCCTGTGCCGCGGGTCCGCTGGGTTCGGTTGTAGTCTGGCGTCGTATGTCTTATTTCGGTGATACGCTGGCTCATGCCTCATTACTTGGCGTCGCGTTTGGTTTGTTGCTGGACGTGAATCCATTCTATGCGGTGATTGCCGTTACGCTGCTGCTGGCGGGCGGTCGGGTATGGCTGGAGCAGCGTCAAAAGCTGGCGGTCGACCCGgta                                                                                                                                                                                                                                                 >  1:34202‑M1/1‑272 (MQ=255)                                                      gggATCATGCTCGCCTGTGCCGCGGGTCCGCTGGGTTCGTTTGTAGTCTGGCGTCGTATGTCTTATTTCGGTGATACGCTGGCTCATGCCTCATTACTTGGCGTCGCGTTTGGTTTGTTGCTGGACGTGAATCCATTCTATGCGGTGATTGCCGTTACGCTGCTGCTGGCGGGCGGTCTGGTATGGCTGGAGAAGCGTCCACAGCTGGCGATCGACACGTTATTAGGGATTATGGCGCACAGTGCCCTGTCGCTGGGCCTGGTGGTGGTGAGTCt                                                                                                                                                                                            >  1:6517/1‑275 (MQ=255)                                                          tgggggtggCCTTTGCGGCGGGTCTGCTGGGTTTGTTTGTTGTCTGGCGTTGTATGTCTTATTTCGGTGATACGCTGGCTCATGCCTCATTACTTGGTGTCGCGTTTGGTTTGTTGCTGGACGGGAATCCATTCTATGCGGTGATTGCCGTTACGCTGCTGCTGGCGGGCGGTCTGGTATGGCTGGAGAAGCGTCCACAGCTGGCGATCGACACGTTATTAGGGATTATGGCGCACAGTGCCCTGTCGCTGGGCCTGGTGGTCGTGAGTCTgct                                                                                                                                                                                         <  2:110188/266‑3 (MQ=255)                                                                              tgtgcgttgtgTTCGGTTGTGGTCTGGGGTCGTTTGTTTTTTTTTGGTTTTGCGCTGGCTCATGCCTCTTTATTTGGGGTTGCGTTTGGTTTGTTGCTGGATGTGAATCCATTCTATGCGGTGATTGCCGTTACGCTGCTGCTGGCGGGCGGTCTGGTATGGCTGGAGAAGCGTCCACAGCTGGCGATCGACACGTTATTAGGGATTATGGCGCACAGTGCCCTGTCGCTGGGCCTGGTGGTCGTGAGTCTGATGTCTAATATTCGTGttgattt                                                                                                                                                                    <  2:6517/265‑1 (MQ=255)                                                                              ggTCCGCTGGGTTCGTTTGTAGTCTGGCGTCGTATGTCTTATTTCGGTGATACGCTGGCTCATGCCTCATTACTTGGCGTCGCGTTTGGTTTGTTGCTGGACGTGAATCCATTCTATGCGGTGATTGCCGTTACGCTGCTGCTGGCGGGCGGTCTGGTATGGCTGGAGAAGCGTCCACAGCTGGCGATCGACACGTTATTAGGGATTATGGCGCACAGTGCCCTGTCGCTGGGCCTGGTGGTCGTGAGTCTGATGTCTAATATTCGTGttgattt                                                                                                                                                                    >  1:79267/1‑275 (MQ=255)                                                                                                                            gcgctACGCTCGCTCAGGCCGCATTGCTAGACGTCGCGGTTGGTTAGTTACTGGACGTGAATCGATACTCTGCGGTGATTGCCGTTTTGTTCCTGCTGGCGGGCGCTCTGGTACGGCTTGCGTAGAGTCCTCAGCTGGCGCTCGACACGTTATTAGAGAATATGGCGCACAGTGCCCTGTCGCCGGGCCTGGTGGTCATGAGTc                                                                                                                                                                                             >  2:68560/5‑204 (MQ=255)                                                                                                                            gTGATACGCTGGCTCATGCCTCATTACTTGGCGTCGCGTTTGGTTTGTTGCTGGACGTGAATCCATTCTATGCGGTGATTGCCGTTACGCTGCTGCTGGCGGGCGGTCTGGTATGGCTGGAGAAGCGTCCACAGCTGGCGATCGACACGGGATTAGGGATTATGGCGCACAGTGCCCTGTCGCTGGGCCTGGTGGTCGTGAGTCTGGTGTCTAATATTCGTGTTGATTTGATGGCTTACCTGTTCGGTGATTTGCTGGCAGTGACGCCagaa                                                                                                                         >  1:269018/1‑272 (MQ=255)                                                                                                                                tACGCTGGCTCATGCCTCATTACTTGGCGTCGCGTTTGGTTTGTTGCTGGACGTGAATCCATTCTATGCGGTGATTGCCGTTACGCTGCTGCTGGCGGGCGGTCTGGTATGGCTGGAGAAGCGTCCACAGCTGGCGATCGACACGTTATTAGGGATTATGGCGCACAGTGCCCTGTCGCTGGGCCTGGTGGTCGTGAGTCTGAt                                                                                                                                                                                         <  1:68562/204‑1 (MQ=255)                                                                                                                                       gCTCATGCCTCATTACTTGGCGCCGCGTTTGGTTTGTTGCTGGACGTGAATCCATTCTATGCGGTGATTGCCGTTACGCTGCTGCTGGCGGGCGGTCTGGTATGGCTGGAGAAGTGTCCACAGCGGGTGACCGCCACGTTAGTAGGGGTTATGGCGCTCAGTGCCCTGTCGCTGTGCCTGGTGGTGGTGCGTCTGCTGTCTAATAATCGTGTTCATTTGATGGCTTGCCTGTTCGGTGGTTTGCTGGCAGTGGCGCAcgaagtgttaatccttgt                                                                                                           >  2:138656/1‑262 (MQ=255)                                                                                                                                                                                  acgtggtttctttCTATGCGGTGATTGCGGTGACGCTGCTGCTGGCGGGCGGTCTGGTATGGCTGGATAAGCGTCAACAGCTGGCGATCGACACGTTATTAGGGATTATGGCGCACAGTGCGCTGTCGCTGGGCCTGGTGGTCGTGAGTCTGATGTCTAATATTCGTGTTGATTTGATGGCTTACCTGTTCGGTGATTTGCTGGCAGTGACGCCAGAAGATCTCATCTCTATTGCGATTGGCGTGGTCATCGTGGTGGCTATTTTGTTCTGGCaa                                                                <  1:138659/264‑1 (MQ=255)                                                                                                                                                                                      gAATCCATTCTATGCGGTGATTGCCGTTACGCTGCTGCTGGCGGGCGGTCTGGTATGGCTGGAGAAGCGTCCACAGCTGGCGATCGACACGTTATTAGGGATTATGGCGCACAGTGCCCTGTc                                                                                                                                                                                                                    >  2:334592/1‑123 (MQ=255)                                                                                                                                                                                          ccATTCTATGCGGTGATTGCCGTTACGCTGCTGCTGGCGGGCGGTCTGGTATGGCTGGAGAAGCGTCCACAGCTGGCGATCGACACGTTATTAGGGATTATGGCGCACAGTGACCTGTCGCTg                                                                                                                                                                                                                <  1:334604/123‑1 (MQ=255)                                                                                                                                                                                                            gCCGTTACGCTGCTGCTGGCGGGCGGTCTGGTATGGCTGGAGAAGCGTCCACAGCTGGCGATCGACACGTTATTAGGGATTATGgcg                                                                                                                                                                                                                                  >  1:222565/1‑87 (MQ=255)                                                                                                                                                                                                                ttACGCTGCTGCTGGCGGGCGGTCTGGTATGGCTGGAGAAGCGTCCACAGCTGGCGATCGACACGTTATTAGGGATTATGGCGcaca                                                                                                                                                                                                                              <  2:222559/87‑1 (MQ=255)                                                                                                                                                                                                                                  gcggTCTGGTATGGCTGGAGAAGCGTCCACAGCTGGCGATCGACACGaatattagacatcagactcacgaccaccaggcccagcgacagggcactg                                                                                                                                                                                                   >  2:133251‑M1/1‑47 (MQ=255)                                                                                                                                                                                                                                      tCTGGTATGGCTGGAGAAGCGTCCACAGCTGGCGATCGACACGaatattagacatcagactcacgaccaccaggcccagcgacagggcactgtgcg                                                                                                                                                                                               <  1:133253‑M1/96‑54 (MQ=255)                                                                                                                                                                                                                                            aTGGCTGGAGAAGCGTCCACAGCTGGCGATCGACACGaatattagacatcagactcacgaccaccaggcccagcgacagggcact                                                                                                                                                                                                    >  2:199166‑M1/1‑37 (MQ=255)                                                                                                                                                                                                                                                cTGGAGAAGCGTCCACAGCTGGCGATCGACACGaatattagacatcagactcacgaccaccaggcccagcgacagggcactgtgc                                                                                                                                                                                                <  1:199172‑M1/85‑53 (MQ=255)                                                                                                                                                                                                                                                cTGGAGAAGCGTCCACAGCTGGCGATCGACACGTTATTAGGGATTATGGCGCACAGTGCCCTGTCGCTGGGCCTGGTGGTCGTGAGTCTGATGTCTAATATTCGTGTTGATTTGATGGCTTACCTGTTCGGTGATTTGCTGGCAGTGACGCCAGAAGATCTCATCTCTATTGCGATTGGCGTGGTCATCgtg                                                                                     >  2:161948/1‑192 (MQ=255)                                                                                                                                                                                                                                                cTGGAGAAGCGTCCACAGCTGGCGATCGACACGTTATTAGGGATTATGGCGCACAGTGCCCTGTCGCTGGGCCTGGTGGTCGTGAGTCTGATGTCTAATATTCGTGTTGATTTGATGGCTTACCTGTTCGGTGATTTGCTGGCAGTCACGCCTGAAGATCTCATCTCTATTGCGATTGGCGTGGTCATCGTGGTGGCTATTTTGTTCTGGCAATGGCGCAATTTGCTGTCAATGACGATAAGCCCGGATCTGGCGTTTGTTGTTGGTGTGAAAtt  >  1:293645/1‑275 (MQ=255)                                                                                                                                                                                                                                                cTGGAGAAGCGTCCACAGCTGGCGATCGACACGTTATTAGGGATGATGGCGCACAGTGCCCTGTCGCTGGGCCTGGTGGTCGTGAGTCTGATGTCTAATATTCGTGTTGATTTGATGGCTTACCTGTTCGGTGATTTGCTGGCAGTGACGCCAGAAGATCTCATCTCTATTGCGATTGGCGTGGTCGTCTGGGTGGCGATTTTGTTCTGGCAATGGCGCAATTTGCTGTCAATGACGAGTAGCTCGGTGCTGGTGTTTGTTGGTgtggtgttatt  >  2:114387/1‑265 (MQ=255)                                                                                                                                                                                                                                                    agaAGCGTCCACAGCTGGCGATCGACACGTTATTAGGGATTATGGCGCACAGTGCCCTGTCGCTGGGCCTGGTGGTCGTGAGTCTGATGTCTAATATTCGTGTTGATTTGATGGCTTACCTGTTCGGTGATTTGCTGGCAGTGACGCCAGAAGATCTCATCTCTATTGCGATTGGCGTGGTCATCGtggtgg                                                                                 <  1:161952/192‑1 (MQ=255)                                                                                                                                                                                                                                                                     gCGATCGACACGTTATTAGGGATTATGGCGCACAGTGCCCTGTCGCTGGGCCTGGTGGTCGTGAGTc                                                                                                                                                                                             >  1:1909/1‑67 (MQ=255)                                                                                                                                                                                                                                                                         tCGACACGTTATTAGGGATTATGGCGCACAGTGCCCTGTCGCTGGGCCTGGTGGTCGTGAGTCTGAt                                                                                                                                                                                         <  2:1909/67‑1 (MQ=255)                                                                                                                                                                                                                                                                          cGACACGTTATTAGGTATTATGGTACACAGTGCCCTGTCGCTGGGCCtggtgg                                                                                                                                                                                                      >  1:232861/1‑53 (MQ=255)                                                                                                                                                                                                                                                                              acGTTATTAGGGATTATGGCGCACAGTGCCCTGTCGCTGGGCCTGGTGGTCGt                                                                                                                                                                                                  <  2:232854/53‑1 (MQ=255)                                                                                                                                                                                                                                                                                |                                                                                                                                                                                                                                                   CGTCGGGGAAATGATCGCTCATGATTGAATTATTATTTCCCGGTTGGTTAGCCGGGATCATGCTCGCCTGTGCCGCGGGTCCGCTGGGTTCGTTTGTAGTCTGGCGTCGTATGTCTTATTTCGGTGATACGCTGGCTCATGCCTCATTACTTGGCGTCGCGTTTGGTTTGTTGCTGGACGTGAATCCATTCTATGCGGTGATTGCCGTTACGCTGCTGCTGGCGGGCGGTCTGGTATGGCTGGAGAAGCGTCCACAGCTGGCGATCGACACGTTATTAGGGATTATGGCGCACAGTGCCCTGTCGCTGGGCCTGGTGGTCGTGAGTCTGATGTCTAATATTCGTGTTGATTTGATGGCTTACCTGTTCGGTGATTTGCTGGCAGTGACGCCAGAAGATCTCATCTCTATTGCGATTGGCGTGGTCATCGTGGTGGCTATTTTGTTCTGGCAATGGCGCAATTTGCTGTCAATGACGATAAGCCCGGATCTGGCGTTTGTTGATGGTGTGAAATT  >  CP009273/1937651‑1938164

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.