New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP009273	1413126 =	35 (1.020)	12 (0.360)	6/312	1.9	24.6%	coding (199/489 nt)	sieB	Rac prophage; phage superinfection exclusion protein
	?	CP009273	1413206 =	40 (1.210)					coding (279/489 nt)	sieB	Rac prophage; phage superinfection exclusion protein

TCCATTGTTGAAACTTTTTGCTAACGAGCCACTCGAAAGACTTATGTATACGATTATCATTTTTGGTCTCACTCTCTGGCTGATACCGAAAGAGTTTACTGTCGCATTCAATGCTTATACTGAAATACCTTGGCTCTTTCAGATTATCGTTTTTGCCTTTTCTTTCGTGGTCGCCATTTCCTTCTCAAGATTGCGAGCACATATTCAAAAGCATTATTCATTACTACCAGAGCAACGAGTATTGCTTCGTTTATCTGAGAAAGAAATCGCTGTATTTAAAGATTTCCTTAAAACAGGAAATCTTATTATCACTTCTCCTTGCCGTAACCCGGTTATGAAAAAATTAGAACGGAAGGGCATCATTCAACATCAGAGTGATAGCGCAAACTGTTCTTATTATCTCGTCACCGAAAAATACTCCCATTTTATGAAGTTATTCTGGAACAGCAGGAGTAGACGTTTTAATCGTTAGCTTACTGTGTGCTTCTCCAACCATCGGCG  >  CP009273/1412945‑1413445                                                                                                                                                                                                                                                                      |                                                                                                                                                                                                                                                tCCATTGTTGAAACTTTTTGCTAACGAGCCACTCGAAAGACTTATGTATACGATTATCATTTTTGGTCTCACTCTCTGGCTGATACCGAAAGAGTTTACTGTCGCATTCAATGCTTATACTGAAATACCTTGGCTCTTTCAGATTATCGTTTTTGCCTTTTCTTTCGTGGTCGCCATTTCCTTCTCAATATTGCGAGCACATATTCAACAGCATTATTCATTACTAACAGAGCAACGAGTATTGCTTCTTTTATCTGAGAAATAAATCGATTTAt                                                                                                                                                                                                                                    >  2:574494/1‑275 (MQ=255)    aTTGTTGAAACTTTTAGCTAACGAGCCACGCGAAAGACTTATGTATACGATTATCATTTTTGGTCTCACTCTCTGGCTGATACCGAAAGAGTTTACTGTCGCATTCAATGCTTATACTGAAATACCTTGGCTCTTTCAGATTATCGTTTTTGCCTTTTCTTTCGTGGTCGCCATTTCCTTCTCNAGATTTCGAGCACATATTCAAAAGCATTATTCATTACTACCAGATCAACGAGTATTGCTTCGTTTATCTGAGAAAGAAATCGCTGTATTTa                                                                                                                                                                                                                                 >  1:474894/1‑275 (MQ=255)         taaaaTTTTTTGAAAAAGAGCAACTAGAAATACTTATGTATACGTTTATCATTTTTTGTCTCACTTTCTGGCTGATACCGAAAGAGTTTACTGTCGCATTCAATGCTTATACTGAAATACCTTGGCTCTTTCAGATTATCGTTTTTGCCTTTTCTTTCGTGGTCGCCATTTCCTTCTCAAGATTGCGAGCACATATTCAAAAGCATTATTCATTACTACCAGAGCAACGAGTATTGCTTCGTTTATCTGAGAAAGAAATCGCTGTATTTAAAGAt                                                                                                                                                                                                                            <  2:541166/273‑1 (MQ=255)            aaCTTTTTGCTAACGATCCACTCGAAAGACTTATGTATACGATTATCATTTTTGGTCTCACTCTCTGGCTGATACCGAAAGAGTTTACTGTCGCATTCAATGCTTATACTGAAATACCTTGGCTTTTTCAGATTATCGTTTTTGCCTTTTCTTTCGTGGTCGCCATTTCCTTCTCAAGATTGCGAGCACATATTCAAAAGCATTATTCATTACTACCAGAGCAACGAGTATTGCTTCGTTTATCTGAGAAAGAAAACGCTGTATTTAAAGATTTc                                                                                                                                                                                                                         <  1:560181/275‑1 (MQ=255)                                           tATGTATACGATTATCATTTTTGGTCTCACTCTCTGGCTGATACCGAAAGAGTTTACTGTCTCATTCAATGCTTATACTGAACTACCTTGGCTCTTTCAGATTAGCGTTTTTGCCTTTTCTTACGGGGTCGCCATTTCCTTCTCAAGAGTGCGAGCACATATTCACAAGCATTATGCATTACTACCATAGAAACGAGTATTGATTCGTTTATCTGAGAAAGAAATCGCTGTATTTAAAGATTTACTTAAAACGGGAAATCtgacgaacacct                                                                                                                                                                                             >  2:36811/1‑261 (MQ=255)                                                    gATTATCATTTTTGGTCTCACTCTCTGGCTGATACCGAAAGAGTTTACTGTCGCATTCAATGCTTATACTGAAATACCTTGGCTCTTTCAGATTATCGTTTTTGCCTTTTCTTTCGTGGTCGCCATTTCCTTCTCAAGATTGCGAGCACATATTCAAAAGCATTATTCATTACTACCAGAGCAACGAGTATTGCTTCGTTTATCTGAGAAAGAAATCGCTGTATTTaa                                                                                                                                                                                                                                >  2:63132/1‑228 (MQ=255)                                                                                           agagTTTACTGTCGCATTCAATGCTTATACTGAAATACCTTGGCTATTTCAGATTATCGTTTTTGCCTTTTCTTTCGTGGTCGCCATTGCCTTCTCAAGATTGCGAGCACATATTCAAAAGCATTATTCATTACTACCAGAGCCACGAGTATTGCTTCGTTTATCTGAGAAAGAAATCGCTGTATTTAAACATTTCCTTAAAACAGGAAATCTTATTATCACTTCCCCTTGCCGTAACCCGGTTATGAAAAAATTAGAACGGAAGGGCATCATTc                                                                                                                                          <  1:36812/275‑1 (MQ=255)                                                                                                                tGCTTATACTTAAATTCCTTTGTTCTTTCAGATTATATTTTTTGCCTTTTTTTTCGTGGTCGCCATTTCCTTCTCAAGATTGCGAGCACATATTCAAAAGCATTATTCATTACTACCAGAGCNAAGAGTATTGCTTCGTTTATCTGAGAAAGAAATCGCTGTATTTAAAGATTTCCTTAAAACAGGAAATCTTATTATCACTTCTCCTTGCCGTAACCCGGTTATGAAAAAATTAGAACGGAAGGGCATCATTCAACATCAGAGTAATAGCGCaa                                                                                                                     <  1:574503/275‑1 (MQ=255)                                                                                                                    tataCTGAAATACCTTGGCTCTTTCAGATTATCGTTTTTGCCTTTTCTTTCGTGGTCGCCATTTCCTTCTCAAGATTGCGAGCACATATTCAAAAGCATTATTCATTACTACCAGAGCAACGAGTATTGCTTCGTTTATCTGAgaaagaaa                                                                                                                                                                                                                                             >  1:74642/1‑151 (MQ=255)                                                                                                                        cTGAAATACCTTGGCTCTTTCAGATTATCGTTTTTGCCTTTTCTTTCGTGGTCGCCATTTCCTTCTCAAGATTGCGAGCACATATTCAAAAGCATTATTCATTACTACCAGAGCAACGAGTATTGCTTCGTTTATCTGAGAAAGAAATCGc                                                                                                                                                                                                                                         <  2:74641/151‑1 (MQ=255)                                                                                                                                 cTTGGCTCTTTCAGATTATCGTTTTTGCCTTTTCTTTCGTGGTCGCCATTTCCTTCTCAAGATTGCGAGCACATATTCAAAAGCATTATTCATTACTACCAGAGCAACGAGTATTGCTTCGTTTATCTGAGAAAGAAATCGCTGTATTTAAAGATTTCCTTAAAACAGGAAATCTTATTATCACTTCTCCTTGCCGTAACCCGGTTATGAAAAAATTAGAACGGAAGGGCATCATTCa                                                                                                                                         >  1:247808/1‑238 (MQ=255)                                                                                                                                   tGGCTCTTTCAGATTATCGTTTTTGCCTTTTCTTTCGTGGTCGCCATTTCCTTCTCAAGATTGCGAGCACATATTCAAAAGCATTATTCATTACTACCAGAGCAACGAGTATTGCTTCGTTTATCTGAGAAAGAAATCGCTGTATTTAAAGATTTCCTTAAAACAGGAAATCTTATTATCACTTCTCCTTGCCGTAACCCGGTTa                                                                                                                                                                        >  2:286432/1‑205 (MQ=255)                                                                                                                                     gCTCTTTCAGATTATCGTTTTTGCCTTTTCTTTCGTGGTCGCCATTTCCTTCTCAAGATTGCGAGCACATATTCAAAAGCATTATTCATTACTACCAGAGCAACGAGTATTGCTTCGTTTATCTGAGAAAGAAATCGCTGTATTTAAAGATTTCCTTAAAACAGGAAATCTTATTATCACTTCTCCTTGCCGTAACCCGGTTATGAAAAAATTAGAACGGAAGGGCATCATTCAACAt                                                                                                                                     <  2:247804/238‑1 (MQ=255)                                                                                                                                       tctTTCAGATTATCGTTTTTGCCTTTTCTTTCGTGGTCGCCATTTCCTTCTCAAGATTGCGAGCACATATTCAAAAGCATTATTCATTACTACCAGAGCAACGAGTATTGCTTCGTTTATCTGAGAAAGAAATCGCTGTATTTAAAGATTTCCTTAAAACAGGAAATCTTATTATCACTTCTCCTTGCCGTAACCCGGTTATGaa                                                                                                                                                                    <  1:286436/205‑1 (MQ=255)                                                                                                                                           tCAGATTATCGTTTTTGCCTTTTCTTTCGTGGTCGCCATTTCCTTCTCAAGATTGCGAGCACATATTCAAAAGCATTATTCATTACTACCAGAGCAACGAGTATTGCTTCGTTTATCTGAGAAAGAAATCGCTGTATTTaa                                                                                                                                                                                                                                >  1:423226/1‑141 (MQ=255)                                                                                                                                               aTTATCGTTTTTGCCTTTTCTTTCGTGGTCGCCATTTCCTTCTCAAGATTGCGAGCACATATTCAAAAGCATTATTCATTACTACCAGAGCAACGAGTATTGCTTCGTTTATCTGAGAAAGAAATCGCTGTATTTAAAGAt                                                                                                                                                                                                                            <  2:423222/141‑1 (MQ=255)                                                                                                                                                   tCGTTTTTGCCTTTTCTTTCGTGGTCGCCATTTCCTTCTCAAGATTGCGAGCACATATTCAAAAGCATTATTCATTACTACCAGAGCAACGAGTATTGCTTCGTTTATCTGAGAAAGAAATCGCTGTATTTAAAGATTTCCTTAAAACAGGAAATCt                                                                                                                                                                                                        >  2:66739/1‑157 (MQ=255)                                                                                                                                                       ttttGCCTTTTCTTTCGTGGTCGCCATTTCCTTCTCAAGATTGCGAGCACATATTCAAAAGCATTATTCATTACTACCAGAGCAACGAGTATTGCTTCGTTTATCTGAGAAAGAAATCGCTGTATTTAAAGATTTCCTTAAAACAGGAAATCttatt                                                                                                                                                                                                    <  1:66740/157‑1 (MQ=255)                                                                                                                                                                                                       caatactcgttgctctggtagtaatgagtaatgcttttgaatatgtgctcgcaatcttgagaaagaaa                                                                                                                                                                                                                                             >  2:34522‑M2/64‑68 (MQ=255)                                                                                                                                                                                                       caatactcgttgctctggtagtaatgaataatgcttttgaatatgtgctcgcaatcttgagaaAGAAATCGCTGTATTTAAAGATTTCCTTAAAACAGGAAATc                                                                                                                                                                                                         >  1:218492‑M2/64‑104 (MQ=255)                                                                                                                                                                                                       caatactcgttgctctggtagtaatgaataatgcttttgaatatgtgctcgcaatcttgagaaAGAAATCGCTGTATTTAAAGATTTCCTTAAAACAGGAAATCTtattat                                                                                                                                                                                                  >  2:14651‑M2/64‑111 (MQ=255)                                                                                                                                                                                                       caatactcgttgctctggtagtaatgaataatgcttttgaatatgtgctcgcaatcttgagaaAGAAATCGCTGTATTTAAAGATTTCCTTAAAACAGGAAATCTTATTATCACTTCTCCTTGCCGTAACCCGGTTATGAAAAAAt                                                                                                                                                               >  1:64463‑M2/64‑146 (MQ=255)                                                                                                                                                                                                       caatactcgttgctctggtagtaatgaataatgcttttgaatatgtgctcgcaatcttgagaaAGAAATCGCTGTATTTAAAGATTTCCTTAAAACAGGAAATCTTATTATCACTTCTCCTTGCCGTAACCCGGTTATGAAAAAAt                                                                                                                                                               >  1:258900‑M2/64‑146 (MQ=255)                                                                                                                                                                                                       caatactcgttgctctggtagtaatgaataatgcttttgaatatgtgctcgcaatcttgagaaAGAAATCGCTGTATTTAAAGATTTCCTTAAAACAGGAAATCTTATTATCACTTCTCCTTGCCGTAACCCGGTTATGAAAAAATTAGAACGGAAGGGCATCATTCAACATCaga                                                                                                                                 >  1:214163‑M2/64‑176 (MQ=255)                                                                                                                                                                                                           actcgttgctctggtagtaatgagtaatgcttttgaatatgtgctcgcaatcttgagaaAGAAATCGc                                                                                                                                                                                                                                         <  1:34523‑M2/9‑1 (MQ=255)                                                                                                                                                                                                           actcgttgctctggtagtaatgaataatgcttttgaatatgtgctcgcaatcttgataaAGAAATCGCTGTATTTAAAGATTTCCTTAAAACAGGAAATCTTATTATCACTTCTCCTTGCCGTAACCCGGTTATGAAAAAATTAGAACGGAAGGGCATCATTCAACATCAGAGTGa                                                                                                                             <  2:214161‑M2/117‑1 (MQ=255)                                                                                                                                                                                                           actcgttgctctggtagtaatgaataatgcttttgaatatgtgctcgcaatcttgagaaAGAAATCGCTGTATTTAAAGATTTCCTTAAAACAGGAAATCttat                                                                                                                                                                                                     <  2:218490‑M2/45‑1 (MQ=255)                                                                                                                                                                                                           actcgttgctctggtagtaatgaataatgcttttgaatatgtgctcgcaatcttgagaaAGAAATCGCTGTATTTAAAGATTTCCTTAAAACAGGAAATCTTATTATCACt                                                                                                                                                                                              <  1:14652‑M2/52‑1 (MQ=255)                                                                                                                                                                                                           actcgttgctctggtagtaatgaataatgcttttgaatatgtgctcgcaatcttgagaaAGAAATCGCTGTATTTAAAGATTTCCTTAAAACAGGAAATCTTATTATCACTTCTCCTTGCCGTAACCCGGTTATGAAAAAATTAGa                                                                                                                                                           <  2:64462‑M2/87‑1 (MQ=255)                                                                                                                                                                                                           actcgttgctctggtagtaatgaataatgcttttgaatatgtgctcgcaatcttgagaaAGAAATCGCTGTATTTAAAGATTTCCTTAAAACAGGAAATCTTATTATCACTTCTCCTTGCCGTAACCCGGTTATGAAAAAATTAGa                                                                                                                                                           <  2:258896‑M2/87‑1 (MQ=255)                                                                                                                                                                                                               aaaaGCATTATTCATTACTACCAGAGCAACGAGTATTGCTTCGTTTATCTGAGAAAGAAATCGCt                                                                                                                                                                                                                                        >  1:265422/1‑65 (MQ=255)                                                                                                                                                                                                                   gCATTATTCATTACTACCAGAGCAACGAGTATTGCTTCGTTTATCTGAGAAAGAAATCGCTGTAt                                                                                                                                                                                                                                    <  2:265418/65‑1 (MQ=255)                                                                                                                                                                                                                       tattCATTACTACCAGAGCAACGAGTATTGCTTCGTTTATCTGAGAAAGAAATCGCTGTATTTAAAGATTTcc                                                                                                                                                                                                                        >  1:139852/1‑73 (MQ=255)                                                                                                                                                                                                                       tattCATTACTACCAGAGCAACGAGTATTGCTTCGTTTATCTGAGAAAGAAATCGCTGTATTTAAAGATTTCCTTAAAACAGGAAATCTTATTGTCACTTCTCCTTGCCGTAACCCGGTTATGAAAAAATTAGAACGGAAGGGCATCATTCAACATCAGAGTGATAGCGCaa                                                                                                                     >  1:143229/1‑172 (MQ=255)                                                                                                                                                                                                                       tattCATTACTACCAGAGCAACGAGTATTGCTTCGTTTATCTGAGAAAGAAATCGCTGTATTTAAAGATTTCCTTAAAACAGGAAATCTTATTATCACTTCTCCTTGCCGTAACCCGGTTATGAAAAAATTAGAACGGAAGGGCATCATTCAACATCAGAGTGATAGCGCAAACTGTACTTATTAtc                                                                                                      >  1:370509/1‑187 (MQ=255)                                                                                                                                                                                                                           cATTACTACCAGAGCAACGAGTATTGCTTCGTTTATCTGAGAAAGAAATCGCTGTATTTAAAGATTTCCTTaa                                                                                                                                                                                                                    <  2:139851/73‑1 (MQ=255)                                                                                                                                                                                                                           cATTACTACCAGAGCAACGAGTATTGCTTCGTTTATCTGAGAAAGAAATCGCTGTATTTAAAGATTTCCTTAAAACAGGAAATCTTATTGTCACTTCTCCTTGCCGTAACCCGGTTATGAAAAAATTAGAACGGAAGGGCATCATTCAACATCAGAGTGATAGCGCAAACTg                                                                                                                 <  2:143228/172‑1 (MQ=255)                                                                                                                                                                                                                           cATTACTACCAGAGCAACGAGTATTGCTTCGTTTATCTGAGAAAGAAATCGCTGTATTTAAAGATTTCCTTAAAACAGGAAATCTTATTATCACTTCTCCTTGCCGTAACCCGGTTATGAAAAAATTAGAACGGAAGGGCATCATTCAACATCAGAGTGATAGCGCAAACTGTTCTTATTATCTCGt                                                                                                  <  2:370505/187‑1 (MQ=255)                                                                                                                                                                                                                              tactacCAGAGCAACGAGTATTGCTTCGTTTATCTGAgaaagaaa                                                                                                                                                                                                                                             >  1:139750/1‑45 (MQ=255)                                                                                                                                                                                                                                  acCAGAGCAACGAGTATTGCTTCGTTTATCTGAGAAAGAAATCGc                                                                                                                                                                                                                                         <  2:139749/45‑1 (MQ=255)                                                                                                                                                                                                                                   ccAGAGCAACGAGTATTGCTTCGTTTATCTGAGAAAGAAATCGCTGTATTTAAAGATTTCCTTAAAACAGGAAATCTTATTATCACTTCTCCTTGCCGTAACCCGGTTATGAAAAAATTAGAACGGAAGGGCATCATTCAACATCAGAGTGATAGCGCAAACTGTTCTTATTATCTCGTCACCGAAAAATACACCCATTTTATGAAGTTATTCTGGAACAGCAGGAGTAAAAGTTTTAATCGTTAGCTTACTGTTTGCTTCCCCAActgtatcta  >  2:57060/1‑267 (MQ=255)                                                                                                                                                                                                                                      gagCAACGAGTATTGCTTCGTTTATCTGAGAAAGAAATCGCTGTATTTAAAGATTTCCTTAAAACAGGAAATCTTATTATCACTTCTCCTTGCCGTAACCCGGTTa                                                                                                                                                                        >  2:480055/1‑106 (MQ=255)                                                                                                                                                                                                                                       agCATCGAGTATTGCTTCGTTTATCTGAGAAAGAAATCGCTGTATTTAAAGATTTCCTTAAAACAGGAAATCTTATTATCACTTCTCCTTGCCGTAACCCGGTTATGAAAAAATTAGAACGGAAGGGCATCATTCAACATCAGAGTGATAGCGCAAACTGTTCTTATTATCTCGTCACCGAAAAATACTCCCATTTTATGAAGTTATTCTGGAACAGCAGGAGTAGACGTTTTAATCGTTAGCTTACtgtg                      <  1:57061/251‑1 (MQ=255)                                                                                                                                                                                                                                          aaCGAGTATTGCTTCGTTTATCTGAGAAAGAAATCGCTGTATTTAAAGATTTCCTTAAAACAGGAAATCTTATTATCACTTCTCCTTGCCGTAACCCGGTTATGaa                                                                                                                                                                    <  1:480062/106‑1 (MQ=255)                                                                                                                                                                                                                                           aCGAGTATTGCTTCGTTTATCTGAGAAAGAAATCGCTGTATTTAAAGATTTCCTTAAAACAGGAAATc                                                                                                                                                                                                         >  2:76932/1‑68 (MQ=255)                                                                                                                                                                                                                                               gTATTGCTTCGTTTATCTGAGAAAGAAATCGCTGTATTTAAAGATTTCCTTAAAACAGGAAATCttat                                                                                                                                                                                                     <  1:76933/68‑1 (MQ=255)                                                                                                                                                                                                                                                 aTTGCTTCGTTTATCTGAGAAAGAAATCGCTGTATTTAAAGATTTCCTTAAAACAGGAAATCTTATTATCACTTCTCCTTGCCGTAACCCGGTTATGAAAAAATTAGAACGGAAGGGcat                                                                                                                                               >  1:295941/1‑120 (MQ=255)                                                                                                                                                                                                                                                     cTTCGTTTATCTGAGAAAGAAATCGCTGTATTTAAAGATTTCCTTAAAACAGGAAATCTTATTATCACTTCTCCTTGCCGTAACCCGGTTATGAAAAAATTAGAACGGAAGGGCATCAtt                                                                                                                                           <  2:295937/120‑1 (MQ=255)                                                                                                                                                                                                                                                        cGTTTATCTGAGAAAGAAATCGCTGTATTTAAAGATTTCCTTAAAACAGGAAATCTTATTATCACTTCTCCTTGCCGTAACCCGGTTATGAAAAAATTAGAACGGAAGGGCATCATTCa                                                                                                                                         >  2:269540/1‑119 (MQ=255)                                                                                                                                                                                                                                                        cGTTTATCTGAGAAAGAAATCGCTGTATTTAAAGATTTCCTTAAAACAGGAAATCTTATTATCACTTCTCCTTGCCGTAACCCGGTTATGAAAAAATTAGAACGGAAGGGCATCATTCAACATCAGAGTGATAGCGCAAACTGTTCTTATTATCTCGTCACCGaaaaa                                                                                        >  2:603899/1‑168 (MQ=255)                                                                                                                                                                                                                                                            tATCTGAGAAAGAAATCGCTGTATTTAAAGATTTCCTTAAAACAGGAAATCTTATTATCACTTCTCCTTGCCGTAACCCGGTTATGAAAAAATTAGAACGGAAGGGCATCATTCAACAt                                                                                                                                     <  1:269544/119‑1 (MQ=255)                                                                                                                                                                                                                                                            tATCTGAGAAAGAAAACGCTGTATTTAAAGATTTCCTTAAAACAGGAAATCTTATTATCACTTCTCCTTGCCGTAACCCGGTTATGAAAAAATTAGAACGGAAGGGCATCATTCAACATCAGAGTGATAGCGCAAACTGTTCTTATTATCTCGTCACCGAAAAATACt                                                                                    <  1:603908/168‑1 (MQ=255)                                                                                                                                                                                                                                                                      |                                                                                                                                                                                                                                                TCCATTGTTGAAACTTTTTGCTAACGAGCCACTCGAAAGACTTATGTATACGATTATCATTTTTGGTCTCACTCTCTGGCTGATACCGAAAGAGTTTACTGTCGCATTCAATGCTTATACTGAAATACCTTGGCTCTTTCAGATTATCGTTTTTGCCTTTTCTTTCGTGGTCGCCATTTCCTTCTCAAGATTGCGAGCACATATTCAAAAGCATTATTCATTACTACCAGAGCAACGAGTATTGCTTCGTTTATCTGAGAAAGAAATCGCTGTATTTAAAGATTTCCTTAAAACAGGAAATCTTATTATCACTTCTCCTTGCCGTAACCCGGTTATGAAAAAATTAGAACGGAAGGGCATCATTCAACATCAGAGTGATAGCGCAAACTGTTCTTATTATCTCGTCACCGAAAAATACTCCCATTTTATGAAGTTATTCTGGAACAGCAGGAGTAGACGTTTTAATCGTTAGCTTACTGTGTGCTTCTCCAACCATCGGCG  >  CP009273/1412945‑1413445

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.