New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP009273	= 96790	52 (1.350)	11 (0.310)	6/294	NT	17.9%	coding (660/1068 nt)	murG	N‑acetylglucosaminyl transferase
	?	CP009273	= 96902	52 (1.440)					coding (772/1068 nt)	murG	N‑acetylglucosaminyl transferase

CGCTGCCGTTGCCGCAGCAACGTTTGGCTGGACGTGAAGGTCCGGTTCGTGTGCTGGTAGTGGGTGGTTCTCAGGGCGCACGCATTCTTAACCAGACAATGCCGCAGGTTGCTGCGAAACTGGGTGATTCAGTCACTATCTGGCATCAGAGCGGCAAAGGTTCGCAACAATCC‑GTTGAACAGGCGTATGCCGAAGCGGGGCAACCGCAGCATAAAGTGACGGAATTTATTGATGATATGGCGGCGGCGTATGCGTGGGCGGATGTCGTCGTTTGCCGCTCCGGTGCGTTAACGGTGAGTGAAATCGCCGCGGCAGGACTACCGGCGTTGTTTGTGCCGTTTCAACATAAAGACCGCCAGCAATACTGGAATGCGCTACCGCTGGAAAAAGCGGGCGCAGCCAAAATTATCGAGCAGCCACAGCTTAGCGTGGATGCTGTCGCCAACACCCTGGCCGGGTGGTCGCGAGAAACCTTATTAACCATGGCAGAAC‑GCGCCCGCGCTGCATCCATTCCGGATGCCACCGAGCGAGTGGCAA  >  CP009273/96633‑97169                                                                                                                                                                                                                                                                               |                                                                                                                                                                                                                                                                             cggggccggTGGCGCAGCAACGTTGGGGTGGACGTGTAGGTCCGGTTCGTGGGCTTGTAGTGGGTGGTTCTCAGGGCGCACGCATTCTGAACCAGACAATGCCGCAGGTGGCTGCGAAACTGGGTGAGTCAGTCACTATCTGGCATCAGTGCGGCAAAGGTTCGCAACAATCC‑GTTGAACAGGCGTATGCCGAAGCGGGGCAACCGCAGCATAAAGTGACGTAATTTATTGATGATATGGCGGCGGCGTATGCGTGGGCGGATGTCGTCGtttg                                                                                                                                                                                                                                                                          >  2:241500‑M2/5‑270 (MQ=255)         gcgcggcagnaACGGTTGGCTGGAAGGGACGTGCCGGTTCGTGTGCTGGTAGTGGGTGGTTCTCAGGGCGCACGCATTCTTAACCAGACAATGCCGCAGGTTGCTGCGAAACTGGGTGATTCAGTCACTATCTGGCATCAGAGCGGCAAAGGTTCGCAACAATCC‑GTTGAACAGGCGTATGCCGAAGCGGGGCAACCGCAGCATAAAGTGACGGAATTTATTGATGATATGGCGGCGGCGTATGCGTGGGCGGATGTCGTCGTTTGCCGCTCCgg                                                                                                                                                                                                                                                                 <  2:264482/270‑1 (MQ=255)                   agcGTTTGGCTTGACGTGAAGGTCCGGTTCGTGTGCTGGTGTTGGGTGGTTCTCAGGGCGAACGCATTCTTAACCAGACAAGGCCGCAGGTTGCTGCGAAACTGGGTGATTCAGTCACTATCTGGCATCAGAGCGGCAAAGGTTCGCAACAATCC‑GTTGAACAGGCGTATGCCGAAGCGGGGCAACCGCAGCATAAAGTGACGGAATTTATTGATGATATGGCGGCGGCGTATGCGTGGGCGGATGTCGTCGTTTGCCGCTCCGGTGCGTTAACg                                                                                                                                                                                                                                                       <  1:305447/273‑1 (MQ=255)                                aCGTGAAGGTCCGGTTCGTGTGCTGGTAGTGGGTGGTTCTCAGGGCGCACGCATTCTTAACCAGACAATGCCGCAGGTTGCTGCGAAACTGGGTGATTCAGTCACTATCTGGCATCAGAGCGGCAAAGGTTCGCAACAATCC‑GTTGCACAGGTGTATGCCGAAGCGGGGCAACCGCAGCATAAAGTGACGGAATTTATTGATGATATGGCGGCGGCGTATGCGTGGGCGGATGTCGTCGTTTGCCGCTCCGGTGCGTTAACGGTGAGTGAAATcg                                                                                                                                                                                                                                          >  1:641937/1‑275 (MQ=255)                                         tCCGGTTCGTGTGCTGGTAGTGGGTGGTTCTCAGGGCGCACGCATTCTTAACCAGACAATGCCGCAGGTTGCTGCGAAACTGGGTGATTCAGTCACTATCTGGCATCAGAGCGGCAAAGGTTCGCAACAATCC‑GTTGAACAGGCGTATGCCGAAGCGGGGCAACCGCAGCATAAAGTGACGGAATTTATTGATGATATGGCGGCGGCGTATGCGTGGGCGGATGTCGTAGTTTGCCGCTCCGGAGCGTTAACGGTGAGTGAAATCGCCGCGGCAg                                                                                                                                                                                                                                 >  1:36999/1‑275 (MQ=255)                                             gTTCGTGTGCTGGTAGTGGGTGGTTCTCAGGGCGCACGCATTCTTAACCAGACAATGCCGCAGGTTGCTGCGAAACTGGGTGATTCAGTCACTATCTGGCATCAGAGCGGCAAAGGTTCGCAACAATCC‑GTTGAACAGGCGTATGCCGAAGCGGGGCAACCGCAGCATAAAGTGACGGAATTTATTGATGATATGGCGGCGGCGTATGCGTGGGCGGATGTCGTCGTTTGCCGCTCCGGTGCGTTAACGGTGGGTGAAATCGCCGCGGCAggcgt                                                                                                                                                                                                                             >  2:313565/1‑272 (MQ=255)                                                                      ctcAGGGCGCACGCATTCTTAACCAGAGAATGCCGCAGGTTGCTGCGAAACTGGGTGATTCAGTCACTATCTGGCATCAGAGCGGCAAAGGTTCGCAACAATCC‑GTTGAACAGGCGTATGCCGAAGCGGGGCAACCGCAGCATAAAGTGACGGAATTTATTGATGATATGGCGGCGGCGTATGCGTGGGCGGATGTCGTCGTTTGCCGCTCCGGTGCGTTAACGGTGAGTGAAATCGCCGCGGCAGGACTACCGGCGTCGTTTGTGCCGTTTCaa                                                                                                                                                                                                    >  1:409722/1‑275 (MQ=255)                                                                            gcgcACGCATTCTTAAGCAGACAATGCCGCAGGTTGCTGCGAAACTGGGTGAGTCAGTCACTATCTGGCATCAGAGCGGCAAAGGTTCGCAACAAGCC‑GTTGAACAGGCGTATGCCGAAGCGGCGCAACCGCAGCATAAAGTGACGGAATTTATTGATGATATGGCGGCGGCGTATGCGTGGGCGGATGTCGTCGTTTGCCGCTCCGGTGCGTTAACGGTGAGTGAAATCGCCGCGGCAGGACTACCGGCGTTGTTTGTGCCGTTTCAACATaa                                                                                                                                                                                               <  1:572836/274‑1 (MQ=255)                                                                               cacgcaTTCTTAACCAGACAATGCCGCAGGTTGCTGCGAAACTGGGTGATTCAGTCACTANCTGGCATCAGAGCGGCAAAGGTTCGCAACAATCC‑GTTGAACAGGCGTATGCCGAAGCGGGGCAACCGCAGCATAAAGTGACGGAATTTATTGATGATATGGCGGCGGCGTATGCGTGGGCGGATGTCGTCGTTTGCCGCTCCGGTGCGTTAACGGTGAGTGAAATCGCCGCGGCAGGACTAcc                                                                                                                                                                                                                          <  1:529291/244‑1 (MQ=255)                                                                                     ttCTTAACCAGACAATGCCGCAGGTTGCTGCGAAACTGGGTGATTCAGTCACTATCTGGCATCAGAGCGGCAAAGGTTCGCAACAATCC‑GTTGAACAGGCGTATGCCGAAGCGGGGCAACCGCAGCATAAAGTGACGGAATTTATTGATGATATGGCGGCGGCGTATGCGTGGGCGGATGTCGTCGTTTGCCGCTCCGGTGCGTTAACGGTGAGTGAAATCGCCGCGGCAGGACTACCGGCGTTGTTTGTGCCGTTTCAACATAAAGACCGCCAg                                                                                                                                                                                     <  1:313571/275‑1 (MQ=255)                                                                                      tCTTAACCAGACAATGCCGCAGGTTGCTGCGAAACTGGGTGATTCAGTCACTATCTGGCATCAGAGCGGCAAAGGTTCGCAACAATCC‑GTTGAACAGGCGTATGCCGAAGCGGGGCAACCGCAGCATAAAGTGACGGAATTTATTGATGATATGGCGGCGGCGTATGCGTGGGCGGATGTCGTCGTTTGCCGCTCCGGTGCGTTAACGGTGAGTGAAATCGCCGCGGCAGGACTACCGGCGTTGTTTGTGCCGTTTCAACATAAAAACCGCCAg                                                                                                                                                                                     >  1:273006/1‑274 (MQ=255)                                                                                      gctggaCCAGACGATGCAGGATGTTGCTGAGAGACTGGGTGAGTCAGTCACTATCTGGCATCAGAGCGGCAAAGGTTCGGAACAATCC‑GTTGAACAGGCGTATGCCGAAGCGGGGCAACCGCAGCATAAAGTGACGGAATTTATTGGTGAGATGGCGGCGGCGTATGCGTGGGCGGATGTCGTCGTTTGCCGCTCCGGTGCGTTAACGGTGAGTGAAATCGCCGCGGCAGGACTACCGGCGTTGTTTGTGCCGTTTCAACATAAAGACCGCCAg                                                                                                                                                                                     <  2:678453/269‑1 (MQ=255)                                                                                              aGACAAGGCCGCAGGTTGCTGCGAAACTGGGTGATTCAGTCACTATCTGGCATCAGAGCGGCAAAGGTTCGCAACAATCC‑GTTGAACAGGCGTATGCCGAAGCGGGGCAACCGCAGCATAAAGTGACGGAATTTATTGATGATATGGCGGCGGCGTATGCGTGGACGGATGTCGTCGTTTGCCNCTCCGGTGCGTTAACGGTGAGTGAAATCGCCGCGGCAGGACTACCGGCGTTGTTTGTGCCGTTTCAACATAAAGACCGCCAGCAATAc                                                                                                                                                                               >  1:523672/1‑272 (MQ=255)                                                                                                aCAATGCCGCAGGTTGCTGCGAAACTGGGTGATTCAGTCACTATCTGGCATCAGAGCGGCAAAGGTTCGCAACAATCC‑GTTGAACAGGCGTATGCCGAAGCGGGGCAACCGCAGCATAAAGTGACGGAATTTATTGATGATATGGCGACGGCGTATGCNTGGGCGGATGTCGTCGTTTGCCGCTCCGGTg                                                                                                                                                                                                                                                               >  1:655979/1‑190 (MQ=255)                                                                                                aCAATGCCGCAGGTTGCTGCGAAACTAGGTGATTAAGTCACTATCTGGCATCAGAGCGGCAAAGGTTCGCAACAATCC‑GTTGAACAGGCGTATGCCGAAGCGGGGCAACCGCAGCATAAAGTGACGGAATTTATTGATGATATGGCGGCGGCGTATGCGTGGGCGGATGTCGTCGTTTGCCGCNCCGGTGCGNTAACGGTGAGTGAAATCGCCGCGGCAGGACTACCGGCg                                                                                                                                                                                                                      >  1:468783/1‑231 (MQ=255)                                                                                                    ggCCGCGGGTTGCTGCGGAACTGGGTGATTCAGTCACTATCTGGCATCAGAGCGGCAAAGGTTCGCAACAATCC‑GTTGAACAGGCGTATGCCGAAGCGGGGCAACCGCAGCATAAAGTGACGGAATTTATTGATGATATGGCGGCGGCGTATGCGTGGGCGGATGTCGTCGTTTGCCGCTCCGGTGCGtt                                                                                                                                                                                                                                                           <  2:655970/189‑1 (MQ=255)                                                                                                                                           tCTGGCATCAGAGCGGCAAAGGTTCGCAACAATCC‑GTTGAACAGGCGTATGCCGAAGCGGGGCAACCGCAGCATAAAGTGACGGAATTTATTGATGATATGGCGGCGGCGTATGCGTGGGCGGATGTCGTCGTTTGCCGCTCCGGTACGTTAGCGGTGAGTGAAATCGCCGCGGCAGGACTACCGGCGTTGTTTGTGCCGTTTCAACATAAAGAc                                                                                                                                                                                           >  1:623063/1‑215 (MQ=255)                                                                                                                                               ggatcggggCGGCAAAGGTTCGCAACAATCC‑GTTGAACAGGCGTATGCCGAAGCGGGGCAACCGCAGCATAAAGTGACGGAATTTATTGATGATATGGCGGCGGCGTATGCGTGGGCGGATGTCGTCGTTTGCCGCTCCGGTGCGTTAACGGTGAGTGAAATCGCCGCGGCAGGACTACCGGCGTTGTTTGTGCCGTTTCAACATAAAGACCGcc                                                                                                                                                                                       <  2:623054/207‑1 (MQ=255)                                                                                                                                               gCATCAGAGCGGCAAAGGTTCGCAACAATCC‑GTTGAACAGGCGTATGCCGAAGCGGGGCAACCGCAGCATAAAGTGACGGAATTTATTGATGATATGGCGGCGGCGTATGCGTGGGCGGATGTCGTCGTTTGCCGCTCCGGTGCGTTAACGGTGAGTGAAATCGCCGCGGCAGGACTACCGGCGTTGTTTGTGCCGTTTCAACATAAAGACCGCCAGCAATACTGGAATGCGCTACCGCTGGAAAAAGCGGGCGCAGCCAAAATAATCGagcagc                                                                                                                           >  1:242297/1‑275 (MQ=255)                                                                                                                                                   cAGAGCGGCAAAGGTTCGCAACAATCC‑GTTGAACAGGCGTATGCCGAAGCGGGGCAACCGCAGCATAAAGTGACGGAATTTATTGATGATATGGCGGCGGCGTATGCGTGGGCGGATGTCGTCGTTTGCCGCTCCGGTGCGTTAACGGTGAGTGAAATCGCCGCGGCAGGACTAc                                                                                                                                                                                                                           >  2:578969/1‑175 (MQ=255)                                                                                                                                                      cgCGGCAAAGANACGGAAAAAGCCGGTGGAAGAGG‑GTAGGGCGAAGGGGGGGGATCGCAGCATAAAGTGGAGGTATTTATTGATGGAATGGGGGCGGCGTAGGCGTGGGCGGATGGCGTAGGTTGCCGCTCCGGTGCGTTAACGGTGAGTGAAATCGCCGCGGCAGGACTACCGGCGTGGTTGGTGCCGGTTCAACATAAAGACCGCCAGCAATACTGGAATGCGCTACCGCTGGAAAAAGCGGGCGCAGCCAAAATTATCGAGCAGCCACAGCt                                                                                                                    <  2:52760/274‑1 (MQ=255)                                                                                                                                                       gCGGCAAAGGTTCGCAACAATCC‑GTTGAACAGGCGTATGCCGAAGCGGGGCAACCGCAGCATAAAGTGACGGAATTTATTGATGATATGGCGGCGGCGTATGCGTGGGCGGATGTCGTCGTTTGCCGCTCCGGTGCGTTAACGGTGAGTGAAATCGCCGCGGCAGGACTACCGGc                                                                                                                                                                                                                       <  1:578978/175‑1 (MQ=255)                                                                                                                                                                   cGGAACAATAC‑GTTGAACAGGCGTATGCCGAAGCGGGGCAACCGCAGCATAAAGTGACGGAATTTATTGATGATATGGCGGCGGCGTATGCNTGGGCGGATGTCGTCGtttgccgctctgatgccagatagtgactgaatcacccagtttcgcagcaacctgcggcattgtctggttaagaatgcgtgcgccctgagaaccacccactaccagcacacgaaccggaccttcacgtccagccaaaccctgctgctgcaacggcagcgccaacacat                                                                                                       >  1:488897‑M2/1‑108 (MQ=255)                                                                                                                                                                         aaTCC‑GTTGAACAGGCGTATGCCGAAGCGGGGCAACCGCAGCATAAAGTGACGGAATTTATTGATGATATGGCGGCGGCGTATGCGTGGGCGGATGTCGTCGtttgccgctctgatgccagatagtgactgaatcacccagtttcgcagcaacctgcggcattgtctggttaagaatgcgtgcgccctgagaaccacccactaccagcacaccaaccggaccttcacgtccagccaaacgctgctgcgcccccggcagcgcccaccccccctc                                                                                                   <  2:488890‑M2/273‑172 (MQ=255)                                                                                                                                                                         aaTCC‑GTTGAACAGGCGTATGCCGAAGCGGGGCAACCGCAGCATAAAGTGACGGAATTTATTGATGATATGGCGGCGGCGTATGCGTGGGCGGATGTCGTCGtttgccgctctgatgccagatagtgactgaatcacccagtttcgcagcaacctgcggcattgtctggttaagaatgcgtgcgccctgagaaccacccactaccag                                                                                                                                                                     <  1:712998‑M2/207‑106 (MQ=255)                                                                                                                                                                         aaTCC‑GTTGAACAGGCGTATGCCGAAGCGGGGCAACCGCAGCATAAAGTGACGGAATTTATTGATGATATGGCGGCGGCGTATGCGTGGGCGGATGTCGTCGtttgccgctctgatgccagatagtgactgaatcacccagtttcgcagcaacctgcggcattgt                                                                                                                                                                                                               <  2:698661‑M2/165‑64 (MQ=255)                                                                                                                                                                         aaTCC‑GTTGAACAGGCCTATGCCGAAGCGGGGCAACCGCAGCAGTAAGTGACGGAATTTATTGATGATATGGCGGCGGCGTATGCGTGGGCGGATGTCGTCGtttgccgctctgatgccagatagtgactgaatcacccagtttcgcagcaacctgctgcattggctggttaagaatgcgtgcnccctgagaaccacccact                                                                                                                                                                          <  1:513642‑M2/202‑101 (MQ=255)                                                                                                                                                                         aaTCC‑GTTGAACAGGAGTATGCCAAAGCGTGGCAACCGCAGCATAAAGTGACGGAATTTATTGATGATATGGCGGCGGCGTATGCGTGGGCGGATGTCGTCGtttgccgctctgatgccagatcgtgactgaatcacccagtttcgcagcaacctgcggcattgtctggttaagaatgcgtgcnccctgagaaccacccact                                                                                                                                                                          <  1:491988‑M2/202‑101 (MQ=255)                                                                                                                                                                         aaTCC‑GTTGAACAGACGTATGCCGAAGCAGGGCAACCGCAGCATAAAGTGACAGAATTTATTGATGATATGGTGGCGGCGTATGCGTGGGCGGATGTAGTCGtttgccgctctgaagacagatagtgactgaatcacccagtttcgcagcaacatgcggcatgga                                                                                                                                                                                                               <  1:538143‑M2/165‑64 (MQ=255)                                                                                                                                                                          aTCC‑GTTGAACAGGCGTATGCCGAAGCGGGGCAACCGCAGCATAAAGTGACGGAATTTATTGATGATATGGCGGCGGCGTATGCGTGGGCGGATGTCGTCGtttgccgctctgatgccagatagtgactgaatcacccagtttcgcagca                                                                                                                                                                                                                             <  2:605491‑M2/150‑50 (MQ=255)                                                                                                                                                                          aTCC‑GTTGAACAGGCGTATGCCGAAGCGGGGCAACCGCAGCATAAAGTGACGGAATTTATTGATGATATGGCGGCGGCGTATGCGTGGGCGGATGTCGTCGtttgccg                                                                                                                                                                                                                                                                       <  1:550123‑M2/108‑8 (MQ=255)                                                                                                                                                                          aTCC‑GGTGAAAAGNGGTATGCCGAAGCGGGGCAACCTCAGCATAAAGTGACGGAATTTATTTATGATATGGGGGGGGCGTATGCGTGGGCGGATGTCGTCGTTTGCCGCTCCGGTGCGTTAACGGTGAGTGAAATCGCCGCGGCAGGACTACCGGCGTTGTTTGTGCCGTTTCAACATAAAGACCGCCAGCAATACTGGAATGCGCTACCGCTGGAAAAAGCGGGCGCAGCCAAAATTATCGAGCAGCCACAGCTTAGCGTGGATGCTGTCGcc                                                                                                 <  2:523665/274‑1 (MQ=255)                                                                                                                                                                             c‑GTTGAACAGGCGTATGCCGAAGCGGGGCAACCGCAGCATAAAGTGACGGAATTTATTGATGATATGGCGGCGGCGTATGCGTGGGCGGATGTCGTCGtttgccgctctgatgccagatagtgactgaatcacccagtttcgcagcaacctgcggcattgtctggttaagaatgcgtgcgccctgagaaccacccactaccagcaca                                                                                                                                                                 >  2:712988‑M2/1‑98 (MQ=255)                                                                                                                                                                             c‑GTTGAACAGGCGTATGCCGAAGCGGGGCAACCGCAGCATAAAGTGACGGAATTTATTGATGATATGGCGGCGGCGTATGCGTGGGCGGATGTCGTCGtttgccgctctgatgccagatagtgactgaatcacccagtttcgcagcaacctgcggcattgtctgg                                                                                                                                                                                                           >  1:698670‑M2/1‑98 (MQ=255)                                                                                                                                                                               gTTGAACAGGCGTATGCCGAAGCGGGGCAACCGCAGCATAAAGTGACGGAATTTATTGATGATATGGCGGCGGCGTATGCGTGGGCGGATGTCGTCGtttgccgctctgatgccagatagtgactgaatcacccagtttcgcagcaacct                                                                                                                                                                                                                         >  1:605500‑M2/1‑97 (MQ=255)                                                                                                                                                                               gTTGAACAGGCGTATGCCGAAGCGGGGCAACCGCAGCATAAAGTGACGGAATTTATTGATGATATGGCGGCGGCGTATGCGTGGGCGGATGTCGTCGTTTGCCGCTcc                                                                                                                                                                                                                                                                   <  2:550114/108‑1 (MQ=255)                                                                                                                                                                                 tGAACAGGCGTATGCCGAAGCGGGGCAACCGCAGCATAAAGTGACGGAATTTATTGATGATATGGCGGCGGCGTATGCGTGGGCGGATGTCGTCGTTTGCCGCTCCGGTGCGTTAACGGTGAGTGAAATCGCCGCGGCAGGACTACCGGCGTTGTTTGTGCCg                                                                                                                                                                                                          >  1:71759/1‑163 (MQ=255)                                                                                                                                                                                     cAGGCGTATGCCGAAGCGGGGCAACCGCAGCATAAAGTGACGGAATTTATTGATGATATGGCGGCGGCGTATGCGTGGGCGGATGTCGTCGTTTGCCGCTCCGGTGCGTTAACGGTGAGTGAAATCGCCGCGGCAGGACTACCGGCGTTGTTTGTGCCGTTTc                                                                                                                                                                                                      <  2:71758/163‑1 (MQ=255)                                                                                                                                                                                      aGGCGTATGCCGAAGCGGGGCAACCGCAGCATAAAGTGACGGAATTTATTGATGATATGGCGGCGGCGTATGCGTGGGCGGATGTCGTCGTTTGCCGCTCCGGTGCGTTAACGGTGAGTGAAATCGCCGCGGCAGGACTACCGGCGTTGTTTGTGCCGTTTCAACATAAAGACCg                                                                                                                                                                                         >  1:337276/1‑175 (MQ=255)                                                                                                                                                                                        gCGTATGCCGAAGCGGGGCAACCGCAGCATAAAGTGACGGAATTTATTGATGATATGGCGGCGGCGTATGCGTGGGCGGATGTCGTCGtttgccgct                                                                                                                                                                                                                                                                     <  1:189145‑M2/97‑10 (MQ=255)                                                                                                                                                                                          gTATGCCGAAGCGGGGCAACCGCAGCATAAAGTGACGGAATTTATTGATGATATGGCGGCGGCGTATGCGTGGGCGGATGTCGTCGTTTGCCGCTCCGGTGCGTTAACGGTGAGTGAAATCGCCGCGGCAGGACTACCGGCGTTGTTTGTGCCGTTTCAACATAAAGACCGCCAg                                                                                                                                                                                     <  2:337270/175‑1 (MQ=255)                                                                                                                                                                                            aTGCCGAAGCGGGGCAACCGCAGCATAAAGTGACGGAATTTATTGATGATATGGCGGCGGCGTATGCGTGGGCGGATGTCGTCGTTTGCCGCTCCgg                                                                                                                                                                                                                                                                 <  2:189142/97‑1 (MQ=255)                                                                                                                                                                                                  aaGCGGGGCAACCGCAGCATAAAGTGACGGAATTTATTGATGATATGGCGGCTGCGTATGCGTGGGCGGATGTCGTCGtttgccgct                                                                                                                                                                                                                                                                     <  2:602216‑M2/87‑10 (MQ=255)                                                                                                                                                                                                  aaGCGGGGCAACCGCAGCATAAAGTGACGGAATTTATTGATGATATGGCGGCGGCGTATGCGTGGGCGGATGTCGTCGTTTGCCGCTCCGGTGCGTTAACGGTGAGTGAAATCGCCGCGGCAGGACTACCGGCGTTGTTTGTGCCGTTTCAACATAAAGACCGCCAGCAATACTGGAATGCGCTACCGCTGGAAAAAGCGGGCGCAGCCAAAATTATCGagca                                                                                                                             >  2:104537/1‑223 (MQ=255)                                                                                                                                                                                                  aaGCGGGGCAACCGCAGCATAAAGTGACGGAATTTATTGATGATATGGCGGCGGCGTATGCGTGGGCGGATGTCGTCGTTTGCCGCTCCGGTGCGTTAACGGTGAGTGAAATCGCCGCGGCAGGACTACCGGCGTTGTTTGTGCCGTTTCAACATAAAGACCGCCAGCAATACTGGAATGCGCTACCGCTGGAAAAAGCGGGCGCAGCCAAAATTATCGAGCAACCACAGCTTAGCGTGGATGCTGTCGCCAACACCCTGGCCGGGTGGTcgca                                                                          >  1:47476/1‑273 (MQ=255)                                                                                                                                                                                                      ggggCAACCGCAGCATAAAGTGACGGAATTTATTGATGATATGGCGGCGGCGTATGCGTGGGCGGATGTCGTCGTTTGCCGCTCCgg                                                                                                                                                                                                                                                                 <  1:602225/87‑1 (MQ=255)                                                                                                                                                                                                      ggggCAACCGCAGCATAAAGTGACGGAATTTATTGATGATATGGCGGCGGCGTATGCGTGGGCGGATGTCGTCGTTTGCCGCTCCGGTGCGTTAACTGTGAGTGAAATCGCCGCGGCAGGACTACCGGCGTTGTTTGTGCCGTTTCAACATAAAGACCGCCAGCAATACTGGAATGCGCTACCGCTGGAAAAAGCGGGCGCAGCCAAAATTATCGAGCAGCCACAGCTTAGCGTGGATGCTGTCGCCAACACCCTGGCCGGGTGGTCGCgagga                                                                      <  1:404955/274‑3 (MQ=255)                                                                                                                                                                                                      ggggCAACCGCAGCATAAAGTGACGGAATTTATTGATGATATGGCGGCGGCGTATGCGTGGGCGGATGTCGTCGTTTGCCGCTCCGGTGCGTTAACGGTGAGTGAAATCGCCGCGGCAGGACTACCGGCGTTGTTTGTGCCGTTTCAACATAAAGACCGCCAGCAATACTGGAATGCGCTACCGCTGGAAAAAGCGGGCGCAGCCAAAATTATCGAGCAGCca                                                                                                                         <  1:104538/223‑1 (MQ=255)                                                                                                                                                                                                       ggggaacctggggaTAAAGGGATGGCTTTTATGGTTGCTATGGCGGTGGCGTGTTGGTGGGCGGATGTCGTCGTTTGCCGCTCCGGTGGGTTAACGGTGAGTGAAATCGCCGCGGCAGGACTACCGGCTTTGTTTGTGCCGTTTCAACATAAAGACCGCCAGCAATACTGGAATGCGCTACCGCTGGAAAAAGCGGGCGCAGCCAAAATTATCGAGCAGCCACAGCTTAGCGTGGATGCTGTCGCCAACACCCTGGCCGGGTGGTCGCGAGaaa                                                                     <  2:641928/261‑1 (MQ=255)                                                                                                                                                                                                                  gcaTAAAGTGACGGAATTTATTGATGATATGGCGGCGGCGTATGCGTGGGCGGATGTCGTCGTTTGCCGCTCCGGTGCGTTAACGGTGAGTGAAATCGCcgcg                                                                                                                                                                                                                                     >  2:188836/1‑103 (MQ=255)                                                                                                                                                                                                                      aaaGTGACGGAATTTATTGATGATATGGCGGCGGCGTATGCGTGGGCGGATGTCGTCGTTTGCCGCTCCGGTGCGTTAACGGTGAGTGAAATCGCCGCGGCAg                                                                                                                                                                                                                                 <  1:188839/103‑1 (MQ=255)                                                                                                                                                                                                                       taGTGACTGAATTTATTGATGATATGGCGGCGGCGTATGCGTGGGCGGATGTCGTCGTTTGCCGCTCCGGTGCGtt                                                                                                                                                                                                                                                           >  2:661260/2‑76 (MQ=255)                                                                                                                                                                                                                           gACTGAATTTATTGATGATATGGCGGCGGCGTATGCGTGGGCGGATGTCGTCGTTTGCCGCTCCGGTGCGTTAACg                                                                                                                                                                                                                                                       <  1:661269/76‑1 (MQ=255)                                                                                                                                                                                                                             cGGAATTTATTGATGATATGGCGGCGGCGTATGCGTGGGCGGATGTCGTCGTTTGCCGCTCCGGTGCGtt                                                                                                                                                                                                                                                           >  1:278114/1‑70 (MQ=255)                                                                                                                                                                                                                             cGGAATTTATTGATGATATGGCGGCGGCGTATGCGTGGGCGGATGTCGTCGTTTGCCGCTCCGGTGCGTTAACGGTGAGTGaaa                                                                                                                                                                                                                                             >  2:444557/1‑84 (MQ=255)                                                                                                                                                                                                                             cGGAATTTATTGATGATATGGCGGCGGCGTATGCGTGGGCGGATGTCGTCGTTTGCCGCTCCGGTGCGTTAACGGTGAGTGAAATCGCCGCGGCAGGACTACCGGCGttgttt                                                                                                                                                                                                                >  2:177693/1‑113 (MQ=255)                                                                                                                                                                                                                                 aTTTATTGATGATATGGCGGCGGCGTATGCGTGGGCGGATGTCGTCGTTTGCCGCTCCGGTGCGTTAACg                                                                                                                                                                                                                                                       <  2:278109/70‑1 (MQ=255)                                                                                                                                                                                                                                 aTTTATTGATGATATGGCGGCGGCGTATGCGTGGGCGGATGTCGTCGTTTGCCGCTCCGGTGCGTTAACGGTGAGTGAAATcgc                                                                                                                                                                                                                                         <  1:444564/84‑1 (MQ=255)                                                                                                                                                                                                                                 aTTTATTGATGATATGGCGGCGGCGTATGCGTGGGCGGATGTCGTCGTTTGCCGCTCCGGTGCGTTAACGGTGAGTGAAATCGCCGCGGCAGGACTACCGGCGTTGTTTGTGc                                                                                                                                                                                                            <  1:177696/113‑1 (MQ=255)                                                                                                                                                                                                                                  tttATTGATGATATGGCGGCGGCGTATGCGTGGGCGGATGTCGTCGTTTGCCGCTCCGGTGCGTTAACGGTGAGTGAAATCGCCGCGGCAGGACTACCGGCGTTGTTTGTGCCGTTTCAACATAAAGACCg                                                                                                                                                                                         >  2:238550/1‑131 (MQ=255)                                                                                                                                                                                                                                  tttATTGATGATATGGCGGCGGCGTATGCGTGGGCGGATGTCGTCGTTTGCCGCTCCGGTGCGTTAACGGTGAGTGAAATCGCCGCGGCAGGACTACCGGCGTTGTTTGTGCCGTTTCAACATAAAGACCGCCAGCAATACTGGAATGCGCTACCGCTGGAAAAAGCGGGCGCAGCCAAAATTATCAAGCCGCCACAGCTTAGCGTGGATGCTGTCTCCAACACCCTGGCCGGGGAGTGGCGAGAAACCTTCTTAACCACGGccanccgccgccg                                         >  2:278842/1‑263 (MQ=255)                                                                                                                                                                                                                                    tATTGATGATATGGCGGCGGCGTATGCGTGGGCGGATGTCGTCGTTTGCCGCTCCGGTGCGTTAACGGTGAGTGAAATCGCCGCGGCAGGACTACCGGCGTTGTTTGTGcc                                                                                                                                                                                                           >  1:573528/1‑111 (MQ=255)                                                                                                                                                                                                                                      ttGATGATATGGCGGCGGCGTATGCGTGGGCGGATGTCGTCGTTTGCCGCTCCGGTGCGTTAACGGTGAGTGAAATCGCCGCGGCAGGACTACCGGCGTTGTTTGTGCCGTTTCAACATAAAGACCGCCAg                                                                                                                                                                                     <  1:238555/131‑1 (MQ=255)                                                                                                                                                                                                                                        gatgatATGGCGGCGGCGTATGCGTGGGCGGATGTCGTCGtttgccg                                                                                                                                                                                                                                                                       <  1:616500‑M2/47‑8 (MQ=255)                                                                                                                                                                                                                                        gatgatATGGCGGCGGCGTATGCGTGGGCGGATGTCGTCGTTTGCCGCTCCGGTGCGTTAACGGTGAGTGAAATCGCCGCGGCAGGACTACCGGCGTTGTTTGTGCCGttt                                                                                                                                                                                                       <  2:573519/111‑1 (MQ=255)                                                                                                                                                                                                                                         gtggggggggggcggcgTATGCGTGGGCGGATGTCGTCGTTTGCCGCGGCGGTGCGGTAACGGTGAGTGAAATCGCCGAGGCAGGACTACCGGCGTTGTTTGTGCCGTTTCAACATAAAGACCGCCAGCAATACTGGAATGCGCTACCGCTGGAAAAAGCGGGCGCAGCCAAAATTATCGAGCAGCCACAGCTTAGCGTGGATGCTGTCGCCAACACCCTGGCCGGGTGGTCGCGAGAAACCTTATTAACCATGGCAGAAC‑GCGCCCGCGCTGc                                  <  2:656818/264‑1 (MQ=255)                                                                                                                                                                                                                                            atatGGCGGCGGCGTATGCGTGGGCGGATGTCGTCGTTTGCCGCTcc                                                                                                                                                                                                                                                                   <  2:616491/47‑1 (MQ=255)                                                                                                                                                                                                                                              atGGCGGCGGCGTATGCGTGGGCGGATGTCGTCGTTTGCCGCTCCGGTGCGTTAACGGTGAGTGAAATCGCCGCGGCAGGACTACCGGCGTTGTTTGTGCCGTTTCAACATAAAGACCGCCAGCAATACTGGAATGCGCTACCGCTGGAAAAAGCGGGCGCAGCCAAAATTATCGAGCAGCCACAGCTTAGCGTGGATGCTGTCGCCAACCCCCTGGCCGGGTGGGCGCGAGAAACCTTATTACCCATGG‑ACAACAGCCCCCGCGCTGCCTCCa                             >  2:676344/1‑274 (MQ=255)                                                                                                                                                                                                                                                       gcgTATGCGTGGGCGGATGTCGTCGTTTGGCGCTCCGGTGCGTTAACGGTGAGTGAAATTGCCGCGGCAGGACTACCGGCGTTGTTTGTGCCGTTTCAACATAAAGACCGCCAGCAATATTGGAATGCGCTACCGCTGGAAAAAGCGGGCGCAGCCAAAATTATCGAGCAGCCACAGCTTAGCNTGGATGCTGTCGCCAACACCCTGGCCGGGTGGTCGCGAGAAACCTTATTAACCATGGCAGAAC‑GCGCCCGCGCTGCATCCATTCCGGATg                    >  1:507157/1‑274 (MQ=255)                                                                                                                                                                                                                                                       gcgTATGCGTGGGCGGATGTCGTCGTTTGCCGCTCCGGTGCGTTAACGGTGAGTGAAATCGCCGCGGCAGGACTACCGGCGTTGTTTGTGCCGTTTCAACATAAAGACCGCCAGCAATACTGGAATGCGCTACCGCTGGAAAAAGCGGGCGCa                                                                                                                                              >  1:117234/1‑153 (MQ=255)                                                                                                                                                                                                                                                           aTGCGTGGGCGGATGTCGTCGTTTGCCGCTCCGGTGCGTTAACGGTGAGTGAAATCGCCGCGGCAGGACTACCGGCGTTGTTTGTGCCGTTTCAACATAAAGACCGCCAGCAATACTGGAATGCGCTACCGCTGGAAAAAGCGGGCGCAGCCa                                                                                                                                          <  2:117233/153‑1 (MQ=255)                                                                                                                                                                                                                                                                       aTGTCGTCGTTTGCCGCTCCGGTGCGTTAACGGTGAGTGAAATCGCCGCGGCAGGACTACCGGCGTTGTTTGTGCCGTTTCAACATAAAGACCGCCAGCAATACTGGAATGCGCTACCGCTGGAAAAAGCGGGCGCAGCCAAAATTATCGAGCAGCCACAGCTTAGCGTGGATGCTGTCGCCAACACCCTGGCCGGGTGGTCGCGAGAAACCTTATTAACCATGGCAGAAC‑GCGCCCGCGCTGCATCCATTCCGGATGCCACCGAGCGAGTGGCa   >  1:195115/1‑275 (MQ=255)                                                                                                                                                                                                                                                                        tGTCGTCGTTTGCCGCTCCGGTGCGTTAACGGTGAGTGAAATCGCCGCGGCAGGACTACCGGCGTTGTTTGTGCCGTTTCAACATAAAGACCGCCAGCAATACTGGAATGCGCTACCGCTGGAAAAAGCGGGCGCAGCCAAAATTATCGAGCAGCCACAGCTTAGCGTGGATGCTGTCGCCAACACCCTGGCCGGGTGGTCGCGAGAAACCTTATTAACCATGGAAGAAC‑GCGCCCGCGCAGCATCCATTCCGGATGCCACCGAGCGAGAGGCaa  >  1:99457/1‑275 (MQ=255)                                                                                                                                                                                                                                                                         gtcgtcGTTTGCCGCTCCGGTGCGTTAACGGTGAGTGAAATCGCCGCGGCAGGACTACCGGCGTTGTTTGTGCCGTTTGAACATAAAGACCGCCAGCAATACTGGAATGCGCTACCGCTGGTAAAAGCGGGCGCAGCCAAAATTATCGAGCAGCCACAGCTTAGCGTGGATGCTGTCGCCAACACCCTGGCCGGGTGGTCGCGAGAAACCTTATTAACCATGGCAGGAC‑GCGCCCGCGCTGCATCCATTCCGGATGCCACCGAGCGAGTGGCaa  <  1:676353/274‑1 (MQ=255)                                                                                                                                                                                                                                                                             tcgtTTGCCGCTCCGGTGCGTTAACGGTGAGTGAAATCGCCGCGGCAGGACTACCGGCGTTGTTTGTGCCGTTTCAACATAAAGACCGCCAGCAATACTGGAATGCGCTACCGCTGGAAAAAGCGGGCGCAGCCAAAATTATCGAGCAGCCACAGCTTAGCGTGGATGCTGTCGCCAACACCCTGGCCGGGTGGTCGCGAGAAAc                                                                    >  2:37679/1‑205 (MQ=255)                                                                                                                                                                                                                                                                               |                                                                                                                                                                                                                                                                             CGCTGCCGTTGCCGCAGCAACGTTTGGCTGGACGTGAAGGTCCGGTTCGTGTGCTGGTAGTGGGTGGTTCTCAGGGCGCACGCATTCTTAACCAGACAATGCCGCAGGTTGCTGCGAAACTGGGTGATTCAGTCACTATCTGGCATCAGAGCGGCAAAGGTTCGCAACAATCC‑GTTGAACAGGCGTATGCCGAAGCGGGGCAACCGCAGCATAAAGTGACGGAATTTATTGATGATATGGCGGCGGCGTATGCGTGGGCGGATGTCGTCGTTTGCCGCTCCGGTGCGTTAACGGTGAGTGAAATCGCCGCGGCAGGACTACCGGCGTTGTTTGTGCCGTTTCAACATAAAGACCGCCAGCAATACTGGAATGCGCTACCGCTGGAAAAAGCGGGCGCAGCCAAAATTATCGAGCAGCCACAGCTTAGCGTGGATGCTGTCGCCAACACCCTGGCCGGGTGGTCGCGAGAAACCTTATTAACCATGGCAGAAC‑GCGCCCGCGCTGCATCCATTCCGGATGCCACCGAGCGAGTGGCAA  >  CP009273/96633‑97169

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.