New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP009273	4055568 =	92 (2.390)	24 (0.660)	4/296	NT	30.2%	intergenic (+63/‑39)	yihM/yihN	putative sugar phosphate isomerase/MFS transporter family protein
	?	CP009273	4056112 =	24 (0.660)					coding (506/1266 nt)	yihN	MFS transporter family protein

TGAGAATGACATGGTGTATCTGCGCGGTAGTTTATCGGCAAAATAAATAGACAGAAAAAAGCCCACTGTGGTGACAAATGAGTTTACCGACATAGCATTACCAATTTGACCATTGGTCAAATGGAAATATTCCTGCATCGGGATATAAAACGCATCTTTCAGCGACGGTAATTTATAAATTGTACCGCCACACAGTGTTAATAGACTAAATAACGCCCATTTCTTTTTCGTGAGCATAACATCCCCTAAGCGATTTTTAAAATCACTGTTTTAAAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  CP009273/4055843‑4055568 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gttttaaagCAGGCATCTGGTTCTATTCCCTTATTGTGATTGCCGTAGGCATTATTATTTTCTTTGTCCTGAATGACAAAGAAGAGGCACCGTCCGTTGAGGTGAAAAAAGAAGACGGAGCATCGAAAAACACCAGTATGACCTCGGTGCTGAAAGACAAAACTATCTGGCTTATCGCTTTTAACGTCTTCTTCGTTTACGCGGTTTACTGTGGCCTGACATTCTTCATTCCATTCCTGAAAAACATCTATCTATTGCCCGTTGCGCTGGTGGGGGCT  >  CP009273/4056112‑4056380                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   TGAGAATGACATGGTGTATCTGCGCGGTAGTTTATCGGCAAAATAAATAGACAGAAAAAAGCCCACTGTGGTGACAAATGAGTTTACCGACATAGCATTACCAATTTGACCATTGGTCAAATGGAAATATTCCTGCATCGGGATATAAAACGCATCTTTCAGCGACGGTAATTTATAAATTGTACCGCCACACAGTGTTAATAGACTAAATAACGCCCATTTCTTTTTCGTGAGCATAACATCCCCTAAGCGATTTTTAAAATCACTGTTTTAAA                                                                                                                                                                                                                                                                                <  1:172828/275‑1                                            nAAANAAAAAGAAAAAAGACTACTGTGGTGACAAATGAGTTTACCGAAATAGCATTACCAATTTGACCATTGGTCAAATGGAAATATTCCTGCATCGGGATATAAAACGCATCTTTCAGCGACGGTAATTTATAAATTGTACCGCCACACAGTGTTAATAGACTAAATAACGCCCATTTCTTTTTCGTGAGCATAACATCCCCTAAGCGATTTTTAAAATCACTGTTTTAAAGCAGGCATCTGGTTCTATTCCCTTATTGTGATTGCCGTAGGCA                                                                                                                                                                                                                                     <  2:613/274‑1                                            aAAATAGACAGAAAAAAGCCCACTGTGGTGACAAATGAGTTTACCGACATAGCATTACCAATTTGACCATTGGTCAAATGGAAATATTCCTGCAACGGGATATAAAACGCATCTTTCAGCGACGGTAATTTATAAATTGTACCGCCAAACAGTGTTAATAGACTAAATAACGCCCATTTCTTTTTCGTGAGCATAACATCCCCTAAGCGATTTTTAAAATCACTGTTTTAAAGCAGGCATCTGGTTCTATTCCCTTATTGTGATTGCCGTAGGCA                                                                                                                                                                                                                                     <  2:600778/274‑1                                                                                                                              AATATTCCTGCATCGGGATATAAAACGCATCTTTCAGCGACGGTAATTTATAAATTGTACCGCCACACAGTGTTAATAGACTAAATAACGCCCATTTCTTTTTCGTGAGCATAACATCCCCTAAGCGATTTTTAAAATCACTGT                                                                                                                                                                                                                                                                                      >  1:469631/1‑144                                                                                                                                  TTCCTGCATCGGGATATAAAACGCATCTTTCAGCGACGGTAATTTATAAATTGTACCGCCACACAGTGTTAATAGACTAAATAACGCCCATTTCTTTTTCGTGAGCATAACATCCCCTAAGCGATTTTTAAAATCACTGTTTTA                                                                                                                                                                                                                                                                                  <  2:469624/144‑1                                                                                                                                          TCGGGATATAAAACGCATCTTTCAGCGAGGGTAATTTATAAATTGTCCCGCCACACAGTGTTCATAGACTAAATAACGCCCATTTCTTTTTCGTGAGCATAACATCCCCTAAGCGATTTTTAAAATCACTGTTTTAAAGCAGGCATCTGGTTCTATTCCCTTATTGTGATTGCCGTA                                                                                                                                                                                                                                         >  1:510564/1‑177                                                                                                                                          TCGGGATATAAAACGCATCTTTCAGCGACGGTAATTTATAAATTGTACCGCCACACAGTGTTAATAGACTAAATAACGCCCATTTCTTTTTCGTGAGCATAACATCCCCTAAGCGATTTTTAAAATCACTGTTTTAAAGCAGGCATCTGGTTCTATTCCCTTATTGTGATTGCCGTA                                                                                                                                                                                                                                         >  1:31618/1‑177                                                                                                                                          TCGGGATATAAAACGCATCTTTCAGCGACGGTAATTTATAAATTGTACCGCCACACAGTGTTAATAGACTAAATAACGCCCATTTCTTTTTCGTGAGCATAACATCCCCTAAGCGATTTTTAAAATCACTGTTTTAAAGCAGGCATCTGGTTCTATTCCCTTATTGTGATTGCCGTA                                                                                                                                                                                                                                         >  1:635827/1‑177                                                                                                                                          TCGGGATATAAAACGCATCTTTCAGCGACGGTAATTTATAAATTGTACCGCCACACAGTGTTAATAGACTAAATAACGCCCATTTCTTTTTCGTGAGCATAACATCCCCTAAGCGATTTTTAAAATCACTGTTTTAAAGCAGGCATCTGGTTCTATTCCCTTATTGTGATTGCCGTA                                                                                                                                                                                                                                         >  2:137338/1‑177                                                                                                                                              GATATAAAACGCATCTTTCAGCGACGGTAATTTATAAATTGTACCGCCACACAGTGTTAATAGACTAAATAACGCCCATTTCTTTTTCGTGAGCATAACATCCCCTAAGCGATTTTTAAAATCACTGTTTTAAAGCAGGCATCTGGTTCTATTCCCTTATTGTGATTGCCGTAGGCA                                                                                                                                                                                                                                     <  2:635818/177‑1                                                                                                                                              GATATAAAACGCATCTTTCAGCGACGGTAATTTATAAATTGTACCGCCACACAGTGTTAATAGACTAAATAACGCCCATTTCTTTTTCGTGAGCATAACATCCCCTAAGCGATTTTTAAAATCACTGTTTTAAAGCAGGCATCTGGTTCTATTCCCTTATTGTGATTGCCGTAGGCA                                                                                                                                                                                                                                     <  1:137339/177‑1                                                                                                                                              GATATAAAACGCATCTTTCAGCGACGGTAATTTATAAATTGTACCGCCACACAGTGTTAATAGACTAAATAACGCCCATTTCTTTTTCGTGAGCATAACATCCCCTAAGCGATTTTTAAAATCACTGTTTTAAAGCAGGCATCTGGTTCTATTCCCTTATTGTGATTGCCGTAGGCA                                                                                                                                                                                                                                     <  2:31618/177‑1                                                                                                                                              GATATAAAACGCAGCTGTCAGCGACGGTAATGTATAAATTGTACCGCCACACAGTGTTAATAGACTAAATAACGCCCATTTCTTTGTCGTGAGCATAACATCCCCTAAGCGATGTTTAAAATCACTGTTTTAAAGCAGGCATCTGGTTCTATTCCCTTATTGTGATTGCCGTAGGCA                                                                                                                                                                                                                                     <  2:510557/177‑1                                                                                                                                                                                   ATTGTACCGCCACACAGTGTTAATAGACTAAATAACGCCCATTTCTTTTTCGTGAGCATAACATCCCCTAAGCGATTTTTAAAATCACTGT                                                                                                                                                                                                                                                                                      >  2:378237/1‑91                                                                                                                                                                                       TACCGCCACACAGTGTTAATAGACTAAATAACGCCCATTTCTTTTTCGTGAGCATAACATCCCCTAAGCGATTTTTAAAATCACTGTTTTA                                                                                                                                                                                                                                                                                  <  1:378243/91‑1                                                                                                                                                                                                              CTAAATAACGCCCATTTCTTTTTCGTGAGCATAACATCCCCTAAGCGATTTTTAAAATCACTGTTTTAAAGCAGGCATCTGGTTCTATTCCCTTATTGTGATTGCCGTA                                                                                                                                                                                                                                         >  2:93204/1‑109                                                                                                                                                                                                              CTAAATAACGCCCATTTCTTTTTCGTGAGCATAACATCCCCTAAGCGATTTTTAAAATCACTGTTTTAAAGCAGGCATCTGGTTCTATTCCCTTATTGTGATTGCCGTA                                                                                                                                                                                                                                         >  2:392078/1‑109                                                                                                                                                                                                              CTAAATAACGCCCATTTCTTTTTCGTGAGCATAACATCCCCTAAGCGATTTTTAAAATCACTGTTTTAAAGCAGGCATCTGGTTCTATTCCCTTATTGTGATTGCCGTA                                                                                                                                                                                                                                         >  2:376863/1‑109                                                                                                                                                                                                              CTAAATAACGCCCATTTCTTTTTCGTGAGCATAACATCCCCTAAGCGATTTTTAAAATCACTGTTTTAAAGCAGGCATCTGGTTCTATTCCCTTATTGTGATTGCCGTA                                                                                                                                                                                                                                         >  1:520074/1‑109                                                                                                                                                                                                              CTAAATAACGCCCATTTCTTTTTCGTGAGCATAACATCCCCTAAGCGATTTTTAAAATCACTGTTTTAAAGCAGGCATCTGGTTCTATTCCCTTATTGTGATTGCCGTA                                                                                                                                                                                                                                         >  1:27179/1‑109                                                                                                                                                                                                              CTAAATAACGCCCATTTCTTTTTCGTGAGCATAACATCCCCTAAGCGATTTTTAAAATCACTGTTTTAAAGCAGGCATCTGGTTCTATTCCCTTATTGTGATTGCCGTA                                                                                                                                                                                                                                         >  1:22391/1‑109                                                                                                                                                                                                              CTAAATAACGCCCATTTCTTTTTCGTGAGCATAACATCCCCTAAGCGATTTTTAAAATCACTGTTTTAAAGCAGGCATCTGGTTCTATTCCCTTATTGTGATTGCCG                                                                                                                                                                                                                                           >  1:39255/1‑107                                                                                                                                                                                                              CTAAATAACGCCCATTTCTTTTTCGTGAGCATAACATCCCCTAAGCGATTTTTAAAATCACTGTTTTA                                                                                                                                                                                                                                                                                  >  1:390961/1‑68                                                                                                                                                                                                              CTAAATAACGCCCATTTCTTTTTCGTGAGCATAACATCCCCTAAGCGATTTTTAAAATCACTGTTTTA                                                                                                                                                                                                                                                                                  >  2:511071/1‑68                                                                                                                                                                                                                AAATAACGCCCATTTCTTTTTCGTGAGCATAACATCCCCTAAGCGATTTTTAAAATCACTGTTTTA                                                                                                                                                                                                                                                                                  >  1:290525/1‑66                                                                                                                                                                                                                  ATAACGCCCATTTCTTTTTCGTGAGCATAACATCCCCTAAGCGATTTTTAAAATCACTGTTTTAAAGCAGGCATCTGGTTCTATTCCCTTATTGTGATTGCCGTAGGCA                                                                                                                                                                                                                                     <  2:22391/109‑1                                                                                                                                                                                                                  ATAACGCCCATTTCTTTTTCGTGAGCATAACATCCCCTAAGCGATTTTTAAAATCACTGTTTTAAAGCAGGCATCTGGTTCTATTCCCTTATTGTGATTGCCGTAGGCA                                                                                                                                                                                                                                     <  2:27179/109‑1                                                                                                                                                                                                                  ATAACGCCCATTTCTTTTTCGTGAGCATAACATCCCCTAAGCGATTTTTAAAATCACTGTTTTAAAGCAGGCATCTGGTTCTATTCCCTTATTGTGATTGCCGTAGGCA                                                                                                                                                                                                                                     <  1:93205/109‑1                                                                                                                                                                                                                  ATAACGCCCATTTCTTTTTCGTGAGCATAACATCCCCTAAGCGATTTTTAAAATCACTGTTTTAAAGCAGGCATCTGGTTCTATTCCCTTATTGTGATTGCCGTAGGCA                                                                                                                                                                                                                                     <  1:392084/109‑1                                                                                                                                                                                                                  ATAACGCCCATTTCTTTTTCGTGAGCATAACATCCCCTAAGCGATTTTTAAAATCACTGTTTTAAAGCAGGCATCTGGTTCTATTCCCTTATTGTGATTGCCGTAGGCA                                                                                                                                                                                                                                     <  2:520067/109‑1                                                                                                                                                                                                                  ATAACGCCCATTTCTTTTTCGTGAGCATAACATCCCCTAAGCGATTTTTAAAATCACTGTTTTAAAGCAGGCATCTGGTTCTATTCCCTTATTGTGATTGCCGTAGGCA                                                                                                                                                                                                                                     <  1:376869/109‑1                                                                                                                                                                                                                  ATAACGCCCATTTCTTTTTCGTGAGCATAACATCCCCTAAGCGATTTTTAAAATCACTGTTTTAAAGCAGGCATCTGGTTCTATTCCCTTATTGTGATTGCCGTAGG                                                                                                                                                                                                                                       <  2:39255/107‑1                                                                                                                                                                                                                                                                                TAAAGCAGGCATCTGGTTCTATTCCCTTTTTGTGATTGCCGTAGGCATTATTATTTTCTTTGTCCTGAATGACAAAGAAGAGGCACCGTCCGTTGAGGTGAAAAAAGAAGACGGAGCATCGAAAAACACCAGTATGACCTCGGTGCTGAAAGACAAAACTATCTGGCTTATCGCTTTTAACGTCTTCTTCGTTTACGCGGTTTACTGTGGCCTGACATTCTTCATTCCATTCCTGAAAAACATCTACCTATTGCCCGTTGCGCTGGTGGGGGCT  <  1:424357/274‑1                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   TGAGAATGACATGGTGTATCTGCGCGGTAGTTTATCGGCAAAATAAATAGACAGAAAAAAGCCCACTGTGGTGACAAATGAGTTTACCGACATAGCATTACCAATTTGACCATTGGTCAAATGGAAATATTCCTGCATCGGGATATAAAACGCATCTTTCAGCGACGGTAATTTATAAATTGTACCGCCACACAGTGTTAATAGACTAAATAACGCCCATTTCTTTTTCGTGAGCATAACATCCCCTAAGCGATTTTTAAAATCACTGTTTTAAAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  CP009273/4055843‑4055568 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gttttaaagCAGGCATCTGGTTCTATTCCCTTATTGTGATTGCCGTAGGCATTATTATTTTCTTTGTCCTGAATGACAAAGAAGAGGCACCGTCCGTTGAGGTGAAAAAAGAAGACGGAGCATCGAAAAACACCAGTATGACCTCGGTGCTGAAAGACAAAACTATCTGGCTTATCGCTTTTAACGTCTTCTTCGTTTACGCGGTTTACTGTGGCCTGACATTCTTCATTCCATTCCTGAAAAACATCTATCTATTGCCCGTTGCGCTGGTGGGGGCT  >  CP009273/4056112‑4056380

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.