New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP009273	= 96790	52 (1.350)	11 (0.310)	6/294	NT	17.9%	coding (660/1068 nt)	murG	N‑acetylglucosaminyl transferase
	?	CP009273	= 96902	52 (1.440)					coding (772/1068 nt)	murG	N‑acetylglucosaminyl transferase

CCAATAAATGGCTGGCGAAGATTGCCACCAAAGTGATGCAGGCGTTTCCAGGTGCTTTCCCTAATGCGGAAGTAGTGGGTAACCCGGTGCGTACCGATGTGTTGGCGCTGCCGTTGCCGCAGCAACGTTTGGCTGGACGTGAAGGTCCGGTTCGTGTGCTGGTAGTGGGTGGTTCTCAGGGCGCACGCATTCTTAACCAGACAATGCCGCAGGTTGCTGCGAAACTGGGTGATTCAGTCACTATCTGGCATCAGAGCGGCAAAGGTTCGCAACAATCC‑GTTGAACAGGCGTATGCCGAAGCGGGGCAACCGCAGCATAAAGTGACGGAATTTATTGATGATATGGCGGCGGCGTATGCGTGGGCGGATGTCGTCGTTTGCCGCTCCGGTGCGTTAACGGTGAGTGAAATCGCCGCGGCAGGACTACCGGCGTTGTTTGTGCCGTTTCAACATAAAGACCGCCAGCAATACTGGAATGCGCTACCGCTGGAAAAAGCGGGCGCAGCCAAAATTATCGAGCAGCCACAGCTTAG  >  CP009273/96528‑97059                                                                                                                                                                                                                                                                       |                                                                                                                                                                                                                                                                               ccAATAAATGGTTGGCGAAGATTGCCACCAAAGTGATGCAGGCGTTTCCAGGTGCTTTCCCTAATGCGGAAGTAGTGGCTAACCCGGTGCGTACCGATGTGTTGGCGCTGCCGTGGCCGCATCAACGTTTGGCTGGACGTGAAGGTCCGGATCGTGTGCTGGTAGTGGGTGGTTCTCAGGGCGCACGCATTCTTAACCAGACAATGCCGCAGGTTGCTGCGAAACTAGGTGATTCAGTCACTATCTGGCATCAGAGCGGCAAAGGTTCGcaaca                                                                                                                                                                                                                                                                     <  1:672612/274‑1 (MQ=255) ccAATAAATGGCTGGCGAAGATTGCCAGCAAAGTGATGCAGGCGTTTCCAGGTGCTTTCCCTAATGCGGAAGTAGTGGGTAACCCGGTGCGTACCGATGTGTTGGCGCTGCCGTTGCCGCAGCAACGTTTGGCTGGACGTGAAGGTCCGGTTCGTGTGCTGGTAGTGGGTGGTTCTCAGGGCGCACGCATTCTTAACCAGACAATGCCGCAGGTTGCTGCGAAACTGGGTGATTCAGTCACTATCTGGCATCAGAGCGGCAAAGGTTCGcaaca                                                                                                                                                                                                                                                                     <  1:129596/274‑1 (MQ=255)     tAAATGGCTGGCGAAGATTGCCACCAAAGTGATGCAGGCGTTTCCAGGTGCTTTCCCTAATGCGGAAGTAGTGGGTAACCCGGTGCGTACCGATGTGTTGGCGCTGCCGTTGCCGCAGCAACGTTTGGCTGGACGTGAAGGTCCGGTTCGTGTGCTGGTAGTGGGTGGTTCTCAGGGCGCACGCATTCTTAACCAGAAAATGCCGCAGGTTGCTGCGAAACTGGGTGAGTCAGTCACTATCTGGCATCAGAGCGGCAAGGGTTAGCAGCAATc                                                                                                                                                                                                                                                                  >  2:305441/1‑273 (MQ=255)                                                                      aaGTAGCGGGTAACCCGGTGCGTACCGATGTGTTGGCGCTGCCGTTGCCTCAGCAACGTTTGGCTGGCCGCGAAGGTCCGGTTCGTGTGCTGGTAGTGGGTGGTTCTCAGTGCGCATGCATTCGTAACCAGACAATGCCGCAGGTTGCTGCGAAACTGGGTGATTCAGTCAGTATCTGGCCTCAGAGCTGCAGAGGCTCGTAACAATCC‑GTAGAAAAGGCATATGCCGAAACGGGGCAACGGCAGCAAAAACTGACGAAAACTAtttgttatatt                                                                                                                                                                                              >  2:589855/1‑266 (MQ=255)                                                                          ggtgggttcaccGGTGCGTACCGATGTGTTGGCGCTGCCGTTGCCGCAGCAACGTTTGGCTGGACGTGAAGGTCCGGTTCGTGTGCTGGTAGTGGGTGGTTCTCAGGGCGCACGCATTCTTAACCAGACAATGCCGCAGGTTGCTGCGAAACTGGGTGATTCAGTCACTATCTGGCATCAGAGCGGCAAAGGTTCGCAACAATCC‑GTTGAACAGGCGTATGCCGAAGCGGGGCAACCGCAGCATAAAGTGACGGAATTTATTGATGATATggcgg                                                                                                                                                                                          <  1:19684/265‑1 (MQ=255)                                                                          agtGGGTGACCTGGTGCGTACTGTGGTTTTGGCGCTGCCGTTGCCGCTGCAACGTTTGGCTGGACGTGAAGGTCCGGTTCGTGTGCTGGTAGTGGGTGGTTCTCAGGGCGCACGCATTCTTAACCAGACAATGCCGCAGGTTGCTGCGAACCTGGGTGATTCAGTCACTATCTGGCATCAGAGCGGCAAAGGTTCGCAACAATCC‑GTTGAACAGGCGTATGCCGAAGCGGGGCAACCGCAGCATAAAGTGACGGACTTTATTGATGATATggcgg                                                                                                                                                                                          <  1:589864/275‑1 (MQ=255)                                                                          agtGGGTAACCCGGTGCGTACCGTTGTGTTGGCGCTGCCGTTGCCGCAGCAACGTTTGGCTGGACGTGAAGGTCCGGTTCGTGTGCTGGTAGTGGGTGGTTCTCAGGGCGCACGCATTCTTAACCAGACAATGCCGCAGGTTGCTGCGAAACTGGGTGATTCAGTCACTATCTGGCATCAGAGCGGCAAAGGTTCGCAACAATCC‑GTTGAACAGGCGTATGCCGAAGCGGGGCAACCGCAGCATAAAGTGACGGAATTTATTGATGATATggcgg                                                                                                                                                                                          <  1:349203/275‑1 (MQ=255)                                                                          agtGGGTAACCCGGTGCGTACCGATGTGTTGGCGCTGCCGTTGCCGCAGCAACGTTTGGCTGGACGTGAAGGTCCGGTTCGTGTGCTGGTAGTGGGTGGTTCTCAGGGCGCACGCATTCTTAACCAGACAATGCCGCAGGTTGCTGCGAAACTGGGTGATTCAGTCACTATCTGGCATCAGAGCGGCAAAGGTTCGCAACAATCC‑GTTGAACAGGCGTATGCCGAAGCGGGGCAACCGCAGCATAAAGTGACGGAATTTATtgactgtccatta                                                                                                                                                                                           >  1:4602/1‑264 (MQ=255)                                                                                   cccGGTGCGTACCGATGTGTTGGCGCTGCCGTTGCCGCAGCAACGTTCGGCTGGACGTGAAGGTCCGGTTCGTGTGCTGGTAGTGGGTGGTTCTCAGGGCGCACGCATTCTTAACCAGACAATGCCGCAGGTTGCTGCGAAACTGGGTGATTCAGTCACTATCTGGCATCAGAGCGGCAAAGGTTCGCAACAATCA‑GTTGAACAGGCGTATGCCGAAGCGGGGCAACCGCAGCATAAAGTGACGGAATTTATTGATGATATGGCGGCGGCGTAtt                                                                                                                                                                                 >  1:678462/1‑274 (MQ=255)                                                                                       gTGCGTACCGATGTGTTGGCGCTGCCGTTGCCGCAGCAACGTTTGGCTGGACGTGAAGGTCCGGTTCGTGTGCTGGTAGTGGGTGGTTCTCAGGGCGCACGCATTCTTAACCAGACAATGCCGCAGGTTGCTGCGAAACTGGGTGATTCAGTCACTATCTGGCCTCAGAGCGGCAAAGGTTCGCAACAATCC‑GTTGAACAGGCGTATGCCGAAGCGGGGCAACCGCAGCAAAAAGGGACGGAATTTATTGATGTTATGGCGGCGGCGTAGGCGTg                                                                                                                                                                             >  2:19684/1‑275 (MQ=255)                                                                                            ggccagggtgtTGGCGCTGCCGTTGCCGCAGCAACGTTTGGCTGGACGTGAAGGTCCGGTTCGTGTGCTGGTAGTGGGTGGTTCTCAGGGCGCACGCATTCTTAACCAGACAATGCCGCAGGTTGCTGCGAAACTGGGTGATTCAGTCACTATCTGGCATCAGAGCGGCAAAGGTTCGCAACAATCC‑GTTGAACAGGCGTATGCCGAAGCGGGGCAACCGCAGCATAAAGTGACGGAATTTATTGATGATATGGCGGAGGCGGATGCGTggact                                                                                                                                                                         >  2:208066/8‑271 (MQ=255)                                                                                             gagggggggtgggcgctgccggggGCGCAGCAGCGTTTGGCTGGACGTGAAGGTCCGGTTGGTGTGCTGGTAGTGGGTGGTTCTCAGGGCGCACGCATTCTTAACCAGACAATGCCGCAGGTTGCTGCGAAACTGGGTGATTCAGTCACTATCTGGCATCAGAGCGGCAAAcgacgacatccgcccacgcatacgccgccgccatatcatcaataaattccgtcactttatgctgcggttgccccgcttcggcatacgcctgttcaacggatt                                                                                                                                                                          <  2:488890‑M1/262‑103 (MQ=255)                                                                                               cggggtgtTGGCGCTGCCGTTGCCGCAGCAACGTTTGGCTGGACGTGAAGGTCCGGTTCGTGTGCTGGTAGTGGGTGGTTCTCAGGGCGCACGCATTCTTAACCAGACAATGCCGCAGGTTGCTGCGAAACTGGGTGATTCAGTCACTATCTGGCATCAGAGCGGCAAAGGTTCGCAACAATCC‑GTTGAACAGGCGTATGCCGAAGCGGGGCAACCGCAGCATAAAGTGACGGAATTTATTGATGATATGGCGGCGGCGTATGCGTGGGCGGATg                                                                                                                                                                     <  1:208070/271‑1 (MQ=255)                                                                                                 aTGTGTTGGCGCTGCCGTTGCAGCAGCAGGGTTTGGCTGGACGTGAAGGTCCGGTTCGTGTGCTGGTAGTGGGTGGTTCTCAGGGCGCACGCATTCTTAACCAGACAATGCCGCAGGTTGCTGCGAAACTGGGTGATTCAGTCACTATCTGGCATCAGAGCGGCAAAcgacgacatccgcccangcatacgccgccgccatatcatcaataaattccgtcactttatgctgcggttgccccgcttcggcatacgcctgttcaacgtattgttccg                                                                                                                                                                    >  1:488897‑M1/1‑167 (MQ=255)                                                                                                          cggggccggTGGCGCAGCAACGTTGGGGTGGACGTGTAGGTCCGGTTCGTGGGCTTGTAGTGGGTGGTTCTCAGGGCGCACGCATTCTGAACCAGACAATGCCGCAGGTGGCTGCGAAACTGGGTGAGTCAGTCACTATCTGGCATCAGTGCGGCAAAGGTTCGCAACAATCC‑GTTGAACAGGCGTATGCCGAAGCGGGGCAACCGCAGCATAAAGTGACGTAATTTATTGATGATATGGCGGCGGCGTATGCGTGGGCGGATGTCGTCGtttg                                                                                                                                                           >  2:241500‑M2/5‑270 (MQ=255)                                                                                                                  gcgcggcagnaACGGTTGGCTGGAAGGGACGTGCCGGTTCGTGTGCTGGTAGTGGGTGGTTCTCAGGGCGCACGCATTCTTAACCAGACAATGCCGCAGGTTGCTGCGAAACTGGGTGATTCAGTCACTATCTGGCATCAGAGCGGCAAAGGTTCGCAACAATCC‑GTTGAACAGGCGTATGCCGAAGCGGGGCAACCGCAGCATAAAGTGACGGAATTTATTGATGATATGGCGGCGGCGTATGCGTGGGCGGATGTCGTCGTTTGCCGCTCCgg                                                                                                                                                  <  2:264482/270‑1 (MQ=255)                                                                                                                            agcGTTTGGCTTGACGTGAAGGTCCGGTTCGTGTGCTGGTGTTGGGTGGTTCTCAGGGCGAACGCATTCTTAACCAGACAAGGCCGCAGGTTGCTGCGAAACTGGGTGATTCAGTCACTATCTGGCATCAGAGCGGCAAAGGTTCGCAACAATCC‑GTTGAACAGGCGTATGCCGAAGCGGGGCAACCGCAGCATAAAGTGACGGAATTTATTGATGATATGGCGGCGGCGTATGCGTGGGCGGATGTCGTCGTTTGCCGCTCCGGTGCGTTAACg                                                                                                                                        <  1:305447/273‑1 (MQ=255)                                                                                                                                        gACGTGAAGGTCCGGTTCGTGTGCTGGTAGTGGGTGGTTCTCAGGTCGCACGCATTCTTAACCAGACAATGCCGCAGGTTGCTGCGAAACTGGGTGATTCAGTCACTCTCTGGCATCAGAGCGGCAAAGGTTCGCAACAATCC‑GTTGAACAGGCGTATGCCGAAGCGGGGCa                                                                                                                                                                                                                                   >  1:379967/1‑172 (MQ=255)                                                                                                                                         aCGTGAAGGTCCGGTTCGTGTGCTGGTAGTGGGTGGTTCTCAGGGCGCACGCATTCTTAACCAGACAATGCCGCAGGTTGCTGCGAAACTGGGTGATTCAGTCACTATCTGGCATCAGAGCGGCAAAGGTTCGCAACAATCC‑GTTGCACAGGTGTATGCCGAAGCGGGGCAACCGCAGCATAAAGTGACGGAATTTATTGATGATATGGCGGCGGCGTATGCGTGGGCGGATGTCGTCGTTTGCCGCTCCGGTGCGTTAACGGTGAGTGAAATcg                                                                                                                           >  1:641937/1‑275 (MQ=255)                                                                                                                                                  tCCGGTTCGTGTGCTGGTAGTGGGTGGTTCTCAGGGCGCACGCATTCTTAACCAGACAATGCCGCAGGTTGCTGCGAAACTGGGTGATTCAGTCACTATCTGGCATCAGAGCGGCAAAGGTTCGCAACAATCC‑GTTGAACAGGCGTATGCCGAAGCGGGGCAACCGCAGCATAAAGTGACGGAATTTATTGATGATATGGCGGCGGCGTATGCGTGGGCGGATGTCGTAGTTTGCCGCTCCGGAGCGTTAACGGTGAGTGAAATCGCCGCGGCAg                                                                                                                  >  1:36999/1‑275 (MQ=255)                                                                                                                                                      gTTCGTGTGCTGGTAGTGGGTGGTTCTCAGGGCGCACGCATTCTTAACCAGACAATGCCGCAGGTTGCTGCGAAACTGGGTGATTCAGTCACTATCTGGCATCAGAGCGGCAAAGGTTCGCAACAATCC‑GTTGAACAGGCGTATGCCGAAGCGGGGCAACCGCAGCATAAAGTGACGGAATTTATTGATGATATGGCGGCGGCGTATGCGTGGGCGGATGTCGTCGTTTGCCGCTCCGGTGCGTTAACGGTGGGTGAAATCGCCGCGGCAggcgt                                                                                                              >  2:313565/1‑272 (MQ=255)                                                                                                                                                           tgtgCTGGTAGTGGGTGGTTCTCAGGGCGCACGCATTCTTAACCAGACAATGCCGCAGGTTGCTGCGAAACTGGGTGATTCAGTCACTATCTGGCATCAGAGCGGCAAAcgacgacatccgcccacgcatacgccgccgccatatcatcaataaattccgtcactttatgctgcggttgccccgcttcggcatacgcctgttcaacg                                                                                                                                                                              >  2:712988‑M1/1‑109 (MQ=255)                                                                                                                                                               cTGGTAGTGGGTGGTTCTCAGGGCGCACGCATTCTTAACCAGACAATGCCGCAGGTTGCTGCGAAACTGGGTGATTCAGTCACTATCTGGCATCAGAGCGGCAAAcgacgacatccgcccacgcatacgccgccgccatatcatcaataaattccgtcactttatgctgcggttgccccgcttcggcatacgcctgttcaacggatt                                                                                                                                                                          <  1:712998‑M1/207‑103 (MQ=255)                                                                                                                                                                tGGTAGTGGGTGGTTCTCAGGGCGCACGCATTCTTAACCAGACAATGCCGCAGGTTGCTGCGAAACTGGGTGATTCAGTCACTATCTGGCATCAGAGCGGCAAAGGTTCGCAACAATCC‑Gt                                                                                                                                                                                                                                                              >  2:413036/1‑121 (MQ=255)                                                                                                                                                                tGGTAGTGGGTGGTTCTCAGGGCGCACGCATTCTTAACCAGACAATGCCGCAGGTTGCTGCGAAACTGGGTGATTCAGTCACTATCTGGCATCAGAGCGGCAAAGGTTCGCAACAATCC‑GTTGAACAGGCGTATGCCGAAGCGGGGCAACCGCAGCATAAAGTGa                                                                                                                                                                                                                  >  1:128449/1‑165 (MQ=255)                                                                                                                                                                    aGTGGGTGGTTCTCAGGGNGCACGCATTCTTAACCAGCCAATGCAGCAGGTTGCTGCGAAACTGGGTGATTCAGTCACTATCTGGCATCAGAGCGGCAAAcgacgacatccgcccacgcatacgccgccgccatatcatcaataaattccgtcacttactgctgcggttgccccgcttcggcataggcctgttcaacggatt                                                                                                                                                                          <  1:513642‑M1/202‑103 (MQ=255)                                                                                                                                                                    aGTGGGTGGTTCTCAGGGNGCACGCATTCTTAACCAGACAATGCCGCAGGTTGCTGCGAAACTGGGTGATTCAGTCACGATCTGGCATCAGAGCGGCAAAcgacgacatccgcccacgcatacgccgccgccatatcatcaataaattccgtcactttatgctgcggttgccacgctttggcatactcctgttcaacggatt                                                                                                                                                                          <  1:491988‑M1/202‑103 (MQ=255)                                                                                                                                                                    aGTGGGTGGTTCTCAGGGCGCACGCATTCTTAACCAGACAATGCCGCAGGTTGCTGCGAAACTGGGTGATTCAGTCACTATCTGGCATCAGAGCGGCAAAGGTTCGCAACAATCC‑GTTGaa                                                                                                                                                                                                                                                          <  1:413043/121‑1 (MQ=255)                                                                                                                                                                    aGTGGGTGGTTCTCAGGGCGCACGCATTCTTAACCAGACAATGCCGCAGGTTGCTGCGAAACTGGGTGATTCAGTCACTATCTGGCATCAGAGCGGCAAAGGTTCGCAACAATCC‑GTTGAACAGGCGTATGCCGAAGCGGGGCAACCGCAGCATAAAGTGACGGa                                                                                                                                                                                                              <  2:128448/165‑1 (MQ=255)                                                                                                                                                                            gtTCTCAGGGCGCACGCATTCTTAACCAGACAATGCCGCAGGTTGCTGCGAAACTGGGTGATTCAGTCACTATCTGGCATCAGAGCGGCAAAGGTTCGCAACAATCC‑GTTGAACAGGCGTATGCCGAAGCGGGGCAACCGCAGCATaa                                                                                                                                                                                                                       >  1:691593/1‑148 (MQ=255)                                                                                                                                                                               ctcAGGGCGCACGCATTCTTAACCAGAGAATGCCGCAGGTTGCTGCGAAACTGGGTGATTCAGTCACTATCTGGCATCAGAGCGGCAAAGGTTCGCAACAATCC‑GTTGAACAGGCGTATGCCGAAGCGGGGCAACCGCAGCATAAAGTGACGGAATTTATTGATGATATGGCGGCGGCGTATGCGTGGGCGGATGTCGTCGTTTGCCGCTCCGGTGCGTTAACGGTGAGTGAAATCGCCGCGGCAGGACTACCGGCGTCGTTTGTGCCGTTTCaa                                                                                     >  1:409722/1‑275 (MQ=255)                                                                                                                                                                                tcAGGGCGCACGCATTCTTAACCAGACAATGCCGCAGGTTGCTGCGAAACTGGGTGATTCAGTCACTATCTGGCATCAGAGCGGCAAAGGTTCGCAACAATCC‑GTTGAACAGGCGTATGCCGAAGCGGGGCAACCGCAGCATAAAGTg                                                                                                                                                                                                                   <  2:691584/148‑1 (MQ=255)                                                                                                                                                                                     gcgcACGCATTCTTAAGCAGACAATGCCGCAGGTTGCTGCGAAACTGGGTGAGTCAGTCACTATCTGGCATCAGAGCGGCAAAGGTTCGCAACAAGCC‑GTTGAACAGGCGTATGCCGAAGCGGCGCAACCGCAGCATAAAGTGACGGAATTTATTGATGATATGGCGGCGGCGTATGCGTGGGCGGATGTCGTCGTTTGCCGCTCCGGTGCGTTAACGGTGAGTGAAATCGCCGCGGCAGGACTACCGGCGTTGTTTGTGCCGTTTCAACATaa                                                                                <  1:572836/274‑1 (MQ=255)                                                                                                                                                                                       gcacgcaTTCTTAACCAGACAATGCCGCAGGTTGCTGCGAAACTGGGTGATTCAGTCACTATCTGGCATCAGAGCGGCAAAGGTTCGCAACAATCC‑Gt                                                                                                                                                                                                                                                              >  2:155367/1‑98 (MQ=255)                                                                                                                                                                                        cacgcaTTCTTAACCAGACAATGCCGCAGGTTGCTGCGAAACTGGGTGATTCAGTCACTANCTGGCATCAGAGCGGCAAAGGTTCGCAACAATCC‑GTTGAACAGGCGTATGCCGAAGCGGGGCAACCGCAGCATAAAGTGACGGAATTTATTGATGATATGGCGGCGGCGTATGCGTGGGCGGATGTCGTCGTTTGCCGCTCCGGTGCGTTAACGGTGAGTGAAATCGCCGCGGCAGGACTAcc                                                                                                           <  1:529291/244‑1 (MQ=255)                                                                                                                                                                                           gcaTTCTTAACCAGACAATGCCGCAGGTTGCTGCGAAACTGGGTGATTCAGTCACTATCTGGCATCAGAGCGGCAAAGGTTCGCAACAATCC‑GTTGaa                                                                                                                                                                                                                                                          <  1:155370/98‑1 (MQ=255)                                                                                                                                                                                              ttCTTAACCAGACAATGCCGCAGGTTGCTGCGAAACTGGGTGATTCAGTCACTATCTGGCATCAGAGCGGCAAAGGTTCGCAACAATCC‑GTTGAACAGGCGTATGCCGAAGCGGGGCAACCGCAGCATAAAGTGACGGAATTTATTGATGATATGGCGGCGGCGTATGCGTGGGCGGATGTCGTCGTTTGCCGCTCCGGTGCGTTAACGGTGAGTGAAATCGCCGCGGCAGGACTACCGGCGTTGTTTGTGCCGTTTCAACATAAAGACCGCCAg                                                                      <  1:313571/275‑1 (MQ=255)                                                                                                                                                                                               tCTTAACCAGACAATGCCGCAGGTTGCTGCGAAACTGGGTGATTCAGTCACTATCTGGCATCAGAGCGGCAAAGGTTCGCAACAATCC‑GTTGAACAGGCGTATGCCGAAGCGGGGCAACCGCAGCATAAAGTGACGGAATTTATTGATGATATGGCGGCGGCGTATGCGTGGGCGGATGTCGTCGTTTGCCGCTCCGGTGCGTTAACGGTGAGTGAAATCGCCGCGGCAGGACTACCGGCGTTGTTTGTGCCGTTTCAACATAAAAACCGCCAg                                                                      >  1:273006/1‑274 (MQ=255)                                                                                                                                                                                               gctggaCCAGACGATGCAGGATGTTGCTGAGAGACTGGGTGAGTCAGTCACTATCTGGCATCAGAGCGGCAAAGGTTCGGAACAATCC‑GTTGAACAGGCGTATGCCGAAGCGGGGCAACCGCAGCATAAAGTGACGGAATTTATTGGTGAGATGGCGGCGGCGTATGCGTGGGCGGATGTCGTCGTTTGCCGCTCCGGTGCGTTAACGGTGAGTGAAATCGCCGCGGCAGGACTACCGGCGTTGTTTGTGCCGTTTCAACATAAAGACCGCCAg                                                                      <  2:678453/269‑1 (MQ=255)                                                                                                                                                                                                cTTAACCAGACAATGCCGCAGGTTGCTGCGAAACTGGGTGATTCAGTCACTATCTGGCATCAGAGCGGCAAA                                                                                                                                                                                                                                                                                >  2:273010‑M1/1‑72 (MQ=255)                                                                                                                                                                                                    aCCAGACAATGCCGCAGGTTGCTGCGAAACTGGGTGATTCAGTCACTATCTGGCATCAGAGCGGCAAAGGtt                                                                                                                                                                                                                                                                            <  1:273015/72‑1 (MQ=255)                                                                                                                                                                                                     ccAGACAATGCCGCAGGTTGCTGCGAAACTGGGTGATTCAGTCACTATCTGGCATCAGAGCGGCAAAcgacgacatccgcccacgcatacgccgccgccatatcatcaataaattccgtcactttatgctgcggttgccccgcttcggcatacgcctgttcaacg                                                                                                                                                                              >  1:698670‑M1/1‑67 (MQ=255)                                                                                                                                                                                                       aGACAAGGCCGCAGGTTGCTGCGAAACTGGGTGATTCAGTCACTATCTGGCATCAGAGCGGCAAAGGTTCGCAACAATCC‑GTTGAACAGGCGTATGCCGAAGCGGGGCAACCGCAGCATAAAGTGACGGAATTTATTGATGATATGGCGGCGGCGTATGCGTGGACGGATGTCGTCGTTTGCCNCTCCGGTGCGTTAACGGTGAGTGAAATCGCCGCGGCAGGACTACCGGCGTTGTTTGTGCCGTTTCAACATAAAGACCGCCAGCAATAc                                                                >  1:523672/1‑272 (MQ=255)                                                                                                                                                                                                         tccatgcCGCATGTTGCTGCGAAACTGGGTGATTCAGTCACTATCTGTCTTCAGAGCGGCAAAcgactacatccgcccacgcatacgccgccaccatatcatcaataaattctgtcactttatgctgcggttgccctgcttcggcatacgtctgttcaacggatt                                                                                                                                                                          <  1:538143‑M1/162‑103 (MQ=255)                                                                                                                                                                                                         aCAATGCCGCAGGTTGCTGCGAAACTGGGTGATTCAGTCACTATCTGGCATCAGAGCGGCAAAcgacgacatccgcccacgcatacgccgccgccatatcatcaataaattccgtcactttatgctgcggttgccccgcttcggcatacgcctgttcaacggatt                                                                                                                                                                          <  2:698661‑M1/165‑103 (MQ=255)                                                                                                                                                                                                         aCAATGCCGCAGGTTGCTGCGAAACTGGGTGATTCAGTCACTATCTGGCATCAGAGCGGCAAAGGTTCGCAACAATCC‑GTTGAACAGGCGTATGCCGAAGCGGGGCAACCGCAGCATAAAGTGACGGAATTTATTGATGATATGGCGACGGCGTATGCNTGGGCGGATGTCGTCGTTTGCCGCTCCGGTg                                                                                                                                                >  1:655979/1‑190 (MQ=255)                                                                                                                                                                                                         aCAATGCCGCAGGTTGCTGCGAAACTAGGTGATTAAGTCACTATCTGGCATCAGAGCGGCAAAGGTTCGCAACAATCC‑GTTGAACAGGCGTATGCCGAAGCGGGGCAACCGCAGCATAAAGTGACGGAATTTATTGATGATATGGCGGCGGCGTATGCGTGGGCGGATGTCGTCGTTTGCCGCNCCGGTGCGNTAACGGTGAGTGAAATCGCCGCGGCAGGACTACCGGCg                                                                                                       >  1:468783/1‑231 (MQ=255)                                                                                                                                                                                                             ggCCGCGGGTTGCTGCGGAACTGGGTGATTCAGTCACTATCTGGCATCAGAGCGGCAAAGGTTCGCAACAATCC‑GTTGAACAGGCGTATGCCGAAGCGGGGCAACCGCAGCATAAAGTGACGGAATTTATTGATGATATGGCGGCGGCGTATGCGTGGGCGGATGTCGTCGTTTGCCGCTCCGGTGCGtt                                                                                                                                            <  2:655970/189‑1 (MQ=255)                                                                                                                                                                                                                  cAGGTTGCTGCGAAACTGGGTGATTCAGTCACTATCTGGCATCAGAGCGGCAAAGGTTCGCAACAATCC‑GTTGAACAGGCGTATGCCg                                                                                                                                                                                                                                             >  2:702291/1‑88 (MQ=255)                                                                                                                                                                                                                   aGGTTGCTGCGAAACTGGGTGATTCAGTCACTATCTGGCATCAGAGCGGCAAAcgacgacatccgcccacgcatacgccgccgccatatcatcaataaattccgtcactttatgctgcggttgccccgcttcggcatacgcctgttcaac                                                                                                                                                                               >  1:605500‑M1/1‑53 (MQ=255)                                                                                                                                                                                                                      ttGCTGCGAAACTGGGTGATTCAGTCACTATCTGGCATCAGAGCGGCAAAGGGTCGCAACAATCC‑GGTGAACAGGCGGATGCCGAAGc                                                                                                                                                                                                                                         <  1:702300/88‑1 (MQ=255)                                                                                                                                                                                                                       tgctgcGAAACTGGGTGATTCAGTCACTATCTGGCATCAGAGCGGCAAAcgacgacatccgcccacgcatacgccgccgccatatcatcaataaattccgtcactttatgctgcggttgccccgcttcggcatacgcctgttcaacggat                                                                                                                                                                           <  2:605491‑M1/150‑102 (MQ=255)                                                                                                                                                                                                                                    ggTGATTCAGACACTATCTGGCATCAGAGCGGCAAAGGTTCGCAACAATCC‑GTTGAACAGGCGTATGCCGAAGCGGGGCAACCGCAGCATAAAGTGACg                                                                                                                                                                                                                >  1:703328/1‑99 (MQ=255)                                                                                                                                                                                                                                      tGATTCAGTCACTATCTGGCATCAGAGCGGCAAAGGTTCGCAACAATCC‑GTTGAACAGGCGTATGCCGAAGCGGGGCAACCGCAGCATAAAGTGa                                                                                                                                                                                                                  >  2:618357/1‑95 (MQ=255)                                                                                                                                                                                                                                        aTTCAGTCACTATCTGGCATCAGAGCGGCAAAGGTTCGCAACAATCC‑GTTGAACAGGCGTATGCCGAAGCGGGGCAACCGCAGCATAAAGTGACGGAAt                                                                                                                                                                                                            <  2:703319/99‑1 (MQ=255)                                                                                                                                                                                                                                          tCAGTCACTATCTGGCATCAGAGCGGCAAAGGTTCGCAACAATCC‑GTTGAACAGGCGTATGCCGAAGCGGGGCAACCGCAGCATAAAGTGACGGa                                                                                                                                                                                                              <  1:618366/95‑1 (MQ=255)                                                                                                                                                                                                                                                    tCTGGCATCAGAGCGGCAAAGGTTCGCAACAATCC‑GTTGAACAGGCGTATGCCGAAGCGGGGCAACCGCAGCATAAAGTGACGGAATTTATTGATGATATGGCGGCGGCGTATGCGTGGGCGGATGTCGTCGTTTGCCGCTCCGGTACGTTAGCGGTGAGTGAAATCGCCGCGGCAGGACTACCGGCGTTGTTTGTGCCGTTTCAACATAAAGAc                                                                            >  1:623063/1‑215 (MQ=255)                                                                                                                                                                                                                                                    tCTGGCATAAGAGCGGCAAAGGTTCGCAACAATCC‑Gt                                                                                                                                                                                                                                                              >  1:187968/1‑37 (MQ=255)                                                                                                                                                                                                                                                        ggatcggggCGGCAAAGGTTCGCAACAATCC‑GTTGAACAGGCGTATGCCGAAGCGGGGCAACCGCAGCATAAAGTGACGGAATTTATTGATGATATGGCGGCGGCGTATGCGTGGGCGGATGTCGTCGTTTGCCGCTCCGGTGCGTTAACGGTGAGTGAAATCGCCGCGGCAGGACTACCGGCGTTGTTTGTGCCGTTTCAACATAAAGACCGcc                                                                        <  2:623054/207‑1 (MQ=255)                                                                                                                                                                                                                                                        gCATCAGAGCGGCAAAGGTTCGCAACAATCC‑GTTGaa                                                                                                                                                                                                                                                          <  2:187965/37‑1 (MQ=255)                                                                                                                                                                                                                                                        gCATCAGAGCGGCAAAGGTTCGCAACAATCC‑GTTGAACAGGCGTATGCCGAAGCGGGGCAACCGCAGCATAAAGTGACGGAATTTATTGATGATATGGCGGCGGCGTATGCGTGGGCGGATGTCGTCGTTTGCCGCTCCGGTGCGTTAACGGTGAGTGAAATCGCCGCGGCAGGACTACCGGCGTTGTTTGTGCCGTTTCAACATAAAGACCGCCAGCAATACTGGAATGCGCTACCGCTGGAAAAAGCGGGCGCAGCCAAAATAATCGagcagc            >  1:242297/1‑275 (MQ=255)                                                                                                                                                                                                                                                            cAGAGCGGCAAAGGTTCGCAACAATCC‑GTTGAACAGGCGTATGCCGAAGCGGGGCAACCGCAGCATAAAGTGACGGAATTTATTGATGATATGGCGGCGGCGTATGCGTGGGCGGATGTCGTCGTTTGCCGCTCCGGTGCGTTAACGGTGAGTGAAATCGCCGCGGCAGGACTAc                                                                                                            >  2:578969/1‑175 (MQ=255)                                                                                                                                                                                                                                                              gagCGGCAAAGGTTCGCAACAATCC‑GTTGAACAGGCGTATGCCGAAGCGGGGCAACCGCAGCATAAAGTGACGGAATTTATTGATGATATggcggcgg                                                                                                                                                                                       >  1:103583/1‑98 (MQ=255)                                                                                                                                                                                                                                                               cgCGGCAAAGANACGGAAAAAGCCGGTGGAAGAGG‑GTAGGGCGAAGGGGGGGGATCGCAGCATAAAGTGGAGGTATTTATTGATGGAATGGGGGCGGCGTAGGCGTGGGCGGATGGCGTAGGTTGCCGCTCCGGTGCGTTAACGGTGAGTGAAATCGCCGCGGCAGGACTACCGGCGTGGTTGGTGCCGGTTCAACATAAAGACCGCCAGCAATACTGGAATGCGCTACCGCTGGAAAAAGCGGGCGCAGCCAAAATTATCGAGCAGCCACAGCt     <  2:52760/274‑1 (MQ=255)                                                                                                                                                                                                                                                               agCGGCAAAcgacgacatccgcccacgcatacgccgccgccatatcatcaataaattccgtcactttatgctgcggttgccccgcttcggcatacgc                                                                                                                                                                                        <  1:189145‑M1/97‑89 (MQ=255)                                                                                                                                                                                                                                                               agCGGCAAAcgacgacatccgcccacgcatacgcagccgccatatcatcaataaattccgtcactttatgctgcggttgccccgctt                                                                                                                                                                                                  <  2:602216‑M1/87‑79 (MQ=255)                                                                                                                                                                                                                                                                gCGGCAAAGGTTCGCAACAATCC‑GTTGAACAGGCGTATGCCGAAGCGGGGCAACCGCAGCATAAAGTGACGGAATTTATTGATGATATGGCGGCGGCGTATGCGTGGGCGGATGTCGTCGTTTGCCGCTCCGGTGCGTTAACGGTGAGTGAAATCGCCGCGGCAGGACTACCGGc                                                                                                        <  1:578978/175‑1 (MQ=255)                                                                                                                                                                                                                                                                 cGGCAAAcgacgacatccgcccacgcatacgccgccgccatatcatcaataaattccgtcactttatgctgcggttgccccgcttcggcatacgcctgttcaacggat                                                                                                                                                                           <  1:550123‑M1/108‑102 (MQ=255)                                                                                                                                                                                                                                                                 cGGCAAAcgacgacatccgcccacgcatacgccgccgccatatcatc                                                                                                                                                                                                                                        <  1:616500‑M1/47‑41 (MQ=255)                                                                                                                                                                                                                                                                  ggCAAAGGTTCGCAACAATCC‑GTTGAACAGGCGTATGCCGAAGCGGGGCAACCGCAGCATAAAGTGACGGAATTTATTGATGATATGGCGGCGGCGTa                                                                                                                                                                                   <  2:103582/98‑1 (MQ=255)                                                                                                                                                                                                                                                                    cAAAcgacgacatccgcccacgcatacgccgccgccatatcatcaataaattacgtcactttatgctgcggttgccccgcttcggcatacgcctgttcaacggattgttgcgaacctttgccgcactgatgccagatagtgactgactcacccagtttcgcagccacctgcggcattgtctggttcagaatgcgtgcgccctgagaaccacccactacaagcccacgaaccggacctacacgtccaccccaacgttgctgcgccaccggccccg  >  2:241500‑M1/1‑4 (MQ=255)                                                                                                                                                                                                                                                                       |                                                                                                                                                                                                                                                                               CCAATAAATGGCTGGCGAAGATTGCCACCAAAGTGATGCAGGCGTTTCCAGGTGCTTTCCCTAATGCGGAAGTAGTGGGTAACCCGGTGCGTACCGATGTGTTGGCGCTGCCGTTGCCGCAGCAACGTTTGGCTGGACGTGAAGGTCCGGTTCGTGTGCTGGTAGTGGGTGGTTCTCAGGGCGCACGCATTCTTAACCAGACAATGCCGCAGGTTGCTGCGAAACTGGGTGATTCAGTCACTATCTGGCATCAGAGCGGCAAAGGTTCGCAACAATCC‑GTTGAACAGGCGTATGCCGAAGCGGGGCAACCGCAGCATAAAGTGACGGAATTTATTGATGATATGGCGGCGGCGTATGCGTGGGCGGATGTCGTCGTTTGCCGCTCCGGTGCGTTAACGGTGAGTGAAATCGCCGCGGCAGGACTACCGGCGTTGTTTGTGCCGTTTCAACATAAAGACCGCCAGCAATACTGGAATGCGCTACCGCTGGAAAAAGCGGGCGCAGCCAAAATTATCGAGCAGCCACAGCTTAG  >  CP009273/96528‑97059

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.