New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP009273	= 71882	43 (1.120)	11 (0.300)	7/296	NT	19.0%	coding (86/984 nt)	thiB	thiamine‑, thiamine pyrophosphate‑, thiamine monophosphate‑binding ABC transporter periplasmic protein; ThiBPQ thiamine, thiamine pyrophosphate importer
	?	CP009273	= 72017	53 (1.460)					intergenic (‑50/+114)	thiB/sgrR	thiamine‑, thiamine pyrophosphate‑, thiamine monophosphate‑binding ABC transporter periplasmic protein; ThiBPQ thiamine, thiamine pyrophosphate importer/transcriptional DNA‑binding transcriptional activator of sgrS sRNA

GGTACGAAAGTGTCATTATTCCAGCCGCCGGGAACGTTAACGGCATCCGCTGCCACACCGCTTTTGGCAAACAGTCCGGTTTTACTGGCGGCGTCTAACAGGTTGTTATCCAGCCCCAGCACCACATCGGCTTTACTGTTTTTGCCTTCCATCCGTAGACGGTTGAGAAGCGAAACGCCATCTTCCAGCGCCACCAGTTTCAGTTCGCAATTACAGTCGGCTTCAAAGGCTTTTTTAACCACCGGACCAGGCCCCCAGTCGGCGGCGAAGGAATCGTAGGTATAAACAGTCAGAACGGGTTTAGCGAAAACGGGCGCTGTGCACAGCAACAGCAGGGGCAGACATTTTTTTAACACTTTGCACCTCAAAAAAGAGTGGCAAAGGACTTGAGAAGGAGCCTCAAATCCCTTCGCCGGCGTTATCCGGATCAGGTTCGACGGGTATTTTCTCAGCGCACGCGTACGCGTGGCACCCCGTTGAGAACGGCGTTAGTGTAGTGATTTTGTTATCAACCAGCAATCATGGATCCGGTGGCGCAAACCAC  >  CP009273/71612‑72155                                                                                                                                                                                                                                                                               |                                                                                                                                                                                                                                                                                  gtgactctagagtCATTATTCCACCCGCCGGGAACGTTAACGGCATCCGCTTCCACACCTCTTTTGGCAAACAGTCCGGTTTTACTGGCGGCGGCTAACAGGTTGTTATCCAGCCCCAGCACCACATCGGCTTTACTGTTTTTGCCTTCCATCCGTAGACGGTTGAGAAGCGAAACGCCATCTTCCAGCGCCACCAGTTTCAGTTCGCAATTACAGTCGGCTTCAAAGGCTTTTTTAACCACCGGACCAGGCCCCCAGTCGGCGGCGAAGGaa                                                                                                                                                                                                                                                                                 <  2:122341/262‑1 (MQ=255)   tACGAAAGTGTCATTATTCCAGCCGCCGGGAACGTTAACGGCATCCGCTGCCACACCGCTTTTGGCAAACAGTCCGGTTTTACTGGCGGCGTCTAACAGGTTGTTATCCAGCCCCAGCACCACATCGGCTTTACTGTTTTTGCCTTCCATCCGTAGACGGTTGAGAAGCGAAACGCCATCTTCCAGCGCCACCAGTTTCCGTTCGCAATTACAGTCGGCTTCAACGGCTTTTTTAACAACCGGACCAGGCCCCCAGTCGGCGGCGAAGGAATc                                                                                                                                                                                                                                                                               >  1:122342/1‑273 (MQ=255)    aCGAAAGTGTCATTATTCCAGCCGCCGGGAACGTTAACGGCATCCGCTGCCACACCGCTTTTGGCAAACAGTCCGGTTTTACTGGCGGCGTCTACCAGGTTGTTATCCAGCCCCAGCACCACATCGGCTTTACTGTTTTTGCCTTCCATCCGTAGACGGTTGAGAAGCGAAACGCCATCTTCCAGCGCCACCAGTTTCAGTTCGCAATTACAGTCGGCTTCAAAGGCTTTTTTAACCACCGGACTAGGCCCCCAGTCGGCGGCGAAGGAATCg                                                                                                                                                                                                                                                                              <  1:256802/273‑1 (MQ=255)             tCATTATTCCAGCCGCCGGGAACGTTAAAGGCATCCGCTGCCACACCGCTTTTGGCAAACAGTCCGGTTTTACTGGCGGCGTCTAACAGGTTGTTATCCAGCCCCAGCACCACATCGGCTTTACTGTTTTTGCCTTCCATCCGTAGACGGTTGAGAAGCGAAACGCCATCTTCAAGCGCCACCNGTTTCAGTTCGCAATTACAGTCGGCTTCAAAGGATTTTTTAACCACCGGACCAGGCCCCCAGTCGGCGGCGAAGGAATCGTAAGTATaaa                                                                                                                                                                                                                                                                    >  1:531510/1‑274 (MQ=255)                                       gtgccattattgcaccactggctgatcatacaggggcaacgcagtatgcgcggcctgcgcatgaataccctcggctggttcgattttaaatcagcgtggtttgcgccaccggatccatgattgctggttgataacaaaatcactacactaacgccgttctcaacggggtgccacgcgtacgcgngcgctgagaaaatacccgtcgaacctgatccggataacgcCGGCGAAGGAATCGTAGGTATAAACAGTCAGAACGGGTTTAGCGAAAACgg                                                                                                                                                                                                                                         <  1:494353‑M1/51‑1 (MQ=255)                                              gtcGCTGCCACACCGCTTTTGGCAAACAGTCCGGTTTTACGGGCGGCGTCTAACAGGTTGTTATCCAGACCCAGCACAACATAGACTTTACTGTTTTTGCATTCCATCCGTAGACGGATGAGAAGCGAAACGCCATCTTCGAGCGCCACCAGTTTCAGTTCGCAATAACAGTCGGATGCAAAGGCTTTTTTAACCACCGGACCAGGAGCAAAGTCGGCGGCTACGGAATCGTAGGCATAAAAAGCCAGACAGGGGTTCGCNGAAAcagaggctgg                                                                                                                                                                                                                                  >  2:537192/3‑266 (MQ=255)                                               ccGCTGCCACACCGCTTTTGGCAAACAGTCCGGTTTTACTGGCGGCGTCTAACAGGTTGTTATCCAGCCCCAGCACCACATCGGCTTTACTATTTTTTCCTTCCATCCGTAGACGGTTGAGAAGCGAAACGCCATCTTCCAGCGCCACCAGTTTCAGTTCGCAATTACAGTCGGCTTCAAAGGCTTTTTTAACCACCGGACCAGGCCCCCAGTCGGCGGCGAAGGAATCGTAGGTATAAACAGt                                                                                                                                                                                                                                                                <  1:641294/244‑1 (MQ=255)                                                                                     cTGGCGGCGTCTAACAGGTTGTTATCCAGCCACAGCACCACATCGGCTTTACTGTTTTTGCCTTCCATCCGTAGACGGTTGAGAAGCGAAACGCCATCTTCCAGCGCCACCAGTTTCAGTTCGCAATTACAGTCGGCTTCAAAGGCTTATTTAACCAACGGACAAGGCCACCAGGCGGCGGCGAAGGAATCGTAGGAATAAACAGTCAGAACGGGTTTAGCGAAAACGGGCGCTGGGCACAGCAAAAGCAGGGGAAGACAttgtgtgaaaaattt                                                                                                                                                                                           >  1:91012/1‑262 (MQ=255)                                                                                        gctgcgTTTCACAGTTTGTTATCCATCCCCAGCACCACATCGGCTTTACTGTTTTTGTCTTCCATCCGTAGACGGTTGAGAAGCGAAACGCCATCTTCCAGCGCCACCAGTTTCAGTTCGCAATTACAGTCGGCTTCAAAGGCTTTTTTAACCACCGGACCAGGCCCCCAGTCGGCGGCGAAGGAATCGTAGGTATAAACAGTCAGAACGGGTTTAGCGAAAACGGGCGCTGTGCACAGCAACAGCAGGGGCAGACATTTTTTTAACACTTTGCa                                                                                                                                                                                        <  1:234896/272‑1 (MQ=255)                                                                                         cggcgTCTAACAGGTTGTTATCCAGCCCCAGCACCACATCGGCTTTACTGTTTTTGCCTTCCATCCGTAGACGGTTGAGAAGCGAAACGCCATCTTCCAGCGCCACCAGTTTCAGTTCGCAATTACAGTCGGCTTCAAAGGCTTTTTTAACCACCGGACCAGGCCCCCAGTCGGCGGCGAAGGAAACGTAGGTATAAACAGTCCGAACGGGTTTAGCGAAAACGCGCGCTGTGCACAGCAAACGCAGGGGCAGACAATTTTTTAACACTTTGCAc                                                                                                                                                                                       >  2:281805/1‑275 (MQ=255)                                                                                                    gggtgattATCCCTCCCCAGAACCAAATCGGGTTTACTGTTTTTGCCTTCCATCCGTAGACGGTTGAGAAGCGAAACGCCATCTTCCAGCGCCAACAGTTTCAGTTCGCAATTACAGTCGGCTTCAAAGGCTTTTTTAACCACCGGACCAGGCCCCCAGTCGGCGGCGAAGGAATCGTAGGTATAAACAGTCAGAACGGGTTTAGCGAAAACGGGCGCTGTGCACAGCAACAGCAGGGGCAGACATTTTTTTAACACTTTGCACCTCAAAAAaga                                                                                                                                                                            <  1:281810/269‑1 (MQ=255)                                                                                                        tgttATCCAGCCCCAGCACCACATCGGCTTTACTGTTTTTGCCTTCCATCCGTAGACGGTTGAGAAGCGAAACTCCATCTTCCAGCGCCACCAGTTTCAGTTCGCAATTACAGTCGGCTTCAAAGGCTTTTTTAACCACCGGACCAGGCCCCCAGTCGGCGGCGAAGGAATCGTAGGTCTAAACAGTCAGAACGGGTTTAGCGAAACCGGGCGCTGTGCAAAGCAACAGCAGGGGCAGACATTTTTTTAACACTTTGCACCTCAAAAAAGAGTga                                                                                                                                                                        >  1:52643/1‑274 (MQ=255)                                                                                                        tgttATCCAGCCCCAGCACCACATCGGCTTTACTGTTTTTGCCTTCCATCCGTAGACGGTTGAGAAGCGAAACGCCATCTTCCAGCGCCACCAGTTTCAGTTCGCAATTACAGTCGGCTTCAAAGGCTTTTTTAACCACCGGACCAGGCCCCCAGTCGGCGGCGAAGGa                                                                                                                                                                                                                                                                                  >  2:646141/1‑169 (MQ=255)                                                                                                        tgttATCCAGCCCCAGCACCACATCGGCTTTACTGTTTTTGCCTTCCATCCGTAGACGGTTGAGAAGCGAAACGCCATCTTCCAGCGCCACCAGTTTCAGTTCGCAATTACAGTCGGCTTCAAAGGCTTTTTTAACCACCGGACCAGGCCCCCAGTCGGCGGCGAAGGAATCGTAGGTATAAACAGTCAGAACGGGTTTAGCGAAAACGGGCGCTGTGCACAGCAACAGCAGGGGCAGACATTTTTTTAACACTTTGCACCTCAAAAAAGAGTgg                                                                                                                                                                        >  1:258128/1‑275 (MQ=255)                                                                                                            aTCCAGCCCCAGCACCACATCGTCTTTACTGTTTTTGCCTTCCATCCGTAGACGGTTGAGAAGCGAAACGCCATCTTCCAGCGCCACCAGTTTCAGTTCGCAATTACAGTCGGCTTCAAAGGCTTTTTTAACCACCGGACCAGGCCCCCAGTCGGCGGCGAAGGAATCg                                                                                                                                                                                                                                                                              <  1:646150/169‑1 (MQ=255)                                                                                                                aGCCCCAGCACCACATCGGCTTTACTGTTTTTGCCTTCCATCCGTAGACGGTTGAGAAGCGAAACGCCATCTTCCAGCGCCACCAGTTTCAGTTCGCAATTACAGTCGGCTTCAAAGGCTTTTTTAACCACCGGACCAGGCCCCCATTCGGCGGCGAAGGAATCGTAGGTATAAACAGTCCGAACGGGTTTAGCGAACAAGGgcgc                                                                                                                                                                                                                                     >  1:365087/1‑206 (MQ=255)                                                                                                                  ccccAGCACCACATCGGCTTTACTGTTTTTGCCTTCCATCCGTAGACGGTTGAGAAGCGAAACGCCATCTTCCAGCGCCACCAGTTTCAGTTCGCAATTACAGTCGGCTTCAAAGGCTTTTTTAACCACCGGACCAGGCCCCCAGTCGGCGGCGAAGGAATCGTAGGTATAAACAGTCAGAACGGGTTTAGCGAAAACGGGCGCTGTGCACAGCAACAGCAGGGGCAGACATTTTTTTAACACTTTg                                                                                                                                                                                          <  2:316821/247‑1 (MQ=255)                                                                                                                  ccccAGCACCACATCGGCTTTACTGTTTTTGCCTTCCATCCGTAGACGGTTGAGAAGCGAAACGCCATCTTCCAGCGCCACCAGTTTCAGTTCGCAATTACAGTCGGCTTCAAAGGCTTTTTTAACCACCGGACCAGGCCCCCAGTCGGCGGCGAAGGAATCGTAGGTATAAACAGTCAGAACGGGTTTAGCGAAAACGGGCGCTGTGCACAGCAACAGCAGGGGCAGACATTTTTTTAACACTTTg                                                                                                                                                                                          >  1:316827/1‑247 (MQ=255)                                                                                                                         accacATCGGCTTTACTGTTTTTGCCTTCCATCCGTAGACGGTTGAGAAGCGAAACGCCATCTTCCAGCGCCACCAGTTTCAGTTCGCAATTACAGTCGGCTTCAAAGGCTTTTTTAACCACCGGACCAGGCCCCCAGTCGGCGGCGAAGGAATCGTAGGTATAAACAGTCAGAACGGGTTTAGCGAAAACGGGCGCTGTGCACAGCAACAGCAGGGGCAGACATTTTTTTAACACTTTGCACCTCAAAAATGAGTGGCaaaccgacatcctgg                                                                                                                                                        <  1:79915/274‑13 (MQ=255)                                                                                                                          gtgtacatcagcggcgtgtgagccaacggatccatgattgctggttgaaaacaaaatcactacactaacgccgttctcaacggggtgccacgcgtacgcgtgcgctgagaaaatacccgtcgaaactgatccggataacgcCGGCGAAGGAATCGTAGGTATAAACAGTCAGAACGGGTTTAGCGAAAACGGGCGCTGTGCACAGCAACAGCAGGGGCAGACATTTTTTTAACACTTTGCACCTCAAAAAAGAGTGGCAAAGGACTTGAGAAGGa                                                                                                                                                      >  2:494346‑M1/142‑275 (MQ=255)                                                                                                                          ccccatcgGCTTTACTGTTTTTGCCTTCCAGCCGTAGACGGTGGGGAAGCGAAACGCCATCTTCCAGCGCCACCAGTTTCAGTTCGCAATTACAGTCGGCTTCAAAGGCTTTTTTAACCACCGGACCAGGCCCCCAGTCGGCGGCGAAGGgatttgatgctccttctcaagtcctttgccactcttttttgaggtgcaaagtgttaaaaaaatgtctgcccctgctgttgctgtgcacagcgcccgttttcgctaaacccgttctgactgtttat                                                                                                                                                      <  1:342621‑M1/272‑126 (MQ=255)                                                                                                                            acaTCGGCTTTACTGTTTTTGCCTTCCATCCGTAGACGGTTGAGAAGCGAAACGCCATCTTCCAGCGCCACCAGTTTCAGTTCGCAATTACAGTCGGCTTCAAAGGCTTTTTTAACCACCGGACCAGGCCCCCAGTCGGCGGCGAAGGAATCGTAGGTATAAACAGTCAGAACGGGTTTAGCGAAAACGGGCGCTGTGCACAGCAACAGCAGGGGCAGACATTTTTTTAACACTTTGCACCTCAAAAAAGAGt                                                                                                                                                                          >  2:321329/1‑253 (MQ=255)                                                                                                                              aaatcagcgtggtttgcgccaccggatccatgattgctggttgataacaaaatcactacactaacgccgttctcaacggggtgccacgcgtacgcgtgcgctgagaaaatacccgtcgaacctgatccggataacgcCGGCGAAGGAATCGTAGGTATAAACAGTCAGAACGGGTTTAGCGAAAACGGGCGCTGTGCACAGCAACAGCAGGGGCAg                                                                                                                                                                                                             <  2:557505‑M1/79‑1 (MQ=255)                                                                                                                                cGGCTTTACTGTTTTTGCCTTCCATCCGTAGACGGTTGAGAAGCGAAACGCCATCTTCCAGCGCCACCAGTTTCAGTTCGCAATTACAGTCGGCTTCAAAGGCTTTTTTAACCACCGGACCAGGCCCCCAGTCGGCGGCGAAGGAATCGTAGGTATAAACAGTCAGAACGGGTTTAGCGAAAACGGGCGCTGTGCACAGCAACAGCAGGGGCAGACATTTTTTTAACACTTTGCACCTCAAAAAAGAGTGGCa                                                                                                                                                                      <  1:321335/253‑1 (MQ=255)                                                                                                                                cGGCTTTACTGTTTTTGCCTTCCATCCGTAGACGGTTGAGAAGCGAAACGCCATCTTCCAGCGCCACCAGTTTCAGTTCGCAATTACAGTCGGCTTCAAAGGCTTTTTTAACCACCGGACCAGGCCCCCAGTCGGCGGCGAAGGAATCGTAGGTATAAACAGTCAGAACGGGTTTAGCGAAAACGGGCGCTGTGCACAGCAACAGCAGGGGCAGACATTTTTTTAACACTTTGCACCTCAAAAAAGAGTGGCAAAGGACTTGAGAAGGAGCCtaa                                                                                                                                                >  1:424390/1‑273 (MQ=255)                                                                                                                                  cagcgtggtttgcgccaccggatccatgattgctggttgataacaaaatcactacactaacgccgttctcaacggggtgccacgcgtacgcgtgcgctgagaaaatacccgtcgaacctgatccggataacgcCGGCGAAGGAATCGTAGGTATAAACAGTCAGAACGGGTTTAGCGAAAACGGGCGCTGTGCACAGCAACAGCAGGGGCAGACAt                                                                                                                                                                                                         >  1:557514‑M1/134‑216 (MQ=255)                                                                                                                                     ttACTGTTTTTGCCTTCCATCCGTAGACGGTTGAGAAGCGAAACGCCATCTTCCAGCGCCACCAGTTTCAGTTCGCAATTACAGTCGGCTTCAAAGGCTTTTTTAACCACCGGACCAGGCCCCCAGTCGGCGGCGAAGGAATCGTAGGTATAAACAGTCAGAACGGGTTTAGCGAAAACGGGCGCTGTGCACAGCAACAGCAGGGGCAGACATTTTTTTAACACTTTGAACCTCAAAAAAGAGTGGCAAAGGACTTGAAAAGGAGCCTCaaaac                                                                                                                                            >  1:447332/1‑272 (MQ=255)                                                                                                                                      ttttgttTTTGCTGTCCCTCCGTATACGGTTGTGACGCCAAACGCCATCTTCCAGCCCCACCCGGTTCAGTTTGCAATTACAGTCGACTTCAAAGGCTTTTTTAACCACCGGACCAGGCCCCCAGTCGGCGGCGAAGGAATCGTAGGTATAAACAGTCAGAACGGGTTTAGCGAAAACGGGCGCTGTGCACAGCAACAGCAGGGTCAGATAGTTTTTAGACACTTTTGTCCTCAAAAAAGAGTGGCAAAGGACTTGAGAAGGGGCATCAAATCcc                                                                                                                                          >  2:602619‑M2/4‑273 (MQ=255)                                                                                                                                            ttttGCCTTCCATCCGTAGACGGTTGAGAAGCGAAACGCCATCTTCCAGCGCCACCAGTTTCAGTTCGCAATTACAGTCGGCTTCAAAGGCTTTTTTAACCACCGGACCAGGCCCCCAGTCGGCGGCGATGGgatttgagg                                                                                                                                                                                                                                                                          >  1:38840‑M1/1‑132 (MQ=255)                                                                                                                                            ttttGCCTTCCATCCGTAGACGGTTGAGAAGCGAAACGCCATCTTCCAGCGCCACCAGTTTCAGTTCGCAATTACAGTCGGCTTCAAAGGCTTTTTTAACCACCGGACCAGGCCCCCAGTCGGCGGCGAAGGgatttgaggctccttctcaagtcctttgccactcttttttgaggtgcaaagtgttaaaaaaatatctgcccctgctgttgctgtgcacagcgcccgttttcgcta                                                                                                                                                                          >  1:698040‑M1/1‑132 (MQ=255)                                                                                                                                                gCCTTCCATCCGTAGACGGTTGAGAAGCGAAACGCCATCTTCCAGCGCCACCAGTTTCAGTTCGCAATTACAGTCGGCTTCAAAGGCTTTTTTAACCACCGGACCAGGCCCCCAGTCGGCGGCGATGGgatttgaggctcc                                                                                                                                                                                                                                                                      <  2:38840‑M1/141‑14 (MQ=255)                                                                                                                                                gCCTTCCATCCGTAGACGGTTGAGAAGCGAAACGCCATCTTCCAGCGCCACCAGTTTCAGTTCGCAATTACAGTCGGCTTCAAAGGCTTTTTTAACCACCGGACCAGGCCCCCAGTCGGCGGCGAAGGa                                                                                                                                                                                                                                                                                  >  2:185483/1‑129 (MQ=255)                                                                                                                                                 ccTTCCATCCGTAGACGGTTGAGAAGCGAAACGCCATCTTCCAGCGCCACCAGTTTCAGTTCGCAATTACAGTCGGCTTCAAAGGCTTTTTTAACCACCGGACCAGGCCCCCAGTCGGCGGCGAAGGgatttgaggctcc                                                                                                                                                                                                                                                                      <  1:41679‑M1/140‑14 (MQ=255)                                                                                                                                                   ccggatccatgattgctggttgataacaaaatcactacactaacgccgttctcaacggggtgccacgcgtacgcgtgcgctgagaaaatacccgtcgaacctgatccggataacgcCGGCGAAGGAATCGTAGGTATAAACAGTCAGAACGGGTTTAGCGAAAACGGGCGCTGTGCACAGCAACAGCAGGGGCAGACATTTTTTTAACACTTTGCACCTCaaaaaa                                                                                                                                                                              <  1:266925‑M1/110‑1 (MQ=255)                                                                                                                                                    tCCATCCGTAGACGGTTGAGAAGCGAAACGCCATCTTCCAGCGCCACCAGTTTCAGTTCGCAATTACAGTCGGCTTCAAAGGCTTTTTTAACCACCGGACCAGGCCCCCAGTCGGCGGCGAAGGAATCg                                                                                                                                                                                                                                                                              <  1:185486/129‑1 (MQ=255)                                                                                                                                                       atccatgattgctggttgataacaaaatcactacactaacgccgttctcaacggggtgccacgcgtacgcgtgcgctgagaaaatacccgtcgaacctgatccggataacgcCGGCGAAGGAATCGTAGGTATAAACAGTCAGAACGGGTTTAGCGAAAACGGGCGCTGTGCACAGCAACAGCAGGGGCAGACATTTTTTTAACACTTTGCACCTCAAAAAAGAGt                                                                                                                                                                          >  2:266920‑M1/113‑226 (MQ=255)                                                                                                                                                                   ttGAGAAGCGAAACGCCATCTTCCAGCGCCACCAGTTTCAGTTCGCAATTACAGTCGGCTTCAAAGGCTTTTTTAACCACCGGACCAGGCCCCCAGTCGGCGGCGAAGGAATCGTAGGTATAAACAGTCAGAACGGGTTTAGCGAAAACGGGCGCtg                                                                                                                                                                                                                                   >  1:215697/1‑157 (MQ=255)                                                                                                                                                                   ttGAGAAGCGAAACGCCATCTTCCAGCGCCACCAGTTTCAGTTCGCAATTACAGTCGGCTTCAAAGGCTTTTTTAACCACCGGACCAGGCCCCCAGTCGGCGGCGAAGGAATCGTAGGTATAAACAGTCAGAACGGGTTTAGCGAAAACGGGCGCTGTGCACAGCAACAGCAGGGGCAGACAtttt                                                                                                                                                                                                      >  2:314335/1‑186 (MQ=255)                                                                                                                                                                       gaAGCGAAACGCCATCTTCCAGCGCCACCAGTTTCAGTTCGCAATTACAGTCGGCTTCAAAGGCTTTTTTAACCACCGGACCAGGCCCCCAGTCGGCGGCGAAGGAATCGTAGGTATAAACAGTCAGAACGGGTTTAGCGAAAACGGGCGCTGTGca                                                                                                                                                                                                                               <  2:215693/157‑1 (MQ=255)                                                                                                                                                                       gaAGCGAAACGCCATCTTCCAGCGCCACCAGTTTCAGTTCGCAATTACAGTCGGCTTCAAAGGCTTTTTTAACCACCGGACCAGGCCCCCAGTCGGCGGCGAAGGAATCGTAGGTATAAACAGTCAGAACGGGTTTAGCGAAAACGGGCGCTGTGCACAGCAACAGCAGGGGCAGACATTTTTTTa                                                                                                                                                                                                  <  1:314341/186‑1 (MQ=255)                                                                                                                                                                             aaaCGCCATCTTCCAGCGCCACCAGTTTCAGTTCGCAATTACAGTCGGCTTCAAAGGCTTTTTTAACCACCGGACCAGGCCCCCAGTCGGCGGCGAAGGa                                                                                                                                                                                                                                                                                  >  2:44478/1‑100 (MQ=255)                                                                                                                                                                                 gCCATCTTCCAGCGCCACCAGTTTCAGTTCGCAATTACAGTCGGCTTCAAAGGCTTTTTTAACCACCGGACCAGGCCCCCAGTCGGCGGCGAAGGAATCg                                                                                                                                                                                                                                                                              <  1:44478/100‑1 (MQ=255)                                                                                                                                                                                            gcgcCACCAGTTTCAGTTCGCAATTACAGTCGGCTTCAAAGGCTTTTTTAACCACCGGACCAGGCCCCCAGTCGGCGGCGAAGGAATCGTANGTATAAACAGTCAGAACGAGTTTAGCGAAAACGGGCGCTGTGCACAGCAACAGCAGGGGCAGACATTTTTTTAACACTTTGCACCTCAAAAAAGAGTGGCAAAGGACTTGAGAAGGAGCCTCAAATCCCTTCGCCGGCGTTATCCGGATCAGGTTCGACGGGTATTCTCTCAGCGCacgcgta                                                                                    <  1:537200/275‑1 (MQ=255)                                                                                                                                                                                             cgcCACCAGTTTCAGTTCGCAATTACCGTCGGCTGCAAAGGCTTTTTTAACCACCGGACCAGGCCCCCAGTCGGCGGCGAAGGa                                                                                                                                                                                                                                                                                  >  1:474935/1‑84 (MQ=255)                                                                                                                                                                                               ccaccaGTTTCAGTTCGCAATTACAGTCGGCTTCAAAGGCTTTTTTAACCACCGGACCAGGCCCCCAGTCGGCGGCGAAGGa                                                                                                                                                                                                                                                                                  >  2:625064/1‑82 (MQ=255)                                                                                                                                                                                               ccaccaGTTTCAGTTCGCAATTACAGTCGGCTTCAAAGGCTTTTTTAACCACCGGACCAGGCCCCCAGTCGGCGGCGAAGGAATCGTAGGTATAAACAGTCAGAACGGGTTTAGCGAAAACGGGCGCTGTGCACAGCAACAGCAGGGGAAg                                                                                                                                                                                                             >  2:103599/1‑151 (MQ=255)                                                                                                                                                                                                 accaGTTTCAGTTCGCAATTACAGTCGGCTTCAAAGGCTTTTTTAACCACCGGACCAGGCCCCCAGTCGGCGGCGAAGGAATCg                                                                                                                                                                                                                                                                              <  2:474928/84‑1 (MQ=255)                                                                                                                                                                                                   caGTTTCAGTTCGCAATTACAGTCGGCTTCAAAGGCTTTTTTAACCACCGGACCAGGCCCCCAGTCGGCGGCGAAGGAATCg                                                                                                                                                                                                                                                                              <  1:625073/82‑1 (MQ=255)                                                                                                                                                                                                   caGTTTCAGTTCGCAATTACAGTCGGCTTCAAAGGCTTTTTTAACCACCGGACCAGGCCCCCAGTCGGCGGCGAAGGAATCGTAGGTATAAACAGTCAGAACGGGTTTAGCGAAAACGGGCGCTGTGCACAGCAACAGCAGGGGCAGACAt                                                                                                                                                                                                         <  1:103600/151‑1 (MQ=255)                                                                                                                                                                                                      tttCAGTTCGCAATTACAGTCGGCTTCAAAGGCTTTTTTAACCACCGTACCAGGCCCCCAGTCGGCGGCGAAGGAATCGTAGGTATAAACAGTCAGAACGGGTTTAGCGAAAACg                                                                                                                                                                                                                                          >  1:678416/1‑115 (MQ=255)                                                                                                                                                                                                          aGTTCGCAATTACAGTCGGCTTCAAAGGCTTTTTTAACCACCGGACCAGGCCCCCAGTCGGCGGCGAAGGAATCGTAGGTATAAACAGTCAGAACGGGTTTAGCGAAAACGGgcg                                                                                                                                                                                                                                      <  2:678407/115‑1 (MQ=255)                                                                                                                                                                                                              cGCAATTACAGTCGGCTTCAAAGGCTTTTTTAACCACCGGACCAGGCCCCCAGTCGGCGGCGAAGGgatttgaggctccttctcaagtcctttgccactcttttttgaggtgcaaagtgttaaaaaaatgtctgcccct                                                                                                                                                                                                          >  1:638155‑M1/1‑66 (MQ=255)                                                                                                                                                                                                                cAATTACAGTCGGCTTCAAAGGCTTTTTTAACCACCGGACCAGGCCCCCAGTCGGCGGCGAAGGgatttgaggct                                                                                                                                                                                                                                                                        >  2:433681‑M1/1‑64 (MQ=255)                                                                                                                                                                                                                cAATTACAGTCGGCTTCAAAGGCTTTTTTAACCACCGGACCAGGCCCCCAGTCGGCGGCGAAGGgatttgagg                                                                                                                                                                                                                                                                          >  2:280867‑M1/1‑64 (MQ=255)                                                                                                                                                                                                                cAATTACAGTCGGCTTCAAAGGCTTTTTTAACCACCGGACCAGGCCCCCAGTCGGCGGCGAAGGa                                                                                                                                                                                                                                                                                  >  1:604400/1‑65 (MQ=255)                                                                                                                                                                                                                 caTTTCAGTCTCCTTCCAAGGCTTTTTTAACCACCGTACCAGGCCCCCAGTCGGCGGCGAAGGAATCGTAGGTATAAACAGTCAGAACGGGTTTAGCGAAAACTGGCGCTGTGCACAGCAACAGCAGGGGCAGACATTTTTTTAACACTTTGCACCTCAAAAAAGAGTGGCAAAGGACTTGAGAAGGAGCCTCAAATCCCTTCGCCGGCGTTATCCGGATCAGGTTCGACGGGTATTTTCTCAGCGCACGCGTACGCGTGGCACCCCGTTGAGaa                                                               <  1:189398/274‑1 (MQ=255)                                                                                                                                                                                                                  aTTACAGTCGGCTTCAAAGGCTTTTTTAACCACCGGACCAGGCCCCCAGTCGGCGGCGAAGGgatttgaggctccttctcaagtcctttgccactcttttttgaggtgcaaagtgttaaaaaaatgtctgcccctgctg                                                                                                                                                                                                      <  2:638146‑M1/139‑78 (MQ=255)                                                                                                                                                                                                                    tACAGTCGGCTTCAAAGGCTTTTTTAACCACCGGACCAGGCCCCCAGTCGGCGGCGAAGGgatttgaggctcctt                                                                                                                                                                                                                                                                    <  1:433688‑M1/75‑16 (MQ=255)                                                                                                                                                                                                                    tACAGTCGGCTTCAAAGGCTTTTTTAACCACCGGACCAGGCCCCCAGTCGGCGGCGAAGGgatttgaggctcc                                                                                                                                                                                                                                                                      <  1:280872‑M1/73‑14 (MQ=255)                                                                                                                                                                                                                    tACAGTCGGCTTCAAAGGCTTTTTTAACCACCGGACCAGGCCCCCAGTCGGCGGCGAAGGAATCg                                                                                                                                                                                                                                                                              <  2:604391/65‑1 (MQ=255)                                                                                                                                                                                                                       gtacgggtanaaaGGCTTTTTTAACCACCGGACCACGCACCCAGTGGGGGGCGAAGGAATCGTAGGTATAAACAGTAAGAACGGGTTTAGCGAAAACGGGCGCTGTGCACAGCAACAGCAGGGGCAGACATTTTTTTAACACTTTGCACCTCAAAAAAGAGTGGCAAAGGACTTGAGAAGGAGCCTCAAATCCCTTCGCCGGCGTTATCCGGATCAGGTTCGACGGGTATTTTCTCAGCGCACGCGTACGCGTGGCACCCCGTTGAGAACGGCGt                                                         <  2:258123/265‑1 (MQ=255)                                                                                                                                                                                                                       aGTCGGCTTCAAAGGCTTTTTTAACCACCGGGCCAGGCCCCCAGTCGGCGGCGAAGGAATCGTAGGTATAAACAGTCAGAACGGGTTTAGCGAAAACGGGCGCTGTGCACAGCAACAGCAGGGGCAGACATTTTTTTAACACTTTGCACCTCAAAAAAGAGTGGCAAAGGACTTGAGAAGGAGCCTCAAATCCCTTCGCCGGCGTTATCCGGATCAGGTTCGACGGGTATTTTCTCAGCGCACGCGTACGCGTGGCACCCCGTTGAGAACGGCGt                                                         <  1:159120/275‑1 (MQ=255)                                                                                                                                                                                                                             cTTCAAAGGCTTTTTTAACCACCGGACCAGGCCCCCAGTCGGCGGCGAAGGAATCGTAGGTATAAACAGTCAGAACGGGTTTAGCGa                                                                                                                                                                                                                                               >  2:210037/1‑87 (MQ=255)                                                                                                                                                                                                                                 aaaGGCTTTTTTAACCACCGGACCAGGCCCCCAGTCGGCGGCGAAGGAATCGTAGGTATAAACAGTCAGAACGGGTTTAGCGAAAAc                                                                                                                                                                                                                                           <  1:210041/87‑1 (MQ=255)                                                                                                                                                                                                                                   aGGCTTTTTTAACCACCGGACCAGGCCCCCAGTCGGCGGCGAAGGAATCGTAGGTATGAACAGTCAGAACGGGTTTAGCGAAAACGGGCGCTGTGCACAGCAACAGCAGGGGCAGACATTTTTTTAACACTTTGCACCTCAAAAAAGATTGTCAAAGGACTTGAGAAGGAGCCTCAAATCCCTTCGCCGGCGTTATCCGGCTCAGGTTCGACGGGTATTTTCTCAGCGCac                                                                                         >  1:174177/1‑231 (MQ=255)                                                                                                                                                                                                                                       ttttttAACCACCGGACCAGGCCCCCAGTCGGCGGCGAAGGAATCGTAGGTATAAACAGTCAGAACGGGTTTAGCGAAAACGGGCGCt                                                                                                                                                                                                                                    >  1:77764/1‑88 (MQ=255)                                                                                                                                                                                                                                       ttttttAACCACCGGACCAGGCCCCCAGTCGGCGGCGAAGGAATCGTAGGTATAAACAGTCAGAACGGGTTTAGCGAAAACGGGCGCTGTGCACAGCAACAGCAGGGGCAGACATTTTTTTAACACTTTGCACCTCAAAAAAGAGTGGCAAAGGACTTGAGAAGGAGCCTCAAATCCCTTCGCCGGCGTTATCCGGATCAGGTTCGACGGGTATTTTCTCAGCGCACGCGTACGCGTGGCACCCCGTTGAGAACGGCGTTAGTGTAGTGATTTTg                                         >  1:87781/1‑275 (MQ=255)                                                                                                                                                                                                                                           ttAACCACCGGACCAGGCCCCCAGTCGGCGGCGAAGGAATCGTAGGTATAAACAGTTAGAACGGGTTTAGCGAAAACGGGCGCTGTGc                                                                                                                                                                                                                                <  2:77763/88‑1 (MQ=255)                                                                                                                                                                                                                                               ccaccGGACCAGGCCCCCAGTCGGCGGCGAAGGAATCGTAGGTATAAACAGTCAGAACGGGTTTAGCGAAAACGGGCGCTGTGCACAGCAACAGCAGGGGCAGACATTTTTTTAACACTTTGCAc                                                                                                                                                                                       >  2:227892/1‑125 (MQ=255)                                                                                                                                                                                                                                                   cGGACCAGGCCCCCAGTCGGCGGCGAAGGAATCGTAGGTATAAACAGTCAGAACGGGTTTAGCGAAAACGGGCGCTGTGCACAGCAACAGCAGGGGCAGACATTTTTTTAACACTTTGCACCTCa                                                                                                                                                                                   <  1:227897/125‑1 (MQ=255)                                                                                                                                                                                                                                                    cgcagaGGCCCCCCGTCGGCGGCGCAGGAATCGTAGGTATAAACAGTCAGGTCTGGTTTATCGACAACGGGCGCTGTGCACAGCAACAGCAGCGGCAGACATTTTTTTAACACTTTGCACCTCAAAAAAGAGTGGCAAAGGACTTGAGAAGGAACCTCAAATCCCTTCGCCGTCGTTATCCGGATCAGGTTCGACGGGTATTTTCTCAGCGCACGCGTACGCGTGGCACCCCGTTGAGAACGGCGTTAGTGTAGTGATTTTGTTATCAACCAg                              <  2:91011/268‑1 (MQ=255)                                                                                                                                                                                                                                                          ggCCCCCAGTCGGCGGCGAAGGAATCGTAGGTATAAACAGTCAGAACGGGTTTAGCGAAAACGGGCGCTGTGCACAGCAACAGCAGGGGCAGACATTTTTTTAACACTTTGCACCTCAAAAAAGAGTGGCAAAGGACTTGAGAAGGAGCCTCAAATCCCTTCGCCGGCGt                                                                                                                               >  2:489257/1‑170 (MQ=255)                                                                                                                                                                                                                                                           gCCCCCAGTCGGCGGCGAAGGAATCGTAGGTATAAACAGTCAGAACGGGTTTAGCGAAAACGGGCGCTGTGCACAGCAACAGCAGGGGCAGACATTTTTTTAACACTTTGCACCTCAAAAAAGAGTGGCAAAGGACTTGAGAAGGAGCCTCAAATCCCTTCGCCGGCGTTATCCGGATCAGGTTCGACGGGTATTTTCTCAGCGCACGCGTACGCGTGGCACCCCGTTGAGAAGGGAGTTAGTGTAGTGATTTTGTTCTCAACNAGCacttctgc                     >  2:57988/1‑268 (MQ=255)                                                                                                                                                                                                                                                              cccAGTCGGCGGCGAAGGAATCGTAGGTATAAACAGTCAGAACGGGTTTAGCGAAAACGGGCGCTGTGCACAGCAACAGCAGGGGCAGACATTTTTTTAACACTTTGCACCTCAAAAAAGAGTGGCAAAGGACTTGAGAAGGAGCCTCAAATCCCTTCGCCGGCGTTATc                                                                                                                           <  1:489264/170‑1 (MQ=255)                                                                                                                                                                                                                                                                cAGTCGGCGGCGAAGGAATCGTAGGTATAAACAGTCAGAACGGGTTTAGCGAAAACGGGCGCTGTGCACAGCAACAGCAGGGGCAGACATTTTTTTAACACTTTGCACCTCAAAAAATAGTGGCAAAGGACTTGAGAAGGAGCCTCAAATCCCTTCGCCGGCGTTATCCGGATCAGGTTCGACGGGTATTTTCTCAGCGCACGCGTACGCGTGGCACCCCGTTGAGAACGGCGTTAGTGTAGTGAATTTGTTATCAACCAGAAATCATGGATCCg                >  1:173084/1‑275 (MQ=255)                                                                                                                                                                                                                                                                     ggcggcGAAGGAATCGTAGGTATAAACAGTCAGAACGGGTTTAGCGAAAACGGGCGCTGTGCACAGCAACAGCAGGGGCAGACATTTTTTTAACACTTTGCACCTCAAAAAAGAGTGGCa                                                                                                                                                                      >  2:709694/1‑120 (MQ=255)                                                                                                                                                                                                                                                                      ggtGCGAANGAATCGTAGGTATAAACAGGCAGAACGGGTTTAGCGAAAACGGGCGCTGTGCACAGCAACAGCAGGGGCAGACATTTTTTTAACACTTTGCACCTCAAAAAAGAGTGGCAAAGGACTTGAGAAGGAGCCTCAAATCCCTTCGCCGGCGTTATCCGGATCAGGTTCGACGGGTATTTTCTCAGCGCACGCGTACGCGTGGCACCCCGTTGAGAACGGCGTTAGTGTAGTGATTTTGTTATCAACCAGCAATCATGGATCCGGTGgc           >  2:270078‑M1/4‑274 (MQ=255)                                                                                                                                                                                                                                                                        GGCGAAGGAATCGTAGGTATAAACAGTCAGAACGGGTTTAGCGAAAACGGGCGCTGTGCACAGCAACAGCAGGGGCAGACATTTTTTTAACACTTTGCACCTCAAAAAAGAGTGGCAAAGGACTTGAGAAGGAGCCTCAAATCCCTTCGCCGGCGTTATCCGGATCAGGTTCGACGGGTATTTTCTCAGCGCACGCGTACGCGTGGCACCCCGTTGAGAACGGCGTTAGTGTAGTGATTTTGTTATCAACCAGCAATCATGGATCCGGTGgcgc         <  1:270083‑M1/274‑1 (MQ=255)                                                                                                                                                                                                                                                                         gcgAAGGgatttgaggctccttctcaagtcctttgccactcttttttgaggtgcaaagtgttaaaaaaatgtctgcccctgctgttgctgtgcacagcgcc                                                                                                                                                                                     >  1:305053‑M1/1‑7 (MQ=255)                                                                                                                                                                                                                                                                         gcgAAGGgatttgaggctccttctcaagtcctttgccactcttttttgagg                                                                                                                                                                                                                                       >  1:185514‑M1/1‑7 (MQ=255)                                                                                                                                                                                                                                                                         GCGAAGGAATCGTAGGTATAAACAGTCAGAACGGGTTTAGCGAAAACGGGCGCTGTGCACAGCAACAGCAGGGGCAGACATTTTTTTAACACTTTGCACCTCAAAAAAGAGTGGCAAAgg                                                                                                                                                                  >  1:709704‑M1/1‑120 (MQ=255)                                                                                                                                                                                                                                                                             aGGgatttgaggctccttctcaagtcctttgccactcttttttgaggtgcaaagtgttaaaaaaatgtctgcccctgctgttgctgtgcacagcgcccgtt                                                                                                                                                                                 <  2:305047‑M1/101‑99 (MQ=255)                                                                                                                                                                                                                                                                             aGGgatttgaggctccttctcaagtcctttgccactcttttttgaggtgca                                                                                                                                                                                                                                   <  2:185511‑M1/51‑49 (MQ=255)                                                                                                                                                                                                                                                                              gggatttgatgccccttctcaagtcctttgccactcttttttgaggacaaaagtgtctaaaaactatctgaccctgctgttgctgtgcacagcgcccgttttcgctaaacccgttctgactgtttatacctacgattccttcgccgccgactgggggcctggtccggtggttaaaaaagcctttgaagtcgactgtaattgcaaactgaaccgggtggggctggaagatggcgtttggcgtcacaaccgtatacggagggacagcaaaaacaaaa  >  2:602619‑M1/1‑2 (MQ=255)                                                                                                                                                                                                                                                                               |                                                                                                                                                                                                                                                                                  GGTACGAAAGTGTCATTATTCCAGCCGCCGGGAACGTTAACGGCATCCGCTGCCACACCGCTTTTGGCAAACAGTCCGGTTTTACTGGCGGCGTCTAACAGGTTGTTATCCAGCCCCAGCACCACATCGGCTTTACTGTTTTTGCCTTCCATCCGTAGACGGTTGAGAAGCGAAACGCCATCTTCCAGCGCCACCAGTTTCAGTTCGCAATTACAGTCGGCTTCAAAGGCTTTTTTAACCACCGGACCAGGCCCCCAGTCGGCGGCGAAGGAATCGTAGGTATAAACAGTCAGAACGGGTTTAGCGAAAACGGGCGCTGTGCACAGCAACAGCAGGGGCAGACATTTTTTTAACACTTTGCACCTCAAAAAAGAGTGGCAAAGGACTTGAGAAGGAGCCTCAAATCCCTTCGCCGGCGTTATCCGGATCAGGTTCGACGGGTATTTTCTCAGCGCACGCGTACGCGTGGCACCCCGTTGAGAACGGCGTTAGTGTAGTGATTTTGTTATCAACCAGCAATCATGGATCCGGTGGCGCAAACCAC  >  CP009273/71612‑72155

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.