New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? CP009273 4055568 =92 (2.390)24 (0.660) 4/296 NT 30.2% intergenic (+63/‑39) yihM/yihN putative sugar phosphate isomerase/MFS transporter family protein
?CP009273 4056112 = 24 (0.660)coding (506/1266 nt) yihN MFS transporter family protein

Only 100 of 123 total aligned reads displayed.

TACTATGCGCCGGCGTTCCGCTTTGAAGACGAAGATGATAATCCGTGGATCCCTTATCGCCAGATGAGTGAAACACCATTGCCAGAAAATCATTTACTGGATGCGCGGTTACGTAAAGAAAAAGAAGATGCAATTAATCAGATAAATCATGTGCGTAACGTACTACAACAAATCAAACAAGAGGCAAACCATCTTCTGAACCACTAATAAGTTTTAACTCATACGCAGTTAATAAAACCATTCCATATGAATGGTCGGTATCTTATTGCCTTTAAAACAGTGATTTTAAAAATCGCTTAGGGGATGTTATGCTCACGAAAAAGAAATGGGCGTTATTTAGTCTATTAACACTGTGTGGCGGTACAATTTATAAATTACCGTCGCTGAAAGATGCGTTTTATATCCCGATGCAGGAATATTTCCATTTGACCAATGGTCAAATTGGTAATGCTATGTCGGTAAACTCATTTGTCACCACAGTGGGCTTTTTTCTGTCTATTTATTTTGCCGATAAACTACCGCGCAGATACACCATGTCATT  >  CP009273/4055299‑4055839
                                                                                                                                                                                                                                                                             |                                                                                                                                                                                                                                                                               
agcccccaccagcgcaacgggcaataggtagatgtttttcaggaatggaatgaagaatgtcaggccacagtaaaccgcgtaaacgaagaagacgttaaaagcgataagccagatagttttgtctttcagcaccgaggtcatactggtgtttttcgatgctccgtcttcttttttcacctcaacggacggtgcctcttctttgtcattcaggacaaagaaaataataatgcctacggcaatcacaaaaagggaatagaaccagatgcctgCTTTa                                                                                                                                                                                                                                                                             <  1:424357‑M1/5‑1 (MQ=255)
                              gAAGATGATAATCCGTGGATCCCTTATCGCCAGATGAGTGAAACACCATTGCCAGAAAATCATTTACTGGATGCGCGGTTACGTAAAGAAAAAGAAGATGCAATTAATCAGATAAATCATGTGCGTAACGTACTACAACAAATCAAACAAGAGGCAAACCATCTTCTGAACCACTAATAAGTTTTAACTCATACGCAGTTAATAAAACCATTCCATATGAATGGTCGGTATCTTATTGCCTTTAAAACAGTGATTTTAAAAATCGCTTAGGGGAt                                                                                                                                                                                                                                              >  1:142478/1‑275 (MQ=255)
                                                                                                                      aaaaagaaGATGCAATTAATCAGATAAATCATGTGCGTAACGTACTACAACAAATCAAACAAGAGGCAAACCATCTTCTGAACCACTAATAAGTTTTAACTCATACGCAGTTAATAAAACCATTCCATATGAATGGTCGTTATCTTATTGCCTTTAAAACAGTGATTTTAAAAATCGCTTAGGGGATGTTATGCTCACGAAAAAGAAATGGGCGTTAt                                                                                                                                                                                                               >  1:614011/1‑218 (MQ=255)
                                                                                                                      aaaaagaaGATGCAATTAATCAGATAAATCATGTGCGTAACGTACTACAACAAATCAAACAAGAGGCAAACCATCTTCTGAACCACTAATAAGTTTTAACTCATACGCAGTTAATAAAACCATTCCATATGAATGGTCGGTATCTTATTGCCTTTAAAACAGTGATTTTAAAAATCGCTTAGGGGCTGTTATGCTCAAGAAAAAGAAATGGTCGATATTTAGt                                                                                                                                                                                                          >  2:295561/1‑223 (MQ=255)
                                                                                                                      aaaaagaaGATGCAATTAATCAGATAAATCATGTGCGTAACGTACTACAACAAATCAAACAAGAGGCAAACCATCTTCTGAACCACTAATAAGTTTTAACTCATACGCAGTTAATAAAACCATTCCATATGAATGGTCGGTATCTTATTGCCTTTAAAACAGTGATTTTAAAAATCGCTTAGGGGATGTTATGCt                                                                                                                                                                                                                                      >  2:26517/1‑195 (MQ=255)
                                                                                                                          agaagaTGCAATTAATCAGATAAATCATGTGCGTAACGTACTACAACAAATCAAACAAGAGGCAAACCATCTTCTGAACCACTAATAAGTTTTAACTCATACGCAGTTAATAAAACCATTCCATATGAATGGTCGGTATCTTATTGCCTTTAAAACAGTGATTTTAAAAATCGCTTAGGGGATGTTATGCTCACg                                                                                                                                                                                                                                  <  1:26517/195‑1 (MQ=255)
                                                                                                                          agaagaTGCAATTAATCAGATAAATCATGTGCGTAACGTACTACAACAAATCAAACAAGAGGCAAACCATCTTCTGAACCACTAATAAGTTTTAACTCATACGCAGTTAATAAAACCATTCCATATGAATGGTCGGTATCTTATTGCCTTTAAAACAGTGATTTTAAAAATCGCTTAGGGGATGTTATGCTCACGAAAAAGAAATGGGCGTTATTTAg                                                                                                                                                                                                           <  2:614002/218‑1 (MQ=255)
                                                                                                                                tGCAATTAATCAGATAAATCATGTGCGTAACGTACTACAACAAATCAAACAAGAGGCAAACCATCTTCTGAACCACTAATAAGTTTTAACTCATACGCAGTTAATAAAACCATTCCATATGAATGGTCGGTATCTTATTGCCTTTAAAACAGTGATTTTAAAACTCGCTTAGGGGATGTTATGCTCACGAAAAAGAAATGGGCGtt                                                                                                                                                                                                                 >  2:357212/1‑206 (MQ=255)
                                                                                                                                    aTTAATCAGATAAATCATGTGCGTAACGTACTACAACAAATCAAACAAGAGGCAAACCATCTTCTGAACCACTAATAAGTTTTAACTCATACGCAGTTAATAAAACCATTCCATATGAATGGTCGGTATCTTATTGCCTTTAAAACAGTGATTTTAAAAATCGCTTAGGGGATGTTATGCTCACGAAAAAGAAATGGGCGTTAttt                                                                                                                                                                                                             <  1:357218/206‑1 (MQ=255)
                                                                                                                                        ataaGATAAATAATGTGCGTAACAAATTACAACAAATAAAACAAGAGGAAAACCATCTTCTGAACTACTAATAAGTTTTAACTCATACGCAGTTAATAAAACCATTCCATATGAATGGTCGGTATCTTATTGCCTTTAAAACAGTGATTTTAAAAATCGCTTAGGGGATGTTATGCTCACGAAAAAGAAATGGGCGTTATTTAGTCTATTAACACTGTGTGGCGGTACAATTTATAAATTACCGTCGCTGAAAGATGCGTTTTATATCCCGATGc                                                                                                                                    <  2:496049/272‑1 (MQ=255)
                                                                                                                                             aTAAATCATGTGCGTAACGTACTACAACAAATCAAACAAGAGGCAAACCATCTTCTGAACCACTAATAAGTTTTAACTCATACGCAGTTAATAAAACCATTCCATATGAATGGTCGGTATCTTATTGCCTTTAAAACAGTGATTTTAAAAATCGCTTAGGGGATGTTATGCTCACGAAAAAGAAATGGGCGTTATTTAGTCTATTAACACTGTGTGGCGGTACAATTTATAAATTACCGTCGCTGAAAGATGCGTTTTATATCCCGATGCAGGa                                                                                                                                >  2:164223/1‑274 (MQ=255)
                                                                                                                                                aaTCATGTGCGTAACGTACTACAACAAATCAAACAAGAGGCAAACCATCTTCTGAACCACTAATAAGTTTTAACTCATACGCAGTTAATAAAACCATTCCATATGAATGGTCGGTATCTTATTGCCTTTAAAACAGTGATTTTAAAAATCGCTTAGGGGATGTTATGCTCACGAAAAAGAAATGGGc                                                                                                                                                                                                                    <  1:681521/187‑1 (MQ=255)
                                                                                                                                                       tgCGTAACGTACTACAACAAATCAAACAAGAGGCAAACCATCTTCTGAACCACTAATAAGTTTTAACTCATACGCAGTTAATAAAACCATTCCATATGAATGGTCGGTATCTTATTGCCTTTAAAACAGTGATTTTAAAAATCGCTTAGGGGATGTTATGCTCACGAAAAAGAAATGGGCGTTAt                                                                                                                                                                                                               >  1:313364/1‑185 (MQ=255)
                                                                                                                                                         cGTAACGTACTACAACAAATCAAACAAGAGGCAAACCATCTTCTGAACCACTAATAAGTTTTAACTCATACGCAGTTAATAAAACCATTCCATATGAATGGTCGGTATCTTATTGCCTTTAAAACAGTGATTTTAAAAATCGCTTAGGGGATGTTATGCTCACGAAAAAGAAATGGGCGTTATTTAGTCTATTAACACTGTGTGGCGGTACAATTTATAAATTACCGTCGCTGAAAGATGCGTTTTATATCCCGATGCAGGAATATTTCCATTTg                                                                                                                   >  1:279870/1‑275 (MQ=255)
                                                                                                                                                         cGTAACGTACTACAACAAATCAAACAAGAGGCAAACCATCTTCTGAACCACTAATAAGTTTTAACTCATACGCAGTTAATAAAACCATTCCATATGAATGGTCGGTATCTTATTGCCTTTAAAACAGTGATTTTAAAAATCGCTTAGGGGATGTTATGCTCACGAAAAAGAAATGGGCGTTATTTAGTCTATTAACACTGTGTGGCGGTACAATTTATAAATTACCGTCGCTGAAAGATGCGTTTTATACTCCGATGCAGTAAAATTTCCAttta                                                                                                                   >  2:45332/1‑274 (MQ=255)
                                                                                                                                                             atgTACTACNACAAATCAAACAAGAGGCAAACAATCTTCTGAACCACTAATTAGTTTTAACTCATACGCAGTTAATTAAACCATTCCATATGAATGGTCGGTATCTTATTGCCTTTAAAACAGTGATTTTAAAAATCGCTTAGGGGATGTTATGCTCACGAAAAAGAAATGTGCGTTATTTAGTCTATTAACACTGTGTGGCGGTACAATTTATAAATTACCGTCGCTGAAAGATGCGTTTTATATCCCGATGCAGGAATATTTCCATTTGACCa                                                                                                               <  2:279865/273‑1 (MQ=255)
                                                                                                                                                                   tacAACAAATCAAACAAGAGGCAAACCATCTTCTGAACCACTAATAAGTTTTAACTCATACGCAGTTAATAAAACCATTCCATATGAATGGTCGGTATCTTATTGCCTTTAAAACAGTGATTTTAAAAATCGCTTAGGGGATGTTATGCTCACGAAAAAGAAATGGGCGtt                                                                                                                                                                                                                 >  2:285930/1‑171 (MQ=255)
                                                                                                                                                                      aacaaATCAAACAAGAGGCAAACCATCTTCTGAACCACTAATAAGTTTTAACTCATACGCAGTTAATAAAACCATTCCATATGAATGGTCGGTATCTTATTGCCTTTAAAACAGTGATTTTAAAAATCGCTTAGGGGATGTTATGCTCACGAAAAAGAAATGGGCGTTATTTAGTCTATTAACNCTGTGTGGCGGTACAATTTATAAATTACCGTCGCTGAAAGATGCGTTTTATATCCCGATGCAGGAATATTTCCATTTAACCAATGGTCaaa                                                                                                      >  1:554092/1‑275 (MQ=255)
                                                                                                                                                                       acaaATCAAACAAGAGGCAAACCATCTTCTGAACCACTAATAAGTTTTAACTCATACGCAGTTAATAAAACCATTCCATATGAATGGTCGGTATCTTATTGCCTTTAAAACAGTGATTTTAAAAATCGCTTAGGGGATGTTATGCTCACGAAAAAGAAATGGGCGTTAttt                                                                                                                                                                                                             <  1:285935/171‑1 (MQ=255)
                                                                                                                                                                        caaATCAAACAAGAGGCAAACCATCTTCTGAACCACTAATAAGTTTTAACTCATACGCAGTTAATAAAACCATTCCATATGAATGGTCGGTATCTTATTGCCt                                                                                                                                                                                                                                                                                >  2:545280/1‑103 (MQ=255)
                                                                                                                                                                          aaTCAAACAAGAGGCAAACCATCTTCTGAACCACTAATAAGTTTTAACTCATACGCAGTTAATAAAACCATTCCATATGAATGGTCGGTATCTTATTGCCTTTAAAACAGTGATTTTAAAAATCGCTTAGGGGATGTTATGCTCACGAAAAAGAAATGGGCGTTATTTAGTCTATTAACACTGTGTGGCGGTACAATTTATAAATTACCGTCGCTGAAAGATGCGTTTTATATCCCGATGCAGGaa                                                                                                                               >  2:297527/1‑246 (MQ=255)
                                                                                                                                                                            tCAAACAAGAGGCAAACCATCTTCTGAACCACTAATAAGTTTTAACTCATACGCAGTTAATAAAACCATTCCATCTGAATGGTCGGTATCTTATTGCCTTTaa                                                                                                                                                                                                                                                                            <  1:545289/103‑1 (MQ=255)
                                                                                                                                                                              aaaCAAGAGGCAAACCATCTTCTGAACCACTAATAAGTTTTAACTCATACGCAGTTAATAAAACCATTCCATATGAATGGTCGGTATCTTATTGCCTTTAAAACAGTGATTTTAAAAATCGCTTAGGGGATGTTATGCTCACGAAAAAGAAATGGGCGTTATTTAGTCTATTAACACTGTGTGGCGGTACAATTTATAAATTACCGTCGCTGAAAGATGCGTTTTATATCCCGATGCAGGAATAtt                                                                                                                           <  1:297533/246‑1 (MQ=255)
                                                                                                                                                                               aaCAAGAGGCAAACCATCTTCTGAACCACTAATAAGTTTTAACTCATACGCAGTTAATAAAACCATTCCATATGAATGGTCGGTATCTTATTGCCTTTAAAACAGTGATTTTAAAAATCGCTTAGGGGATGTTATGCTCACGAAAAAGAAATGGGCGTTATTTAg                                                                                                                                                                                                           <  2:54065/165‑1 (MQ=255)
                                                                                                                                                                                   agagGCAAACCATCTTCTGAACCACTAATAAGTTTTAACTCATACGCAGTTAATAAAACCATTCCATATGAATGGTCGGTATCTTATTGCCTTTAAAACAGTGATTTTAAAAATCGCTTAGGGGATGTTATGCTCACGAAAAAGAAATGGGCGTTATTTAg                                                                                                                                                                                                           <  1:604990/161‑1 (MQ=255)
                                                                                                                                                                                   agagGCAAACCATCTTCTGAACCACTAATAAGTTTTAACTCATACGCAGTTAATAAAACCATTCCATATGAATGGTCGGTATCTTATTGCCTTTAAAACAGTGATTTTAAAAATCGCTTAGGGGATGTTATAATCAGTACAAAGAGATGGGCGTTATTTAg                                                                                                                                                                                                           <  1:491839/161‑1 (MQ=255)
                                                                                                                                                                                    gagGCAAACCATCTTCTGAACCACTAATAAGTTTTAACTCATACGCAGTTAATAAAACCATTCCATATGAATGGTCGGTATCTTATTGCCTTTAAAACAGTGATTTTAAAAATCGCTTAGGGGATGTTATGCTCACGAAAAAGAAATGGGCGTTATTTAGTCTATTAACACTGTGTGGCGGTANAATTTATAAATTACCGTCGCTGAAAGATGCGTTTTATATCCCGATGCAGGAATATTTCCATTTGACCAATgg                                                                                                           >  1:522287/1‑256 (MQ=255)
                                                                                                                                                                                     agGCAAACCATCTTCTGAACCACTAATAAGTTTTAACTCATACGCAGTTAATAAAACCATTCCATATGAATGGTCGGTATCTTATTGCCTTTAAAACAGTGATTTTAAAAATc                                                                                                                                                                                                                                                         >  1:707683/1‑113 (MQ=255)
                                                                                                                                                                                         aaaCCATCTTCTGAACCACTAATAAGTTTTAACTCATACGCAGTTAATAAAACCATTCCATATGAATGGTCGGTATCTTATTGCCTTTAAAACAGTGATTTTAAAAATCGCtt                                                                                                                                                                                                                                                     <  2:707673/113‑1 (MQ=255)
                                                                                                                                                                                         aaaCCATCTTCTGAACCACTAATAAGTTTTAACTCATACGCAGTTAATAAAACCATTCCATATGAATGGTCGGTATCTTATTGCCTTTAAAACAGTGATTTTAAAAATCGCTTAGGGGATGTTATGCTCACGAAAAAGAAATGGGCGTTATTTAGTCTATTAACACTGTGTGGCGGTACAATTTATAAATTACCGTCGCTGAAAGATGCGTTTTATATCCCGATGCAGGAATATTTCCATTTGACCAATGGTCAAATTg                                                                                                   <  2:662381/259‑1 (MQ=255)
                                                                                                                                                                                         aaaCCATCTTCTGAACCACTAATAAGTTCTAACTCATACGCAGTTAATAAAACCATTCCATATGAATGGTCGGTATCTTATTGCCTTTAAAACAGTGATTTTAAAAATCGCTTAGGGGATGTTATGCTCACGAAAAAGAAATGGGCGTTAt                                                                                                                                                                                                               >  1:489528/1‑151 (MQ=255)
                                                                                                                                                                                             cATCTTCTGAACCACTAATAAGTTTTAACTCATACGCAGTTAATAAAACCATTCCATATGAATGGTCGGTATCTTATTGCCTTTAAAACAGTGATTTTAAAAATCGCTTAGGGGATGTTATGCTCACGAAAAAGAAATGGGCGTTATTTAg                                                                                                                                                                                                           <  2:489521/151‑1 (MQ=255)
                                                                                                                                                                                                    tcaccccctcataaGTTTTAACTCATACTCAGTTAATAAAACCATTCCCTATGAATGGTTGGTATCTTATTGCCTTTAAAACAGTGATTTTAAAAATCGCTTAGGGGATGTTATGCTCACGAAAAAGAAATGTGCGTTATTTAGTCTATTAACACTGTGTGGCGGTACAATTTATAAATTACCGTCGCTGAAAGATGCGTGTTATATCCCGACGCAGGAATATTTCCCTTTTTCAAATGGTCAAATTGGTAATGCTATGTCGGTAAACTCAtt                                                                          <  2:83103/263‑1 (MQ=255)
                                                                                                                                                                                                      aaCCACTAATAAGTTTTAACTCATACGCAGTTAATAAAACCATTCCATATGAATGGTCGGTATCTTATTGCCTTTAAAACAGTGATTTTAAAAATCGCTTAGGGGATGTTATGCTCACGAAAAAGAAATGGGCGTTAt                                                                                                                                                                                                               >  2:625847/1‑138 (MQ=255)
                                                                                                                                                                                                          aCTAATAAGTTTTAACTCATACGCAGTTAATAAAACCATTCCATATGAATGGTCGGTATCTTATTGCCTTTAAAACAGTGATTTTAAAAATCGCTTAGGGGATGTTATGCTCACGAAAAAGAAATGGGCGTTATTTAg                                                                                                                                                                                                           <  1:2760/138‑1 (MQ=255)
                                                                                                                                                                                                           cTAATAAGTTTTAACTCATACGCAGTTAATAAAACCATTCCATATGAATGGTCGGTATCTTATTGCCTTTAAAACAGTGATTTTAAAAATCGCTTAGGGGATGTTATGCTCACGAAAAAGAAATGGGCGTTAt                                                                                                                                                                                                               >  1:694626/1‑133 (MQ=255)
                                                                                                                                                                                                           cTAATAAGTTTTAACTCATACGCAGTTAATAAAACCATTCCATATGAATGGTCGGTATCTTATTGCCTTTAAAACAGTGATTTTAAAAATCGCTTAGGGGATGTTATGCTCACGAAAAAGAAATGGGCGTTAt                                                                                                                                                                                                               >  2:452219/1‑133 (MQ=255)
                                                                                                                                                                                                               taaGTTTTAACTCATACGCAGTTAATAAAACCATTCCATATGAATGGTCGGTATCTTATTGCCTTTAAAACAGTGATTTTAAAAATCGCTTAGGGGATGTTATGCTCACGAAAAAGAAATGGGCGTTATTTAg                                                                                                                                                                                                           <  2:694617/133‑1 (MQ=255)
                                                                                                                                                                                                               taaGTTTTAACTCATACGCAGTTAATAAAACCATTCCATATGAATGGTCGGTATCTTATTGCCTTTAAAACAGTGATTTTAAAAATCGCTTAGGGGATGTTATGCTCACGAAAAAGAAATGGGCGTTATTTAg                                                                                                                                                                                                           <  1:452226/133‑1 (MQ=255)
                                                                                                                                                                                                                      tAACTCATACGCAGTTAATAAAACCATTCCATATGAATGGTCGGTATCTTATTGCCTTTAAAACAGTGATTTTAAAAATCGCTTAGGGGATGTTATGCTCACGAAAAAGAAATGGGCGTTATTTAGTCTATTAACACTGTGTGGCGGTACAATTTATAAATTACCGTCGCTGAAAg                                                                                                                                                         >  1:240332/1‑176 (MQ=255)
                                                                                                                                                                                                                          tCATACGCAGTTAATAAAACCATTCCATATGAATGGTCGGTATCTTATTGCCTTTAAAACAGTGATTTTAAAAATCGCTTAGGGGATGTTATGCTCACGAAAAAGAAATGGGCGTTATTTAGTCTATTAACACTGTGTGGCGGTACAATTTATAAATTACCGTCGCTGAAAGATGc                                                                                                                                                     <  2:240327/176‑1 (MQ=255)
                                                                                                                                                                                                                            aTACGCAGTTAATAAAACCATTCCATATGAATGGTCGGTATCTTATTGCCTTTAAAACAGTGATTTTAAAAATCGCTTAGGGGATGTTATGCTCACGAAAAAGAAATGGGCGTTATTTAGTCTATTAACACTGTGTGGCGGTACAATTTATAAATTACCGTCGCTGAAAGATGCGTTTTATATCCCGATGCAGGAATATTTCCATTTGACCAATGGTCaaa                                                                                                      >  2:655612/1‑221 (MQ=255)
                                                                                                                                                                                                                             tACGCAGTTAATAAAACCATTCCATATGAATGGTCGGTATCTTATTGCCTTTAAAACAGTGATTTTAAAAATc                                                                                                                                                                                                                                                         >  2:338936/1‑73 (MQ=255)
                                                                                                                                                                                                                             tACGCAGTTAATAAAACCATTCCATATGAATGGTCGGTATCTTATTGCCTTTAAAACAGTGATTTTAAAAATCGCTTAGGGGATGTTATGCTCACGAAAAAGAAATGGGCGTTAt                                                                                                                                                                                                               >  2:260772/1‑115 (MQ=255)
                                                                                                                                                                                                                                gCAGTTAATAAAACCATTCCATATGAATGGTCGGTATCTTATTGCCTTTAAAACAGTGATTTTAAAAATCGCTGAGGGGATGTTATGCTCACGAAAAAGAAATGGGCGTTATTTAGTCTATTAACACTGTGTGGCGGTACAATTTATAAATTACCGTCGCTGAAAGATGCGTTTTATATCCCGATGCAGGAATATTTCCATTTGACCAATGGTCAAATTgg                                                                                                  <  1:655621/221‑1 (MQ=255)
                                                                                                                                                                                                                                 cAGTTAATAAAACCATTCCATATGAATGGTCGGTATCTTATTGCCTTTAAAACAGTGATTTTAAAAATCGCtt                                                                                                                                                                                                                                                     <  1:338942/73‑1 (MQ=255)
                                                                                                                                                                                                                                   tgcctacggcaatcacaataagggaatagaaccagatgcctgCTTTAAAACAGTGATTTTAAACATCGCTTAGGGGATGTTATGCTCACGACAAAGAAATGGGCGTTATTTAGTCTATTAACACTGTGTGGCGGTACAATTTATACATTACCGTCGCTGACAGCTGCGTTTTATATc                                                                                                                                           <  2:510557‑M1/135‑1 (MQ=255)
                                                                                                                                                                                                                                   tgcctacggcaatcacaataagggaatagaaccagatgcctgCTTTAAAACAGTGATTTTAAAAATCGCTTAGGGGATGTTATGCTCACGAAAAAGAAATGGGCGTTAt                                                                                                                                                                                                               <  2:27179‑M1/67‑1 (MQ=255)
                                                                                                                                                                                                                                   tgcctacggcaatcacaataagggaatagaaccagatgcctgCTTTAAAACAGTGATTTTAAAAATCGCTTAGGGGATGTTATGCTCACGAAAAAGAAATGGGCGTTAt                                                                                                                                                                                                               <  2:520067‑M1/67‑1 (MQ=255)
                                                                                                                                                                                                                                   tgcctacggcaatcacaataagggaatagaaccagatgcctgCTTTAAAACAGTGATTTTAAAAATCGCTTAGGGGATGTTATGCTCACGAAAAAGAAATGGGCGTTAt                                                                                                                                                                                                               <  1:93205‑M1/67‑1 (MQ=255)
                                                                                                                                                                                                                                   tgcctacggcaatcacaataagggaatagaaccagatgcctgCTTTAAAACAGTGATTTTAAAAATCGCTTAGGGGATGTTATGCTCACGAAAAAGAAATGGGCGTTAt                                                                                                                                                                                                               <  1:376869‑M1/67‑1 (MQ=255)
                                                                                                                                                                                                                                   tgcctacggcaatcacaataagggaatagaaccagatgcctgCTTTAAAACAGTGATTTTAAAAATCGCTTAGGGGATGTTATGCTCACGAAAAAGAAATGGGCGTTATTTAGTCTATTAACACTGTTTGGCGGTACAATTTATAAATTACCGTCGCTGAAAGATGCGTTTTATATCCCGTTGCAGGAATATTTCCATTTGACCAATGGTCAAATTGGTAATGCTATGTCGGTAAACTCATTTGTCACCACAGTGGGCTTTTTTCTGTctatttt                                         <  2:600778‑M1/233‑2 (MQ=255)
                                                                                                                                                                                                                                   tgcctacggcaatcacaataagggaatagaaccagatgcctgCTTTAAAACAGTGATTTTAAAAATCGCTTAGGGGATGTTATGCTCACGAAAAAGAAATGGGCGTTATTTAGTCTATTAACACTGTGTGGCGGTACAATTTATAAATTACCGTCGCTGAAAGATGCGTTTTATATc                                                                                                                                           <  1:137339‑M1/135‑1 (MQ=255)
                                                                                                                                                                                                                                   tgcctacggcaatcacaataagggaatagaaccagatgcctgCTTTAAAACAGTGATTTTAAAAATCGCTTAGGGGATGTTATGCTCACGAAAAAGAAATGGGCGTTATTTAGTCTATTAACACTGTGTGGCGGTACAATTTATAAATTACCGTCGCTGAAAGATGCGTTTTATATc                                                                                                                                           <  2:31618‑M1/135‑1 (MQ=255)
                                                                                                                                                                                                                                   tgcctacggcaatcacaataagggaatagaaccagatgcctgCTTTAAAACAGTGATTTTAAAAATCGCTTAGGGGATGTTATGCTCACGAAAAAGAAATGGGCGTTATTTAGTCTATTAACACTGTGTGGCGGTACAATTTATAAATTACCGTCGCTGAAAGATGCGTTTTATATc                                                                                                                                           <  2:635818‑M1/135‑1 (MQ=255)
                                                                                                                                                                                                                                   tgcctacggcaatcacaataagggaatagaaccagatgcctgCTTTAAAACAGTGATTTTAAAAATCGCTTAGGGGATGTTATGCTCACGAAAAAGAAATGGGCGTTATTTAGTCTATTAACACTGTGTGGCGGTACAATTTATAAATTACCGTCGCTGAAAGATGCGTTTTATATCCCGATGCAGGAATATTTCCATTTGACCAATGGTCAAATTGGTAATGCTATTTCGGTAAACTCATTTGTCACCACAGTAGTCTTTTTTCTTTttntttn                                         <  2:613‑M1/233‑2 (MQ=255)
                                                                                                                                                                                                                                    ttAATAAAACCATTCCATATGAATGGTCGGTATCTTATTGCCTTTAAAACAGTGATTTTAAAAATCGCTTAGGGGATGTTa                                                                                                                                                                                                                                          >  2:164026/1‑81 (MQ=255)
                                                                                                                                                                                                                                    ttAATAAAACCATTCCATATGAATGGTCGGTATCTTATTGCCTTTAAAACAGTGATTTTAAAAATCGCTTAGGGGATGTTATGCTCACGAAAAAGAAATGGGCGtt                                                                                                                                                                                                                 >  1:180411/1‑106 (MQ=255)
                                                                                                                                                                                                                                     cctacggcaatcacaataagggaatagaaccagatgcctgCTTTAAAACAGTGATTTTAAAAATCGCTTAGGGGATGTTATGCTCACGAAAAAGAAATGGGCGTTAt                                                                                                                                                                                                               <  2:39255‑M1/67‑1 (MQ=255)
                                                                                                                                                                                                                                       tacggcaatcacaataagggaatagaaccagatgcctgCTTTAAAACAGTGATTTTAAAAATCGCTTAGGGGATGTTATGCTCACGAAAAAGAAATGGGCGTTATTTAg                                                                                                                                                                                                           >  2:392078‑M1/39‑109 (MQ=255)
                                                                                                                                                                                                                                       tacggcaatcacaataagggaatagaaccagatgcctgCTTTAAAACAGTGATTTTAAAAATCGCTTAGGGGATGTTATGCTCACGAAAAAGAAATGGGCGTTATTTAg                                                                                                                                                                                                           >  1:520074‑M1/39‑109 (MQ=255)
                                                                                                                                                                                                                                       tacggcaatcacaataagggaatagaaccagatgcctgCTTTAAAACAGTGATTTTAAAAATCGCTTAGGGGATGTTATGCTCACGAAAAAGAAATGGGCGTTATTTAg                                                                                                                                                                                                           >  1:27179‑M1/39‑109 (MQ=255)
                                                                                                                                                                                                                                       tacggcaatcacaataagggaatagaaccagatgcctgCTTTAAAACAGTGATTTTAAAAATCGCTTAGGGGATGTTATGCTCACGAAAAAGAAATGGGCGTTATTTAg                                                                                                                                                                                                           >  1:22391‑M1/39‑109 (MQ=255)
                                                                                                                                                                                                                                       tacggcaatcacaataagggaatagaaccagatgcctgCTTTAAAACAGTGATTTTAAAAATCGCTTAGGGGATGTTATGCTCACGAAAAAGAAATGGGCGTTATTTAg                                                                                                                                                                                                           >  2:93204‑M1/39‑109 (MQ=255)
                                                                                                                                                                                                                                       tacggcaatcacaataagggaatagaaccagatgcctgCTTTAAAACAGTGATTTTAAAAATCGCTTAGGGGATGTTATGCTCACGAAAAAGAAATGGGCGTTATTTAGTCTATTAACACTGTGTGGCGGTACAATTTATAAATTACCGTCGCTGAAAGATGCGTTTTATATCCCGa                                                                                                                                       >  2:137338‑M1/39‑177 (MQ=255)
                                                                                                                                                                                                                                       tacggcaatcacaataagggaatagaaccagatgcctgCTTTAAAACAGTGATTTTAAAAATCGCTTAGGGGATGTTATGCTCACGAAAAAGAAATGGGCGTTATTTAGTCTATTAACACTGTGTGGCGGTACAATTTATAAATTACCGTCGCTGAAAGATGCGTTTTATATCCCGa                                                                                                                                       >  1:31618‑M1/39‑177 (MQ=255)
                                                                                                                                                                                                                                       tacggcaatcacaataagggaatagaaccagatgcctgCTTTAAAACAGTGATTTTAAAAATCGCTTAGGGGATGTTATGCTCACGAAAAAGAAATGGGCGTTATTTAGTCTATTAACACTGTGTGGCGGTACAATTTATAAATTACCGTCGCTGAAAGATGCGTTTTATATCCCGa                                                                                                                                       >  1:635827‑M1/39‑177 (MQ=255)
                                                                                                                                                                                                                                       tacggcaatcacaataagggaatagaaccagatgcctgCTTTAAAACAGTGATTTTAAAAATCGCTTAGGGGATGTTATGCTCACGAAAAAGAAATGGGCGTTATTTAGTCTATGAACACTGTGTGGCGGGACAATTTATAAATTACCCTCGCTGAAAGATGCGTTTTATATCCCGa                                                                                                                                       >  1:510564‑M1/39‑177 (MQ=255)
                                                                                                                                                                                                                                        taaAACCATTCCATATGAATGGTCGGTATCTTATTGCCTTTAAAACAGTGATTTTAAAAATCGCTTAGGGGATGTTATGCt                                                                                                                                                                                                                                      <  1:164029/81‑1 (MQ=255)
                                                                                                                                                                                                                                        taaAACCATTCCATATGAATGGTCGGTATCTTATTGCCTTTAAAACAGTGATTTTAAAAATCGCTTAGGGGATGTTATGCTCACGAAAAAGAAATGGGCGTTAttt                                                                                                                                                                                                             <  2:180408/106‑1 (MQ=255)
                                                                                                                                                                                                                                        taaAACCATTCCATATGAATGGTCGGTATCTTATTGCCTTTAAAACAGTGATTTTAAAAATCGCTTAGGGGATGTTATGCTCACGAAAAAGAAATGGGCGTTATTTAGTCTATTAACACTGTGTGGCGGTACAAt                                                                                                                                                                                <  2:344450/135‑1 (MQ=255)
                                                                                                                                                                                                                                        taaAACCATTCCATATGAATGGTCGGTATCTTATTGCCTTTAAAACAGTGATTTTAAAAATCGCTTAGGGGATGTTATGCTCACGAAAAAGAAATGGGCGTTATTTAGTCTATTAACACTGTGTGGCGGTACAATTTATAAATTACCGTCGCTGAAAGATGCGTTTTATATCCCGATGCAGGAATATTTCCATTTGACCAATGGTCAAATTGGTAATGCTATGTCGGTAAACTCATTTGTCACCACAGTGGACttt                                                       >  1:94241/1‑256 (MQ=255)
                                                                                                                                                                                                                                         cggcaatcacaataagggaatagaaccagatgcctgCTTTAAAACAGTGATTTTAAAAATCGCTTAGGGGATGTTATGCTCACGAAAAAGAAATGGGCGTTATTTAg                                                                                                                                                                                                           >  1:39255‑M1/37‑107 (MQ=255)
                                                                                                                                                                                                                                            aCCATTCCATATGAATGGTCGGTATCTTATTGCCTTTAAAACAGTGATTTTAAAAATCGCTTAGGGGATGTTATGCTCACGAAAAAGAAATGGGCGTTATTTAGTCTATTAACACtgt                                                                                                                                                                                             >  2:389775/1‑118 (MQ=255)
                                                                                                                                                                                                                                              cATTCCATATGAATGGTCGGTATCTTATTGCCTTTAAAACAGTGATTTTAAAAATCGCTTAGGGGATGTTATGCTCACGAAAAAGAAATGGGCGTTAttt                                                                                                                                                                                                             >  2:198835/1‑100 (MQ=255)
                                                                                                                                                                                                                                              cATTCCATATGAATGGTCGGTATCTTATTGCCTTTAAAACAGTGATTTTAAAAATCGCTTAGGGGATGTTATGCTCACGAAAAAGAAATGGGCGTTATTTAGTCTATTAACACTGTGTGGCGGTACAATTTATAAATTACCGTCGCTGAAAGa                                                                                                                                                        >  1:442861/1‑153 (MQ=255)
                                                                                                                                                                                                                                                ttCCATATGAATGGTCGGTATCTTATTGCCTTTAAAACAGTGATTTTAAAAATCGCTTAGGGGATGTTATGCTCACGAAAAAGAAATg                                                                                                                                                                                                                       >  2:494089/1‑88 (MQ=255)
                                                                                                                                                                                                                                                ttCCATATGAATGGTCGGTATCTTATTGCCTTTAAAACAGTGATTTTAAAAATCGCTTAGGGGATGTTATGCTCACGAAAAAGAAATGGGCGTTAt                                                                                                                                                                                                               >  2:604960/1‑96 (MQ=255)
                                                                                                                                                                                                                                                ttCCATATGAATGGTCGGTATCTTATTGCCTTTAAAACAGTGATTTTAAAAATCGCTTAGGGGATGTTATGCTCACGAAAAAGAAATGGGCGTTATTTAGTCTATTAACACTGTGTgg                                                                                                                                                                                         <  1:389781/118‑1 (MQ=255)
                                                                                                                                                                                                                                                  ccATATGAATGGTCGGTATCTTATTGCCTTTAAAACAGTGATTTTAAAAATCGCTTAGGGGATGTTATGCTCACGAAAAAGAAATGGGCGTTAt                                                                                                                                                                                                               >  1:665902/1‑94 (MQ=255)
                                                                                                                                                                                                                                                  ccATATGAATGGTCGGTATCTTATTGCCTTTAAAACAGTGATTTTAAAAATCGCTTAGGGGATGTTATGCTCACGAAAAAGAAATGGGCGTTATTTAGTc                                                                                                                                                                                                         <  1:198838/100‑1 (MQ=255)
                                                                                                                                                                                                                                                  ccATATGAATGGTCGGTATCTTATTGCCTTTAAAACAGTGATTTTAAAAATCGCTTAGGGGATGTTATGCTCACGAAAAAGAAATGGGCGTTATTTAGTCTATTAACACTGTGTGGCGGTACAATTTATAAATTACCGTCGCTGAAAGAt                                                                                                                                                       <  1:433661/150‑1 (MQ=255)
                                                                                                                                                                                                                                                  ccATATGAATGGTCGGTATCTTATTGCCTTTAAAACAGTGATTTTAAAAATCGCTTAGGGGATGTTATGCTCACGAAAAAGAAATGGGCGTTATTTAGTCTATTAACACTGTGTGGCGGTACAATTTATAAATTACCGTCGCTGAAAGATGCg                                                                                                                                                    <  2:442854/153‑1 (MQ=255)
                                                                                                                                                                                                                                                    atatGAATGGTCGGTATCTTATTGCCTTTAAAACAGTGATTTTAAAAATCGCTTAGGGGATGTTATGCTCACGAAAAAGAAATGGGCGTTATTTAg                                                                                                                                                                                                           <  1:604969/96‑1 (MQ=255)
                                                                                                                                                                                                                                                    atatGAATGGTCGGTATCTTATTGCCTTTAAAACAGTGATTTTAAAAATCGCTTAGGGGATGTTATGCTCACGAAAAAGAAATGGGCGTTATTTAGTCTATTAACACTGTGTGGCGGTACAATTTATAAATTACCGTCGCTGAAAGATGCGTTTTATATCCCGATGCAGGAATATTTCCATTTGAc                                                                                                                 <  1:649342/186‑1 (MQ=255)
                                                                                                                                                                                                                                                    atatGAATGGTCGGTATCTTATCGCCTTTAAAACAGTGAGTTTAAAAATCGCTTAGGGCATGTCATGCTCACCAAAAAGAAATGGGCg                                                                                                                                                                                                                   <  1:494096/88‑1 (MQ=255)
                                                                                                                                                                                                                                                      atGAATGGTCGGTATCTTATTGCCTTTAAAACAGTGATTTTAAAAATCGCTTAGGGGATGTTATGCTCACGAAAAAGAAATGGGCGTTATTTAg                                                                                                                                                                                                           <  2:665893/94‑1 (MQ=255)
                                                                                                                                                                                                                                                        gAATGGTCGGTATCTTATTGCCTTTAAAACAGTGATTTTAAAAATCGCTTAGGGGATGTTATGCTCACGAAAAAGAAATGGGCGTTATTTAGTCTATTAACACTGTGTGGCGGTACAATTTATAAATTACCGTCGCTGAAAGATGCGTTTTATATCCCGATGCAGGAATAttt                                                                                                                          >  2:140627/1‑173 (MQ=255)
                                                                                                                                                                                                                                                            ggTCGGTATCTTATTGCCTTTAAAACAGTGATTTTAAAAATCGCTTAGGGGATGTTATGCTCACGAAAAAGAAATGGGCGTTATTTAGTCTATTAACACTGTGTGGCGGTACAATTTATAAATTACCGTCGCTGAAAGATGCGTTTTATATCCCGATGCAGGAATATTTCCAt                                                                                                                      <  1:140628/173‑1 (MQ=255)
                                                                                                                                                                                                                                                                ggTATCTTATTGCCTTTAAAACAGTGATTTTAAAAATCGCTTAGGGGATGTTATGCTCACGAAAAAGAAATGGGCGtt                                                                                                                                                                                                                 >  1:140813/1‑78 (MQ=255)
                                                                                                                                                                                                                                                                  tATCTTATTGCCTTTAAAACAGTGATTTTAAAAATCGCt                                                                                                                                                                                                                                                      >  2:446114/1‑39 (MQ=255)
                                                                                                                                                                                                                                                                    tCTTATTGCCTTTAAAACAGTGATTTTAAAAATCGCTTAGGGGATGTTATGCTCACGAAAAAGAAATGGGCGTTAttt                                                                                                                                                                                                             <  2:140812/78‑1 (MQ=255)
                                                                                                                                                                                                                                                                    tCTTATTGCCTTTAAAACAGTGATTTTAAAAATCGCTTAGGGGATGTTATGCTCACGAAAAAGAAATGGGCGTTATTTAGTCTATTAACACTGTGTGGCGGTACAATTTATAAATTACCGTCGCTGAAAGATGCGTTTTATATCCCGATGCAGGAATATTTCCATTTGACCAATGGTCAAATTGGTAATGCTATGTCGGTAAACTCATTTGTCACCACAGTGGGCTTTTTTCt                                                  <  1:364980/233‑1 (MQ=255)
                                                                                                                                                                                                                                                                      ttATTGCCTTTAAAACAGTGATTTTAAAAATCGCTTAgg                                                                                                                                                                                                                                                  <  1:446121/39‑1 (MQ=255)
                                                                                                                                                                                                                                                                       tATTGCCTTTAAAACAGTGATTTTAAAAATCGCTTAGGGGATGTTATGCTCACGAAAAAGAAATGGGCGTTATTTAGTCTATTAACACTGTGTGGCGGTACAATTTATAAATTACCGTCGCTGAAAGATGCGTTTTATATCCCGATGCAGGAGTATTTCCATTTGACCAATGGTCAAATTGGTAATGCTATGt                                                                                       >  1:627665/1‑193 (MQ=255)
                                                                                                                                                                                                                                                                           gCCTTTAAAACAGTGATTTTAAAAATCGCTTAGGGGATGTTATGCTCACGAAAAAGAAATGGGCGTTATTTAGTCTATTAACACTGTGTGGCGGTACAATTTATAAATTACCGTCGCTGAAAGATGCGTTTTATATCCCGATGCAGGAATATTTCCATTTGACCAATGGTCAAATTGGTAATGCTATGTCGGt                                                                                   <  2:627656/193‑1 (MQ=255)
                                                                                                                                                                                                                                                                            ccTTTAAAACAGTGATTTTAAAAATCGCTTAGGGGATGTTATGCTCACGAAAAAGAAATGGGCGtt                                                                                                                                                                                                                 >  2:290519/1‑66 (MQ=255)
                                                                                                                                                                                                                                                                            ccTTTAAAACAGTGATTTTAAAAATCGCTTAGGGGATGTTATGCTCACGAAAAAGAAATGGGCGTTAt                                                                                                                                                                                                               >  2:390955/1‑68 (MQ=255)
                                                                                                                                                                                                                                                                            ccTTTAAAACAGTGATTTTAAAAATCGCTTAGGGGATGTTATGCTCACGAAAAAGAAATGGGCGTTATTTAGTCTATTAACACTGTGTGGCGGTACAATTTATAAATTACCGTCGCTGAAAGATGCGTTTTATATCCCGATGCAGGAATATTTCCATTTGACAAATGGTCAAATTGGTAATGCTATGTCGGTAAACTCATTTGTCACCACAGTGGGCTTTTTTCTGTCTATTTATTTTGCCGATAAACTACCGCGCAGATCACCCATTTCAtt  >  2:659733/1‑273 (MQ=255)
                                                                                                                                                                                                                                                                            ccTTTAAAACAGTGAATTTAAAAAACGCACAGGGGATGTTATGCTCACGAAAAAGAAATGGGCGTTAt                                                                                                                                                                                                               >  1:511078/1‑68 (MQ=255)
                                                                                                                                                                                                                                                                             |                                                                                                                                                                                                                                                                               
TACTATGCGCCGGCGTTCCGCTTTGAAGACGAAGATGATAATCCGTGGATCCCTTATCGCCAGATGAGTGAAACACCATTGCCAGAAAATCATTTACTGGATGCGCGGTTACGTAAAGAAAAAGAAGATGCAATTAATCAGATAAATCATGTGCGTAACGTACTACAACAAATCAAACAAGAGGCAAACCATCTTCTGAACCACTAATAAGTTTTAACTCATACGCAGTTAATAAAACCATTCCATATGAATGGTCGGTATCTTATTGCCTTTAAAACAGTGATTTTAAAAATCGCTTAGGGGATGTTATGCTCACGAAAAAGAAATGGGCGTTATTTAGTCTATTAACACTGTGTGGCGGTACAATTTATAAATTACCGTCGCTGAAAGATGCGTTTTATATCCCGATGCAGGAATATTTCCATTTGACCAATGGTCAAATTGGTAATGCTATGTCGGTAAACTCATTTGTCACCACAGTGGGCTTTTTTCTGTCTATTTATTTTGCCGATAAACTACCGCGCAGATACACCATGTCATT  >  CP009273/4055299‑4055839

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.