New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP009273	= 4288498	17 (0.980)	5 (0.310)	5/286	NT	20.0%	coding (686/2148 nt)	fdhF	formate dehydrogenase‑H, selenopolypeptide subunit
	?	CP009273	= 4288751	24 (1.470)					coding (433/2148 nt)	fdhF	formate dehydrogenase‑H, selenopolypeptide subunit

ATGTTCGAGCCGTTTTTCAGTGCAATGTGCATGTCAGCAATGCGCGCGGTTTCAATTTTGCGCGGATCGCAGACGATAATTTTCGCCCCGTTACGTTTAGCGTTAATTACGTGATTCGCCACGATTGGGTGGGAATCCGCCGGGTTGTACCCGAAAACGAACACTAAATCGGTATTATCAATTTCGTTAATAGCATTGCTCATTGCGCCATTACCGACCGATTGGTGCAGACCTGCAACCGATGGGCCGTGTCAGACACGAGCGCAGCAGTCAACGTTATTGGTACCAATAACGGCGCGCGCAAATTTTTGCATTACATAGTTGGTTTCGTTACCCGTACCACGCGAGGAGCCGGTCGTCTGGATGGCATCCGGACCGTACTTCTCTTTGATGGCGCTCAGGCGCTCGGCAACGTAATTCAGTGCCTCATCCCAGGAAACAGGTTCGAGTTTGCCGCCACGCTGGCGACGGATCATGGGGGTTTTCAGGCGCGGGGTC  >  CP009273/4288513‑4289010                                                                                                                                                                                                                                               |                                                                                                                                                                                                                                                                    aTGTTCGATCTGTTTTTCAGTGCAATTTGCATGTCAGCAATGCGCGCGTTTTCAATTTTGCGCGGATCGCAGACGATAATTTTCGCCCCGTTACGTTTAGCGTTAATTACGTGATTCGCCACGATTGGGTGGGAATCCGCCGGGTTGTACCCGAAAACGAACACTAAATCGGTATTATCAATTTCGTTAATAGCATTGCTCATTGCGCCATTACCGACCGCTTGGTGCAGACCTGCAACCGATGGGCCGTGTCAGACACGAGCGCAGCAGTCAAc                                                                                                                                                                                                                                 <  1:93074/275‑1 (MQ=255)           cGTTTGTCAGTGCATGGTGCATTTCAGCTGTGCGCGCGTTTTCAATTTTGCGCGGATCGCAGATGATTGTTTTCGCCCCGTTACGTTTAGCGTTAATTACGGGATTCGCCACGAGTGGGTGGGAATCCGCCGGGTTGTACCCGAAAACGAACACTAAATCGGTATTATCAATTTCGTTAATAGCATTGCTCATTGCGCCATTACCGACCGATTGGTGCAGACCTGCAACCGATGGGCCGTGTCAGACACGAGCGCAGCAGTCAACGTTATTGGt                                                                                                                                                                                                                        <  2:305292/274‑1 (MQ=255)                       cAATGTGCATGTCAGCAATGCGCGCGGTTTCAATTTTGCGCGGATCGCAGACGATAATTTTCGCCCCGTTACGTTTAGCGTTAATTACGTGATTCGCCACGATTGGGTGGGAATCCGCCGGGTTGTACCCGAAAACGAACACTAAATCGGTATTATCAATTTCGTTAATATCATTGCTCATTGCGCCATTACCGACCGATTGGTGCAGACCTGCAACcgatgggccatgtcattattgaagaaaatctgtacgacaaagcgttcgtcgcttcacc                                                                                                                                                                                                           <  1:206705‑M2/275‑59 (MQ=255)                                                   ttCAATTTTGGTCGGATCGCAGACTATAATTTTCCCCTCGTTACGTTTAGCGTTAAGTACGTGATTCGCCACGATTGGGATGGAATCCGCCGGGTTGTACCCGAAAACGAACACTAAATCGGCATTATCAATTTCGTTAATAGCATTGCTCATTGCGCCATTACCGACCGATTGGTGCAGACCTGCAACcgatgggccatgtcattattgaagaaaatctgtacgacaaagcgttcgtcgcttcacgtacagaaggctttgaagagtatcgtaaa                                                                                                                                                                               >  1:316155‑M2/1‑189 (MQ=255)                                                            gagccagtctcAGTCGATAATTTGCGCCCCGTTACGTTTAGCGTTAATTACGTGATTCGCCACGATTGGGTGGGAATCCGCCGGGTTGTACCCGAAAACGAACACTAAATCGGTATTATCAATTTCGTTAATAGCATTGCGCATTGCGCAATTACCGACCGATTGGTGCAGACCTGCAACCGATGGGCCGTGTCAGACACGAGCGCAGCAGTCAACGTTATTGGTACCAATAACGGCGCGCGCAAATTTTTGCATTACATAGTTGGTTTCGTTAc                                                                                                                                                                      <  1:94904/265‑1 (MQ=255)                                                                              aaTTTTCGCCCCGTTACGTTTAGCGTTAATTACGTGATTCGCCCCGATTGGGTGGGAATCCGCCGGGTTGTATCAGAAAACGAACACTAATTCGGTATTATCAATTTCGTTAATAGCATTGATCATTGAGCCTTTACAGACCGATTGTTGCAGACCTGCAACCGATGGGCCGTGTCAAACACAAGAGCACCAGTCAACGTTATAGACACCAACAAACGAGACCCAAAATGACAGCATGACACTGTTGGATTCGTTACCCGTACCCcgccgtgat                                                                                                                                                     >  2:94902/1‑268 (MQ=255)                                                                                     gCCCCGTTACGTTTAGCGTTAATAACGTAATTCGCCACGATTGGGTGGGAATCCGCCGGGTTGTACCCGAAAACGAACACTAAATCGGTATTATCAATTTCGTTAATAGCATTGCTCATTGCGCCATTACCGACCGATTGGTGCAGACCTGCAACCGATGGGCCGTGTCAGACACGAGCGCAGNAGTCAACGTTATTGGTACCAATAACGGCGCGCGCAAATTTTTGCATTACATAGTTGGTTTCGTTAACCGTACCACGCGAGGAGACGgtcgt                                                                                                                                             >  1:236407/1‑275 (MQ=255)                                                                                         cGTTACGTTTAGCGTTAATTACGTGATTCGCCACGATTGGGTGGGAATCCGCCGGGTTGTACCCGAAAACGAACACTAAATCGGTATTATCAATTTCGTTAATAGCATTGCTCATTGCGCCATTACCGACCGATTGGTGCAGACCTGCAACcg                                                                                                                                                                                                                                                                   >  2:136367‑M2/1‑151 (MQ=255)                                                                                           ttaactttacagTTTATTACGTGTTTGCCCACGTTTTGGTGTGAATCCGACGGTTTGTACCCGAAAACGAACACTAAATCGTTATTATCAATTTCGTTCATATCATTGCTCATTGCGCCATTACCGACCGATTGGTGCAGACCTGCAACCGATGGGCCGTGTCAGACACGAGCGCAGCAGTCAACGTTATTGGTACCAATAACGGCGCGCGCAAATTTTTGCATTACATAGTTGGTTTCGTTACCCGTACCACGCGAGGAGCCGGTCGTCTGGAt                                                                                                                                       <  2:236400/264‑1 (MQ=255)                                                                                                     cGTTAATTACGTGATTCGCCACGATTGGGTGGGAATCCGCCGGGTTGTACCCGAAAACGAACACTAAATCGGTATTATCAATTTCGTTAATAGCATTGCTCATTGCGCCATTACCGACCGATTGGTGCAGACCTGCAACCGATGGGCCGTGTCAGACACGAGCGCAGCAGTCAACGtt                                                                                                                                                                                                                              >  2:125340/1‑178 (MQ=255)                                                                                                       ttAATTACGTGATTCGCCACGATTGGGTTGGAATCCGCCGGGTTGTACCCGAAAACGAACACTAAATCGGTATTATCAATTTCGTTAATAGCATTGCTCATTGCGCCATTACCGACCGATTGGTGCAGACCTGCAACCGATGGGCCGTGTCAGACACGAGCGCAGCAGTCa                                                                                                                                                                                                                                   <  1:162857/171‑1 (MQ=255)                                                                                                         aaTTACGTGATTCGCCACGATTGGGTGGGAATCCGCCGGGTTGTACCCGAAAACGAACACTAAATCGGTATTATCAATTTCGTTAATAGCATTGCTCATTGCGCCATTACCGACCGATTGGTGCAGACCTGCAACCGATGGGCCGTGTCAGACACGAGCGCAGCAGTCAACGTTATTg                                                                                                                                                                                                                          <  1:125342/178‑1 (MQ=255)                                                                                                               gTGATTCGCCACGATTGGGTGGGAATCCGCCGGGTTGTACCCGAAAACGAACACTAAATCGGTATTATCAATTTCGTTAATAGCATTGCTCATTGCGCCATTACCGACCGATTGGTGCAGACCTGCAACCGATGGGCCGTGTCAGACACGAGCGCAGCAGTCAACGTTATTGGTACCAATAACNGCGCGCGCAAATTTTTGCATTACATAGTTGGTTTCGTTACCCGTACCACGAGCGGAGCCGTTCGTTTGGATGGGATACGGACCGAAATtct                                                                                                                   >  1:252129/1‑275 (MQ=255)                                                                                                                         aCGATTGGGCGGGAATCCGCCGGGTTGTACCCGAAAACGAACACTAAATCGGTATTATCAATTTCGTTAATAGCATTGCTCATTGCGCCATTACCGACCGATTGGTGCAGACCTGCAACCGATGGGCCGTGTCAGACACGAGCGCAGCAGTCAACGTTATTGGTACCAATAGCGgcgcgcgc                                                                                                                                                                                                      <  1:331277/182‑1 (MQ=255)                                                                                                                             ttGGGTGGGAATCCGCCGGGTTGTACCCGAAAACGAACACTAAATCGGTATTATCAATTTCGTTAATAGCATTGCTCATTGCGCCATTACCGACCGATTGGTGCAGACCTGCAACCGATGGGCCGTGTCAGACACGAGCGCAGCAGTCAACGTTATTGGTACCAATAACGGCGCGCGCAAATTTTTGCATTACATAg                                                                                                                                                                                   >  2:121810/1‑197 (MQ=255)                                                                                                                               gggtgtgAATCCGCCGGGTTGTACCCGAAAACGAACATTAAATCGGTATTATCAATTTCGTTAATAGCATTGCTCATTGCGCCATTACCGACCGATTTGTGCAGACCTGCAACcgatgggccatgtcattattgaagaaaatctgtacgacaaagcgttcgtcgcttcacgtacagaaggctttgaagagtatcgtaaaatcgttgaaggctacacgccggagtcggttgaagatatcaccggcgtcagcgccagtgagattcgtcaggcggcac                                                                                                   >  1:174947‑M2/1‑113 (MQ=255)                                                                                                                                 gtgggAATCCGCCGGGTTGTACCCGAAAACGAACACTAAATCGGTATTATCAATTTCGTTAATAGCATTGCTCATTGCGCCATTACCGACCGATTGGTGCAGACCTGCAACCGATGGGCCGTGTCAGACACGAGCGCAGCAGTCAACGTTATTGGTACCAATAACGGCGCGCGCAAATTTTTGCATTACATAGTTgg                                                                                                                                                                               <  1:121812/197‑1 (MQ=255)                                                                                                                                                                    ctatttCGTTATTNNCAAGTTCGTGCCTATCATTTCTTATTGCTCCTTTACCGACCGATTGGTGCAGTCCTGATACGGCTGGGACGTGACGTACACGATCGCAGCAGTCAACGTTATTGGTACCAATAACGGCTCGCGCAAATTTTTGCATTACCTAGTTGGTTTCGTTACCCGTACCACGCGAGGAGCCGGTCGTCTGGATGGCATCCGGACCGTACTTCTCTTTGATGGCGCTCAGGCGCTCGGCAACGTAATTCAGTGCCTCATCCCAGGaa                                                              <  2:252121/270‑1 (MQ=255)                                                                                                                                                                     tAAATCGGTATTATCAATTTCGTTAATAGCATTGCTCATTGCGCCATTACCGACCGATTGGTGCAGACCTGCAACcgatgggccatgtaattattgaagaaaatctgtacgacaaagcgttcgtcgattcacgtacagaaggatttgaagagtatcgtaaaatcgttgaaggctaaccgccggagtaggttgaagatataacaggcgtaagcgaacgtagaattcgtcagggggcacggatatgtgacgaggggaaaagcgaccccctcagttt                                                              <  2:70872‑M2/274‑200 (MQ=255)                                                                                                                                                                             tattatCAATTTCGTTAATAGCATTGCTCATTGCGCCATTACCGACCGATTGGTGCAGACCTGCAACCGATGGGCCGTGTCAGACACGAGCGCAGCAGTCAACGTTATTGGTACCAATAACGGCGCGCGCAAATTTTTGc                                                                                                                                                                                            >  1:301437/1‑140 (MQ=255)                                                                                                                                                                                 atCAATTTCGTTAATAGCATTGCTCATTGCGCCATTACCGACCGATTGGTGCAGACCTGCAACCGATGGGCCGTGTCAGACACGAGCGCAGCAGTCAACGTTATTGGTACCAATAACGGCGCGCGCAAATTTTTGCATTa                                                                                                                                                                                        <  2:301426/140‑1 (MQ=255)                                                                                                                                                                                                 gaaaggcccNTTGAGCAATTACCGACCGATTGCTCCTGACCGCCACCCGATCGGCCGTGTCGGACACGGGCGCGTCAGTCAACGTTATTTGTACCAAAAACGGCGCGCGCAAATTTTTGCATTACATAGTTGGTTTCGTTACCCGTACCACGCGAGGAGTCGGTCGTCTGGATGGCATCCGGACCGTACTTCTCTTTGATGGCGCTCAGGCGCTCGGCAACGTAATTCAGTGCCTCATCCCAGGAAACAGGTTCGAGTTTGCCGCCACGCTGGCg                                 <  2:126299/267‑1 (MQ=255)                                                                                                                                                                                                  cATTGCTCATTGCGCCATTAACGACCGATTGGTGCATACCTTCAACcgatgggccatgtcattattgaagaaaatctgtacgacaaatcgttcgtcgcttcacgtacagaaggctttgaagagtatcgtaaaatcgttgaaggctacacgccggagtcggttgaagatatcaccggcgtcagcgccagtgagattcgtcaggcggcacggatgtatgcccaggcgaaaagcgccgccatcctgtggggcatgggtgtaacccagttctaccaggg                                >  1:70874‑M2/1‑46 (MQ=255)                                                                                                                                                                                                    ttGCTCATTGCGCCATTACCGACCGATTGGTTCAGACCTGCAACcgat                                                                                                                                                                                                                                                                 <  2:337136‑M2/48‑5 (MQ=255)                                                                                                                                                                                                    ttGCTCATTGCGCCATTACCGACCGATTGGTGCAGACCTGCAACCGATGGGCCGTGTCAGACACGAGAGCAGCAGTCAACGTTATTGGTACCAATAACGGCGCGCGCAAATTTTTGCATTACATAGTTGGTTTCGTTACCCGTACCAAGCGAGGAGCCGGTCGTCTGGATGGCATCAGGACCGTACTTATCTTTGATGGCGCTCAGGCGCTCGGAAAAGTAATTCAGTGCCTCATCCCAGGAAACAGGATCGAGTTTGCCACAACGCAGGCGACg                              >  1:164340/1‑275 (MQ=255)                                                                                                                                                                                                    gccagcATTGCGCCATTACCGACCGATTGGTGCAGACCTGCAACCGATGGGCCGTGTCAGACACGAGCGCAGCAGTCAACG‑TATTGGTACCAATAACGGCGCGCGCAAATTTTTGCATTACATAGTTGGTTTCGTTACCCGTACCACGCGAGGAGCCGGTCGTCTGGATGGCATCCGGACCGTACTTCTCTTTGATGGCGCTCAGGCGCTCGGCAACGTAATTCAGTGCCTCATCCCAGGAAACAGGTTCGAGTTTGCCGCCAAGCTGGCGACg                              <  1:329608/269‑1 (MQ=255)                                                                                                                                                                                                            tGCGCCATTACCGACCGATTGGTGCAGACCTGCAACCGATGGGCCGTGTCAGACACGAGCGCAGCAGTCAACGTTATTGGTACCAATAACGGCGCGCGCAAATTTTTGCATTACATAGTTGGTTTCGTTACCCGTACCACGCGAGGAGCCGGACGTCTGGATGGCATCCGGACCGTACTTCTCTTTGATGGCGCTCAGGCGCTCGGCAACGTAATTCAGTGCCTCATCCCAGGAAACAGGTTCGAGTTTGCCGCCACGCTGGCGACGGAACAggg                      >  1:316899/1‑275 (MQ=255)                                                                                                                                                                                                                    tACCGACCGATTGGTGCAGACCTGCAACCGATGGGCCGTGTCAGACACGAGCGCAGCAGTCAACG‑TATTGGTACCAATAACGGCGCGCGCAAATTTTTGCATTACATAGTTGGTTTCGTTACCCGTACCACGCGAGGAGCCGGGCGTCTGGATGGCATCCGGACCGTACTTCTCTTTGATGGCGCTCAGGCGCTCGGCAACGTAATTCAGTGCCTCATCCCAGGAAACAGGGTCGCGTTTGCCCGCACGATGGCAACGGATCCTgggggcgggcg             >  2:329596/1‑269 (MQ=255)                                                                                                                                                                                                                           cgaTTGGTGCAGACCTGCAACCGATGGGCCGTGTCAGACACGAGCGCAGCAGTCAACGTTATTGGTACCAATAACGGCGCGCGCAAATTTTTGCATTACATAGTTGGTTTCGTTACCCGTACCACGCGAGGAGCCGGTCGTCTGGATGGCATCCGGACCGTACTtc                                                                                                                    >  2:114707/1‑166 (MQ=255)                                                                                                                                                                                                                               tGGTGCAGACCTGCAACCGATGGGCCGTGTCAGACACGAGCGCAGCAGTCAACGTTATTGGTACCAATAACGGCGCGCGCAAATTTTTGCATTACATAGTTGGTTTCGTTACCCGTACCACGCGAGGAGCCGGTCGTCTGGATGGCATCCGGACCGTACTTCTCtt                                                                                                                <  1:114709/166‑1 (MQ=255)                                                                                                                                                                                                                                ggggcggaacTGCAACGGATGGGCCGTGTCAGACACGAGCGCAGCAGTCAACGTTATTGGTACCAAGAACGGCGCGCGAAAATTTTTGCATTACATATTTGGTTTCGTTACCCGTACCACGCGAGGAGCCGGTCGTCTGGATGGCATCCGGACCGTACTTCTCTTTGATGGCGCTCAGGCGCTCGGCAACGTAATTCAGTGCCTCATCCCAGGAAACAGGTTCGAGTTTGCCGCCACGCTGGCGACGGATCATGGGGGTTTTCAGGCGCGGGGTc  <  1:190583/266‑1 (MQ=255)                                                                                                                                                                                                                                               |                                                                                                                                                                                                                                                                    ATGTTCGAGCCGTTTTTCAGTGCAATGTGCATGTCAGCAATGCGCGCGGTTTCAATTTTGCGCGGATCGCAGACGATAATTTTCGCCCCGTTACGTTTAGCGTTAATTACGTGATTCGCCACGATTGGGTGGGAATCCGCCGGGTTGTACCCGAAAACGAACACTAAATCGGTATTATCAATTTCGTTAATAGCATTGCTCATTGCGCCATTACCGACCGATTGGTGCAGACCTGCAACCGATGGGCCGTGTCAGACACGAGCGCAGCAGTCAACGTTATTGGTACCAATAACGGCGCGCGCAAATTTTTGCATTACATAGTTGGTTTCGTTACCCGTACCACGCGAGGAGCCGGTCGTCTGGATGGCATCCGGACCGTACTTCTCTTTGATGGCGCTCAGGCGCTCGGCAACGTAATTCAGTGCCTCATCCCAGGAAACAGGTTCGAGTTTGCCGCCACGCTGGCGACGGATCATGGGGGTTTTCAGGCGCGGGGTC  >  CP009273/4288513‑4289010

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.