New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP009273	= 4625452	40 (1.450)	7 (0.260)	4/264	NT	16.4%	coding (115/474 nt)	creA	putative periplasmic protein
	?	CP009273	= 4625504	33 (1.240)					coding (167/474 nt)	creA	putative periplasmic protein

CAGTGTTTTTTTCTTAGTAGAGTATGTTTTAGGGCTTGACGGAAATAAAAGTATTGAGATTTTGTTCTTAATCAATATGTTATTTACCGTGACGAACTAATTGCTCGTGTAATAGATAAAAATGGTAACAATATGAAATACAAGCATTTGATCCTGTCTTTAAGCCTGATAATGCTGGGGCCATTGGCTCATGCAGAAGAGATTGGTTCGGTCGACACCGTATTTAAAATGATCGGCCCGGATCACAAAATTGTTGTGGAAGCCTTTGATGATCCCGATGTGAAAAATGTCACCTGTTATGTGAGCCGGGCGAAAACCGGTGGTATTAAAGGGGGATTGGGTCTGGCGGAAGATACCTCCGATGCGGCCATTTCTTGTCAGCAAGTCGGGCCGATTGAACTGTCGGATCGTATTAAAAACGGCAAAGCTCAGGGCGAGGTAGTATTCAAAAAACGCACGTCCCTGGTCTTTAAGTCGTTACAGGTCGTGCGCTTTTATGATGCCAAACGCAACGCGCTC  >  CP009273/4625206‑4625724                                                                                                                                                                                                                                                       |                                                                                                                                                                                                                                                                                 cAGTGTTTTTTTCTTAGTAGAGTATGTTTTAGGGCTTGACGGAAATAAAAGTATTGAGATTTTGTTCTTAATCAATATGTTATTTACCGTGACGAACTAATTGCTCGTGTAATAGATAAAAATGGTAACAATATGAAATACAAGCATTTGATNCTGTCTTTAAGCCTGATAATGCTGGGGCCATTGGCTCATGCAGAAGAGATTGGTTCGGTCGACACCGTATTTAAAATGATCGGCCCGGATCACAtaaaaggtgacatttttcacatcgg                                                                                                                                                                                                                                                         >  1:473589‑M1/1‑247 (MQ=255)              ttattaGTGTATGTTTTAGGGCTTGACTGAATTAAAAGTATTGAGATTTTGTTCTTAATCAATATGTTATTTACTGTTACGAACTAATTGCNCGTGTAATAGATAAAAATGGTAACAATATGAAATACAAGCATTTGTTCCTGTCTTTACGCCTGATAATGCTGGGGCCATTGGCTCATGCAGAAGAGATTGGTTCGGTCGACACCGTATTTAAAATGATCGGCCCGGATCACAtaacaggtgacatttttcacatcgggatcatcaaaggcttc                                                                                                                                                                                                                                         <  1:435705‑M1/275‑42 (MQ=255)              taattagagtaTTTTTTAGGTCTTGACTGAAATAAAAGTATTGAGATTTTTTTCTTAATCAATATGTTATTTACCGTGACGAACTAATTGCTCTTGTAATAGATAAAAATGGTAACAATATGAAATACAAGCATTTGATCCTGTCTTTAAGCCTGATAATGCTGGGGCCATTGGCTCATGCAGAAGAGATTGGTTCGGTCGACACCGTATTTAAAATGATCGGCCCGGATCACAtaacaggtgacatttttcacatcgggatcatcaaaggcttc                                                                                                                                                                                                                                         <  2:473582‑M1/271‑42 (MQ=255)                            tttAGGGCTTGACGGAAATAAAAGTATTGAGATTATGTTCTTAATCAATATGTTATTTACCGTGACGAACTAATTGCTCGTGTAATAGATAAAAATGGTAACAATATGAAATACAAGCATTTGATCCTGTCTTTAAGCCTGATAATGCTGGGGCCATTGGCTCATGCAGAGGAGATTGGTTCGNTCGACACCNTATTTAAAATGATCGGCCCGGATCACAAAATTGTTGTGGAAGCCTTTGATGATCCCGATGTGAAAAATGACACCTGTTAtg                                                                                                                                                                                                                            <  1:375314‑M2/274‑3 (MQ=255)                                                              ttGTTTTTAATCAATATTTTATTTACCTTGACGAACTAATTGCTCGTGTAATAGATAAAAATGGTAACAATATGAAATACAAGCATTTGATCCTGTCTTTAAGCCTGATAATGCTGGGGCCATTGGCTCATGCAGAAGAGATTGGTTCGGTCGACACCGTATTTAAAATGATCGGCCCGGATCACAAAATTGTTGTGGAAGCCTTTGATGATCCCGATGTGAAAAATGTCACCTGTTATGTGAGCCGGGCGAAAACCGGTGGTATTAAAGGGGGa                                                                                                                                                                                         <  1:271137/275‑1 (MQ=255)                                                               ttttCTTTATCATTATTTTATTTACCGTGACGAACTAATTGTTTGTTTAATAGATAAAAATGGTAACAAGATGAAATACAAGCATTTGATCCTGTCTTTAAGCCTGATAATGCTGGGGCCATTGGCTCATGCAGAAGCGATTGGTTCGGTCGACACCGTATTTAAAATGATCGGCCCGGATCACAAAATGGTTGTGGAAGCCTTTGATGATCCCGATGTGAAAAATGTCACCTGTTATGTGAGCCGGGCGAAAACCGGTGGTATTAAAGGGGGAt                                                                                                                                                                                        <  1:250764/273‑1 (MQ=255)                                                                           atatGTTATTTACCTTGACGAACTAATTGCTCGTGTAATAGATAAAAATGGTAACAATATGAAATACAAGCATTTGATCTGGTCTTTAAGCCTGATAATGCTGGTGCCATTGGCTCATGCAGAAGAGATTGGTTCGGTCGACACCGTATTTAAAATGATCGGCCCGGATCACAAAATTGTTGTGGAAGCCTTTGATGATCCCGATGTGAAAAATGTCACCTGTTATGTGAGCCGGGCGAAAACCGGTGGTATTAAAGGGGGATTGGGTCTGGCgg                                                                                                                                                                            <  1:226826/275‑1 (MQ=255)                                                                                  aTTTACCGTGACGAACTAATTGCTCGTGTAATAGATAAAAATGGTAACAATATGAAATACAAGCATTTGATCCTGTCTTTAAGCCTGATAATGCTGGGGCCATTGGCTCATGCAGAAGAGATTGGTTCGGTCGACACCGTATTTAAAATGATCGGCCCGGATCACAAAATTGTTGTGGAAGCCTTTGATGATCCCGATGTGaaaa                                                                                                                                                                                                                                           >  2:199932/1‑205 (MQ=255)                                                                                   tttACCGTGACGAACTAATTGCTCGTGTAATAGATAAAAATGGTAACAATATGAAATACAAGCATTTGATCCTGTCTTTAAGCCTGATAATGCTGGGGCCATTGGCTCATGCAGAAGAGATTGGTTCGGTCGACACCGTATTTAAAATGATCGGCCCGGATCACAAAAttgttg                                                                                                                                                                                                                                                                         >  2:230199/1‑174 (MQ=255)                                                                                      aCCGTGACGAACTAATTGCTCGTGTAATAGATAAAAATGGTAACAATATGAAATACAAGCATTTGATCCTGTCTTTAAGCCTGATAATGCTGGGGCCATTGGCTCATGCAGAAGAGATTGGTTCGGTCGACACCGTATTTAAAATGATCGGCCCGGATCACAAAATTGTTGTGGAAGCCTTTGATGATCCCGATGTGAAAAATGt                                                                                                                                                                                                                                       <  1:199934/205‑1 (MQ=255)                                                                                      aCCGTGACGAACTAATTGCTCGTGTAATAGATAAAAATGGTAACAATATGAAATACAAGCATTTGATCCTGTCTTTAAGCCTGATAATGCTGGGGCCATTGGCTCATGCAGAAGAGATTGGTTCGGGCGACAACGTATTTAAAATGATCGGCCAGGATCACAAAATTGTTGTGGAAGCCTTTGATGATACCTAGTAGAAAAATGGCACCTGTTATGTGAGCCGGGCAAAAACCGGTGGAATTAAAGGGGGGTGGTGTCTGGTGGGATATAACTcg                                                                                                                                                                 >  2:11683/1‑274 (MQ=255)                                                                                       ccGTGACGAACTAATTGCTCGTGTAATAGATAAAAATGGTAACAATATGAAATACAAGCATTTGATCCTGTCTTTAAGCCTGATAATGCTGGGGCCATTGGCTCATGCAGAAGAGATTGGTTCGGTCGACACCGTATTTAAAATGATCGGCCCGGATCACAAAATTGTTGTGGa                                                                                                                                                                                                                                                                     <  1:230201/174‑1 (MQ=255)                                                                                          tGACGAACTAATTGATCGTGTAATAGATAAAAATGGTAACAATATGAAATACAAGCATTTGATCCTGTCTTTAAGCCTGATAATGCTGGGGCCATTGGCTCATGCAGAAGAGATTGGTTCGGTCGACACCGTATTTAAAATGATCGGCCCGGATCACAAAATTGTTGTGGAAGCCTTTGATGATCCCGATGTGAAAAATGTCACCTGTTATGTGAGCCGGGCGAAACCCGGTGGTATTAAAGGGGGAGTGGGTCTGGCGGAAGATACCTCCGCTg                                                                                                                                                             >  2:501083/1‑275 (MQ=255)                                                                                                          cGTGTAATAGATAAAAATGGTAACAATATGAAATACAAGCATTTGATCCTGTCTTTAAGCCTGATAATGCTGGGGCCATTGGCTCATGCAGAAGAGATTGGTTCGGTCGACACCGTATTTAAAATGATCGGCCCGGATCACAAAATTGTTGTGGAAGCCTTTGATGATCCCGATGTGAAAAATGTc                                                                                                                                                                                                                                      >  1:499496/1‑186 (MQ=255)                                                                                                              tAATAGATAAAAATGGTAACAATATGAAATACAAGCATTTGATCCTGTCTTTAAGCCTGATAATGCTGGGGCCATTGGCTCATGCAGAAGAGATTGGTTCGGTCGACACCGTATTTAAAATGATCGGCCCGGATCACAAAATTGTTGTGGAAGCCTTTGATGATCCCGATGTGAAAAATGTCACCt                                                                                                                                                                                                                                  <  2:499489/186‑1 (MQ=255)                                                                                                                   gATAAAAATGGTAACAATATGAAATACAAGCATTTGTTCCTGTCTTTAAGCCGGATAATGCTGGGGCCATTGGCTCATGCAGAAGAGATTGGTTCGGTCGACACCGTATTTAAAATGATCGGTCCGGAGCACAAAATTGTTGTGGAAGCCTTTGATGATCCCGATGTGAAAAATGTCACCTGTTATGTGAGCCGGGCGAAAACCGGTGGTATTAAAGGGGGATTGGGTCTGGCGGAAGATACCTCCGATGCGGCCATTTCTTGTCAGCAAGTCgg                                                                                                                                    <  1:501090/275‑1 (MQ=255)                                                                                                                             gTAACAATATGAAATACAAGCATTTGATCCTGTCTTTAAGCCTGATAATGCTGGGGCCATTGGCTCATGCAGAAGAGATTGGTTCGGTCGACACCGTATTTAAAATGATCGGCCCGGATCACAAAATTGTTGTGGAAGCCTTTGATGATCCCGATGTGAAAAATGTCACCTGTTATGTGAGCCGGGCGAAAACCGGGGGTATTAAAGGGGGCTTGGGTCTGGCGGAAGATACCTCCGATGCGGCCATTTCTTTTCAGCAAGTCGGGcccctggaa                                                                                                                          >  2:66994/1‑268 (MQ=255)                                                                                                                                  aaTATGAAATACAAGCATTTGATCCTGTCTTTAAGCCTGATAATGCTGGGGCCATTGGCTCATGCAGAAGAGATTGGTTCGGTCGANACCGTATTTAAAATGATCGGCCCGGATCACAAAATTGTTGTGGAAGCCTTTGATGATCCCGATGTGAAAAATGTCACCTGTTATGTGAGCCGGGCGAAAACCGGTGGTATTAAAGGGGGATTGGGTCTGGCGGAAGATACCTCCGATGCGGCCACTTCTCGTCAGCACGTCGGGCCGATTGaa                                                                                                                          <  1:405395/270‑1 (MQ=255)                                                                                                                                              aaGCATTTGATCCTGTCTTTAAGCCTGATAATGCTGGGGCCATTGGCTCATGCAGAAGAGATTGGTTCGGTCGACACCGTATTTAAAATGATCGGCCCGGATCACAAAATTGTTGTGGAAGCCTTTGATGATCCCGATGTGAAAAATGTCACCTGTTATGTGAGCCGGGCGAAAACCGGGGGTATTAAAGGGGGATTGGGTCTGGCGGAAGATACCTCCGATGGGGCCATTGCTTGGCAGCAAGTCGGGCCGATAGAACAGTCGGAACGTATTaa                                                                                                         >  1:350352/1‑275 (MQ=255)                                                                                                                                                gCATTTGATCCTGTCTTTAAGCCTGATAATGCTGGGGCCATTGGCTCATGCAGAAGAGATTGGTTCGGTCGACACCGTATTTAAAATGATCGGCCCGGATCACAAAATTGTTGTGGAAGCCTTTGATGATCCCGATGTGAAAAATGTCACCTGTTATGTGAGCCGGGCGAAAACCGGTGGTATTAAAGGGGGATTGGGTCTGGCGGAAGATACCTCCGATGCGGCCATTTCTTGTCAGCAAGTCGGGCCGATTGAACTGTCGGATCGTATTaaaa                                                                                                       >  1:175202/1‑275 (MQ=255)                                                                                                                                                        tCCTGTCTTTAAGCCTGATAATGCTGGGGCCATTGGCTCATGCAGAAGAGATTGGTTCGGTCGACACCGTATTTAAAATGATCGGCCCGGATCACAtaacaggtgacatttttcacatcgggatcatcaaagg                                                                                                                                                                                                                                             >  1:279889‑M1/1‑96 (MQ=255)                                                                                                                                                            gTCTTTAAGCCTGATAATGCTGGGGCCATTGGCTCATGCAGAAGAGATTGGTTCGGTCGACACCGTATTTAAAATGATCGGCCCGGATCACAtaacaggtgacatttttcacatcgggatcatcaaaggcttc                                                                                                                                                                                                                                         <  2:279886‑M1/133‑42 (MQ=255)                                                                                                                                                                ttAAGCCTGATAATGCTGGGGCCATTGGCTCATGCAGAAGAGATTGGTTCGGTCGACACCGTATTTAAAATGATCGGCCCGGATCACAAAATTGTTGTGGAAGCCTTTGATGATCCCGATGTGAAAAATGTCACCTGTTATGTGAGCCGGGCGAAAACCGGTGGTATTAAAGGGGGATTGGGTCTGGCGGAAGATACCTCCGATGCGGCCATTTCTTGTCAGCAAGTCGGGCCGATTGAACTGTCGGATCGTATTAAAAACGGCAAAGCTCAggg                                                                                       <  2:175201/275‑1 (MQ=255)                                                                                                                                                                    gCCTGATAATGCTGGGGCCATTGGCTCATGCAGAAGAGATTGGTTCGGTCGACACCGTATTTAAAATGATCGGCCCGGATCACAAAAttgttg                                                                                                                                                                                                                                                                         >  1:565116/1‑93 (MQ=255)                                                                                                                                                                      cTGATAATGCTGGGGCCATTGGCTCATGCAGAAGAGATTGGTTCGGTCGACACCGTATTTAAAATGATCGGCCCGGATCACAtaacaggtgacatttttcacatcgggatcatcaaagg                                                                                                                                                                                                                                             >  1:141916‑M1/1‑82 (MQ=255)                                                                                                                                                                       tGATAATGCTGGGGCCATTGGCTCATGCAGAAGAGATTGGTTCGGTCGACACCGTATTTAAAATGATCGGCCCGGATCACAAAATTGTTGTGGAAGCCTTTGATGATCCCGATGTGAAAAATGTCACCTGTTATGTGAGCCg                                                                                                                                                                                                                     >  1:299208/1‑142 (MQ=255)                                                                                                                                                                        gATAATGCTGGGGCCATTGGCTCATGCAGAAGAGATTGGTTCGGTCGACACCGTATTTAAAATGATCGGCCCGGATCACAAAATTGTTGTGGa                                                                                                                                                                                                                                                                     <  2:565108/93‑1 (MQ=255)                                                                                                                                                                          tAATGCTGGGGCCATTGGCTCATGCAGAAGAGATTGGTTCGGTCGACACCGTATTTAAAATGATCGGCCCGGATCACAtaacaggtgacatttttcacatcgggatcatcaaaggcttc                                                                                                                                                                                                                                         <  2:141915‑M1/119‑42 (MQ=255)                                                                                                                                                                           aaTGCTGGGGCCATTGGCTCATGCAGAAGAGATTGGTTCGGTCGACACCGTATTTAAAATGATCGGCCCGGATCACAAAATTGTTGTGGAAGCCTTTGATGATCCCGATGTGAAAAATGTCACCTGTTATGTGAGCCGGGCg                                                                                                                                                                                                                 <  2:299204/142‑1 (MQ=255)                                                                                                                                                                               cTGGGGCCATTGGCTAATGCACAAGAGAGTGGTTCGGTCGACACCGTATTTAAAATGATCGGCCCGGATCACAAAATTGTTGTGGAAGCCTTTGATGATCCCGATGTGAAAAATGTCACCTGTTATGTGAGCCGGGCGAAAACCGGTGGTATTAAAGGGGGATTGGGTCTGGc                                                                                                                                                                              >  1:396044/1‑173 (MQ=255)                                                                                                                                                                                  gggCCATTGGCTCATGCAGAAGAGATTGGTTCGGTCGACACCGTATTTAAAATGATCGGCCCGGATCACAAAATTGTTGTGGAAGCCTTTgatgat                                                                                                                                                                                                                                                        >  2:494856/1‑96 (MQ=255)                                                                                                                                                                                   ggCCATTGGCTCATGCAGAAGAGATTGTGTCGGTAGACACCGTATTTAAAATGATCGGCCCGGATCACAAAATTGTTGTGGAAGCCTTTGATGATCCCGGTGTGAAAAATGGCATATGTTATGTGAGTCGGGCGAAAGCCGGTGGTACTAAAGGGGGATTGGGTCTGGCGGaa                                                                                                                                                                          <  2:396038/173‑1 (MQ=255)                                                                                                                                                                                      cATTGGCTCATGCAGAAGAGATTGGTTCGGTCGACACCGTATTTAAAATGATCGGCCCGGATCACAAAATTGTTGTGGAAGCCTTTGATGATCCCg                                                                                                                                                                                                                                                    <  1:494863/96‑1 (MQ=255)                                                                                                                                                                                      cATTGGCTCATGCAGAAGAGATTGGTTCGGTCGACACCGTATTTAAAATGATCGGCCCGGATCACAAAATTGTTGTGGAAGCCTTTGATGATCCCGATGTGAAAAATGTCACCTGTTATGTGAGCCGGGCGAAAACCGGTGGTATTAAAGGGGGATTGGGTCTGGCGGAAGATACCTCCGATGCGGCCATTTCTTGTCAGCAAGTCGGGCCGATTGAACTGTCCGAGCGCATTAAAAACGGCAAAGCCCAGGGCGCAGTAGTACTCAAAAAAcaa                                                                 >  1:172899/1‑273 (MQ=255)                                                                                                                                                                                       aTTGGCTCATGCAGAAGAGATTGGTTCGGTCGACACCGTATTTAAAATTATCGGCCCGGATCACAAAATTGTTGTGGAAGCCTTTGATGATCCCGATGTGAAAAATGTCACCTGTTATGTGAGCCGGGCGAAAACCGGTGGTATTAAAGGGGGATTGGGTCTGGCGGAAGATACCTCCGATGCGGCCATTTCTTGTCAGCAAGTCGGGCCGATTGAACTGTCGGAt                                                                                                                 <  1:300064/226‑1 (MQ=255)                                                                                                                                                                                        ttGGCTCATGCAGAAGAGATTGGTTCGGTCGACACCGTATTTAAAATGATCGGCCCGGATCACAAAATTGTTGTGGAAGCCTTTGATGATCCCGATGTGAAAAATGTCACCTGTTATGTGAGCCGGGCGAAAACCGGTGGTATTAAAGGGGGATTGGGTCTGGCGGAAGATACCTCCGATGCGGCCATTTCTTGTCAGCAAGTCGGGCCGATTGAACTGTCGGATCGTATTAAAAACGGCAAAGATCAGGGCGAGGTAGTATTCAAAAAACGCAc                                                               >  1:233091/1‑275 (MQ=255)                                                                                                                                                                                                     aagaGATTGGTTCGGTCGACACCGTATTTAAAATGATCGGCCCGGATCACAAAATTGTTGTGGAAGCCTTTGATGATCCCGATGTGAAAAATGTCACCTGTTATGTGAGCCGGGCGAAAACCGGTGGTATTAAAGGGGGATTGGGTCTGGCGGAAGATACCTCCGATGCGGCCATTTCTTGTCAGCAAGTCGGGCCGCTTGAACTGTCGGAGCGTATTAAAAACGGCAAAGCCCAGGGGGGGGGAGTATTCAAAAAACGGACGTCCCCGGTCtta                                                  >  2:8664/1‑274 (MQ=255)                                                                                                                                                                                                         gaTTGGTTCGGTCGACACCGTATTTAAAATGATCGGCCCGGATCACAAAATTGTTGTGGAAGCCTTTGATGATCCCGATGTGAAAAATGTCACCTGTTATGTGAGCCGGGCGAAAACCGGTGGTATTAAAGGGGGATTGGGTCTGGCGGAAGATACCTCCGATGCGGCCATTTCTTGTCAGCAAGTCGGGCCGATTGAACTGTCGGATCGTATTAAAAACGGCAAAGCTCAGGGCGAGGTAGTATTCAAAAAACGCACGTCCCTGGTCTTTAAg                                               <  1:8664/274‑1 (MQ=255)                                                                                                                                                                                                          aTTGGTTCGGTCGACACCGTATTTAAAATGATCGGCCCGGATCACAAAATTGTTGTGGAAGCCTTTGATGATCCCGATGTGaa                                                                                                                                                                                                                                             >  2:261929/1‑83 (MQ=255)                                                                                                                                                                                                              gTTCGGTCGACACCGTATTTAAAATGATCGGCCCGGATCACAAAATTGTTGTGGAAGCCTTTGATGATCCCGATGTGAAAAAt                                                                                                                                                                                                                                         <  1:261931/83‑1 (MQ=255)                                                                                                                                                                                                               ttCGGTCGACACCGTATTTAAAATGATCGGCCCGGATCACAAAATTGTTGTGGAAGCCTTTGATGATCCCGATGTGAAAAATGTCACCTGTTATGTGAGCCGGGCGAAAACCGGTGGTATTAAAGGGGGATTGGGTCTg                                                                                                                                                                                >  2:493201/1‑139 (MQ=255)                                                                                                                                                                                                               ttCGGTCGACACCGTATTTAAAATGATCGGCCCGGATCACAAAATTGTTGTGGAAGCCTTTGATGATCCCGATGTGAAAAATGTCACCTGTTATGTGAGCCGGGCGAAAACCGGTGGTATTAAAGGGGGATTGGGTCTGGCGGAAGATACCTCCGATGCGGCCATTTCTTGTCAGCAAGTCGGGCCGATTGAACTGTCGGATCGTATTAAAAACGGCAAAGc                                                                                             >  1:344149/1‑222 (MQ=255)                                                                                                                                                                                                                   gTCGACACCGTATTTAAAATGATCGGCCCGGATCACAAAATTGTTGTGGAAGCCTTTGATGATCCCGATGTGAAAAATGTCACCTGTTATGTGAGCCGGGCGAAAACCGGTGGTATTAAAGGGGGATTGGGTCTGGCgg                                                                                                                                                                            <  1:493208/139‑1 (MQ=255)                                                                                                                                                                                                                                 tAAAATGATCGTCCCGGATCACAAAATTGTTGTGGAAGCCTTTGATGATCCCGATGTGAAAAATGTCCCCTGTTATGTGAGCCGGGCTAAAACCTGTGGTATTAAAGGGGGTTTGGGTCTGGCGGAAGATACCGCCGATGCTGCCAGTTCTTGGCAGCAAGTCGGGCTGATTGAACTGTCGGATCGTATTAAAAACGGCAAAGCTCAGGGCGAGGTAGTATTCAAAAAACGCACGTCCCTGGTCTTTAAGTCGTTACAGGTCGTg                                <  1:317118/265‑1 (MQ=255)                                                                                                                                                                                                                                         tCGGCCCGGATCACAAAATTGTTGTGGAAGCCTTTGATGATCCCGAtgtg                                                                                                                                                                                                                                               >  2:156949/1‑50 (MQ=255)                                                                                                                                                                                                                                         tCGGCCCGGATCACAAAATTGTTGTGGAAGCCTTTGATGATCCCGATGTGAAAAATGTCACCTGTTATGTGAGCCGGGCGAAAACCGGTGGTAtt                                                                                                                                                                                                  >  1:82304/1‑95 (MQ=255)                                                                                                                                                                                                                                             cccGGATCACAAAATTGTTGTGGAAGCCTTTGATGATCCCGATGTGaaaa                                                                                                                                                                                                                                           <  1:156950/50‑1 (MQ=255)                                                                                                                                                                                                                                             cccGGATCACAAAATTGTTGTGGAAGCCTTTGATGATCCCGATGTGAAAAATGTCACCTGTTATGTGAGCCGGGCGAAAACCGGTGGTATTAAAg                                                                                                                                                                                              <  2:82304/95‑1 (MQ=255)                                                                                                                                                                                                                                                      cataacaggtgtcatttttcacatcgggatcatcaaaggcttccacaacaattttgtgatccgggccgatcattttaaatanggtgtcgancgaaccaatctcctctgcatgagccaatggccccagcattatcaggcttaaagacaggatcaaatgcttgtatttcatattgttaccatttttatctattacacgagcaattagttcgtcacggtaaataacatattgattaagaacataatctcaatacttttatttccgtcaagccctaaa  <  1:375314‑M1/274‑273 (MQ=255)                                                                                                                                                                                                                                                       aaaaTTGTTGTGGAAGGCTTTGATGATCACGATGTGAAAAATGTCACCTGTTATGTGAGCCGGGCGAAAACCGGTGGTATTAAAGGGGGATTGGGTCTGGCgg                                                                                                                                                                            >  1:428036/1‑103 (MQ=255)                                                                                                                                                                                                                                                       aaaaTTGTTGTGGAAGCCTTTGATGATCCCGATGTGAAAAATGTCACCTGTTATGTGAGCCGGGCGAAAACCGGTGGTAtt                                                                                                                                                                                                  >  2:516806/1‑81 (MQ=255)                                                                                                                                                                                                                                                       |                                                                                                                                                                                                                                                                                 CAGTGTTTTTTTCTTAGTAGAGTATGTTTTAGGGCTTGACGGAAATAAAAGTATTGAGATTTTGTTCTTAATCAATATGTTATTTACCGTGACGAACTAATTGCTCGTGTAATAGATAAAAATGGTAACAATATGAAATACAAGCATTTGATCCTGTCTTTAAGCCTGATAATGCTGGGGCCATTGGCTCATGCAGAAGAGATTGGTTCGGTCGACACCGTATTTAAAATGATCGGCCCGGATCACAAAATTGTTGTGGAAGCCTTTGATGATCCCGATGTGAAAAATGTCACCTGTTATGTGAGCCGGGCGAAAACCGGTGGTATTAAAGGGGGATTGGGTCTGGCGGAAGATACCTCCGATGCGGCCATTTCTTGTCAGCAAGTCGGGCCGATTGAACTGTCGGATCGTATTAAAAACGGCAAAGCTCAGGGCGAGGTAGTATTCAAAAAACGCACGTCCCTGGTCTTTAAGTCGTTACAGGTCGTGCGCTTTTATGATGCCAAACGCAACGCGCTC  >  CP009273/4625206‑4625724

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.