New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP009273	= 4288498	17 (0.980)	5 (0.310)	5/286	NT	20.0%	coding (686/2148 nt)	fdhF	formate dehydrogenase‑H, selenopolypeptide subunit
	?	CP009273	= 4288751	24 (1.470)					coding (433/2148 nt)	fdhF	formate dehydrogenase‑H, selenopolypeptide subunit

CTGGTCAGAGAACGCACGGTTTCCACGCCCTGGTAGAACTGGGTTACACCCATGCCCCACAGGATGGCGGCGCTTTTCGCCTGGGCATACATCCGTGCCGCCTGACGAATCTCACTGGCGCTGACGCCGGTGATATCTTCAACCGACTCCGGCGTGTAGCCTTCAACGATTTTACGATACTCTTCAAAGCCTTCTGTACGTGAAGCGACGAACGCTTTGTCGTACAGATTTTCTTCAATAATGACATGGCCCATCGCATTCAACAGCGCGATGTTCGAGCCGTTTTTCAGTGCAATGTGCATGTCAGCAATGCGCGCGGTTTCAATTTTGCGCGGATCGCAGACGATAATTTTCGCCCCGTTACGTTTAGCGTTAATTACGTGATTCGCCACGATTGGGTGGGAATCCGCCGGGTTGTACCCGAAAACGAACACTAAATCGGTATTATCAATTTCGTTAATAGCATTGCTCATTGCGCCATTACCGACCGATTGGTGCAGACCT  >  CP009273/4288243‑4288746                                                                                                                                                                                                                                                                |                                                                                                                                                                                                                                                         cTGGTCAGAGACCCCACGGTTTGCACGCCCTGGTAGAACTGGGTAACAGCCATGCCCCACAGTATGTCGGCGCTGTTCTCGTGGACATACATCAGTGCGGCCACACGTATCTAACTGGCGCTGAAGCCGGTGATATCTTCAACCGACTCCGGCTTGTAGCCTGCAACGATTTTACGATACTCTTCAAACCCATCTGTACATGCAGCGACGACCGCTTTGTCGTACCGATTTTATTCAATAATGACATGGCCCAACGCATTAAAACGCGCGAttcg                                                                                                                                                                                                                                       >  2:93072/1‑272 (MQ=255)                            cccTGGTAGAACTGGGTTACACCCATGCCCCACAGGATGGCGGCGCTTTTCGCCTGGGCATACATCCGTGCCGCCTGACGAATCTCACTGGCGCTGACGCCGGTGATATCTTCAACCGACTCCGGCGTGTAGCCTTCAACGATTTTACGATACTCTTCAAAGCCTTCTGTACGTGAAGCGACGAACGATTTGTCGTACAGATTTTCTTCAATAATGACATGGCCCATCGgttgaaggtatgcaccaatcggtcgttaatggcgcaatgagcaatg                                                                                                                                                                                                            >  1:70874‑M1/1‑229 (MQ=255)                                                          aaactgagggggtcgcttttcccctcgtcACATATCCGTGCCCCCTGACGAATTCTACGTTCGCTTACGCCTGTTATATCTTCAACCTACTCCGGCGGTTAGCCTTCAACGATTTTACGATACTCTTCAAATCCTTCTGTACGTGAATCGACGAACGCTTTGTCGTACAGATTTTCTTCAATAATTACATGGCCCATCGgttgcaggtctgcaccaatcggtcggtaatggcgcaatgagcaatgctattaacgaaattgataataccgattta                                                                                                                                                                               <  2:70872‑M1/261‑76 (MQ=255)                                                                                               gTGCCGCCTGACGAATCTCACTGGCGCTGACGCCGGTGATATCTTCAACCGACTCCGGCGTGTAGCCTTCAACGATTTTACGATACTCTTCAAAGCCTTCTGTACGTGAAGCGACGAACGCTTTGTCGTACAGATTTTCTTCAATAATGACATGGCCCATCGgttgcaggtctgcacaaatcggtcggtaatggcgcaatgagcaatgctattaacgaaattgataataccgatttaatgttcgttttcgggtacaacccggcggattcacaccc                                                                                                                                         >  1:174947‑M1/1‑162 (MQ=255)                                                                                                                                        tCTTCAACCGACTCCGGCGTGTAGCCTTCAACGATTTTACGATACTCTTCAAAGCCTTCTGTACGTGAAGCGACGAACGCTTTGTCGTACAGATTTTCTTCAATAATGACATGGCCCATCGCATTCAACAGCGCGATGTTCGAGCCGTTTTTCAGTGCAATGTGCATGTCAGCAATGACCGCGGTTTCAATTTTGCGCGGATCGAAGACGATAATTTTCGCCCCGTTACGTTTAGCGTTAATTAc                                                                                                                              >  1:178866/1‑245 (MQ=255)                                                                                                                                          ttaaaCCGACGCCGGCGGGTAGCTTTCAACGATTTTTCGATACTCTTCAAATCTTTCTGTACGTGAAGCGACGAACTCTTTGTCGTACAGATTTTCTTGAATAATGACATGGCCCATCGCATTCAACCGCGCGATGTTCGAGCCGTTTTTCAGTGCAATGCGCATGTCAGCAATGCGCGCGGTTTCAATTTTGCGCGGATCGCAGACGATAATTTTCGCCCCGTTACGTTTAGCGTTAATTACGTGATTCGCCACGATTGGGTGGGAAgccgcc                                                                                               <  2:112868/271‑1 (MQ=255)                                                                                                                                                                           tttACGATACTCTTCAAAGCCTTCTGTACGTGAAGCGACGAACGCTTTGTCGTACAGATTTTCTTCAATAATGACATGGCCCATCGgttgcaggtctgcaccaatcggtcggtaatggcgcaatgagcaatgctattaacgaaattgataatgccgatttagtgttcgttttcgggtacaacccggcggattccatcccaatcgtggcgaatcacgtacttaacgctaaacgtaacgaggggaaaattatagtctgcgatccgaccaaaattgaa                                                             >  1:316155‑M1/1‑86 (MQ=255)                                                                                                                                                                             tACGATACTCTTCAAAGCCTTCTGTACGTGAAGCGACGAACGCTTTGTCGTACAGATTTTCTTCAATAATGACATGGCCCATCGCATTCAACAGCGCGATGTTCGAGCCGTTTTTCAGTGCAATGTGCATGTCAGCAATGCGCGCGGTTTCAATTTTGCGCGGATCGCAGACGATAATTTTCGCCCCGTTACGTTTAGCGTTAATTACTTGATTCGCCCCGGTTGGGTGAGAATCCGCCGGGTTGTACACGAAAACGACAACTAAAACGGaatat                                                           >  1:12121/1‑273 (MQ=255)                                                                                                                                                                                    ctctTCAAAGCCTTCTGTACGTGAAGCGACGAACGCTTTGTCGTACAGATTTTCTTCAATAATGACATGGCCCATCGCATTCAACAGCGCGATGTTCGAGCCGTTTTTCAGTGCAATGTGCATGTCAGCAATGCGCGCGGTTTCAATTTTGCGCGGATCGCAGACGATAATTTTCGCCCCGTTACGTTTAGCGTTAATTACGTGATTCGCCACGATTGGGTGGGAATCCGCCGGGTTGTACCCGAAAACGAACACTAAAACGGTATTATCAAtt                                                     >  1:126301/1‑274 (MQ=255)                                                                                                                                                                                                 tCTGTACGTGAAGCGACGAACGCTTTGTCGTACAGATTTTCTTCAATAATGACATGGCCCATCGCATTCAACAGCGCGATGTTCGAGCCGTTTTTCAGTGCAATGTGCATg                                                                                                                                                                                                           >  1:246658/1‑111 (MQ=255)                                                                                                                                                                                                 tCTGTACGTGAAGCGACGAACGCTTTGTCGTACAGATTTTCTTCAATAATGACATGGCCCATCGCATTCAACAGCGCGATGTACGAGCCGTTTTTCAGTGCAATGTGCATGTCAGCAATGCGCGCGGTTTCAATTTTGCGCGGATCGCAGACGATAAtt                                                                                                                                                           >  2:154077/1‑159 (MQ=255)                                                                                                                                                                                                     tACGTGAAGCGACGAACGCTTTGTCGTACAGATTTTCTTCAATAATGACATGGCCCATCGCATTCAACAGCGCGATGTTCGAGCCGTTTTTCAGTGCAATGTGCATGTCAg                                                                                                                                                                                                       <  2:246650/111‑1 (MQ=255)                                                                                                                                                                                                       ggtGAAGCGACGAACGCTTTGTCGTACAGATTTTCTTCAATAATGACATGGCCCATCGgttgcaggtctgcaccaatcggtcggtaatggcgcaatgagcaatgatattaacgaaattgataataccgatttagtgttcgttttcgggtacaacccggcggattcccacccaatcgtggcgaatcacgtaattaacgctaaacgtaacggggcgaaaattatcgtctgcgatccgcgcaaaattgaaaccgcgcgcattgctgacatgcacattg                                 <  1:206705‑M1/274‑218 (MQ=255)                                                                                                                                                                                                          gAAGCGACGAACGCTTTGTCGTACAGATTTTCTTCAATATTGACATGGCCCATCGCATTCAACAGCGCGATGTTCGTGCCGTTTTTCAg                                                                                                                                                                                                                        >  1:95731/1‑89 (MQ=255)                                                                                                                                                                                                              cgacgaACGCTTTGTCGTACAGATTTTCTTCAATATTGACATGGCCCATCGCATTCAACAGCGCGATGTTCGAGCCGTTTTTCAGTGCa                                                                                                                                                                                                                    <  2:95729/89‑1 (MQ=255)                                                                                                                                                                                                                               tACAGATTTTCTTCAATAATGACATGGCCCATCGCATTCAACAGCGCGATGTTCGAGCCGTTTTTCAg                                                                                                                                                                                                                        >  1:199531/1‑68 (MQ=255)                                                                                                                                                                                                                                   gATTTTCTTCAATAATGACATGGCCCATCGCATTCAACAGCGCGATGTTCGAGCCGTTTTTCAGTGCa                                                                                                                                                                                                                    <  2:199525/68‑1 (MQ=255)                                                                                                                                                                                                                                    aTTTTCTTCAATAATGACATGGCCCATCGCATTCACCAGCGCGATGTTCGAGCCGTTTTTCAGTGCAATGTGCATGTCAGCAATGCGCGCGGTTTCAATTTTGcgcg                                                                                                                                                                            >  1:131654/1‑107 (MQ=255)                                                                                                                                                                                                                                    aTTTTCTTCAATAATGACATGGCCCATCGCATTCAACAGCGCGATGTTCGAGCCGTTTTTCAGTGCaa                                                                                                                                                                                                                   >  1:104051/1‑68 (MQ=255)                                                                                                                                                                                                                                      tttCTTCAATAATGACATGGCCCATCGCATTCAACAGCGCGATGTTCGAGCCGTTTTTCAGTGCAATGTGCATGTCAGCAATGCGCGCGGTTTCAATTTTGCGCGGATCGCAGACGATAATTTTCGCCCCGTTACGTTTAGCGTTACTTACGTGATTCNCCACGATTGGGTGGGAATCCGCCGGGTTGTACCCGAAAACGAACACTAAATCGGTATTATCAATTTCGTTAATAGCATTGCTCATTGCGCCATTACCGACCAATTGGTGCAGACCt  >  1:305303/1‑275 (MQ=255)                                                                                                                                                                                                                                        tcttcAATAATGACATGGCCCATCGCATTCAACAGCGCGATGTTCGAGCCGTTTTTCAGTGCAAtgtg                                                                                                                                                                                                               <  2:104049/68‑1 (MQ=255)                                                                                                                                                                                                                                        tcttcAATAATGACAGGGCCCAGCGCATTCAACAGCGCGATGTTCGAGCCGTTTTTCAGTGCAATGTGCATGTCAGCAATGCGCGCGGTTTCAATTTTGCGCGGATc                                                                                                                                                                        <  2:131652/107‑1 (MQ=255)                                                                                                                                                                                                                                                             aTCGgttgcaggtctgaaccaatcggtcggtaatggcgcaatgagcaa                                                                                                                                                                                                              <  2:337136‑M1/48‑45 (MQ=255)                                                                                                                                                                                                                                                               cGgttgcaggtctgcaccaatcggtcggtaatggcgcaatgagcaatgctattaacgaaattgataataccgatttagtgttcgttttcgggtacaacccggcggattcccacccaatcgtggcgaatcacgtaattaacgctaaacgtaacg                                                                                                   >  2:136367‑M1/1‑2 (MQ=255)                                                                                                                                                                                                                                                                |                                                                                                                                                                                                                                                         CTGGTCAGAGAACGCACGGTTTCCACGCCCTGGTAGAACTGGGTTACACCCATGCCCCACAGGATGGCGGCGCTTTTCGCCTGGGCATACATCCGTGCCGCCTGACGAATCTCACTGGCGCTGACGCCGGTGATATCTTCAACCGACTCCGGCGTGTAGCCTTCAACGATTTTACGATACTCTTCAAAGCCTTCTGTACGTGAAGCGACGAACGCTTTGTCGTACAGATTTTCTTCAATAATGACATGGCCCATCGCATTCAACAGCGCGATGTTCGAGCCGTTTTTCAGTGCAATGTGCATGTCAGCAATGCGCGCGGTTTCAATTTTGCGCGGATCGCAGACGATAATTTTCGCCCCGTTACGTTTAGCGTTAATTACGTGATTCGCCACGATTGGGTGGGAATCCGCCGGGTTGTACCCGAAAACGAACACTAAATCGGTATTATCAATTTCGTTAATAGCATTGCTCATTGCGCCATTACCGACCGATTGGTGCAGACCT  >  CP009273/4288243‑4288746

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.