New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP009273	= 77191	63 (1.640)	4 (0.110)	4/300	NT	6.2%	coding (161/1401 nt)	leuC	3‑isopropylmalate dehydratase large subunit
	?	CP009273	= 77375	61 (1.660)					coding (1071/1092 nt)	leuB	3‑isopropylmalate dehydrogenase, NAD(+)‑dependent

CCGATACCAAAGGCCAGTGCGCCAAACGCGCCGTGGGTGGCGGTATGCGAGTCGCCGCAGACAATGGTCATCCCCGGCAAGGTGACGCCCTGTTCCGGCCCCATTACGTGGACGATCCCCTGATACGGGTGATTCAGGTCATACAGTTCGACGCCAAATTCTTTGCAGTTTTTGATCAGTTCCTGCATCTGGATACGCGCCATTTCACCGCAGGCATTAATGTCTTTGGTCTGGGTAGAGACGTTGTGATCCATGGTAGCGAAGGTTTTGCCCGGCTGACGTACCGGGCGACCGTGGGCGCGCAGACCATCGAACGCCTGCGGTGAGGTCACTTCATGCACCAGGTGGCGGTCGATATATAACAGTGGGGTTTCGTTTTCGGCTTCGTACACAACGTGAGCGTCGAACAATTTTTCGTATAACGTCTTAGCCATGATTACACCCCTTCTGCTACATAGCGGGCAATGATATCGCCCATTTCATCGGTACTAACGGCGGCAGCGCCACGGGCTAAATCCCCGGTGCGAA  >  CP009273/76918‑77445                                                                                                                                                                                                                                                                                  |                                                                                                                                                                                                                                                               ccGATACCAAAGGCCAGTGCGCCAAACGCGCCGTGGGTGGCGGTATGCGAGTCGCCGCAGACAATGGTCATCCCCGGCAAGGTGACGCCCTGTTCCGGCCCCATTACGTGGACGATCCCCTGATACGGGTGATTCAGGTCATACAGATCGACGCCAAANTCTTTGCAGTTTTTGATCAGTTCCTGCATCTGGATACGCGCCATTTCACCGCAGGCATTAATGTCTTTGGTCTGGGTAGAGACGTTGTGATCCATGGTAGCGAAGGTTTTGCCCgg                                                                                                                                                                                                                                                               >  1:667907/1‑275 (MQ=255)                 gTGCGCCAAACGCGCCGTGGGTGGCGGTATGCGAGTCGCCGCAGACAATGGTCATCCCCGGCAAGGTGACGCCCTGTTCCGGCCCCATTACGTGGACGATCCCCTGATACGGGTGATTCAGGTCATACAGTTCGACGCCAAATTCTTTGCAGTTTTTGATCAGTTCCTGCATCTGGATACGCGCCATTTCACCGCAGGCATTAATGTCTTTGGTCTGGGTAGAGACGTTGTGATCCATGGTAGCGAAGGTTTTGCCCGGCTGACGTACCGGGCGa                                                                                                                                                                                                                                               >  1:326412/1‑275 (MQ=255)                  tagcccgtggcgctgccgccgttagtaccgatgaaatgggcgatatcattgcccgctatgtagcagaaggggtgtaatcatggctaagacgttatacgaaaaattgttcgacgctcacgttgtgtacgaagccgaaaacgaaaccccactgttatatatcgaccgccacctggtgcatgaagtgaccTCACCGCAGGCATTAATGTCTTTGGTCTGGGTAGAGACGTTGTGATCCATGGTAGCGAAGGTTTTGCCCGGCTGACGTACCGGGCGAc                                                                                                                                                                                                                                              >  1:262260‑M1/188‑275 (MQ=255)                  tGCGCCAAACGCGCCGTGGGTGGCGGTATGCGAGTCGCCGCAGACAATGGTCATCCCCGGCAAGGTGACGCCCTGTTCCGGCCCCATTACGTGGACGATCCCCTGATACGGGTGATTCAGGTCATACAGTTCGACGCCAAATTCTTTGCAGTTTTTGATCAGTTCCTGCATCTGGATACGCGCCATTTCACCGCAGGCATTAATGTCTTTGGTCTGGGTAGAGACGTTGTGATCCATGGTAGCGAAGGTTTTGCCCGGCTGACGTACCGGGCGa                                                                                                                                                                                                                                               >  2:285255/1‑274 (MQ=255)                            gcgcCGTGGGTGGCGGTATGCGAGTCGCCGCAGACAATGGTCATCCCCGGCAAGGTGACGCCCTGTTCCGGCCCCATTACGTGGACGATCCCCTGATACGGGTGATTCAGGTCATACAGTTCGACGCCAAATTCTTTGCAGTTTTTGATCAGTTCCTGCATCTGGATACGCGCCATTTCACCGCAGGCATTAATGTCTTTGGTCTGGGTAGAGACGTTGTGATCCATGGTAGCGAAGGTTTTGCCCGGCTGACGTACCGGGCGACCGTGGgcgc                                                                                                                                                                                                                                     >  1:410963/1‑274 (MQ=255)                              gcCGGGTGTTGCGGTTGGCGAGTCGCCGCAGAACATGTTCATCCCCGGCAAGGTGACGCCCTGTTCCGGCCCCATTTCGTGTACGATCCCCNGATACGGGTGATTCAGGTCATACAGTTCGACGCCAAATTCTTTGCAGTTTTTGATCATTTCCTGCATCTGGATACGCGCCATTTCACCGCAGGCAATAATGTCTTTGGTCTGGGTAGAGACGTTGTGATCCATGGTAGCGAAGGTTTTGCCCGCCTGAGCTACCGGGCGACCGTGGGCGCGCa                                                                                                                                                                                                                                  <  1:486358/275‑1 (MQ=255)                                                   gTCGCCGCAGACAATGGTCATCCCCGGCAAGGTGACGCCCTGTTCCGGCCCCATTATGTGGACGATCCCCTGATACGGGTGATTCAGGTCATACAGTTCGACGCCAAATTCTTTGCAGTTTTTGATCAGTTCCTGCATCTGGATACGCGCCATTTCACCGCAGGCATTAATGTCTTTGGTCTGGGTAGAGACGTTGTGATCCATGGTAGCGAAGGTTTTGCCCGGCTGACGTACCGGGGGACCGGGGGCGCGTAGAGCATTGCACCCCTGGGGt                                                                                                                                                                                                              >  2:133593/1‑274 (MQ=255)                                                      gccgcAGACAATGGTCATCCCCGGCAAGATGACGCCCTGTTCCGGCCCCATTACGTGGACGATCCCCTGATACGGGTGATTCAGGTCATACAGTTCGACGCCACATTCTTTGCAGTTTTTGATCAGTTCCTGCATCTGGATACGCGCCATTTCACCGCAGGCATAAATGTCTTTGGTCTGGGTNGAGACGTTGTGATCCATGGTAGCGAAGGTTTTGCCCGGCTGACGTACCGGGCGACCGTGGGCGCGCAGACCATCGAACGCCTGCGGTGAg                                                                                                                                                                                                           >  1:531211/1‑274 (MQ=255)                                                                       tCCCCGGCAAGGTGACGCCCTGTTCCGGCCCCATTACGTGGACGATCCCCTGATACGGGTGATTCAGGTCATACAGTTCGACGCCAAATTCTTTGCAGTTTTTGATCAGTTCCTGCATCTGGATACGCGCCATTTCACCGCAGGCATTAATGTCTTTGGTCTGGGTAGAGACGTTGTGATCCATGGTAGCGAAGGTTTTGCCCGGCTGACGTACCGGGCGACCGTGGGCGCGCAGACCATCGAACGCCTGCGGTGa                                                                                                                                                                                                            >  1:626794/1‑256 (MQ=255)                                                                           cGGCAAGGTGACGCCCTGTTCCGGCCCCATTACGTGGACGATCCCCTGATACGGGTGATTCAGGTCATACAGTTCGACGCCAAATTCTTTGCAGTTTTTGATCAGTTCCTGCATCTGGATACGCGCCATTTCACCGCAGGCATTAATGTCTTTGGTCTGGGTAGAGACGTTGTGATCCATGGTAGCGAAGGTTTTGCCCGGCt                                                                                                                                                                                                                                                             <  1:633806/203‑1 (MQ=255)                                                                           cGGCAAGGTGACGCCCTGTTCCGGCCCCATTACGTGGACGATCCCCTGATACGGGTGATTCAGGTCATACAGTTCGACGCCAAATTCTTTGCAGTTTTTGATCAGTTCCTGCATCTGGATACGCGCCATTTCACCGCAGGCATTAATGTCTTTGGTCTGGGTAGAGACGTTGTGATCCATGGTAGCGAAGGTTTTGCCCGGCTGACGTACCGGGCGACCGTGGGCGCGCAGACCATCGAACGCCTGCGGTGAGGTc                                                                                                                                                                                                        <  2:626785/256‑1 (MQ=255)                                                                             gCAAGGTGACGCCCTGTTCCGGCCCCATTACGTGGACGATCCCCTGATACGGGTGATTCAGGTCATACAGTTCGACGCCAAATTCTTTGCAGTTTTTGATCAGTTCCTGCATCTGGATACGCGCCATTTCACCGCAGGCATTAATGTCTTTGGTCTGGGTAGAGACGTTGTGATCCATGGTAGCGAAGGTTTTGCCCGGCTGACGTACCGGGCGACCGTGGGCGCGCAGACCATCGAACGCCTGCGGTGAGGTCACTTCATGCACCAGGTGGCgg                                                                                                                                                                                   >  1:82194/1‑275 (MQ=255)                                                                              cgtggagtcGCCCTGTTCCGGCCCCAGTACGTGGACGATCCCCTGATACTGGTGATTCAGGTCATACAGTTCGACGCCAAATTCTTTGCAGTTTTTGATCAGTTCCTGCATCTGGATACGCGCCATTTCACCGCAGGCATTAATGTCTTTGGTCTGGGTAGAGACGTTGTGATCCATGGTAGCGAAGGTTTTGCCCGGCTGACGTACCGGGCGACCGTGGGCGCGCAGACCATCGAACGCCTGCGGTGAGGTCACTTCATGCACCAGGTGGCGGt                                                                                                                                                                                  <  2:83377/267‑1 (MQ=255)                                                                              catggggacgacCTGTTCCGGCCCCATTACGTGGACGTTCCCCTGTTACGGTTGATTCATGTCATACTGTTCGACGCCAAATTCTTTGCAGTTTTTGATCAGTTCCTGCATCTGGATACGCGCCATTTCACCGCAGGCATTAATGTCTTTGGTCTGGGTAGAGACGTTGTGAGCCATGGTAGCGAAGGTTTTGCCCGGCTGACGTACCGGGCGACCGTGGGCGCGCAGACCATCGAACGCCTGCGGTGAGGTCACTTCATGCACCAGGTGGCGGt                                                                                                                                                                                  <  2:667898/269‑1 (MQ=255)                                                                              cagggTGACGCCCTGTTCCTGCCCCATTACTTGGTCGTTCCCCTGATACGGGTGATTCAGGTCATACAGTTCGACGCCAAATTTTTTGCAGTTTGTGATCAATTCCTGCATCTGGATACGCGCCATTTCACCGCAGGCATTGATGTCTTTGGTCTGGGTAGAGACGTTGTGATCCATGGTAGCGAAGGTTTTGCCCGGCTGACGTACCGGGCGACCGTGGGCGCGCAGACCATCGAACGCCTGCGGTGAGGTCACTTCATGCACCAGGTGGCGGt                                                                                                                                                                                  <  2:326406/272‑1 (MQ=255)                                                                              cagggTGACGCCCTGTTCCGGCCCCATTACGTTGACGGTCCCCTGATACGGGTGATTCAGGTCATACAGTTCGACGCCAAATTCTTTGCAGTTTTTGATCAGTTCCTGCATCTGGATACGCGCCATTTCACCGCAGGCATTAATGTCTTTGGTCTGGGTAGAGACGTTGTGATCCATGGTAGCGAAGGTTTTGCCCGGCTGACGTACCGGGCGACCGTGGGCGCGCAGACCATCGAACGCCTGCGGTGAGGTCACTTCATGCACCAGGTGGCGGt                                                                                                                                                                                  <  1:155266/272‑1 (MQ=255)                                                                                      cGCCCTGTTCCGGCCCCATTATGTGGACGATCCCCTGATACGGGTGATTCAGGTCATACAGTTCGACGCCAAATTCTTTGCAGTTTTTGATCAGTTCCTGCATCTGGATACGCGCCATTTCACCGCAGGCATTAATGTCTTTGGTCTGGGTAGAGACGTTGTGATCCATGGTAGCGAAGGTTTTGCCCGGCTGACGTACCGGGCGACCGTGGGCGCGCAGACCATCGAACGCCTGCGGTGAGGTCACTTCATGCACCAGGTGGCGGTCGatatat                                                                                                                                                                          <  1:133594/275‑1 (MQ=255)                                                                                       gcgcgtttCCGGCCCCAGTACGTGGACGATCCCCTGATACGGGTGATTCAGGTCATACAGTTCGACGCCAAATTCTTTGCAGTTTTTGATAAGTTCCTGCATCTGGATACGCGCCATTTCACCGCAGGCATTAATGTCTTTGGTCTGGGTAGAGACGTTGTGATCCATGGTAGCGAAGGTTTTGCCCGGCTGACGTACCGGGCGACCGTGGGCGCGCAGACCATCGAACGCCTGCGGTGAGGTCACTTCATGCACCAGGTGGCGGTCGatatat                                                                                                                                                                          <  2:82193/268‑1 (MQ=255)                                                                                                  gCCCCATTACGTGGACGATCCCCTGATACGGGTGATTCAGGTCATACAGTTCGACGCCAAATTCTTTGCAGTTTTTGATCAGTTCCTGCATCTGGATACGCGCCATTTCACCGCAGGCATTAATGTCTTTGGTCTGGGTAGAGACGTTGTGATCCATGGTAGCGAAGGTTTTGCTCGGCTGACNTACCGGGCGACCGTGGGCGCGCAGACCATCGAACGCCTGCGGTGAGGTCACTTCATGCACCAGGTGGCGGTCGATATATAAcctgtccct                                                                                                                                                               >  1:564339/1‑266 (MQ=255)                                                                                                  gCCCCATTACATGGACGATCCCCTGATACGGGTGATTCAGGTCATACAGTTCGACGCCAAATTCTTTGCAGTTTTTGATCAGTTCCTGCATCTGGATACGCGCCATTTCACCGCAGGCATTAATGTCTTTGGTCTGGGTAGAGACGTTGTGATCCATGGTAGCGAAGGTTTTGCCCGGCTGACGTACCGGGCGACTGTGGGCGCGCAGACCATCGAACGCCTGCGGTGAGGTCACTTCATGCACCAGGTGGCGGTCGATATATAACAGTGGGGtt                                                                                                                                                              >  1:705055/1‑275 (MQ=255)                                                                                                             tGGACGATCCCCTGATACGGGTGATTCAGGTCATACAGTTCGACGCCAAATTCTTTGCAGTTTTTGATCAGTTCCTGCATCTGGATACGCGCCATTTCACCGCAGGCATTAATGTCTTTGGTCTGGGTAGAGACGTTGTGATCCATGGTAGCGAAGGTTTTGCCCGGCTGACGTACCTGGCGACCGTGGGCGCGCAGACCATCGAACGCCTGCGGTGAGGTCACTTCATGCACCAGGTgg                                                                                                                                                                                      >  1:404970/1‑240 (MQ=255)                                                                                                                       aattgttcgacgctcacgttgtgtacgaagccgaaaacgaaaccccactgttatatatcgaccgccacctggtgcatgaagtgaccTCACCGCAGGCATTAATGTCTTTGGTCTGGGTAGAGACGTTGTGATCCATGGTAGCGAAGGTTTTGCCCGGCTGa                                                                                                                                                                                                                                                           <  2:367599‑M1/75‑1 (MQ=255)                                                                                                                           gttcgacgctcacgttgtgtacgaagccgaaaacgaaaccccactgttatatatcgaccgccacctggtgcatgaagtgaccTCACCGCAGGCATTAATGTCTTTGGTCTGGGTAGAGACGTTGTGATCCATGGTAGCGAAGGTTTTGCCCGGCTGACGTa                                                                                                                                                                                                                                                       >  1:367605‑M1/83‑161 (MQ=255)                                                                                                                              cGGGTGATTCAGGTCATACAGTTCGACGCCAAATTCTTTGCAGTTTTTGATCAGTTCCTGCATCTGGATACGCGCCATTTCACCGCAGGCATTAATGTCTTTGGTCTGGGTAGAGACGTTGTGATCCATGGTAGCGAAGGTTTTGCCCGGCTGACGTACCGGGCGACCGTGTGCGCGCAGACCATCGAACGCCTGCGGTGAGGTCACtt                                                                                                                                                                                                    <  1:585863/209‑1 (MQ=255)                                                                                                                                    aTTCAGGTCATTCAGTTCGACGCCTAATTCTTTGCAGTTTTTGATCAGGTCCTGCATCTGGATACGCGCCATTTCACCGCTGGCATTAATGTCTTTGGTCGTGGTAGAGACGTTGTTCTCCATGGTAGCGAAGGTTTTGCCCGGCTGACGTACCGGGCGACCGTGGGCGCGCAGACCATCGAACGCCTGCGGTGAGGTCACTTCATGCACCAGTTGGCGGTCGATATATAACAGTGGGGTTTCGTTTTCGGCTTCGTACACAACGTGAGCGTCGa                                                                                                                            <  1:267062/275‑1 (MQ=255)                                                                                                                                                   ttCGACGCCAAAGTCTTTGCAGTTTTTGATCAGTTCCTGCATCTGGATACGCGCCATTTCACCGCAGGCATTAATGTCTTTGGTCTGGGTAGAGACGTTGTGATCCATGGTAGCGAAGGTTTTGCACGGCTGACGTACCGGGCGACCGTGGGCGCGCAGACCATCGAACGCCTGCGGTGAGGTCACTTCATGCACCAGGTgg                                                                                                                                                                                      >  2:605174/1‑202 (MQ=255)                                                                                                                                                       aCGCCAAATTCTTTGCAGTTTTTGATCAGTTCCTGCATCTGGATACGCGCCATTTCACCGCAGGCATTAATGTCTTTGGTCTGGGTAGAGACGTTGTGATCCATGGTAGCGAAGGTTTTGCCCGGCTGACGTACCGGGCGACCGTGGGCGCGCAGACCATCGAACGCCTGCGGTGAGGTCACTTCATGCACCAGGTGGCGGt                                                                                                                                                                                  <  1:605183/202‑1 (MQ=255)                                                                                                                                                        cGCCAAATTCTTTGCAGTTTTTGATCAGTTCCTGCATCTGGATACGCGCCATTTCACCGCAGGCATTAATGTCTTTGGTCTGGGTAGAGACGTTGTGATCCATGGTAGCGAAGGTTTTGCCCGGCTGACGTACCGGGCGACCGTGGGCGCGCAGACCATCGAACGCCTGCGGTGAGGTCACTTCATGCACCAGGTGGCGGTCGATATATAACAGTGGGGTTTCGTTTTCGGCTTCGTACACAACGTGAGCGTCGAACAATTTTTCGTATAACGTc                                                                                                        >  1:277386/1‑275 (MQ=255)                                                                                                                                                        cGCCAAATTCTTTGCAGCTTTTGATCAGTTCGTGCATCTGGATACGCGCCATTTCACCGCAGGCATTAATGTCTTTGGTCTGGGTAGAGACGTCGTGATCCATGGTAGCGAAGGTTTTGCCCGGCTGACGTACCGGGCGATCGTTGGCGCGCAGACCATCGAACGCCTGCGGTGAGGTCACTTCATGCACCCGGTGGCGGTCGATATATAACAATGGGGGTACTTTTTCGGCTTCGTACACCACGAGAGCGTGGAACAAttttttggatccattc                                                                                                        >  2:598427/1‑264 (MQ=255)                                                                                                                                                           cAAATTCTTTGCAGTTTTTGATCAGTTCCTGCATCTGGATACGCGCCATTTCACCGCAGGCATTAATGTCTTTGGTCTGGGTAGAGACGTTGTGATCCATGGTAGCGAAGGTTTTGCCCGGCTGACGTACCGGGCGACCGTGGGCGCGCAGACCATCGAACGCCTGCGGTGAGGTCACTTCATGCACCAGGTgg                                                                                                                                                                                      >  1:585521/1‑194 (MQ=255)                                                                                                                                                              tttttttgtggTTTTTGTTTAGTTCCTGCATCTGGATACGGGCCATTTCACCGGAGGCATTAATGTCTTTGGTCTGGGTAGAGACGTTGTGATCCATCGTAGCGAAGGTTTTGCCCGGCTGACGTACCGGGCGACCGTGGGCGCGCAGACCATCGAACGCCTGCGGTGAGGTCACTTCATGCACCAGGTGGCGGTCGATATATAACAGTGGGGTTTCGTTTTCGGCTTCGTACACAACGTGAGCGTCGAACAATTTTTCGTATAACGTCTTAGcc                                                                                                  <  1:382189/265‑1 (MQ=255)                                                                                                                                                               ttCTTTGCAGTTTTTGATCAGTTCCTGCATCTGGATACGCGCCATTTCACCGCAGGCATTAATGTCTTTGGTCTGGGTAGAGACGTTGTGATCCATGGTAGCGAAGGTTTTGCCCGGCTGACGTACCGGGCGACCGTGGGCGCGCAGACCATCGAACGCCTGCGGTGAGGTCACTTCATGCACCAGGTGGCGGt                                                                                                                                                                                  <  2:585512/194‑1 (MQ=255)                                                                                                                                                                       atggtttgttgtcttCATGAATTNGGATACGCGCCATTTCACCGCAGCTATTTATGTCTTTGGTCTGGGTAGAGGCGTTGTGATCCATGGTAGCGAAGGTTTTGCCCGGCTGACGTACCGGGCGACCGTGGGCGCGCAGACCATCGAACGCCTGCGGTGAGGTCACTTCATGCACCAGGTGGCGGTCGATATATAACAGTGGGGTTTCGTTTTCGGCTTCGTACACAACGTGAGCGTCGAACAATTTTTCGTATAACGTCTTAGCCATGATTac                                                                                          <  2:410956/261‑1 (MQ=255)                                                                                                                                                                           tttGATCAGTTCCTGCATCTGGATACGCGCCATTTCACCGCAGGCATTAATGTCTTTGGTCTGGGTAGAGACGTTGTGATCCATGGTAGCGAAGGTTTTGCCCGGCTGACGTACCGGGCGACCGTGGGCGCGCAGACCATCGAACGCCTGCGGTGAGGTCACTTCATGCACCAGGTGGCGGTCGATATATAACAGTGGGGTTTCGTTTTCGGCTTCGTACACAACGTGAGCGTCGAACAATTTTTCGTATAACGTCTTAGCCATGATTACAcccc                                                                                     <  1:285260/275‑1 (MQ=255)                                                                                                                                                                             tGATCTGTTCCTGCCTCTGGATACGCGCCATTTCACCGCAGGCAGTAATGTCTTTGGTCTGGGTAGAGCCGTTGTGATCCATGGTAGCGAAGGTGTTGCCCGGCTGACGTACCGGGCGACCGTGGGCGCGCAGACCATCGAACGCCTGCGGTGAGGTCACTTCATGCACCAGGTGGCGGTCGATATATAACAGTGGGGTTTCGTTTTCGGCTTCGTACACAACGTGAGCGTCGAACAATTTTTCGTATAACGTCTTAGCCATGATTACACCCCtt                                                                                   <  2:705045/275‑1 (MQ=255)                                                                                                                                                                                              tGGATACGCGCCATTTCACCGCAGGCATTAATGTCTTTGGTCTGGGTAGAGACGTTGTGATCCATGGTAGCGAAGGTTTTGCCCGGCTGACGTACCGGGCGACCGTGGGCGCGCAGCCCATCGAACGCCTTCGGTGATGTCACTCCATGCGACCGGTGGCGGTCGgtat                                                                                                                                                                            >  2:330956/1‑169 (MQ=255)                                                                                                                                                                                                  tANGCGCCATTTCACCGCAGGCATTAATGTCTTTGGTCTGGGTAGAGACGTTGTGATCCATGGTAGCGAAGGTTTTGCCCGGCTGGCGTACCGGGCGACCGTGGGCGCGCAGACCATCGAACGCCTGCGGTGAGGTCACTTCATGCACCAGGTGGCGGTCGTTATATAACCGTGGGGTTTCGtttt                                                                                                                                                       <  1:497406/186‑1 (MQ=255)                                                                                                                                                                                                  tACGCGCCATTTCACCGCAGGCATTAATGTCGTTGGTCTGGGTAGAGACGTTGTGATCCATGGTAGCGAAGGTTTTGCCCGGCTGACGTACCGGGCGACCGTGGGCGCGCAGACCATCGAACGCCTGCGGTGAGGTCACTTCATGCACCAGGTGGCGGTCGATATATaa                                                                                                                                                                        <  1:330962/169‑1 (MQ=255)                                                                                                                                                                                                      cgcCATTTCACCGCAGGCATTAATGTCTTTGGTATGGGTAGAGACGTTGTGATCCATGGTAGCGAAGGTTTTGCCCGGCTGACGTACCGGGCGACCGTGGGCGCGCAGGCCATCGAACGCCTGCGGTGAGGTCACTTCATGCACCAGGTGGCGGTCGATATATAACAGTGGGGTTTCGTTTTCGGCTTCGTACACAACGTGAGCGTCGAACAATTTTTCGTATAACGTCTTAACCATGATTACACCCCTTCTGCAACAAAACGGGCAATAATATc                                                          >  1:37713/1‑275 (MQ=255)                                                                                                                                                                                                          aTTTCACCGCAGGCATTAAAGTCTTTGGTCTGGGTAGAGACGTTGTGATCCATGGTAGCGAAGGTTTTGCCCGGCTGACGTACCGGGCGACCGTGGGCGCGCAGACCATCGAACGCCTGCGGTGAGGTCACTTCATGCACCAGGTGGCGGTCGATATATAACAGTGGGGTTTCGTTTTCGGCTTCGTACACAACGTGAGCGTCGAACAATTTTTCGTATAACGTCt                                                                                                       >  1:573825/1‑226 (MQ=255)                                                                                                                                                                                                               ACCGCAGGCATTAATGTCTTTGGTCTGGGTAGAGACGTTGTGATCCATGGTAGCGAAGGTTTTGCCCGGCTGACGTACCGGGCGACCGTGGGCGCGCAGACCATCGAACGCCTGCGGTGAGGTCACTTCATGCACCAGGTGGCGGTCGATATATAACAGTGGGGTTTCGTTTTCg                                                                                                                                                     <  1:379093‑M1/175‑1 (MQ=255)                                                                                                                                                                                                                   CAGGCATTAATGTCTTTGGTCTGGGTAGAGACGTTGTGATCCATGGTAGCGAAGGTTTTGCCCGGCTGACGTACCGGGCGACCGTGGGCGCGCAGACCATCGAACGCCTGCGGTGAGGTCACTTCATGCACCAGGTgg                                                                                                                                                                                      <  1:517816‑M1/138‑1 (MQ=255)                                                                                                                                                                                                                       CATTAATGTCTTTGGTCTGGGTAGAGACGTTGTGATCCATGGTAGCGAAGGTTTTGCCCGGCTGACGTACCGGGCGACCGTGGGCGCGCAGACCATCGAACGCCTGCGGTGAGGTCACTTCATGCACCAGGTGGCGGt                                                                                                                                                                                  >  2:517809‑M1/1‑138 (MQ=255)                                                                                                                                                                                                                                 tttGGTCTGGGTAGAGACGTTGTGATCCGTGGTAGCGAAGGTTTTGCCCGctatgtagcagaaggggtgtaatcatggctaagacgttatacgaaaaattgttcgacgctcacgttgtgtacgaagccgaaaacgaaaccccactgttatatatcgaccgccacctggtgcatgaagtgacctcacc                                                                                                                       >  1:530076‑M1/1‑50 (MQ=255)                                                                                                                                                                                                                                  ttGGTCTGGGTAGAGACGTTGTGATCCATGGTAGCGAAGGTTTTGCCCGctatgtagcagaaggggtgta                                                                                                                                                                                                                                           >  2:640385‑M1/1‑49 (MQ=255)                                                                                                                                                                                                                                     gTCTGGGTAGAGACGTTGTGATCCATGGTAGCGAAGGTTTTGCCCGctatgtagcagaaggggtgtaatcatggctaagacgttatacgaaaaattgttcgacgctcacgttgtgtacgaagccgaaaacgaaaccccactgttatatatcgaccgccacctggtgcatgaagtgacctcaccgcag                                                                                                                   <  2:530068‑M1/187‑142 (MQ=255)                                                                                                                                                                                                                                      tCTGGGTAGAGACGTTGTGATCCATGGTAGCGAAGGTTTTGCCCGctatgtagcagaaggggtgtaatca                                                                                                                                                                                                                                       <  1:640394‑M1/70‑26 (MQ=255)                                                                                                                                                                                                                                         gggTAGAGACGTTGTGATCCATGGTAGCGAAGGTTTTGCACGGCTGACGTACCGGGCGACCGTggg                                                                                                                                                                                                                                        >  1:603995/1‑66 (MQ=255)                                                                                                                                                                                                                                           agagatgcGTTATGATCCATGGTAGCAAAGTTGTTGCCCGCCTGACGGTCCCGGCGACCGTTGGTGCGCAGACTAGCTAACGCCTGCGGTGATGTCACTTCATGCTCCAGGTGGCGGTCGAGAGATAACAGTGGGGTTTCGTTTTCGGCTTCTTACACAACGTGAGCGTCGAACAATTTATCGTATAACGTATTAGCCATCATTACACCCCTTCTGCTACATTGCGGGCAATGATATCGCCCATTTCATCGGTACTAACGGCGGCAGCGCCACgg                     <  2:37713/268‑1 (MQ=255)                                                                                                                                                                                                                                             agagACGTTGTGATCCATGGTAGCGAAGGTTTTGCCCGGCTGACGTACCGGGCGACCGTGGgcgcg                                                                                                                                                                                                                                    <  2:603986/66‑1 (MQ=255)                                                                                                                                                                                                                                               agaCGTTGTGATCCATGGTAGCGAAGGTTTTGCCCGGCTGACGTACCGGGCGACCGTGGGCGCGCAGACCATCGAACGCCTGCGGTGAGGTCACTTCATGCACCAGGTgg                                                                                                                                                                                      >  1:321044/1‑110 (MQ=255)                                                                                                                                                                                                                                                   gTTGTGATCCATGGTAGCGAAGGTTTTGCCCGGCTGACGTACCGGGCGACCGTGGGCGCGCAGACCATCGAACGCCTGCGGTGAGGTCACTTCATGCACCAGGTGGCGGt                                                                                                                                                                                  <  2:321038/110‑1 (MQ=255)                                                                                                                                                                                                                                                    ttGTGATCCATGGTAGCGAAGGTTTTGCCCGGCTGACGTACCGGGCGACCGTGGGCGCGCAGACCATCGAACGc                                                                                                                                                                                                                     >  1:613854/1‑74 (MQ=255)                                                                                                                                                                                                                                                    ttGTGATCCATGGTAGCGAAGGTTTTGCCCGGCTGACGTACCGGGCGACCGTGGGCGCGCAGACCATCGAACGCCTGCGGTGAGGTCACTTCATGCACCAGGTgg                                                                                                                                                                                      >  1:356439/1‑105 (MQ=255)                                                                                                                                                                                                                                                       tgacacaggggaGNGAAGGTTTGGCACGGCGGCCGTACCGGTCAACCGTGGGCGCGCAGACCATCGAACGCCTGCTGGGAGGTCACTGCATGCACCAGGGGGCGGTCGATATATAACAGTTGGGTTTCGTTTTCGGCTTCGTACACAACGTGAGCGTCGAACAATTTTTCGTATAACGTCTTAGCCATGATTACACCCCTTCTGCTACATAGCGGGCAATGATATCGCCCATTTCATCGGTACTAACGGCGGCAGCGCCACGGGCTAAATcccc          <  2:531203/263‑1 (MQ=255)                                                                                                                                                                                                                                                        gATCCATGGTAGCGAAGGTTTTGCCCGGCTGACGTACCGGGCGACCGTGGGCGCGCAGACCATCGAACGCCTGc                                                                                                                                                                                                                 <  2:613845/74‑1 (MQ=255)                                                                                                                                                                                                                                                        gATCCATGGTAGCGAAGGTTTTGCCCGGCTGACGTACCGGGCGACCGTGGGCGCGCAGACCATCGAACGCCTGCGGTGAGGTCACTTCATGCACCAGGTGGCGGt                                                                                                                                                                                  <  2:356433/105‑1 (MQ=255)                                                                                                                                                                                                                                                           ccATGGTAGCGAAGGTTTTGCCCGGCTGACGTACCGGGCGACCGTGGGCGCGCAGACCATCGAACGCCTGCGGTGAGGTCACTTCATGCACCAGGTGGCGGTCGATATATAACAGTGGGGTTTCGTTTTCGGCTTCGTACACAACGTGAGCGTCGAACAATTTTTCGTATAACGTCTTAGCCATGATTACACCCCTTCTGCTACATAACGGGAAATGAAATAGCCCATTTCATAGATATTAAGGGCGGCAGCGCCACGGGCTAAATCCCCAGTg      >  2:170700/1‑274 (MQ=255)                                                                                                                                                                                                                                                              tGGTAGCGAAGGTTTTGCCCGGCTGACGTACCGGGCGACCGTGGGCGCGCAGACCATCGAACGCCTGCGGTGAGGTCa                                                                                                                                                                                                       >  1:352479/1‑78 (MQ=255)                                                                                                                                                                                                                                                              tGGTAGCGAAGGTTTTGCCCGGCTGACGTACCGGGCGACCGTGGGCGCGCAGACCATCGAACGCCTGCGGTGAGGTCACTTCATGCACCAGGTGGCGGTCGATATATAACAGTGGGGTTTCGTTTTCGGCTTCGTACACAACGTGAGCGt                                                                                                                               >  1:713473/1‑150 (MQ=255)                                                                                                                                                                                                                                                              tGGTAGCGAAGGTTTTGCCCGGCTGACGTACCGGGCGACCGTGGGCGCGCAGACCATCGAACGCCTGCGGTGAGGTCACTTCATGCACCAGGTGGCGGTCGATATATAACAGTGGGGTTTCGTTTTCGGCTTCGTACACAACGTGAGCGTCGAACAATTTTTCGTATAACGTCTTAGCCATGATTACACCCCTTCTGCTAc                                                                            >  1:30952/1‑201 (MQ=255)                                                                                                                                                                                                                                                              tGGTAGCGAAGGTTTTGCCCGGCTGACGTACCGGGCGACCGTGGGCGCGCAGACCATCGAACGCCTGCGGTGAGGTCACTTCATGCACCAGGTGGCGGTCGATATATAACAGTGGGGTTTCGTTTTCGGCTTCGTACACAACGTGAGCGTCGAACAATTTTTCGTATAACGTCTTAGCCATGATTACACCCCTTCTGCTACATAGCGGGCAATGATATCgtgctggca                                                 >  1:67394/1‑220 (MQ=255)                                                                                                                                                                                                                                                               ggTAGCGAAGGTTTTGCCCGGCTGACGTACCGGGCGACCGTGGGCGCGCAGACCATCGAACGCCTGCGGTGAGGTCACTTCATGCACCAGGTGGCGGTCGATATATAACAGTGGGGTTACGTTTTCGGCTTCGTACACAACGTGAGCGTCGCACAATTTTTCGTATAACGTCTTAGCCATGATTACACCCCTTCTGCTACATATCAGGCAATGATATCGCCCCTTACATATGAACTAACGGCGGCAGCGACCCGGGCTAACTGCCCgttccggg  >  2:596295/1‑267 (MQ=255)                                                                                                                                                                                                                                                                  aGCGAAGGTTTTGCCCGGCTGACGTACCGGGCGACCGTGGGCGCGCAGACCATCGAACGCCTGCGGTGAGGTCACTTc                                                                                                                                                                                                   <  2:352473/78‑1 (MQ=255)                                                                                                                                                                                                                                                                  aGCGAAGGTTTTGCCCGGCTGACGTACCGGGCGACCGTGGGCGCGCAGACCATCGAACGCCTGCGGTGAGGTCACTTCATGCACCAGGTGGCGGTCGATATATAACAGTGGGGTTTCGTTTTCGGCTTCGTACACAACGTGAGCGTCGaa                                                                                                                           <  2:713463/150‑1 (MQ=255)                                                                                                                                                                                                                                                                  aGCGAAGGTTTTGCCCGGCTGACGTACCGGGCGACCGTGGGCGCGCAGACCATCGAACGCCTGCGGTGAGGTCACTTCATGCACCAGGTGGCGGTCGATATATAACAGTGGGGTTTCGTTTTCGGCTTCGTACACAACGTGAGCGTCGAACAATTTTTCGTATAACGTCTTAGCCATGATTACACCCCTTCTGCTACATAg                                                                        <  2:30952/201‑1 (MQ=255)                                                                                                                                                                                                                                                                   gCGAAGGTTTTGCCCGGCTGACGTACCGGGCGACCGTGGGCGCGCAGACCATCGAACGc                                                                                                                                                                                                                     >  2:31095/1‑59 (MQ=255)                                                                                                                                                                                                                                                                   gCGAAGGTTTTGCCCGGCTGACGTACCGGGCGACCGTGGGCGCGCAGACCATCGAACGCCTGCGGTGAGGTCACTTCATGCACCAGGTGGCGGTCGATATATAACAGTGGGGTTTCGTTTTCGGCTTCGTACACAACGTGAGCGTCGAACAATTTTTCGTATAACGTCTTAGCCATGATTACACCCCTTCTGCTACATAGCGGGCAATGATATCGCCCATTTCATc                                              >  2:35762/1‑226 (MQ=255)                                                                                                                                                                                                                                                                     gAAGGTTTTGCCCGGCTGACGTACCGGGCGACCGTGGGCGCGCAGACCATCGAACGCCTGCGGTGAGGTCACTTCATGCACCAGGTGGCGGTCGAtatata                                                                                                                                                                         >  2:121371/1‑101 (MQ=255)                                                                                                                                                                                                                                                                      aaGGTTTTGCCCGGCTGACGTACCGGGCGACCGTGGGCGCGCAGACCATCGAACGCCTGCGGTGAGGTCACTTCATGCACCAGGTGGCGGTCGATATATAAc                                                                                                                                                                       >  1:65889/1‑102 (MQ=255)                                                                                                                                                                                                                                                                       aGGTTTTGCCCGGCTGACGTACCGGGCGACCGTGGGCGCGCAGACCATCGAACGCCTGc                                                                                                                                                                                                                 <  1:31095/59‑1 (MQ=255)                                                                                                                                                                                                                                                                       aGGTTTTGCCCGGCTGACGTACCGGGCGACCGTGGGCGCGCAGACCATCGAACGCCTGCGGTGAGGTCACTTCATGCACCAGGTGGCGGt                                                                                                                                                                                  <  1:583570/90‑1 (MQ=255)                                                                                                                                                                                                                                                                       aGGTTTTGCCCGGCTGACGTACCGGGCGACCGTGGGCGCGCAGACCATCGAACGCCTGCGGTGAGGTCACTTCATGCACCAGGTGGCGGTCGATATATAACAGTGGGGTTTCGTTTTCGGCTTCGTACACAACGTGAGCGTCGAACAATTTTTCGTATAACGTCTTAGCCATGATTACACCCCTTCTGCTACATAGCGGGCAATGATATCGCCCATTTCATCGGTa                                          <  1:35762/226‑1 (MQ=255)                                                                                                                                                                                                                                                                         gTTTTGCCCGGCTGACGTACCGGGCGACCGTGGGCGCGCAGACCATCGAACGCCTGCGGTGAGGTCACTTCATGCACCAGGTGGCGGTCGATATATAACAg                                                                                                                                                                     <  1:121372/101‑1 (MQ=255)                                                                                                                                                                                                                                                                          ttttGCCCGGCTGACGTACCGGGCGACCGTGGGCGCGCAGACCATCGAACGCCTGCGGTGAGGTCACTTCATGCACCAGGTGGCGGTCGATATATAACAGTg                                                                                                                                                                   <  2:65888/102‑1 (MQ=255)                                                                                                                                                                                                                                                                               cccGGCTGACGTACCGGGCGACCGTGGGCGCGCAGACCATCCAACGCCTGCGGTGAGGTCGCTTCATGCACCAGCTGGCGGTCGATATATAACAGTGGGGTTTCGTTTTCGGCTTCGTACACAACGTGAGCGTCGAACAATTTTTCGTATAACGTCTTAGCCATGATTACAcccc                                                                                     <  1:60560/175‑1 (MQ=255)                                                                                                                                                                                                                                                                                 cGctatgtagcagaaggggtgtaatcatggctaagacgttatacgaaaaattgttcgacgctcacgttgtgtacgaagccgaaaacgaaac                                                                                                                                                                       >  2:464784‑M1/1‑2 (MQ=255)                                                                                                                                                                                                                                                                                  |                                                                                                                                                                                                                                                               CCGATACCAAAGGCCAGTGCGCCAAACGCGCCGTGGGTGGCGGTATGCGAGTCGCCGCAGACAATGGTCATCCCCGGCAAGGTGACGCCCTGTTCCGGCCCCATTACGTGGACGATCCCCTGATACGGGTGATTCAGGTCATACAGTTCGACGCCAAATTCTTTGCAGTTTTTGATCAGTTCCTGCATCTGGATACGCGCCATTTCACCGCAGGCATTAATGTCTTTGGTCTGGGTAGAGACGTTGTGATCCATGGTAGCGAAGGTTTTGCCCGGCTGACGTACCGGGCGACCGTGGGCGCGCAGACCATCGAACGCCTGCGGTGAGGTCACTTCATGCACCAGGTGGCGGTCGATATATAACAGTGGGGTTTCGTTTTCGGCTTCGTACACAACGTGAGCGTCGAACAATTTTTCGTATAACGTCTTAGCCATGATTACACCCCTTCTGCTACATAGCGGGCAATGATATCGCCCATTTCATCGGTACTAACGGCGGCAGCGCCACGGGCTAAATCCCCGGTGCGAA  >  CP009273/76918‑77445

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.