New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP009273	2127296 =	7 (0.400)	4 (0.240)	3/292	NT	31.1%	coding (1838/2163 nt)	wzc	colanic acid production tyrosine‑protein kinase; autokinase; Ugd phosphorylase
	?	CP009273	2129302 =	11 (0.660)					coding (278/444 nt)	wzb	colanic acid production protein‑tyrosine‑phosphatase; Wzc‑P dephosphorylase

GTGCCGACCAGGCGACCAATATCGATTTCATCACTGCCCGTTACCGGAGCGGCATGTTGTTTTACTTTTTCTGTCATTCTTATACCTGCTCTGCGTTCAATGCCTGCGCCCACTGGCGGGCAGACCGTTCAAGTAATGTGTACACCGCTGCAAACGTTTCCCGGCTTTTGCGATACGGATCGGGGATTTCACATTCGTTATCCCAGTGACCAAACAGCATCACTTTGCCGCGCATCTCCGGTGCCATCTCGCATAAGCGTTCGATATGGCGCTTTTCCATGGTCAAAATCAGGTCGTAGTTGCGACACAGACGGCGGCTGATTTGACGGGCACAGTGACCTTCCAGAGACAGTTGATGTTCTGCGGCGACGCTGATAGCGGTAGGATCAGCGCCCTTACCGACCAGCGCGCCGAGTCCAGCGGACTCC  >  CP009273/2129057‑2129484                                                                                                                                                                                                                                                      |                                                                                                                                                                                       gTGCCGACCAGGCGACCAATATCGATTTCATCACTGCCCGTTACCGGAGCGGCATGTTGTTTTACTTTTTCTGTCATTCTTATACCTGCTCTGCGTTCAATGCCTGCGCCCACTGGCGGGCAGACCGTTCCCGTAATGTGTACACCCCTGCAAACGTTTCCCGGCTTTTGCGATACGGATCAGGGATTTCCCCTTCGTTTTCCCCGTCACCCAACATCATCACTTTTCCGCCCATCTCCGTCGCCCCCTCGCCTACGCGTTccctctgggtctt                                                                                                                                                            >  2:280288/1‑262 (MQ=255)                                     cccGTTACCGGAGCGGCATGTTGTTTTACTTTTTCTGTCATTCTTATACCTGCTCTGCGTTCAATGCCTGCGCCCACTGGCGGGCAGACCGTTCAAGTAAAGTGTACACCGCTGCAAACGTTTCCCGGCTTTTGCGATACGGATCGGGGATTTCACATTCGTTATCCCAGTGACCAATCAGCATCACTTTGCCGCGCATCTCCGGTGCCATCTCGCATAAGCGTTCgc                                                                                                                                                                      >  1:188751/1‑227 (MQ=255)                                                                                                           cgcCCACTGGC‑GGCAGACCGTTCAAGTAATGTGTACACCGCTGCAAACGTTTCCCGGCTTTTGCGATACGGATCGGGGATTTCACATTCGTTATCCCAGTGACCAAACAGCATCACTTTGCCGCGCATCTCCGGTGCCATCTCGCATAACCGTTCGATATGGCGCTTTTCCATGGTCAAAATCAGGTCGTAGTTGCGACACAGACGGCGGCTGATTTGACGGGCACAGTGACCTTCCAGAGACAGTTGATGTTCTGCGGCGACGCTGATCGCGGt                                                >  1:272945/1‑275 (MQ=255)                                                                                                                   ggggggCAGACCGTTCAAGGAATGTGTACACCGCTGCAAACGTTTCCCGGCTTTTGCGATACGGATCGGGGATTTCACATTCGTTATCCCANTGACCAAACAGCATCACTTCGCCGCGCATCTCCGGTGCCATCTCGCATAAGCGTTCGATATGGCGCTTTTCCATGGTCAAAATCAGGTCGTAGTTGCGACACAGACGGCGGCTGATTTGACGGGCACAGTGACCTTCCAGAGACAGTTGATGTTTTGCGGCGACGCTGATAGCGGTAGGATCa                                         <  1:255062/272‑1 (MQ=255)                                                                                                                            aCCGTTCAAGTAATGTGTACACCGCTGCAAACGTTTCCCGGCTTTTGCGATACGGATCGGGGATTTCACATTCGTTATCCCAGTGACCAAACAGCATCACTTTGCCGCGCATCTCCGGTGCCATCTCGCATAAGCGTTCGATATGGCGCTTTTCCATGGTCAAAATCAGGTCGTAGTTTCGACACAGACGGCGGCTGATTTGACGGGCACAGTGACCTTCCAGAGACAGTTGATGTTCTGCGGCGACGCTGATATCGGTAGGATCAGCGCCCTTa                                >  1:31281/1‑275 (MQ=255)                                                                                                                                   aaGTAATGTGTACACCGCTGCAAACGTTTCCCGGCTTTTGCGATACGGATCAGGGATTTCACATTCGTTATCCCAGTGACCAAACAGCATCACTTTGCCGCGCATCTCCGGTGCCATCTNGCATAAGCGTTCGATATGGCGCTTTTCCATGGTCAAAATCAGGTCGTAGTTGCGACACAGACGGCGGCTGATTTGACGGGCACAGTGACCTTCCAGAGACAGTTGATGTTCTGCGGCGACGCTGATAGCGGTAGGATCAGCGCCCTTACCGa                            <  1:280299/272‑1 (MQ=255)                                                                                                                                            gtACACCGCTGCAAACGTTTCCCGGCTTTCGCGATACGGATCGGGGATTTCACATTCGTTATCCCAGTGACCAAACAGCATCACTTTGCCGCGCATCTCCGGTGCCa                                                                                                                                                                                        <  1:29508/107‑1 (MQ=255)                                                                                                                                             tACACCGCTGCAAACGTTTCCCGGCTTTTGCGATACGGATCGGGGATTTCACATTCGTTATCCCAGTGACCAAACAGCATCACTTTGCCGCGCATCTCCGGTGCCa                                                                                                                                                                                        <  2:324133/106‑1 (MQ=255)                                                                                                                                                  cGCTGCAAACGTTTCCCGGCTTTTGCGATACGGATCGGGGATTTCACATTCGTTATCCCAGTGACCAAACAGCATCACTTTGCCGCGCATCTCCGGTGCCATCTCGCATAAGCGTTCGATATGGCGCTTTTCCATGGTCAAAATCATATCGTAGTTGCNACACAGACGGCGGCTGATTTGACGGGCACAGTGACCTTCCAGAGACAGTTGATGTTCTGCGGCGACGCTGATAGCGGTAAGATCAGCGCACTAACCGACCAGCGAGCCGAGCCCa           >  1:306209/1‑274 (MQ=255)                                                                                                                                                           aggttCCCGTNTTTTGCGATACGGATCGGGGATTTGGCATTCGTTATCCCAGTGACCAAACAACCACACTTGGCCGCGCATCTCCGGTGCCATCTGGCATAAGAGTTCGGTATGGCGCTTTTCCATGGGCAAAATCGGGTCGTAGTTGGGACACAGACGGCGGCTGATTGGACGGGCTCAGTGACCTTCCAGAGACAGTTGATGTTCTGCGGCGACGCTGATAGCGGTAGGATCAGCGCCCTTACCGACCAGCGCGCCGAGTCCAGCGGACTcc  <  2:31281/271‑1 (MQ=255)                                                                                                                                                                                           tttCACATTCGTTATCCCAGTGACCAAACAGCATCACTTTGCCGCGCATCTCCGGTGCCATCTCGCATAAGCGTTCGATATGGCGCTTTTCCATGGTCAAAATCAGGTCGTAGTTGCGACACAGACGGCGGCTg                                                                                                              >  2:328077/1‑134 (MQ=255)                                                                                                                                                                                              gctgctaaaccgacctctattgccaaatttgacctgatcccgcgcggtcaggtgccATCTCGCATAAGCGTTCGATATGGCGCTTTTCCATGGTCAAAATCAGGTCGTAGTTGCGACACAGACGGCGGCTGATTTg                                                                                                         >  2:288091‑M2/57‑136 (MQ=255)                                                                                                                                                                                              gctgctaaaccgacctctattgccaaatttgacctgatcccgcgcggtcaggtgccATCACGCATAAGCGTTCGATATTGCCCTTTGCCATGGTAAAAATCAGGACGTAGTTGCGACTCAGACGGCGGCTAattc                                                                                                          >  2:299344‑M2/57‑134 (MQ=255)                                                                                                                                                                                               acaTTCGTTATCCCAGTGACCAAACAGCATCACTTTGCCGCGCATCTCCGGTGCCATCTCGCATAAGCGTTCGATATGGCGCTTTTCCATGGTCAAAATCAGGTCGTAGTTGCGACACAGACGGCGGCTGAttt                                                                                                          <  1:328089/134‑1 (MQ=255)                                                                                                                                                                                                  ctaaaccgacctctattgccaaatttgacctgatcccgcgcggtcaggtgccATCTCGCATAAGCGTTCGATATGGCGCTTTTCCATGGTCAAAATCAGGTCGTAGTTGCGACACAGACGGCGGCTGATTTGACgg                                                                                                     <  1:288102‑M2/84‑1 (MQ=255)                                                                                                                                                                                                  ctaaaccgacctatattgccaaatttgacctgatcccgcgcggtcaggtgccATCTCGCATAAGCGTTCGATATGGCGCTTTTCCATGGTCAAAATCAGGTCGTAGTTGCGACACAGACGGCGGCTAATTTGACg                                                                                                      <  1:299355‑M2/83‑1 (MQ=255)                                                                                                                                                                                                               tGACCAAACAGCATCACTTTGCCGCGCATCTCCGGTGCCATCTCGCATAAGCGTTCGATATGGCGCTTTTCCATGGTCAAAATCAGGTCGTAGTTGCGACACAGACGGCGGCTGATTTGACGGGCACAGTGACCTTCCAGAGACAGTTGATGTTCTGCGGCGACGCTGATAGCGGTAGGATCAGCGCCCTTACCGACCAgcg                      >  1:9653/1‑202 (MQ=255)                                                                                                                                                                                                                                                      |                                                                                                                                                                                       GTGCCGACCAGGCGACCAATATCGATTTCATCACTGCCCGTTACCGGAGCGGCATGTTGTTTTACTTTTTCTGTCATTCTTATACCTGCTCTGCGTTCAATGCCTGCGCCCACTGGCGGGCAGACCGTTCAAGTAATGTGTACACCGCTGCAAACGTTTCCCGGCTTTTGCGATACGGATCGGGGATTTCACATTCGTTATCCCAGTGACCAAACAGCATCACTTTGCCGCGCATCTCCGGTGCCATCTCGCATAAGCGTTCGATATGGCGCTTTTCCATGGTCAAAATCAGGTCGTAGTTGCGACACAGACGGCGGCTGATTTGACGGGCACAGTGACCTTCCAGAGACAGTTGATGTTCTGCGGCGACGCTGATAGCGGTAGGATCAGCGCCCTTACCGACCAGCGCGCCGAGTCCAGCGGACTCC  >  CP009273/2129057‑2129484

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.