New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | CP009273 | 3295917 = | 34 (1.230) | 4 (0.150) | 3/262 | NT | 8.6% | coding (70/879 nt) | yhbV | U32 peptidase family protein |
? | CP009273 | 3296701 = | 53 (2.010) | coding (854/879 nt) | yhbV | U32 peptidase family protein |
GCTTACCACTCCCGGCGAGCGATTTTGCCATCTCCAGCCAGTCGCCAACTTTGGTTGCCCGACGCTTGCTGCATACCGCTTCACCAAGATAAATCACGTCGGCGCTGCTGGTGGCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP009273/3296034‑3295917 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcggcTGGCAGGACTGGAGCTGCAAGCCTAAGTAAATAGCTCACT > CP009273/3296701‑3296740 GCTTACCACTCCCGGCGAGCGATTTTGCCATCTCCAGCCAGTCGCCAACTTTGGTTGCCCGACGCTTGCTGCATACCGCTTCACCAAGATAAATCACGTCGGCGCTGCTGGTGGCGGCTGGCAGGACTGGAGCTGCAAGCCTAAGTAAATAGCT > 2:179750/1‑154 ACCACTCCCGGCGAGCGATTTTGCCATCTCCAGCCAGTCGCCAACTTTGGTTGCCCGACGCTTGCTGCATACCGCTTCACCAAGATAAATCACGTCGGCGCTGCTGGTGGCGGCTGGCAGGACTGGAGCTGCAAGCCTAAGTAAATAGCTCACT < 1:179751/154‑1 CCGGCGAGCGATTTTGCCATCTCCAGCCAGTCGCCAACTTTGGTTGCCCGACGCTTGCTGCATACCGCTTCACCAAGATAAATCACGTCGGCGCTGCTGGTGGCGGCTGGCAGGACTGGAGCTGCAAGCCTAAGTAAATAGCT > 2:307527/1‑143 CGAGCGATTTTGCCATCTCCAGCCAGTCGCCAACTTTGGTTGCCCGACGCTTGCTGCATACCGCTTCACCAAGATAAATCACGTCGGCGCTGCTGGTGGCGGCTGGCAGGACTGGAGCTGCAAGCCTAAGTAAATAGCTCACT < 1:307531/143‑1 GCTTACCACTCCCGGCGAGCGATTTTGCCATCTCCAGCCAGTCGCCAACTTTGGTTGCCCGACGCTTGCTGCATACCGCTTCACCAAGATAAATCACGTCGGCGCTGCTGGTGGCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP009273/3296034‑3295917 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcggcTGGCAGGACTGGAGCTGCAAGCCTAAGTAAATAGCTCACT > CP009273/3296701‑3296740 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |