New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP009273	= 113555	57 (1.480)	6 (0.170)	5/296	NT	10.3%	coding (32/1386 nt)	hofB	T2SE secretion family protein; P‑loop ATPase superfamily protein
	?	CP009273	= 113694	51 (1.410)					coding (343/441 nt)	ppdD	putative prepilin peptidase‑dependent pilin

GACGCGCGTTGTTCCAGCGCAGATTGTAACGTTCGAGTTAGCAACTCTGCTTTGGGCTGATGCTTCTCCTGAACAGCTACGGGCAATGTCTGTTGTGTGCGACTGGCGTGACCTTCCATTTGTTGGCGCGTCCAGCAGGTGATCTCAATACGTTTGGTGGTAGCGAAATGCAATGCGTCCAGTAGCTCATGCGAAGGTGCATCGACTACCGCAACATGAACCACCTCTTCGCTGGCATCCAGCAAGACTCCATGATAACGCAGACACAGGGCAGTGAGCTGTGGAATATTCATTGCCGCTCCTTAGTTGGCGTCATCAAAGCGGAAGACATCTTCGCAGGCTTGCTGCAATGCGCTGTCACTTTGAATATTGCAGTTGCGCGTCCAGCCGGTGACGCCGTTTGCGTTATCCCAACCCGGTGTCATGACGACGCTTAGCCCATTGAGACTTTCTTGCCCGGTCAGCGACACCACGCCCTTTGCCACACTCATGGCTGAAACATAGCGGGTGGTGGTAGGCGAGGGAATGCCATT  >  CP009273/113294‑113826                                                                                                                                                                                                                                                                      |                                                                                                                                                                                                                                                                                gACGCGCGTTGTTCCAGCGCAGATTGTAACGTTCGAGTTAGCAACTCTGCTTTGGGCTGATGCTTCTCCTGAACAGCTACGGGCAATGTCTGTTGTGTGCGACTGGCGTGACCTTCCATTTGTTGGCGCGTCCAGCAGGTGATCTCAATACGTTTGGTGGTAGCGAAATGCAATGCGTCCAGTAGCTCATGCGAAGGTGCATCGACTACCGCAACATGAACCACCTCTTCGCTGGCAACAAGAAAGACTCCATGATAACGCAGACACAGGGCAg                                                                                                                                                                                                                                                                     >  2:191688/1‑274 (MQ=255)  aCGCGCGTTGTTCCAGCGCAGATTGTAACGTTCGAGTTAGCAACTCTGCTTTGGGCTGATGCTTCTCCTGAACAGCTACGGGCAATGTCTGTTGTGTGCGACTGGCGTGACCTTCCATTTGTTGGCGCGTCCAGCAGGTGATCTCAATACGTTTGGTGGTAGCGAAATGCAATGCGTCCAGTAGCTCATGCGAAGGTGCATCGACTACCGCAACATGAACCACCTCTTCGCTGGCATCCAGCAAGACTCCATGATAACGCAGACACAGGGCAGTg                                                                                                                                                                                                                                                                   <  1:155017/275‑1 (MQ=255)    gcgcgTTGTTCCAGCGCAGATTGTAACGTTCGATTTAGCAACTCTGCTTTGGGCTGATGCTTCTCCTGAACAGCTACGGGCAATGTCTGTTGTGTGCGACTGGCGTGACCTTCCATTTGTTGGCGCGTCCAGCAGGTGATCTCAATACGTTTGGTGGTAGCGAAATGCAATGCGTCCAGTAGCTCATGCGAAGGTGCATCGACTACCGCAACATGAACCACCTCTTCGCTGGCATCCAGCAAGACTCCATGATAACGCAGACACAGGGCAGTGAg                                                                                                                                                                                                                                                                 <  1:191691/275‑1 (MQ=255)           gttCCAGCGCAGATTGTTACGTTCGAGTTAGCAACTCTGCTTTGGGCTGATGCTTCTCCTGAACAGCTACGGGCAATGTCTGNTGTGTGCGNCTTGCGTGACCTGCCATTTGTTGGCGCGTCCAGCAGGTGATCTCAATACGTTTGGTGGTAGCGAAATGCAATGCGTCCAGTAGCTCATGCGAAGGTGCATCGACTACCGCAACATGAACCACCTCTTCGCTGGCATCCAGCAAGACTCTATGATAACGCAGACACAGGGCAGTGAGCTGTGGa                                                                                                                                                                                                                                                          <  1:474238/275‑1 (MQ=255)                        ttGTGACGTNCGAGTTAGCACCTCTGCTTTGTGCTGATGCTTCTCCTGAACATCTACGGGCAATGTCTGTTGTGTGCGACTGGCGTGACCTTCCATTTGTTGGCGCGTCCAGCAGGTGATCTCAATACGTTTGGTGGTAGCGAAATGCAATGCGTCCAGTAGCTCATGCGAAGGTGCATCGACTACCGCAACATGAACCACCTCTTCGCTGGCATCCAGCAAGACTCCATGATAACGCAGACACAGGGCAGTGAGCTGTGGAATATTCATTGCCg                                                                                                                                                                                                                                             <  2:276810/275‑1 (MQ=255)                                          cAACTCTGCTTTGGGCTGATGCTTCTCCTGAACAGCTACGGGCAATGGCTGTTGTGTGCGACTGGCGTGACCTTCCATTTGTTGGCGCGTCCAGCAGGTGATCTCAATACGTTTGGTGGTAGCGAAATGCAATGCGTCCAGTAGCTCATGCGAAGGTGCATCGACTACCGAAACATCAAACACCTCGTCGCTGGCATCCAGCAAGACTCCAGGATAACGCAGACAAAAGACAAGGAGCTGTGGAATAATAAATGCAGCTAATTAGTTAGCGtcaa                                                                                                                                                                                                                           >  1:685984/1‑274 (MQ=255)                                                            aTGCTTCTCCTGAACAGCTACGGGCAATGTCTGTTGTGTGCGACTGGCGTGACCTTCCATTTGTTGGCGCGTCCAGCAGGTGATCTCAATACGTTTGGTGGTAGCGAAATGCAATGCGTCCAGTAGCTCATGCGAAGGTGCATCGACTACCGCAACATGAACCACCTCTTCGCTGGCATCCAGCAAGACTCCATGATAACGCAaacggcgtcaccggctggccgcgcaactgcaatattcaaagtgacagcgcattgcagcaagcctgcgaagat                                                                                                                                                                                                         >  1:121780‑M1/1‑203 (MQ=255)                                                            aTGCTTCTCCTGAACAGCTACGGGCAATGTCTGTTGTGTGCGACTGGCGTGACCTTCCATTTGTTGGCGCGTCCAGCAGGTGATCTCAATACGTTTGGTGGTAGCGAAATGCAATGCGTCCAGTAGCTCATGCGAAGGTGCATCGACTACCGCAACATGAACCACCTCTTCGCTGGCATCCAGCAAGACTCCATGATAACGCAGACACAg                                                                                                                                                                                                                                                                          >  2:345046/1‑210 (MQ=255)                                                                ttCTCCTGAACAGCTACGGGCAATGTCTGTTGTGTGCGACTGGCGTGACCTTCCATTTGTTGGCGCGTCCAGCAGGTGATCTCAATACGTTTGGTGGTAGCGAAATGCAATGCGTCCAGTAGCTCATGCGAAGGTGCATCGACTACCGCAACATGAACCACCTCTTCGCTGGCATCCAGCAAGACTCCATGATAACGCAGACACAGGGCa                                                                                                                                                                                                                                                                      <  1:345052/210‑1 (MQ=255)                                                                             cTACGGGCAATGTCTGTTGTGTGCGACTGGCGTGACCTTCCATTTGTTGGCGCGTCCAGCAGGTGATCTCAATACGTTTGGTGGTAGCGAAATGCAATGCGTCCAGTAGCTCATGCGAAGGTGCATCGACTACCGCAACATGAACCACCTCTTCGCTGGCATCCAGCAAGACTCCATGATAACGCAGACACAGGGCAGTGAGCTGTGGAATATTCAtt                                                                                                                                                                                                                                                 >  1:330290/1‑218 (MQ=255)                                                                               aCGGGCAATGTCTGTTATGTGCGACTGGAGTGACCTTCCATTTGCTGGCGCGTCCAGCAGGTGATCTCAATACGTTTGGTGGTAGCGAAATGCAATGCGTCCAGTAGCTCATGCGAAGGTGCATCGACTACCGCAACATGAACCACCTCTTCGCTGGCATCCAGCAAGACTCCATGATAACGCNGACACAGGGCAGTGAGCTGTGGAATATTCATTGCCGCTCCTTAGTTGGCGTCATCAAAGCGGAAGACATCTTCGCAGGCTAGCTGCAATgc                                                                                                                                                                                      >  1:526209/1‑275 (MQ=255)                                                                                 gggCAATGTCTGTTGTGTGCGACTGGCGTGACCTTCCATTTGTTGGCGCGTCCAGCAGGTGATCTCAATACGTTTGGTGGTAGCGAAATGCAATGCGTCCAGTAGCTCATGCGAAGGTGCATCGACTACCGCAACATGAACCACCTCTTCGCTGGCATCCAGCAAGACTCCATGATAACGCAGACACAGGGCAGTGAGCTGTGGAATATTCATTGCCGCTCCTTAGTTGGCGTAATCAAAGCGGAAGACATCTTCGCAGGCTtgctgc                                                                                                                                                                                           <  1:449325/268‑1 (MQ=255)                                                                                    acttgtcTGTTGGGTGCGACTGGTGTGACCTTCCATTTGTTGGCGCGTCCAGCAGGTGATCTCAATACGTTTGGTGGTAGCGAAATGCAATGCGTCCAGTAGCTCATGCGAAGGTGCATCGACTACCGCAACATGAACCACCTCTTCGCTGGCATCCAGCAAGACTCCATGATAACGCAaacggcgtcaccggctggacgcgcaactgcaatattcaaagtgacagcgcattgcagcaagcctgcgaagatgtcttccgctttgatgacgccaac                                                                                                                                                                                 <  2:184379‑M1/272‑97 (MQ=255)                                                                                       tGTCTGTTGTGTGCGACTGGCGTGACCTACCATTTGTTGGCGCGTCCAGCAGGTGATCTCAATACGTTTGGTGGTAGCGAAATGCAATGCGTCCAGTAGCTCATGCGAAGGTGCATCGACTACCGCAACATGAACCACCTCTTCGCTGGCATCCAGCAAGACTCCATGATAACGCAGACACAGNGCAGTGAGCTGTGGAATATTCATTGCCGCTCCTTAGTTGGCGTAATCAAAGCGGAAGACATCTTCACAGGCTTACTGCAATGCGCTGTCAc                                                                                                                                                                              >  1:522554/1‑275 (MQ=255)                                                                                       tGTCTGTTGTGTGCGACTGGCGTGACATTCCATTTGTTGGCGCGTCCAGCAGGTGATCTCAATACGTTTGGTGGTAGCGAAATGCAATGCGTCCAGTAGCTCATGCGAAGGTGCATCGACTACCGCAACATGAACCACCTCTTCGCTGGCATCCAGCAAGACTCCATGATGACGCAGACACAGNGCAGTGAGNTGTGGAATATTCATTGACGCTCCTTAGTGGGCGTCATCAAAGCAGAAGACATCTTCTCAAGCTTGATGCAAAGCTCTGTCAc                                                                                                                                                                              >  1:468351/1‑275 (MQ=255)                                                                                               gtgtgCGACTGGCGTGACCTTCCATTTGTTGGCGCGTCCAGCAGGTGATCTCAATACGTTTGGTGGTAGCGAAATGCAATGCGTCCAGTAGCTCATGCGAAGGTGCATCGACTACCGCAACATGAACCACCTCTTCGCTGGCATCCAGCAAGACTCCATGATAACGCAGa                                                                                                                                                                                                                                                                               >  1:601294/1‑170 (MQ=255)                                                                                                  tgCGACTGGCGTGACCTTCCATTTGTTGGCGCGTCCAGCAGGTGATCTCAATACGTTTGGTGGTAGCGAAATGCAATGCGTCCAGTAGCTCATGCGAAGGTGCATCGACTACCGCAACATGAACCACCTCTTCGCTGGCATCCAGCAAGACTCCATGATAACGCAGACACAGGGCAGTGAGCtg                                                                                                                                                                                                                                                              >  2:409768/1‑184 (MQ=255)                                                                                                   gCGACTGGCGTGACCTTCCATTTGTTGGCGCGTCCAGCAGGTGATCTCAATACGTTTGGTGGTAGCGAAATGCAATGCGTCCAGTAGCTCATGCGAAGGTGCATCGACTACCGCAACATGAACCACCTCTTCGCTGGCATCCAGCAAGACTCCATGATAACGCAGAcaca                                                                                                                                                                                                                                                                           <  2:601285/170‑1 (MQ=255)                                                                                                      aCTGGCGTGACCTTCCATTTGTTGGCGCGTCCAGCAGGTGATCTCAATACGTTTGGTGGTAGCGAAATGCAATGCGTCCAGTAGCTCATGCGAAGGTGCATCGACTACCGCAACATGAACCACCTCTTCGCTGGCATCCAGCAAGACTCCATGATAACGCAGACACAGGGCAGTGAGCTGTGGa                                                                                                                                                                                                                                                          <  1:409775/184‑1 (MQ=255)                                                                                                       cTGGCGTGACCTTCCATTTGTTGGCGCGTCCAGCAGGTGATCTCAATACGTTTGGTGGTAGCGAAATGCAATGCGTCCAGTAGCTCATGCGAAGGTGCATCGACTACCGCAACATGAACCACCTCTTCGCTGGCATCCAGCAAGACTCCATGATAACGCAGACACAGGGCAGTGAGCTGTGGAATATTCATTGCCGCTCCTTCGTTGGCGTAATCAAAGCGGAAGACATCTTCGCAGGCTTGCTGCAATCCGCTGTCACTTTGAATATTGCAGtt                                                                                                                                                              >  1:284204/1‑275 (MQ=255)                                                                                                          gCGTGACCTTCCATTTGTTGGCGCGTCCAGCAGGTGATCTCAATACGTTTGGTGGTAGCGAAATGCAATGCGTCCAGTAGCTCATGCGAAGGTGCATCGACTACCGCAACATGAACCACCTCTTCGCTGGCATCCAGCAAGACTCCATGATAACGCAGACACAGGGCAGTGAGCTGTGGAATATTCAt                                                                                                                                                                                                                                                  >  1:468978/1‑188 (MQ=255)                                                                                                              gACCTTCCATTTGTTGGCGCGTCCAGCAGGTGATCTCAATACGTTTGGTGGTAGCGAAATGCAATGCGTCCAGTAGCTCATGCGAAGGTGCATCGACTACCGCAACATGAACCACCTCTTCGCTGGCATCCAGCAAGACTCCATGATAACGCAGACACAGGGCAGTGAGCTGTGGAATATTCATTGcc                                                                                                                                                                                                                                              <  2:468971/188‑1 (MQ=255)                                                                                                                   tCCATTTGTTGGCGCGTCCTGCAGGTGATCTCAATACGTTTGGTGGTATCGAAATGCAATGCGTCCAGTAGCTCAAGCGAAGGTGCATCGACTACCGGAACATGAACCACCTTTTCGCTGGCATCCAGCAAGACTCCAGGATACCGCAGACACAGGGCAGTGAGCTGTGGAATATTCATTGCCGCTCCTTAGTTGGCGTCATCAAAGCGGAAGACATCTTCGCAGGCTTGCTGCAATGCGCTGTCACTTTGAATATTGCAGTTGCGCGTCCAGc                                                                                                                                                   <  1:269725/274‑1 (MQ=255)                                                                                                                     cgggggttggcgcgTCCAGTAGGTGATCTAAATAAGTGGGGTTGTAGCGAAATGCAATGAGTCCAGTAGCTCAGGCGAAGGTGCAGCGACTACCGAAACATGAACCACCTCGTCGCGGGAATCCAGCAAGACTCCATGATAACGCAaacggcgtcaccggctggacgcgcaactgcaatattcaaagtgacagcgcattgcagcaagcctgcgaagatgtcttccgctttgatgacgccaactaaggagcggcaatgaatattccacagctcac                                                                                                                                                 <  1:48538‑M1/269‑129 (MQ=255)                                                                                                                     cgcgtcttggcgcgtCCCGCCGGTGATCCCAATTCGTTTTGTGGTAGCGCAAGTCAAGGCGGCCAGTAGCTCATGCGAAGGTGCCTCGACTACCGGAACATGCACCACCTCTTGCCTGGCAGCCAGCAAGACTCCATGATAACGCAaacggcgtcaccggctgggagcgcaactgcaatatgcaaagtgacagcgcaatgcagcaagcctgcgaagatgtcttccgctttgatgacgccaactaaggagcggcaatgaatattccacagctcac                                                                                                                                                 <  2:121779‑M1/268‑129 (MQ=255)                                                                                                                     cATTTGTTGGCGCGTCCAGCAGGTGATCTAAAACCGATTGGAGGTAGCGAAATGAAATGCGTCCAGTAGGTCATTCGAAGGTGCATCGACTACCGCAACATGAACCACCTCTTCGCTGGAATCCACCAAGACTCCATGATAACGCAAACACAGGGCAGTGAGCTGTGGCATATTGATTACCGCTCCTCAGTTGGCGTCATCAAATCGGAAGAAATCTTAGCAGGATTTCTGCAATGCGCTGTCACTTTGAATATTGCAGTTGCGCGTccctcc                                                                                                                                                  >  2:682332/1‑269 (MQ=255)                                                                                                                              gcgcGTCCAGCAGGTGATCTCAATACGTTTGGTGGTAGCGAAATGCAATGCGTCCAGTAGCTCATGCGAAGGTGCATCGACTACCGCAACATGAACCACCTCTTCGCTGGCATCCAGCAAGACTCCATGATAACGCAGACACAGGGCAGTGAGCTGTGGAATATTCATTGCCGCTCCTTAGTTGGCGTCATCAAAGCGGAAGACATCTTCGCAGGCTTGCTGCAATGCGCTGTCACTTTGAATATTGCAGTTGCGCGTCCAGCCGGTGACGCCg                                                                                                                                        >  1:236096/1‑274 (MQ=255)                                                                                                                                   tCCAGCAGGTGATCTCAATACGTTTGGTGGTAGCGAAATGCAATGCGTCCAGTAGCTCATGCGAAGGTGCATCGACTACCGCAACATGAACCACCTCTTCGCTGGCATCCAGCAAGACTCCATGATAACGCAGACACAGGGCAGTGAGCCTTGGAATATTCATTGCCGCTCCTTAGTTGGCGTCATCAAAGCGGAAGACATCTTCGCAGGCTTGCTGCAATGCGCTGTCACTTTGAATATTGCAGTTGCGCGTCAAGCCGGTGACGCCGTTtgcg                                                                                                                                  <  1:580987‑M2/275‑5 (MQ=255)                                                                                                                                   accgtcaagggatctcaatgcTTTTGGTGGTAGCGAAATGCAATGCGTCACGTAGCGCATGCGAAGGTGCATCGACTACCGCAACATGAACCACCTCTTCGCTGGCATCCAGCAAGACTCCATGATAACGCAGACACAGGGCAGTGAGCTGTGGAATATTCATTGCCGCTCCTTAGTTGGCGTCATCAAAGCGGAAGACATCTTCGCAGGCTTGCTGCAATGCGCTGTCACTTTGAATATTGCAGTTGCGCGTCCAGCCGGTGACGCCGTTtgcg                                                                                                                                  >  2:284199‑M2/11‑271 (MQ=255)                                                                                                                                                atcAATACGTGTGGTGTGAGCGAAATGCAATGCGTCCAGTAGCTCATGCGAAAGTGCATCGACTACCGAAACATGAACCACCTCTGCGCTGGCATCCAGCAAGACGCCATGATAACGCAGACACAGGGCAGTGAGCTGTGGAATATTCATTGCCGCTCCTTAGTTGGCGTCATCAAAGCGGAAGACATCTTCGCAGGCTTGCTGCAATGCGCTGTCACTTTGAATATTGCATTTGCGCGTCCAGCCGGTGAGGCCGTTTGCGTTATCCCAACCCg                                                                                                                     <  2:236091/274‑1 (MQ=255)                                                                                                                                                  cAATACGTTTGGTGGTAGCGAAATGCAATGCGTCCAGTAGCTCATGCGAAGGTGCATCGACTACCGCAACATGAACCACCTCTTCGCTGGCATCCAGCAAGACTCCATGATAACGCAGACACAg                                                                                                                                                                                                                                                                          >  1:457475/1‑124 (MQ=255)                                                                                                                                                    agaCGTTTGGTGGTAGCGAAATGCAATGCTTCCAGTAGCTCATGCGAAGGTGCATCGACTACCGCAACATGAACCACCTCTTCGCTGGCATNCAGCAAGACTCCATGATAACGCAGACACAGGGCAGTGAGCTGTGGAATATTCATTGCCGCTCCTTAGTTGGCGTCATCAAAGCGGAAGACATCTTCGCAGGCTTGCTGCAATGCGCTGTCACTTTGAATATTGCAGTTGCGCGTCCAGCCGGTCTCGCCGTTTGCGTGATCCCAACCCGgtgt                                                                                                                 <  1:493358/273‑1 (MQ=255)                                                                                                                                                      aCGTTTGGTGGTAGCGAAATGCAATGCGTCCAGTAGCTCATGCGAAGGTGCATCGACTACCGCAACATGAACCACCTCTTCGCTGGCATCCAGCAAGACTCCATGATAACGCAGACACAGGGCa                                                                                                                                                                                                                                                                      <  2:457468/124‑1 (MQ=255)                                                                                                                                                         tttGGTGGTAGCGAAATGCAATGCGTCCAGTAGCTCATGCGAAGGTGCATCGACTACCGCAACATGAACCACCTCTTCGCTGGCATCCAGCAAGACTCCATGATAACGCAGACACAGGGc                                                                                                                                                                                                                                                                       >  2:391009/1‑120 (MQ=255)                                                                                                                                                             gtggtAGCGAAATGCAATGCGTCCAGTAGCTCATGCGAAGGTGCATCGACTACCGCAACATGAACCACCTCTTCGCTGGCATCCAGCAAGACTCCATGATAACGCAGACACAGGGCAGTg                                                                                                                                                                                                                                                                   <  1:391015/120‑1 (MQ=255)                                                                                                                                                                  aGCGAAATGCAATGCGTCCAGTAGCTCATGCGAAGGTGCATCGACTACCGCAACATGAACCACCTCTTCGCTGGCATCCAGCAAGACTCCATGATAACGCAGACACAggg                                                                                                                                                                                                                                                                        >  1:71322/1‑110 (MQ=255)                                                                                                                                                                  aGCGAAATGCAATGCGTCCAGTAGCTCATGCGAAGGTGCATCGACTACCGCAACATGAACCACCTCTTCGCTGGCATCCAGCAAGACTCCATGATAACGCAGACACAGGGCAGTGAGCtg                                                                                                                                                                                                                                                              >  1:659836/1‑120 (MQ=255)                                                                                                                                                                  aGCGAAATGCAATGCGTCCAGTAGCTCATGCGAAGGTGCATCGACTACCGCAACATGAACCACCTCTTCGCTGGCATCCAGCAAGACTCCATGATAACGCAGACACAGGGCAGTGAGCTGTGGAATATTCATTGCCGCTCCTTAGTTGGCGTCATCAAAGCGGAAGACATCTTCGCAGGCTTGCTGCAATGCGCTGTCACTTTGAATATTGCAGTTGCGCGTCCAGCCGGTGACGCCGTTTGCGTTATCCCAACCCGGTGTCATGACGACGCTTa                                                                                                   >  1:230654/1‑275 (MQ=255)                                                                                                                                                                      aaaTGCAATGCGTCCAGTAGCTCATGCGAAGGTGCATCGACTACCGCAACATGAACCACCTCTTCGCTGGCATCCAGCAAGACTCCATGATAACGCAGACACAGGGCAGt                                                                                                                                                                                                                                                                    <  2:71321/110‑1 (MQ=255)                                                                                                                                                                      aaaTGCAATGCGTCCAGTAGCTCATGCGAAGGTGCATCGACTACCGCAACATGAACCACCTCTTCGCTGGCATCCAGCAAGACTCCATGATAACGCAGACACAGGGCAGTGAGCTGTGGa                                                                                                                                                                                                                                                          <  2:659827/120‑1 (MQ=255)                                                                                                                                                                              tgcGTCCAGTAGCTCATGCGAAGGTGCATCGACTACCGCAACATGAACCACCTCTTCGCTGGCATCCAGCAAGACTCCATGATAACGCAGACACAGGGCAGTGAGCTGTGGAATATTCATTGCCGCTCCTTAGTTGGCGTCATCAAAGCGGAAGACATCTTCGCAGGCTTGCTGCAATgc                                                                                                                                                                                      >  2:95265/1‑180 (MQ=255)                                                                                                                                                                                  tCCAGTAGCTCATGCGAAGGTGCATCGACTACCGCAACATGAACCACCTCTTCGCTGGCATCCAGCAAGACTCCATGATAACGCAGACACAGGGCAGTGAGCTGTGGAATATTCATTGCCGCTCCTTAGTTGGCGTCATCAAAGCGGAAGACATCTTCGCAGGCTTGCTGCAATGCGCTg                                                                                                                                                                                  <  1:95266/180‑1 (MQ=255)                                                                                                                                                                                   ccAGTAGCTCATGCGAAGGTGCATCGACTACCGCAACATGAACCACCGCTTCGCTGGCATCCAGCAAGACTCCATGATAACGCAGACACAGGGCAGTg                                                                                                                                                                                                                                                                   >  1:693680/1‑98 (MQ=255)                                                                                                                                                                                       tAGCTCATGCGAAGGTGCATCGACTACCGCAACATGAACCACCTCTTCGCTGGCATCCAGCAAGACTCCATGATAACGCAGACACAGGGCAGTGAGCt                                                                                                                                                                                                                                                               <  2:693671/98‑1 (MQ=255)                                                                                                                                                                                         agaaaagacagggTGCATCGACGCCCCCAACATGACCCACCTCTTCGCTGGCATCCAGCAAGACTCCATGATAACGCAGACACAGGGCAGTGAGCTGTGGAATATTCATTGCCGCTCCTTAGTTGGCGTCATCAAAGCGGAAGACATCTTCGCAGGCTTGCTGCAATGCGCTGTCACTTTGAATATTGCAGTTGCGCGTCCAGCCGGTGACGCCGTTTGCGTTATCCCAACCCGGTGTCATGACGACGCTTAGCCCATTGAGACTTTCTTGCCCg                                                                            <  2:681470/264‑1 (MQ=255)                                                                                                                                                                                          cTCATGCGAAGGTGCATCGACTACCGCAACATGAACCACCTCTTCGCTGGCATCCAGCAAGACTCCATGATAACGCAGACACAg                                                                                                                                                                                                                                                                          >  2:115772/1‑84 (MQ=255)                                                                                                                                                                                            cATGCGAAGGTGCATCGACTACCGCAACATGAACCACCTCTTCGCTGGCATCCAGCAAGACTCCATGATAACGCAGACACAGGGCAGTGAGCTGTGGAATATTCATTGCCGCTCCTTAGTTGGCGTCATCAAAGCGGAAGACATCTTCGCAGGCTTGCTGCAATGCGCTGTCACTTTGAATATTGCAGTTGCGCGTCCAGCCGGTGACg                                                                                                                                           >  1:665646/1‑209 (MQ=255)                                                                                                                                                                                              tGCGAAGGTGCATCGACTACCGCAACATGAACCACCTCTTCGCTGGCATCCAGCAAGACTCCATGATAACGCAGACACAGGGCa                                                                                                                                                                                                                                                                      <  1:115773/84‑1 (MQ=255)                                                                                                                                                                                                cGAAGGTGCATCGACTACCGCAACATGAACCACCTCTTCGCTGGCATCCAGCAAGACTCCATGATAACGCAGACACAGGGCAGTGAGCTGTGGAATATTCATTGCCGCTCCTTAGTTGGCGTCATCAAAGCGGAAGACATCTTCGCAGGCTTGCTGCAATGCGCTGTCACTTTGAATATTGCAGTTGCGCGTCCAGCCGGTGACGCCGt                                                                                                                                       <  2:665637/209‑1 (MQ=255)                                                                                                                                                                                                       gCATCGACTACCGCAACAGGAACCACCTCTTCGCTGGCATCCAGCAAGACTCCATGATAACGCAGACACAGGGCAGTGAGCTGTTGAATATTCATTGCCGCTCCTTAGTTGGCGTCATCAAANCGGAAGACATCTTCGCAGGCTTGCTGCAATGCGCTGTCACTTTGAATATTGCAGTTGCGCGTCCAGCCGGTGACGCCGTTTGCGTTATCCCAACCCGGTGTCATGACGACGCTTAGCCCATTGAGACTTTCTTGCCCGGTCAGCGAcaccac                                                              <  1:617417/275‑1 (MQ=255)                                                                                                                                                                                                        cATCGACTACCGCAACATGAACCACCTCTTCGCTGGCATCCAGCAAGACTCCATGATAACGCAGACACAGGGCAGTGAGCTGTGGAATATTCATTGCCGCTCCTTAGTTGGCGTCATCAAAGCGGAAGACATCTTCGCAGGCTTGCTGCAATGCGCTGTCACTTGGAATATTGCAGTTGCGCGNCCAGCCGGTGACGCCGTTTGCGTTATCCCAACCCGGTGTCATGACGACGCTTAGCCCATTGAGACTTTCTTGCCCGGTCAGCGAcaccac                                                              >  1:525781/1‑274 (MQ=255)                                                                                                                                                                                                         aTCGACTACCGCAACATGAACCACCTCTTCGCTGGCATCCAGCAAGACTCCATGATAACGCAGACACAGGGCAGTGAGCTGTGGAATATTCATTGCCGCTCCTTAGTTGGCGTCATCAAAGCGGAAGACATCTTCGCAGGATTGCTGCAATGCGCTGTCACTTTGAATATTGCAGTTGCGCGTCCAGCCGGTGACACCGTTTGCGTTATCCCAACCCGGTGTCATGACGACGCTTAGCCCATTGAGCCTTTCTTGCCCGGTCAGCGACACCACg                                                             >  1:689022/1‑274 (MQ=255)                                                                                                                                                                                                               tACCGCAACATGAACCACCTCTTCGCTGGCATCCAGCAAGACTCCATGATAACGCAaacggcgtcaccggctggacgcgcaactgcaatattcaaagtgacagcgcattgcagcaagcctgcgaagatgtcttccgctttgatgacgccaactaaggagcggcaatgaatattc                                                                                                                                                           >  2:591380‑M1/1‑56 (MQ=255)                                                                                                                                                                                                               tACCGCAACATGAACCACCTCTTCGCTGGCATCCAGCAAGACTCCATGATAACGCAGACACAGGGCAGTGAGCTGTGGAATATTCATTGCCGCTCCTTAGTTGGCGTCATCAAAGCGGAAGACATCTTCGCAGGCTTGCTGCAATGCGCTGTCACTTTGAATATTGCAGTTGCGCGTCCAGCCGGTGACGCCGTTTGCGTTATCCCCACCCGGTGTCATGACGACGCTTAGCCCATTGAGCCTTTCTTg                                                                                >  1:86987/1‑249 (MQ=255)                                                                                                                                                                                                               tACCGCAACATGAACCACCTCTTCGCTGGCATCCAGCAAGACTCCATGATAACGCAGACACAGGGCAGTGAGCTGTGGAATATTCATTGCCGCTCCTTAGTTGGCGTCATCAAAGCGGAAGACATCTTCGCAGGCTTGCTGCAATGCGCTGTCACTTTGAATATTGCAGTTGCGCGTCCAGCCGGTGACGCCGTTAGCGTTATCCCAACCCGGTGTCATGACGACGCTTAGCCCATTGAGACTTTCTTGCCCGGTCAGCGAcacctgtccctta                                                       >  1:681479/1‑265 (MQ=255)                                                                                                                                                                                                                   gCAACATGAACCACCTCTTCGCTGGCATCCAGCAAGACTCCATGATAACGCAaacggcgtcaccggctggacgcgcaactgcaatattcaaagtgacagcgcattgcagcaagcctgcgaagatgtcttccgctttgatgacgccaactaaggagcggcaatgaatattccaca                                                                                                                                                       <  1:591389‑M1/174‑123 (MQ=255)                                                                                                                                                                                                                                        cTGGCATCCAGCAAGACTCCATGATAACGCAGACACAg                                                                                                                                                                                                                                                                          >  1:344455/1‑38 (MQ=255)                                                                                                                                                                                                                                           gCATCCAGCAAGACTCCATGATAACGCAGACACAGGGCAGTGAGCTGTGGAATATTCATTGCCGCTCCTTAGTTGGCGTCATCAAAGCGGAAGACATCTTCGCAGGCTTGCTGCAATGCGCTGTCACTTTGAATATTGCAGTTGCGCGTCCAGCCGGTGACGCCGTTTGCGTTATCCCAACCCGGTGTCATGACGACGCTTAGCCCATTGAGACTTTCTTGCCCGGTCAGCGACACCACGCCCTTTGCCACACTCATTGCTGAAACAAAGCGggt                          >  1:147211/1‑275 (MQ=255)                                                                                                                                                                                                                                            cATCCAGCAAGACTCCATGATAACGCAGACACAGGGCa                                                                                                                                                                                                                                                                      <  2:344449/38‑1 (MQ=255)                                                                                                                                                                                                                                            cATCCAGCAAGACTCCATGATAACGCAGACACAGGGCAGTGAGCTGTGGAATATTCATTGCCGCTCCTTAGTTGGCGTCATCAAAGCGGAAGACATCTTCGCAGGCTTGCTGCAATGCGCTGTCACTTTGAATATTGCAGTTGCGCGTCCAGCCGGTGACGCCGTTTGCGTTATCCCCACCCGGTGTCATGACGACGCTTAGCCCATTGAGACTTTCTTGCCCGGTCAGCGACACCACGCCCGTGGCCACACTCATGTCTGAAACATATCGggtc                         >  2:706521/1‑274 (MQ=255)                                                                                                                                                                                                                                                           cATGATAACGCAGACACAGGGCAGTGAGCTGTGGAATATTCATTGCCGCTCCTTAGTTGGCGtc                                                                                                                                                                                                                             >  2:467498/1‑64 (MQ=255)                                                                                                                                                                                                                                                           cATGATAACGCAGACACAGGGCAGTGAGCTGTGGAATATTCATTGCCGCTCCTTAGTTGGCGTCATCAAAGCGGAAGACATCTTCGCAGGCTTGCTGCAATGCGCTGTCACTTTGAATATTGCAGTTGCGCGTCCAGCCGGTGACGCCGTTTGCGTTATCCCAACCCTGTGTCATGACGACGCTTAGCCCATTGAGACTTTCTTGCCCGATCAGCTCCACCACGCCCTTTGCCACACTCATGGCTGAAACATAGCGGGTGGTTGTAGgagacagc          >  1:278285/1‑271 (MQ=255)                                                                                                                                                                                                                                                           cATGATAACGCAGACACAGGGCAGTGAGCTGTGGAATATTCATTGCCGCTCCTTAGTTGGCGTCATCAAAGCGGAAGACATCTTCGCAGGCTTGCTGCAATGCGCTGTCACTTTGAATATTGCAGTTGCGCGTCCAGCCGGTGACGCCGTTTGCGTTATCCCAACCCGGTGTCATGACGACGCTTAGCCCATTGAGACTTTCTTGCCCGGTCAGCGACACCACGCCCTTTGCCACACTCATGGCTg                                       >  2:53334/1‑246 (MQ=255)                                                                                                                                                                                                                                                             tGATAACGCAGACACAGGGCAGTGAGCTGTGGAATATTCATTGCCGCTCCTTAGTTGGCGTCATCAAAGCGGAAGACATCTTCGCAGGCTTGCTGCAATGCGCTGTCACTTTGAATATTGCAGTTGCGCGTCCAGCCGGTGACGCCGTTTGCGTTATCCCAACCCGGTGTCATGACGACGCTTAGCCCATTGAGACTTTCTTGCCCGGTCAGCGACACCACGCCCTTTGCCACACTCCTGGCTGAAACAAAGCGGGGGGTGGgcggcgcgtgga         >  2:249181/1‑268 (MQ=255)                                                                                                                                                                                                                                                               aTAACGCAGACACAGGGCAGTGAGCTGTGGAATATTCATTGCCGCTCCTTAGTTGGCGTCATCAAAGCGGAAGACATCTTCGCAGGCTTGCTGCAATGCGCTGTCACTTTGAATATTGCAGTTGCGCGTCCAGCCGGTGACGCCGTTTGCGTTATCCCAACCCGGTGTCATGACGACGCTTAGCCCATTGAGACTTTCTTGCCCGGTCAGCGACACCACGCCCTTTGCCACACTCATGGCTGAAAc                                   <  1:53334/246‑1 (MQ=255)                                                                                                                                                                                                                                                               aTAACGCAGACACAGGGCAGTGAGCTGTGCAATATTCATTGCCGCTCCTTAGTTGGCGtcatca                                                                                                                                                                                                                         <  1:467505/64‑1 (MQ=255)                                                                                                                                                                                                                                                                  aCGCAaacggcgtcaccggctggacgcgcaactgcaatattcaaagtgacagcgcattgcagcaagcctgcgaagatgtcttccgctttga                                                                                                                                                                                           >  2:378990‑M1/1‑5 (MQ=255)                                                                                                                                                                                                                                                                   cGCAaacggcgtcaccggcttgacgcgcaactgcaatattcaaagtgacagcgcattgcagcaagcctgcgaagatgtcttccgctttgatgacgccaactaaggagcggcaatgaatattccaaggctcactgccctgtgtctgcgttatcatggagtcttgctggatgccagcgaagaggtggttcatgttgcggtagtcgatgcaccttcgcatgagctactggacgcattgcatttcgctaccaccaaacgtattgagatcacctgctgga  <  1:580987‑M1/275‑272 (MQ=255)                                                                                                                                                                                                                                                                   cGCAaacggcgtcaccggctggacgcgcaactgcaatattcaaagtgacagcgcattgcagcaagcctgcgaagatgtcttccgctttgatgacgccaactaaggagcggcaatgaatattccacagctcactgccctgtgtctgcgttatcatggagtcttgctggatgccagcgaagaggtggttcatgttgcggtagtcgatgcaccttcgcatgcgctacgtgacgcattgcatttcgctaccaccaaaagcattgagatcccttgacggt  >  2:284199‑M1/1‑4 (MQ=255)                                                                                                                                                                                                                                                                   cGCAaacggcgtcaccggctggacgcgcaactgcaatattcaaagtgacagcgcattgcagcaagcctgcgaagatgtcttccgctttgatgacgccaactaaggagcggcaatgaatattccacagctcactgccctgtgtc                                                                                                                                      >  1:79544‑M1/1‑4 (MQ=255)                                                                                                                                                                                                                                                                   cGCAGACACAGGGCAGTGAGCTGTGGAATATTCATTGCCGCTCCTTAGTTGGCGTCATCAAAGCGGAAGACATCTTCGCAGGCTTGCTGCAATGCGCTGTCACTTTGAATATTGCAGTTGCGCGTCCAGCCGGTGACGCCGtt                                                                                                                                      >  2:79543/1‑143 (MQ=255)                                                                                                                                                                                                                                                                     cAGACACAGGGCAGTGAGCTGTGGAATACTCATTGCCGCTCCTTAGTTGGCGTCATCAAAGCggc                                                                                                                                                                                                                  >  1:566365/1‑64 (MQ=255)                                                                                                                                                                                                                                                                      aaacggcgtcaccggctggacgcgcaactgcaatattcaaagtgacagcgcattgcagcaagcctgcgaagatgtcttccgctttgatgac                                                                                                                                                                                       <  1:378996‑M1/91‑91 (MQ=255)                                                                                                                                                                                                                                                                      |                                                                                                                                                                                                                                                                                GACGCGCGTTGTTCCAGCGCAGATTGTAACGTTCGAGTTAGCAACTCTGCTTTGGGCTGATGCTTCTCCTGAACAGCTACGGGCAATGTCTGTTGTGTGCGACTGGCGTGACCTTCCATTTGTTGGCGCGTCCAGCAGGTGATCTCAATACGTTTGGTGGTAGCGAAATGCAATGCGTCCAGTAGCTCATGCGAAGGTGCATCGACTACCGCAACATGAACCACCTCTTCGCTGGCATCCAGCAAGACTCCATGATAACGCAGACACAGGGCAGTGAGCTGTGGAATATTCATTGCCGCTCCTTAGTTGGCGTCATCAAAGCGGAAGACATCTTCGCAGGCTTGCTGCAATGCGCTGTCACTTTGAATATTGCAGTTGCGCGTCCAGCCGGTGACGCCGTTTGCGTTATCCCAACCCGGTGTCATGACGACGCTTAGCCCATTGAGACTTTCTTGCCCGGTCAGCGACACCACGCCCTTTGCCACACTCATGGCTGAAACATAGCGGGTGGTGGTAGGCGAGGGAATGCCATT  >  CP009273/113294‑113826

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.