New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP009273	= 71882	43 (1.120)	11 (0.300)	7/296	NT	19.0%	coding (86/984 nt)	thiB	thiamine‑, thiamine pyrophosphate‑, thiamine monophosphate‑binding ABC transporter periplasmic protein; ThiBPQ thiamine, thiamine pyrophosphate importer
	?	CP009273	= 72017	53 (1.460)					intergenic (‑50/+114)	thiB/sgrR	thiamine‑, thiamine pyrophosphate‑, thiamine monophosphate‑binding ABC transporter periplasmic protein; ThiBPQ thiamine, thiamine pyrophosphate importer/transcriptional DNA‑binding transcriptional activator of sgrS sRNA

TACTGTTTTTGCCTTCCATCCGTAGACGGTTGAGAAGCGAAACGCCATCTTCCAGCGCCACCAGTTTCAGTTCGCAATTACAGTCGGCTTCAAAGGCTTTTTTAACCACCGGACCAGGCCCCCAGTCGGCGGCGAAGGAATCGTAGGTATAAACAGTCAGAACGGGTTTAGCGAAAACGGGCGCTGTGCACAGCAACAGCAGGGGCAGACATTTTTTTAACACTTTGCACCTCAAAAAAGAGTGGCAAAGGACTTGAGAAGGAGCCTCAAATCCCTTCGCCGGCGTTATCCGGATCAGGTTCGACGGGTATTTTCTCAGCGCACGCGTACGCGTGGCACCCCGTTGAGAACGGCGTTAGTGTAGTGATTTTGTTATCAACCAGCAATCATGGATCCGGTGGCGCAAACCACGCTGATTTAAAATCGAACCAGCCGAGGGTATTCATGCGCAGGCCGCGCATACTGCGTTGCCCCTGAATGATCAGCCAGTGGTGCAATAATGGCACCATCGCTTTGCTGGCGACCAGTTGCTGGCA  >  CP009273/71745‑72280                                                                                                                                                                                                                                                                                 |                                                                                                                                                                                                                                                                        ttttgttTTTGCTGTCCCTCCGTATACGGTTGTGACGCCAAACGCCATCTTCCAGCCCCACCCGGTTCAGTTTGCAATTACAGTCGACTTCAAAGGCTTTTTTAACCACCGGACCAGGCCCCCAGTCGGCGGCGAAGGAATCGTAGGTATAAACAGTCAGAACGGGTTTAGCGAAAACGGGCGCTGTGCACAGCAACAGCAGGGTCAGATAGTTTTTAGACACTTTTGTCCTCAAAAAAGAGTGGCAAAGGACTTGAGAAGGGGCATCAAATCcc                                                                                                                                                                                                                                                                       >  2:602619‑M2/4‑273 (MQ=255)                                                       gcgcCACCAGTTTCAGTTCGCAATTACAGTCGGCTTCAAAGGCTTTTTTAACCACCGGACCAGGCCCCCAGTCGGCGGCGAAGGAATCGTANGTATAAACAGTCAGAACGAGTTTAGCGAAAACGGGCGCTGTGCACAGCAACAGCAGGGGCAGACATTTTTTTAACACTTTGCACCTCAAAAAAGAGTGGCAAAGGACTTGAGAAGGAGCCTCAAATCCCTTCGCCGGCGTTATCCGGATCAGGTTCGACGGGTATTCTCTCAGCGCacgcgta                                                                                                                                                                                                                 <  1:537200/275‑1 (MQ=255)                                                                            caTTTCAGTCTCCTTCCAAGGCTTTTTTAACCACCGTACCAGGCCCCCAGTCGGCGGCGAAGGAATCGTAGGTATAAACAGTCAGAACGGGTTTAGCGAAAACTGGCGCTGTGCACAGCAACAGCAGGGGCAGACATTTTTTTAACACTTTGCACCTCAAAAAAGAGTGGCAAAGGACTTGAGAAGGAGCCTCAAATCCCTTCGCCGGCGTTATCCGGATCAGGTTCGACGGGTATTTTCTCAGCGCACGCGTACGCGTGGCACCCCGTTGAGaa                                                                                                                                                                                            <  1:189398/274‑1 (MQ=255)                                                                                  gtacgggtanaaaGGCTTTTTTAACCACCGGACCACGCACCCAGTGGGGGGCGAAGGAATCGTAGGTATAAACAGTAAGAACGGGTTTAGCGAAAACGGGCGCTGTGCACAGCAACAGCAGGGGCAGACATTTTTTTAACACTTTGCACCTCAAAAAAGAGTGGCAAAGGACTTGAGAAGGAGCCTCAAATCCCTTCGCCGGCGTTATCCGGATCAGGTTCGACGGGTATTTTCTCAGCGCACGCGTACGCGTGGCACCCCGTTGAGAACGGCGt                                                                                                                                                                                      <  2:258123/265‑1 (MQ=255)                                                                                  aGTCGGCTTCAAAGGCTTTTTTAACCACCGGGCCAGGCCCCCAGTCGGCGGCGAAGGAATCGTAGGTATAAACAGTCAGAACGGGTTTAGCGAAAACGGGCGCTGTGCACAGCAACAGCAGGGGCAGACATTTTTTTAACACTTTGCACCTCAAAAAAGAGTGGCAAAGGACTTGAGAAGGAGCCTCAAATCCCTTCGCCGGCGTTATCCGGATCAGGTTCGACGGGTATTTTCTCAGCGCACGCGTACGCGTGGCACCCCGTTGAGAACGGCGt                                                                                                                                                                                      <  1:159120/275‑1 (MQ=255)                                                                                              aGGCTTTTTTAACCACCGGACCAGGCCCCCAGTCGGCGGCGAAGGAATCGTAGGTATGAACAGTCAGAACGGGTTTAGCGAAAACGGGCGCTGTGCACAGCAACAGCAGGGGCAGACATTTTTTTAACACTTTGCACCTCAAAAAAGATTGTCAAAGGACTTGAGAAGGAGCCTCAAATCCCTTCGCCGGCGTTATCCGGCTCAGGTTCGACGGGTATTTTCTCAGCGCac                                                                                                                                                                                                                      >  1:174177/1‑231 (MQ=255)                                                                                                  ttttttAACCACCGGACCAGGCCCCCAGTCGGCGGCGAAGGAATCGTAGGTATAAACAGTCAGAACGGGTTTAGCGAAAACGGGCGCTGTGCACAGCAACAGCAGGGGCAGACATTTTTTTAACACTTTGCACCTCAAAAAAGAGTGGCAAAGGACTTGAGAAGGAGCCTCAAATCCCTTCGCCGGCGTTATCCGGATCAGGTTCGACGGGTATTTTCTCAGCGCACGCGTACGCGTGGCACCCCGTTGAGAACGGCGTTAGTGTAGTGATTTTg                                                                                                                                                                      >  1:87781/1‑275 (MQ=255)                                                                                                               cgcagaGGCCCCCCGTCGGCGGCGCAGGAATCGTAGGTATAAACAGTCAGGTCTGGTTTATCGACAACGGGCGCTGTGCACAGCAACAGCAGCGGCAGACATTTTTTTAACACTTTGCACCTCAAAAAAGAGTGGCAAAGGACTTGAGAAGGAACCTCAAATCCCTTCGCCGTCGTTATCCGGATCAGGTTCGACGGGTATTTTCTCAGCGCACGCGTACGCGTGGCACCCCGTTGAGAACGGCGTTAGTGTAGTGATTTTGTTATCAACCAg                                                                                                                                                           <  2:91011/268‑1 (MQ=255)                                                                                                                     ggCCCCCAGTCGGCGGCGAAGGAATCGTAGGTATAAACAGTCAGAACGGGTTTAGCGAAAACGGGCGCTGTGCACAGCAACAGCAGGGGCAGACATTTTTTTAACACTTTGCACCTCAAAAAAGAGTGGCAAAGGACTTGAGAAGGAGCCTCAAATCCCTTCGCCGGCGt                                                                                                                                                                                                                                                            >  2:489257/1‑170 (MQ=255)                                                                                                                      gCCCCCAGTCGGCGGCGAAGGAATCGTAGGTATAAACAGTCAGAACGGGTTTAGCGAAAACGGGCGCTGTGCACAGCAACAGCAGGGGCAGACATTTTTTTAACACTTTGCACCTCAAAAAAGAGTGGCAAAGGACTTGAGAAGGAGCCTCAAATCCCTTCGCCGGCGTTATCCGGATCAGGTTCGACGGGTATTTTCTCAGCGCACGCGTACGCGTGGCACCCCGTTGAGAAGGGAGTTAGTGTAGTGATTTTGTTCTCAACNAGCacttctgc                                                                                                                                                  >  2:57988/1‑268 (MQ=255)                                                                                                                         cccAGTCGGCGGCGAAGGAATCGTAGGTATAAACAGTCAGAACGGGTTTAGCGAAAACGGGCGCTGTGCACAGCAACAGCAGGGGCAGACATTTTTTTAACACTTTGCACCTCAAAAAAGAGTGGCAAAGGACTTGAGAAGGAGCCTCAAATCCCTTCGCCGGCGTTATc                                                                                                                                                                                                                                                        <  1:489264/170‑1 (MQ=255)                                                                                                                           cAGTCGGCGGCGAAGGAATCGTAGGTATAAACAGTCAGAACGGGTTTAGCGAAAACGGGCGCTGTGCACAGCAACAGCAGGGGCAGACATTTTTTTAACACTTTGCACCTCAAAAAATAGTGGCAAAGGACTTGAGAAGGAGCCTCAAATCCCTTCGCCGGCGTTATCCGGATCAGGTTCGACGGGTATTTTCTCAGCGCACGCGTACGCGTGGCACCCCGTTGAGAACGGCGTTAGTGTAGTGAATTTGTTATCAACCAGAAATCATGGATCCg                                                                                                                                             >  1:173084/1‑275 (MQ=255)                                                                                                                                 ggtGCGAANGAATCGTAGGTATAAACAGGCAGAACGGGTTTAGCGAAAACGGGCGCTGTGCACAGCAACAGCAGGGGCAGACATTTTTTTAACACTTTGCACCTCAAAAAAGAGTGGCAAAGGACTTGAGAAGGAGCCTCAAATCCCTTCGCCGGCGTTATCCGGATCAGGTTCGACGGGTATTTTCTCAGCGCACGCGTACGCGTGGCACCCCGTTGAGAACGGCGTTAGTGTAGTGATTTTGTTATCAACCAGCAATCATGGATCCGGTGgc                                                                                                                                        >  2:270078‑M1/4‑274 (MQ=255)                                                                                                                                   GGCGAAGGAATCGTAGGTATAAACAGTCAGAACGGGTTTAGCGAAAACGGGCGCTGTGCACAGCAACAGCAGGGGCAGACATTTTTTTAACACTTTGCACCTCAAAAAAGAGTGGCAAAGGACTTGAGAAGGAGCCTCAAATCCCTTCGCCGGCGTTATCCGGATCAGGTTCGACGGGTATTTTCTCAGCGCACGCGTACGCGTGGCACCCCGTTGAGAACGGCGTTAGTGTAGTGATTTTGTTATCAACCAGCAATCATGGATCCGGTGgcgc                                                                                                                                      <  1:270083‑M1/274‑1 (MQ=255)                                                                                                                                            aacGTAGGGATAAACCGTCAGAACGGGTTTGGCGAAACCGGGGGCTGTGCACAGCAACAGCAGGGGCAGACATTTTTTTAACACTTTGCACCTCAAAAAAGAGTGGCAAAGGACTTGAGAAGGAGCCTCAAATCCCTTCGCCGGCGTTATCCGGATCAGGTTCGACGGGTATTTTCTCAGCGCACGCGTACGCGTGGCACCCCGTTGAGAACGGCGTTAGTGTAGTGATTTTGTTATCAACCAGCAATCATGGATCCGGTGGCGCAAACCACGc                                                                                                                             <  2:660021/272‑1 (MQ=255)                                                                                                                                                  ggTATAAACAGTCAGAACGGGTTTAGCGAAAACGGGCGCTGTGCACAGCAACAGCAGGGGCAGACATTTTTTTAACACTTTGCACCTCAAAAAAGAGTGGCAAAGGACTTGAGAAGGAGCCTCAAATCCCTTCGCCGGCGTTATCCGGATCAGGTTCGACGGGTATGTTCTCAGCGCACGCGTACGCGTGGCACCCCGTTGAGACCGGCGTGAGTGTAGTGATTTTGTTATCAAACCGCAATCATGGATCAGGTGGCTCAACGCACGGTGAttg                                                                                                                       >  2:714471/1‑273 (MQ=255)                                                                                                                                                     ataAACAGTCAGAACGGGTTTAGCGAAAACGGGCGCTGTGCACAGCAACAGCAGGGGCAGACATTTTTTTAACACTTTGCACCTCAAAAAAGAGTGGCAAAGGACTTGAGAAGGAGCCTCAAATCCCTTCGCCGGCGTTATCCGGATCAGGTTCGACGGGTATTTTCTCAGCGCACGCGTACGCGTGGCACCCCGTTGAGAACGGCGTTAGTGTAGTGATTTTGTTATCAACCAGCAATCATGGATCCGGTGGAGCAAACCACGCTGATTTaaaa                                                                                                                   >  1:135223/1‑275 (MQ=255)                                                                                                                                                     ataAACAGTCAGAACGGGTTTAGCGAAAACGGGCGCTGTGCACAGCAACAGCAGGGGCAGACATTTTTTTAACACTTTGCACCTCAAAAAAGAGTGGCAAAGGACTTGAGAAGGAGCATCAAATCccttcgccgccgactgggggcctggtccggtggttaaaaaagcctttgaagccgactgtaattgcgaactgaaactggtggcgctggaagatggcgtttcgcttccccaccgtctacggctggaaggcaaaaacagtaaagccgatgggg                                                                                                                   <  1:342621‑M2/275‑151 (MQ=255)                                                                                                                                                     ataAACAGTCAGAACGGGTCTAGCGAAAACGGGCGCTGTGCACAGCAACAGCAGGGGCAGACATTTTTTTAACACTTTGCACCTCAAAAAAGAGTGGCAAATGACTTGAGAAGGAGCCTCAAATCCCTTCGCCGGCGTTATCCGGATCAGGTTCGACGGGTATTTTCTCAGCGCACGCGTACGCGTGGCACCCCGTTGAGAACGACGtt                                                                                                                                                                                     >  1:573467/1‑209 (MQ=255)                                                                                                                                                      taAACAGTCAGAACGGGTTTAGCGAAAACGGGCGCTGTGCACAGCAACAGCAGGGGCAGACATTTTTTTAACACTTTGCACCTCAAAAAAGAGTGGCAAAGGACTTGAGAAGGAGCCTCAAATCCCTTCGCCGGCGTTATCCGGATCCGGTTCGACGGNTATTTTCTCAGCGCACGCGTACGCGTGGCACCCCGTTGAGAACGGCGTTAGTGTAGTGATTTTGTTATCAACCAGCAATCATGGATCCGGTGGCGCAAAcc                                                                                                                                 >  1:660030/1‑260 (MQ=255)                                                                                                                                                          cAGTCAGAACGGGTTTAGCGAAAACGGGCGCTGTGCACAGCAACAGCAGGGGCAGACATTTTTTTAACACTTTGCACCTCAAAAAAGAGTGGCAAAGGACTTGAGAAGGAGCCTCAAATCCCTTCGCCGGCGTTATCCGGATCAGGTTCGACGGGTATTTTCTCAGCGCACGCGTACGCGTGGCACCCCGTTGAGAACGGCGTTAGTGTAGTGATTTTGTTATCAACCAGCAATCATGGCACCGGTGGAGCCAACCACGCTGATTCAAAATCGaa                                                                                                              >  2:684019/1‑275 (MQ=255)                                                                                                                                                                gAACGGGTTCAGCGAAAACGGGCGTTGTGCACAGCAACAGCAGGGGCAGAAATTTTTTTAACACTTTGCACCTCAAAAAAGAGTGGCAAAGGACTTGGGAAGGAGCCTCAAATCCCTTCGCCGGCGTTATCCGGATCAGGTTCGACGGGTATTTTCTCAGCGCACGCGTACGCGTGGCACCCCGTTGAGAACGGCGTTAGTGTAGTGATTTTGTTATCAACCAGCAATCATGGATCCGGTGGCGCAAACCACGCTGATTTAAAATCGAACCAGcc                                                                                                        <  1:418882/275‑1 (MQ=255)                                                                                                                                                                  aCGGGTTTAGCGGAAACGGACGCTTTTCACAAAAACAGCAGGGGCATACATTTTTTTAACACTTTGAACCTCAAAAAATAGTGGCAAAGGACTTGGGAAGGAGCCTCAAATCCCTTCGCCGGCGTTATCCGGATCAGGTTCGACGGGTATTTTCTCAGCGCACGCGTACGCGTGGCACCCCGTTGAGAACGGCGTTAGTGTAGTGATTTTGTTATCAACCAGCAATCATGGATCCGGTGGCGCAAACCACGCTGATTTAAAATCGAACCAGcc                                                                                                        <  2:173081/273‑1 (MQ=255)                                                                                                                                                                    cggattAGCGAANGCGGGCCCTGTACACAGCACCAGCAGGGGCTGACATTTTTTTAACACTTTGCCCCTTAAAAAAGAGTGGCAAGTGACTTGGGAAGGAGCCTCAAATCCCTTCGCCCGCGTTATCCGGATCAGGTTCGACCGGTATTTTCTCAGCGCACGCGTACGCGTGGCACCCCGTTGAGAACGGCGTTAGTGTAGTGATTTTGTTATCAACCAGCAATCATGGATCCGGTGGCGCAAACCACGCTGATTTAAAATCGAACCAGCCGa                                                                                                      <  2:531502/269‑1 (MQ=255)                                                                                                                                                                         tAGCGAAAACGGGCGCTGTGCACAGCAACAGCAGGGGCAGATATTTTTTTAACACTTTGCACCTCAAAAAAGAGTGGCAAAGGACTTGAGAAGGAGCCTCAAATCccttcgccgccgactgggggcctggtccggtggttaaaaaagcctttgaagccgactgtaattgcgaactgaaactggtggcgctggaagatggcgtttcgcttctcaaccgtctacggatggaaggcaaaa                                                                                                                                     >  1:698040‑M2/1‑105 (MQ=255)                                                                                                                                                                           gCGAAAACGGGCGCTGTGCACAGCAACAGCAGGGGCAGACATTTTTTTAACACTTTGCACCTCAAAAAAGAGTGGCAAAGGACTTGAGAAGGAGCCTCAAATCCCTTCGCCGGCGTTATCCGGATCAGGTTCGACGGGTATTTTCTCAGCGCACGCGTACGCGTgg                                                                                                                                                                                                          >  2:198916/1‑166 (MQ=255)                                                                                                                                                                               aaaCGGGCGCTGTGCACAGCAACAGCAGGGGCAGACATTTTTTTAACACTTTGCACCTCAAAAAAGAGTGGCAAAGGACTTGAGAAGGAGCCTCAAATCCCTTCGCCGGCGTTATCCGGATCAGGTTCGACGGGTATTTTCTCAGCGCACGCGTACGCGTGGCAcc                                                                                                                                                                                                      <  1:198919/166‑1 (MQ=255)                                                                                                                                                                                aaCGGGCGCTGTGCACAGCAACAGCAGGGGCAGACATTTTTTTAACACTTTGCACCTCAAAAAAGAGTGGCAAAGGACTTGAGAAGGAGCCTCAAATCcct                                                                                                                                                                                                                                                                      <  2:305047‑M2/101‑4 (MQ=255)                                                                                                                                                                                aaCGGGCGCTGTGCACAGCAACAGCAGGGGCAGACATTTTTTTAACACTTTGCACCTCAAAAAAGAGTGGCAAAGGACCTGAGAAGGAGCCTCAAATCCCTTCGCCGGCGTTATCCGGATCAGGTTCGACGGGTATTTTCTCAGCGCACGCGTACGCGTGGCACCCCGTTGAGAACGGCGTTAGTGTAGTGATTTTGTTATCAACCAGCAATCATGGATCCGGTGGCGCAAACCACGCTGATTTAAAATCGAACCAGCCGAGGGTATTCATgcg                                                                                         <  1:684028/274‑1 (MQ=255)                                                                                                                                                                                    ggCGCTGTGCACAGCAACAGCAGGGGCAGACATTTTTTTAACACTTTGCACCTCAAAAAAGAGTGGCAAAGGACTTGAGAAGGAGCCTCAAATCccttcgc                                                                                                                                                                                                                                                                  >  1:305053‑M2/1‑94 (MQ=255)                                                                                                                                                                                      cgcttggCACAGCAACAGCAGTGGCAGACATTTTTTTAACACTTTGCACCTCAAAAAAGAGTGGTAAAGGACTTTAGAAGGAGCCTCAAATNCCTTCGCCGGCGTTATCCGCATCAGGTTCGACGGGTATTTTCTCAGCGCACGCGTACTCGTGGCACCCCGTTGAGAACGGCGTTAGTGTAGTGATTTTGTTATCAACCAGCAATCATGGATCCGGTGGCGCAAACCACGCTGATTTAAAATCGAACCAGCCGAGGTTATTCATGCGCAGGCcg                                                                                  <  1:552588/269‑1 (MQ=255)                                                                                                                                                                                      agctggaccanacaacagacGGGGCCGACCTTTGTTTACCACTTTCCCCACCAGAAAAGAGTGGCAAAGGTCTTGAACAGGAGCCTCACATCCCTTCGCCGGCCGTATTCGGATCAGGTTCGACGGGTATTTTATCAGCTCACGCGTACGCGTGGCACCTCGTTGATAACGGCGTTAGTGTAGTGATGTTGTTATCAACCAGCAATCATGGATCCGGTGGCGCAATCCACGCTGATTTAAAAACGAACCAGCCGAGGGTATTCATGCGCAGGcc                                                                                   <  2:52643/262‑1 (MQ=255)                                                                                                                                                                                                    gcggaagGGGCAGACATTTTTTTAACACTTTGCACCTCAAAAAAGAGTGGCAAAGGACTTGAGAAGGAGCCTCAAATCCCTTCGCCGGCGTTATCCGGATCAGGTTCGACGGGTATTTTCTCAGCGCACGCGTACGCGTGGCACCCCGTTGAGAACGGCGTTAGTGTAGTGATTTTGTTATCAACCAGCAATCATGGATCCGGTGGCGCAAACCACGCTGATTTAAAATCGAACCAGCCGAGGGTATTCATGCGCAGGCCGCGCATACTGCGtt                                                                     <  2:87780/269‑1 (MQ=255)                                                                                                                                                                                                     cagcagGGGCAGACATTTTTTTAACACTTTGCACCTCAAAAAAGAGTGGCAAAGGACTTGAGAAGGAGCCTCAAATCccttcgccgccgactgggggcctggtccggtggttaaaaaagcctttgaagccgactgtaat                                                                                                                                                                                                           <  2:638146‑M2/139‑63 (MQ=255)                                                                                                                                                                                                     cagcagGGGCAGACATTTTTTTAACACTTTGCACCTCAAAAAAGAGTGGCAAAGGACTTGAGAAGGAGCCTCAAATCCCTTCGCCGGCGTTATCCGGATCAGGTTCGACGGGTATTTTCTCAGCGCACGCGTACGCGTGGCACCCCGTTGAGACCTGCGTTAGTGTAGTGATTTTGTTATCAACCAGCACTCATGGATCCGGCGGCGCAAACATCGCTGATTTAAAATCGAACCAGCCGTGGGTATGCATTCGCAGGCCGCGCATACTGCgggg                                                                    >  2:194522/1‑271 (MQ=255)                                                                                                                                                                                                         agGGGCAGACATTTTTTTAACACTTTGCACCTCAAAAAAGAGTGGCAAAGGACTTGAGAAGGAGCCTCAAATCccttcgccgccgactgggggcctggtccggtggttaaaaaagcctttgaagccgactgtaattgcg                                                                                                                                                                                                       >  1:638155‑M2/1‑73 (MQ=255)                                                                                                                                                                                                          ggggCAGACATTTTTTTAACACTTTGCACCTCAAAAAAGAGTGGCAAAGGACTTGAGAAGGAGCCTCAAATCCCTTCGCCGGCGTTATCCGGATCAGGTTCGACGGGTATTTTCTCAGCGCACGCGTACGCGTGGCACCCCGTTGAGAACGGCGTTAGTGTAGTGATTTTGTTATc                                                                                                                                                                 >  2:209477/1‑176 (MQ=255)                                                                                                                                                                                                          ggggCAGACATTTTTTTAACACTTTGCACCTAAAAAAAGAGTGGCAAAGGACTTGAGAAGGAGCCTCAAAGCCCTTCGCCGGCGTTATCCGGATCAGGTTCGACGGGTATTTTCTCAGCGCACGCGTACGCGTGGCACCCCGTTGAGAACGGCGTTAGTGTAGTGATTTTGTTATCAACCAGCAATCATGGATCCGGTGGCGCAAACCACGCTGATTTAAAATCGAACCAGCCGAGGGTATTCATGCGCAGGCCGCGCATACTGCGTTGCCCCt                                                               <  1:343885/274‑1 (MQ=255)                                                                                                                                                                                                            ggCAGACATTTTTTTAACACTTTGCACCTCAAAAAAGAGTGGCAAAGGACTTGAGAAGGAGCCTCAAATCCCTTCGCCGGCGTTATCCGGATCAGGTTCGACGGGTATTTTCTCAGCGCACGCGTACGCGTGGCACCCCGTTGAGAACGGCGTTAGTGTAGTGATTTTGTTAt                                                                                                                                                                  >  2:221498/1‑173 (MQ=255)                                                                                                                                                                                                            ggCAGACATTTTTTTAACACTTTGCACCTCAAAAAAGAGTGGCAAAGGACTTGAGAAGGAGCCTCAAATCCCTTCGCCGGCGTTATCCGGATCAGGTTCGACGGGTATTTTCTCAGCGCACGCGTACGCGTGGCACCCCGTTGAGAACGGCGTTAGTGTAGTGATTTTGTTATCAACCAGCAATCATGGATCCGGTGGCGCAAAcc                                                                                                                                 >  2:245818/1‑206 (MQ=255)                                                                                                                                                                                                              cAGACATTTTTTTAACACTTTGCACCTCAAAAAAGAGTGGCAAAGGACTTGAGAAGGAGCCTCAAATCCCTTCGCCGGCGTTATCCGGATCAGGTTCGACGGGTATTTTCTCAGCGCACGCGTACGCGTGGCACCCCGTTGAGAACGGCGTTAGTGTAGTGATTTTGTTATCAAcc                                                                                                                                                             <  1:209481/176‑1 (MQ=255)                                                                                                                                                                                                                gACATTTTTTTAACACTTTGCACCTCAAAAAAGAGTGGCAAAGGACTTGAGAAGGAGCCTCAAATCCCTTCGCCGGCGTTATCCGGATCAGGTTCGACGGGTATTTTCTCAGCGCACGCGTACGCGTGGCACCCCGTTGAGAACGGCGTTAGTGTAGTGATTTTGTTATCAAc                                                                                                                                                              <  1:221503/173‑1 (MQ=255)                                                                                                                                                                                                                gACATTTTTTTAACACTTTGCACCTCAAAAAAGAGTGGCAAAGGACTTGAGAAGGAGCCTCAAATCCCTTCGCCGGCGTTATCCGGATCAGGTTCGACGGGTATTTTCTCAGCGCACGCGTACGCGTGGCACCCCGTTGAGAACGGCGTTAGTGTAGTGATTTTGTTATCAACCAGCAATCATGGATCCGGTGGCGCAAACCACGc                                                                                                                             <  1:245823/206‑1 (MQ=255)                                                                                                                                                                                                                 aCATTTTTTTAACACTTTTCACCTCAAAAAAGAGTGGCAAAGGACTTGAGAAGGAGCCTCAAATCCCTTCGCCGGCGTTATCCGGATCAGGTTCGACGGGTATTTTCTCAGCGCACGCGTACGCGTGGCACCCCGTTGAGAACTGCGTTAGTGTAGTGATTTTGTTATCAACCAGCAATCATGGATCCGGTGGCGCAAACCACGCTGATTTAAAATCGAACCAGCCGAGGGTATTCATGCGCAGGCCGCGCATACTGCGTTGCCCCTGAATGa                                                         <  1:194525/273‑1 (MQ=255)                                                                                                                                                                                                                   aTTTTTTTAACACTTTGCACCTCAAAAAAGAGTGGCAAAGGACTTGAGAAGGAGCCTCAAATCCCTTCGCCGGCGTTATCCGGATCAGGTTCGACGGGTATTTTCTCAGCGCACGCGTACGCGTGGCACCCCGTTGAGAACGGCGTTAGTGTAGTGAttt                                                                                                                                                                        >  2:191870/1‑160 (MQ=255)                                                                                                                                                                                                                       ttttAACACTTTGCACCTCAAAAAAGAGTGGCAAAGGACTTGAGAAGGAGCCTCAAATCCCTTCGCCGGCGTTATCCGGATCAGGTTCGACGGGTATTTTCTCAGCGCACGCGTACGCGTGGCACCCCGTTGAGAACGGCGTTAGTGTAGTGATTTTGtt                                                                                                                                                                    <  1:191873/160‑1 (MQ=255)                                                                                                                                                                                                                          tAACACTTTGCACCTCAAAAAAGAGTGGCAAAGGACTTGAGAAGGAGCCTCAAACCCCTTCGCCGGCGTTATCCGGATCNGGTTCGACNGGTATTTTCTCATCGCACGCGTACGCGTGGCACCCCGTTGAGAACGGCGTTAGTGTAGTGATTTTGTTATCAACCAGCAATCATGGATCCGGTGGCGCAAACCACGCTGATTTAAAATCGAACCAGCCGAGGGTATTCATGCGCAGGCAGCGCATATTGCGTTGCCCCTGAATGATCAGCCAg                                                 <  1:465026/272‑1 (MQ=255)                                                                                                                                                                                                                            acacTTTGCACCTCAAAAAAGAGTGGCAAAGGACTTGAGAAGGAGCCTCAAATCCCTTCGCCGGCGTTATCCGGATCAGGTTCGACGGGTATTTTCTCAGCGCACGCGTACGCGTGGCACCCCGTTGAGAACGGCGTTAGTGTAGTGATTTTGTTATCAACCAGCAATCATGGATCCGGTGGCGCAAACCACGCTGATTTAAAATCGAACCAGCCGAGGGTATTCATGCGCAGGCCGCGCATACTGCGTTGCCCCTGAATGATCAGCCAgtggt                                             <  1:375168/274‑1 (MQ=255)                                                                                                                                                                                                                               cTTTGCACCTCAAAAAAGAGTGGCAAAGGACTTGAGAAGGAGCCTCAAATCCCTTCGCCGGCGTTATCCGGATCAGGTTCGACGGGTATTTTCTCAGCGCACGCGTACGCGTGGCACCCCGTTGAGAACGGCGTTAGTGTAGTGATTTTGTTATCAACCAGCAATCATGGa                                                                                                                                                 >  1:44500/1‑171 (MQ=255)                                                                                                                                                                                                                               cTTTGCACCTCAAAAAAGAGTGGCAAAGGACTTGAGAAGGAGCCTCAAATCCCTTCGCCGGCGTTATCCGGATCAGGTTCGACGGGTATTTTCTCAGCGCACGCGTACGCGTGGCACCCCGTTGAGAACGGCGTTAGTGTAGTGATTTTGTTATCAACCAGCAATCATGGATCCGGTGGCGCAAACCACGCTGATTTAAAATc                                                                                                                 >  1:70973/1‑203 (MQ=255)                                                                                                                                                                                                                                  tGCACCTCAAAAAAGAGTGGCAAAGGACTTGAGAAGGAGCCTCAAATCcct                                                                                                                                                                                                                                                                      <  2:185511‑M2/51‑4 (MQ=255)                                                                                                                                                                                                                                   gCACTTCAAAAAAGATTGGAAAAGGACTTGAGAAGGAGCCTCAAATCCCTTCGCCGGCGTTATCCGGATCAGTTTCGACGGGTATTTTCTCAGCGCACGCGTACGCGTGGCACGCCGTTGAGAACGGCGTTAGTGTAGTGATTTTGTTATCAACCAGCAATCATGGATCCGGTGGCGCAAACCACGCTGATTTAAAATCGAACCAGCCGAGGGTATTCATGCGCAGGCCGCGCATACTGCGTTGCCCCTGAATGATCAGCCAgcaaagcgatggt                                     <  1:256181/275‑13 (MQ=255)                                                                                                                                                                                                                                   gCACCTCAAAAAAGAGTGGCAAAGGACTTGAGAAGGAGCCTCAAATCCCTTCGCCGGCGTTATCCGGATCAGGTTCGACGGGTATTTTCTCAGCGCACGCGTACGCGTGGCACCCCGTTGAGAACGGCGTTAGTGTAGTGATTTTGTTATCAACCAGCAATCATGGATCCg                                                                                                                                             <  2:44500/171‑1 (MQ=255)                                                                                                                                                                                                                                   gCACCTCAAAAAAGAGTGGCAAAGGACTTGAGAAGGAGCCTCAAATCCCTTCGCCGGCGTTATCCGGATCAGGTTCGACGGGTATTTTCTCAGCGCACGCGTACGCGTGGCACCCCGTTGAGAACGGCGTTAGTGTAGTGATTTTGTTATCAACCAGCAATCATGGATCCGGTGGCGCAAACCACGCTGATTTAAAATCGAAc                                                                                                             <  2:70972/203‑1 (MQ=255)                                                                                                                                                                                                                                      ccTCAAAAAAGAGTGGCAAAGGACTTGAGAAGGAGCCTCAAATCccttcgc                                                                                                                                                                                                                                                                  >  1:185514‑M2/1‑44 (MQ=255)                                                                                                                                                                                                                                          aaaaaaGAGTGGCAAAGGACTTGAGAAGGAGCCTCAAATCCCTTCGCCGGCGTTATCCGGATCAGGTTCGACGGGTATTTTCTCAGCGCACGCGTACGCGTGGCACCCCGTTg                                                                                                                                                                                                >  1:433838/1‑113 (MQ=255)                                                                                                                                                                                                                                              aaGAGTGGCAAAGGACTTGAGAAGGAGCCTCAAATCCCTTCGCCGGCGTTATCCGGATCAGGTTCGACGGGTATTTTCTCAGCGCACGCGTACGCGTGGCACCCCGTTGAGaa                                                                                                                                                                                            <  2:433831/113‑1 (MQ=255)                                                                                                                                                                                                                                                   tGGCAAAGGACTTGAGAAGGAGCCTCAAATCCCTTCGCCGGCGTTATCCGGATCAGGTTCGACGGGTATTTTCTCAGCGCACGCGTACGCGTGGCACCCCGTTg                                                                                                                                                                                                >  1:23127/1‑104 (MQ=255)                                                                                                                                                                                                                                                       aaaGGACTTGAGAAGGAGCCTCAAATCCCTTCGCCGGCGTTATCCGGATCAGGTTCGACGGGTATTTTCTCAGCGCACGCGTACGCGTGGCACCCCGTTGAGaa                                                                                                                                                                                            <  2:23127/104‑1 (MQ=255)                                                                                                                                                                                                                                                             cTTGAGAAGGAGCCTCAAATCCCTTCGCCGGCGTTATCCGGATCAGGTTCGACGGGGATTTTCTCAGCGCACGCGTACGCGTGGAACCCCGTTGAGAACGGCGTTAGTGTAGTGATTTTGTTATCAACCAGCAATCATGGATCCGGTGGCGCAAACCACGCTGATTTAAAATCGAACCAGCCGAGGGTATTCATGCGCAGGCCGCGCATACTGCGTTGCCCCTGAATGATCAGCCAGTGGTGCAATAATGGCACCATCGCTTTGCTGGCGACCAg           <  1:78827/275‑1 (MQ=255)                                                                                                                                                                                                                                                                   aaGGAGCCTCAAATCccttcgccgccgactgggggcctggtccggtggttaaaaaagcctttgaagccgactgta                                                                                                                                                                                                             <  1:433688‑M2/75‑61 (MQ=255)                                                                                                                                                                                                                                                                     ggAGCCTCAAATCccttcgccgccgactgggggcctggtccggtggttaaaaaagcctttgaagccgactgtaattgcgaactgaaactggtggcgctggaagatggcgtttcgcttctcaaccgtctacggatggaagg                                                                                                                                          <  1:41679‑M2/140‑128 (MQ=255)                                                                                                                                                                                                                                                                     ggAGCCTCAAATCccttcgccgccgactgggggcctggtccggtggttaaaaaagcctttgaagccgactgta                                                                                                                                                                                                             <  1:280872‑M2/73‑61 (MQ=255)                                                                                                                                                                                                                                                                     ggAGCCTCAAATCccatcgccgccgactgggggcctggtccggtggttaaaaaagcctttgaagccgactgtaattgcgaactgaaactggtggcgctggaagatggcgtttcgcttctcaaccgtctacggatggaaggc                                                                                                                                         <  2:38840‑M2/141‑129 (MQ=255)                                                                                                                                                                                                                                                                     ggAGCCTCAAATCCCTTCGCCGGCGTTATCCGGATCAGGTTCGACGGGTATTTTCTCAGCGCACGCGTACGCGTGGCACCCCGTTGAGAACGGCGTTAGTGTAGTGATTTTGTTATCAACCAGCAATCATGGATCCGGTGGCGCAAACCACGCTGATTTACAATCGAACCAGCCGAGGGTATTCATGCGCAGGCCGCGCATACTTCGTTGCCCCTAAGAGATCCGCCAGTGGTGCCACATTGGCACCATCCCCTTGCTTGCACCCATTTGNTggn   >  2:1796/1‑274 (MQ=255)                                                                                                                                                                                                                                                                     ggAGCCTCAAATCACTTCGCCGGCGTTATCCGGATCAGGTTCGACGGGTATTTTCTCAGCGCACGCGTACGCGTGGCACCCCGTTGAGAACGGCGTGAGTGTAGTGATTTTGTTATCAACCAGCAATCGTGGATCCGGTGGCGCAAACCACGCTGATGTAAAATCGAACCAGCCGCGGGTATTCATGCGCAGGCAGCGCATACTGCGTTGCCCCTGAATGATAAGCCAGTGGTGCAATAATGCCACCATCGCTTTGCTAGCGACCAGTTGCTgac   >  1:247088/1‑273 (MQ=255)                                                                                                                                                                                                                                                                      gAGCCTCAAATCCCTTCGCCGGCGTTATACGGATCAGGTTCGACTGGTATTTTCTCAGCGCACGCGTACGCGTGGCACCCCGTTGAGAACGGCGTTAGTGTAGTGATTTTGTTATCAACCAGCAATCATGGATCCGGTGGCGCAAACCACGCTGATTTAAAATCGAACCAGCCGAGGGTATTCNTGCGCAGGCCGCGCATACTGCGTTGCCCCTGAATGATCAGCCAGTGGTGCAATAATGGCACCATCGCTTTGCTGGCGACCAGTTGCTGGCa  >  1:529170/1‑275 (MQ=255)                                                                                                                                                                                                                                                                       aGCCTCAAATCccttcgccgccgactgggggcctggtccggtggttaaaaaagcctttgaagccgactgtaattg                                                                                                                                                                                                         >  2:433681‑M2/1‑11 (MQ=255)                                                                                                                                                                                                                                                                        gCCTCAAATCCCTTCGCCGGCGTTATCCGGATCAGGTTCGACGGGTATTTTCTCAGCGCACGCGTACGCGTGGCACCCCGTTGAGAACGGCGTTAGTGTAGTGATTTTGTTATCAACCAGCAATCATGGATCCGGTGGCGCAAACCACGCTGATTTAAAATCGAACCAGCCGAGGGTATTCATgcgc                                                                                        >  2:598923/1‑187 (MQ=255)                                                                                                                                                                                                                                                                         ccTCAAATCccttcgccgccgactgggggcctggtccggtggttaaaaaagcctttgaagccgactgtaattg                                                                                                                                                                                                         >  2:280867‑M2/1‑9 (MQ=255)                                                                                                                                                                                                                                                                         ccTCAAATCccatcgccgccgactgggggcctggtccggtggttaaaaaagcctttgaagccgactgtaattgcgaactgaaactggtggcgctggaagatggcgtttcgcttctcaaccgtctacggatggaaggcaaaa                                                                                                                                     >  1:38840‑M2/1‑9 (MQ=255)                                                                                                                                                                                                                                                                            cAAATCCCTTCGCCGGCGTTATCCGGATCAGGTTCGACGGGTATTTTCTCAGCGCACGCGTACGCGTGGCACCCCGTTGAGAACGGCGTTAGTGTAGTGATTTTGTTATCAACCAGCAATCATGGATCCGGTGGCGCAAACCACGCTGATTTAAAATCGAACCAGCCGAGGGTATTCATGCGCAGGc                                                                                    <  1:598932/187‑1 (MQ=255)                                                                                                                                                                                                                                                                                 |                                                                                                                                                                                                                                                                        TACTGTTTTTGCCTTCCATCCGTAGACGGTTGAGAAGCGAAACGCCATCTTCCAGCGCCACCAGTTTCAGTTCGCAATTACAGTCGGCTTCAAAGGCTTTTTTAACCACCGGACCAGGCCCCCAGTCGGCGGCGAAGGAATCGTAGGTATAAACAGTCAGAACGGGTTTAGCGAAAACGGGCGCTGTGCACAGCAACAGCAGGGGCAGACATTTTTTTAACACTTTGCACCTCAAAAAAGAGTGGCAAAGGACTTGAGAAGGAGCCTCAAATCCCTTCGCCGGCGTTATCCGGATCAGGTTCGACGGGTATTTTCTCAGCGCACGCGTACGCGTGGCACCCCGTTGAGAACGGCGTTAGTGTAGTGATTTTGTTATCAACCAGCAATCATGGATCCGGTGGCGCAAACCACGCTGATTTAAAATCGAACCAGCCGAGGGTATTCATGCGCAGGCCGCGCATACTGCGTTGCCCCTGAATGATCAGCCAGTGGTGCAATAATGGCACCATCGCTTTGCTGGCGACCAGTTGCTGGCA  >  CP009273/71745‑72280

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.