New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP009273	128164 =	59 (1.530)	4 (0.110)	4/306	NT	6.5%	coding (63/2598 nt)	acnB	bifunctional aconitate hydratase 2/2‑methylisocitrate dehydratase
	?	CP009273	128299 =	58 (1.550)					coding (198/2598 nt)	acnB	bifunctional aconitate hydratase 2/2‑methylisocitrate dehydratase

AGGGAAACAATCTCTAGACCATCCTTAACGATTCAGCCACTTTTTTATGTTGCTTTTTTGTAAACAGATTAACACCTCGTCAAAATCCTGCTATTCTGCCCGTTGCGGTACTGGGCATTTACCCTACAAACTGCTGTCTCACAGGAGCGTGAAGAGAATCGCCTGCCGCACTATGACAATGAGAG‑CGAGGAGAACCGTCGTGCTAGAAGAATACCGTAAGCACGTAGCTGAGCGTGCCGCTGAGGGGATTGCGCCCAAACCCCTGGATGCAAACCAAATGGCCGCACTTGTAGAGCTGCTGAAAAACCCGCCCGCGGGCGAAGAAGAATTCCTGTTAGATCTGTTAACCAACCGTGTTCCCCCAGGCGTCGATGAAGCCGCCTATGTCAAAGCAGGCTTCCTGGCTGCTATCGCGAAAGGCGAAGCCAAATCCCCTCTGCTGACTCCGGAAAAAGCCATCGAACTGCTGGGCACCATGCAGGGTGGTTACAACATTCATCCGCTGATCG  >  CP009273/127903‑128411                                                                                                                                                                                                                                                                       |                                                                                                                                                                                                                                                        aGGGAAACAATCTCTAGACCATCCTTAACGATTCAGCCACTTTTTTATGTTGCTTTTTTGTAAACATATTAACACCTCGTCAAAATCCTGCTATTCTGCCCGTTGCGGTACTGGGCATTTACCCTACAAACTGCTGTCTCACAGGAGCGTGAAGAGAATCGACTGCCGCACTATGACAATGAGAG‑CGAGGAGAACCGTCGTGCTAGAAGCATACCTTAAGCAAGAAGCTGCACGTGCCGCGGTGGGGATTTCGCCCAACccccctctttcctcac                                                                                                                                                                                                                                            >  2:590541/1‑263 (MQ=255)          aattttcaacaaTCCTTAACGTTTTANACACTTTTTTATGTTGCTTTTTTGTAAATAGATTAACACCTCGTCAAAATCCTTCTATTCTGCCCGTTGCGGTACTGGGCATTTACCCTACAAACTGCTGTCTCACAGGAGCGTGAAGAGAATCGCCTGCCGCACTATGACAATGAGAG‑CGAGGAGAACCGTCGTGCTAGAAGAATACCGTAAGCACGTAGCTGAGCGTGCCGCTGAGGGGATTGCGCCCAAACCCCTGGATGCAAACCAAATGGCCg                                                                                                                                                                                                                                   <  2:462618/264‑1 (MQ=255)          aTCTCTAGACCATCCTTATCGATTCATCCACTTTTTTATGTTGCTTTTTTGTAAACAGATTAACACCTCGTCAAAATCCTGCTATTCTGCCCGTTGCGGTACTGGGCATTTACCCTACAAACTGCTGTCTCACAGGAGCGTGAAGAGAATCGCCTGCCGCACTATGACAATGAGAG‑CGAGGAGAACCGTCGTGCTAGAAGAATACCGTAAGCACGTAGCTGAGCGTGCCGCTGAGGGGATTGCGCCCAAACCCCTGGATGCAAACCAAATGGCCg                                                                                                                                                                                                                                   <  1:300079/275‑1 (MQ=255)                           aaCGTTTCTTCCACTTTTTTATGTTGCTTTTTTGTAAACAGATTAACACCTCGTCAAAATCCTGCTATTCTGNCCGTTGCGGTACTGGGCATTTACCCTACAAACTGCTGTCTCACAGGAGCGTGAAGAGAATCGCCTGCCGCACTATGACAATGAGAG‑CGAGGAGAACCGTCGTGCTAGAAGAATACCGTAAGCACGTAGCTGAGCGTGCCGCTGAGGGGATTGCTGCCAGCCCCCTGGTTGCAAACCAAATGGc                                                                                                                                                                                                                                     <  1:506053/256‑1 (MQ=255)                                               cgccagtgactttGTAAACAGATTAACACCTCGTCAAAATCCTGCTATTCTGCCCGTTGCGGTACTGGGCATTTACCCTACAAACTGCTGTCTCACAGGAGCGTGAAGAGAATCGCCTGCCGCACTATGACCATGAGAG‑CGAGGAGAACCGTCGTGCTAGAAGAATACCGTAAGCACGTAACTGAGCTTGCCGCTGAGGGGATTGCGCAAAAACCCCTGGATGCAAACCACATGGCCGAACATGAAGGGCTGCGGAAAAACCCGACCGCGTGCgc                                                                                                                                                                                              >  2:252568/11‑274 (MQ=255)                                                    tcTTTTTTGTAAACAGATTAACACCTCGTCAAAATCCTGCTATTCTGCCCGTTGCGGTACTGGGCAGTTACCCTACAAACTGCTGTCTCACAGGAGCGTGAAGAGAATCGCCTGCCGCACTATGGCAATGAGAG‑CGAGGAGAACCGTCGTGCTAGAAGAATACCGTAAGCACGTAGCTGAGCGTGCCGCTGAGGGGATTGCGCCCAAACCCCTGGATGCAAACCAAATGGCCGCACTTGTAGAGCTGCTGAAAATCCCGCCCGCGGGCgaagaa                                                                                                                                                                                          <  1:590550/273‑1 (MQ=255)                                                       tttttGTAAACAGATTAACACCTCGTCAAAAGCTGGCTTTGCGGCCCTGTGCGGGTATTGGCGTTTACCCTACAAACAGCTGGTTCAGAGGAACGTGAAGAGACTCGCCGGGCGCACTATGAGAATGAGAG‑CGAGGATAACCGACGTGCTAGAAGAATACCGTAAGCACGTAGCTGAGCGTGCCGCTGAGGGGATTGCGCCCAAACCCCGGGATGTAAACCAAATGGCCGCACTTGTAGAGGTGCTGAAAAACCCGCCCGCGGGCGAAGAAGAAt                                                                                                                                                                                      <  2:692298/275‑1 (MQ=255)                                                                         cacCTCGTCAAAATCCTGCTATTCTGCCCGTTGCGGTACTGGGCATTTACCCTACAAACTGCTGTCTCACAGGAGCGTGAAGAGAATCGCCTGCCGCACTATGACAATGAGAG‑CGAGGAGAACCGTCGTGCTAGAAGAATACCGTAAGCACGTAGCTGAGCGTGCCGCTGAGGGGATTGCGCCCAAACCCCTGGATGCAAACCAAATGGCCGCACTTGTAGCTCTGCTGAAAAAACCGCCCGCGGGCGATGAAGAATTCCTTTTTGCTCTGtcca                                                                                                                                                                    >  2:45130/1‑272 (MQ=255)                                                                            cTCGTCAAAATCCTGCTATTCTGCCCGTTGCGGTACTGGGCATTTACCCTACAAACTGCTGTCTCACAGGAGCGTGAAGAGAATCGCCTGCCGCACTATGACAATGAGAG‑CGAGGAGAACCGTCGTGCTAGAAGAATACCGTAAGCACGTAGCTGAGCGTGCCGCTGAGGGGATTGCGCCCAAACCCCTGGATGCAAACCAAATGGCCGCACTTGTAGAGCTGCTGAAAAACCCGCCCGCGGGCGAAGAAGAATCCACGTTAGATCTGTTaacca                                                                                                                                                                 >  2:222867/1‑275 (MQ=255)                                                                              cGTCAAAATCCTGCTATTCTGCCCGTTGCGGTACTGGGCATTTACCCTACAAACTGCTGTCTCACAGGAGCGTGAAGAGAATCGCCTGCCGCACTATGACAATGAGAG‑CGAGGAGAACCGTCGTGCTAGAAGAATACCGTAAGCACGTAGCTGAGCGTGCCGCTGAGGGGATTGCGCCCAAACCCCTGGATGCAAACCAAATGCCCGCACTTGTAGAGCTGCTGAACAACCCGCCCGCGGGCAAAAAAGACTTCCTTTTAGactctttaa                                                                                                                                                                    >  2:359793/1‑262 (MQ=255)                                                                              cGTCAAAATCCTGCTATTCTGCCCGGTGCGGTACTGGCCATTTACCCTACAAACTGCTGTCTCACATGAGCGTGCAGAGAATCGCCTGCCGCACTATGACAATGAGAG‑CGAGGAGAACCGTCTTGCTAGAAGAATACCGGAAGCATGTAGCTNAGCGTGCCGCTGAGGGGATTGCGCCCAAACCCCTGGATGCAAACCACATGACCGCACTTGTAGAGCTGCTGAAAAAAGCGCCCGCGGGCGAAGAAGAATTACTGTTAAATCTGTTaaccaac                                                                                                                                                               >  1:618267/1‑275 (MQ=255)                                                                                    aatCCTGCTATTCTGCCCGTTGCGGTACTGGGCATTTACCCTACAAACTGCTGTCTCACAGGAGCGTGAAGAGAATCGCCTGCCGCACTATGACAATGAGAG‑CGAGGAGAACCGTCGTGCTAGAAGAATACCTTAAGCACGTAGCTGAGCGTGCCGCTGAGGGGATTGCGCCCAAACCCCTGGATGCAAACCAAATGGCCGAACTTGTAGACATGCTGAAAAACCCGCCCGCGGGCGACGAAGAATTCCTGTTAGATCTGTTAACAAACCGTGtt                                                                                                                                                         >  1:287981‑M2/4‑275 (MQ=255)                                                                                       tcagcagcgtgtgagaaagtgcttgggcagcaataggtgccagtttggcatcatccagcgcgtcgatcagcggatgaatgttgtaaccaccctgcatggtgcccagcagttcgatggctttttccggagtcagcagaggggatttggcttcgcctttcgcgatagcagccaggaagCCt                                                                                                                                                                                                                                                       <  1:509102‑M1/3‑1 (MQ=255)                                                                                                      aaagtgctttggcagcaataggtgccagtttggcatcatccagcgcgtcgatcagcggatgaatgttgtaaccaccctgcatggtgcccagcagttcgatggctttttccggagtcagcagaggggatttggcttcgcctttcgcgatagcagccaggaagc                                                                                                                                                                                                                                                         >  2:417584‑M1/162‑162 (MQ=255)                                                                                                        tGCGGTACTGGGCATTTACCCTACAAACTGCTGTCTCACAGGAGCGTGAAGAGAATCGCCTGCCGCACTATGACAATGAGAG‑CGAGGAGAACCGTCGTGCTAGAAGAATACCGTAAGCACGTAGCTGAGCGTGCCGCTGAGGGGATTGCGCCCAAACCCCTGGATGCAAACCAAATGGCCGCANTTGTAGAGCTGCTGAAAAACCCGCCCGCGGGCGAAGAAGAATTCCTGTTAGATCTGTTAACCAACCGTGTTCCCCCAGGCGTCACTGAAg                                                                                                                                      >  1:556045/1‑274 (MQ=255)                                                                                                          tgctttggcagcaataggtgccagtttggcatcatccagcgcgtcgatcagcggatgaatgttgtaaccaccctgcatggtgcccagcagttcgatggctttttccggagtcagcagaggggatttggcttcgcctttcgcgatagcagccaggaagcc                                                                                                                                                                                                                                                        <  2:244514‑M1/2‑1 (MQ=255)                                                                                                             tACTGGGCATTTACCCTACAAACTGCTGTCTCACAGGAGCGTGAAGAGAATCGCCTGCCGCACTATGACAATGAGAG‑CGAGGAGAACCGTCGTGCTAGAAGAATACCGTAAGCACGTAGCTGAGCGTGCCGCTGAGGGGATTGCGCCCAAACCCCTGGATGCAAACCAAATGGCCGCACTTGTAGAGCTGCTGAAAAACCCGCCcgcg                                                                                                                                                                                                   >  1:173686/1‑208 (MQ=255)                                                                                                                  ggCATTTACCCTACAAACTGCTGTCTCACAGGAGCGTGAAGAGAATCGCCTGCCGCACTATGACAATGAGAG‑CGAGGAGAACCGTCGTGCTAGAAGAATACAGTAAGCACGTAGCTGAGCGTGCCGCTGAGGGGATTGCGCCCAAACCCCTGGATGCAAACCAAATGGCAGCACTTGTAGAGCTGCTGAAAAACCCGCCCGCGGGCGAATAAGAATTCCTGTTAGAGCTGTTAACCAACCGTGTTCCCCCAGGAGGCGATGAAACCCCCAATGTc                                                                                                                           >  2:131283/1‑275 (MQ=255)                                                                                                                  ggCATTTACCCTACAAACTGCTGTCTAACAGGAGCGTGAAGAGAATCGCCTGCCGCACTATGACAATGAGAG‑CGAGGAGAACCGTCGTGCTAGAAGAATACCGTAAGCACGTAGCTGAGCGTGCCGCTGAGGGGATTGCGCCCAAACCCCTGGATGCAAACCAAATGGCCGCACTTGTAGAGCNGCTGAAAANCCCGCCCGCGGGCGAAGAAGAATTCCTGTTAGATCTGTTAACCAACCGTGTTCCCCCAGGCGTCGATGAAGCCGACTAt                                                                                                                              >  1:465433/1‑272 (MQ=255)                                                                                                                         aCCCTACAAACTGCTGTCTCACCGGAGCGTGAAGAGAATCGCCTGCCGCACTATGACAATGAGAG‑CGAGGAGAACCGTCGTGCTAGAAGAATACCGTAAGCACGTAGCTGAGCGTGCCGCTGAGGGGATTGCGCCCAAACCCCTGGATGCAAACCAAATGGCCGCACTTGTAGAGCAGCTGAAAAACCCGCCCGCGGGCGAAGAAGAATTCCTGTTAGATCTGTTAACCACCCGGTTTCCACCAAGCGTCGATGAAGCCGCCTATGTCAAAGCa                                                                                                                     >  1:587831/1‑274 (MQ=255)                                                                                                                              aCAAACTGCTGTCTCACAGGAGCGTGAAGAGAATCGCCTGCCGCACTATGACAATGAGAG‑CGAGGAGAACCGTCGTGCTAGAAGAATACCGTAAGCACGTAGCTGAGCGTGCCGCTGAGGGGATTGCGCCCAAACCCCTGGATGCAAACCAAATGGCCGCACGTGTAGAGCTGCTGAAAAACCCGCCCGCGGGCGAAGAAGAATTCATGTTAGATCTGTTAACCCACCGTGTTCCCCCAGGCGGCGATTAAGCCGCCTATTTCAAACCAgtcctc                                                                                                               >  2:637243/1‑270 (MQ=255)                                                                                                                                 aaCTGCTTTCGTACAGGAGCGTGAAGAGAATCGCCTGCCGCACTATGACAATGAGAG‑CGAGGAGAACCGTCGTGCTAGAAGAATACCGTAAGCACGTAGCTGAGCGTGCCGCTGAGGGGATTGCGCCCAAACCCCTGGATGCAAACCAAATGGCCGCACTTGTAGAGCTGCTGAAAAACCCGCCCGCGGGCGAAGAAGAATTCCTGTTAGATCTGTTAACCAACCGTGTTCCCCCAGGCGTCGATGAAGCCGCCTATGTCAAAGCAGGCTTCCt                                                                                                             <  1:131284/274‑1 (MQ=255)                                                                                                                                    tgctgTCTCACAGGAGCGTGAAGAGAATCGCCTGCCGCACTATGACAATGAGAG‑CGAGGAGAACCGTCGTGCTAGAAGAATACCGTAAGCACGTAGCTGAGCGTGCCGCTGAGGGGATTGCGCCCAAACCCCTGGATGCAAACCAAATg                                                                                                                                                                                                                                       >  1:270680/1‑149 (MQ=255)                                                                                                                                       tgTCTCACAGGAGCGTGAAGAGAATCGCCTGCCGCACTATGACAATGAGAG‑CGAGGAGAACCGTCGTGCTAGAAGAATACCGTAAGCACGTAGCTGAGCGTGCCGCTGAGGGGATTGCGCCCAAACCCCTGGATGCAAACCAAATGTACGCACTTGTANAGCTGCTGAAAAACCCGCCCGCGGGCGAAGAAGAATTCCTGTTAGATCTGTTAACCAACCGTGTTCCCCCAGGCGTCGATGAAGCCGCCTATGTCAAAGCAGGCTTCCTGgctgct                                                                                                      >  1:665281/1‑275 (MQ=255)                                                                                                                                        gTCTCACAGGAGCGTGAAGAGAATCGCCTGCCGCACTATGACAATGAGAG‑CGAGGAGAACCGTCGTGCTAGAAGAATACCGTAAGCACGTAGCTGAGCGTGCCGCTGAGGGGATTGCGCCCAAACCCCTGGATGCAAACCAAATGGCCg                                                                                                                                                                                                                                   <  2:270675/149‑1 (MQ=255)                                                                                                                                         tctcACAGGAGCGTGAAGAGAATCGCCTGCCGCACTATGACAATGAGAG‑CGAGGAGAACCGTCGTGCTAGAAGAATACCGTAAGCACGTAGCTGAGCGTGCCGCTGAGGGGATTGCGCACAAACCCCTGGATGCAAACCAAATGGCCGCACTTGTAGAGCTGCTGAAAAACCCGCACGCGGGCGAAGACGAATTCATGTTAGATCTGTTAAACACCCGTGTTCCCCCAGGCGTCGAGGAAGCCGCCCAGGTCAAAGCAGGCTTCCTGGCTTCTa                                                                                                     >  2:254277/1‑274 (MQ=255)                                                                                                                                                   gCGTGAAGAGAATCGCCTGCCGCACTATGACAATGAGAG‑CGAGGAGAACCGTCGTGCTAGAAGAATACCGTAAGCACGTAGCTGAGCGTGCCGCTGAGGGGGTTGCGCCCAAACCCCTGGATGCAAACCAAATg                                                                                                                                                                                                                                       >  2:433468/1‑134 (MQ=255)                                                                                                                                                     gTGAAGAGAATCGCCTGCCGCAATATGACAATGAGAG‑CGAGGAGAACCGTCGGGCTAGAAGAATACCGTAAGCACGTAGCTGAGCGTGCCGCTGAGTGGATTGCGCCCAAACCCCTGGATGCAAACCAAATGGCCGCACTTGTAGAGCTGCTGAAAAACCCGCCCGCGGGCGAAGAAGAATTCCTGTTAGATCTGTTAACCAACCGTGTTCCCCCAGGCGTCGATGAAGCCGCCTATGTCAAAGCAGGCTTCCTGGCTGCTATCGCGAAAGGCg                                                                                         <  1:359799/274‑1 (MQ=255)                                                                                                                                                      tGAAGAGAATCGCCTGCCGCACTATGACAATGAGAG‑CGAGGAGAACCGTCGTGCTAGAAGACTACCGTAAGCACGTATCTGAGCGTGCCGCTGAGGGGATTGCGCCCAAACCCCTGGATGCAAACCAAATGGCCGCACTTGTAGAGCTGCTGAAAAACCCGCCAGCGGGCGAAGAAGAATTCCNGTTAGATCTGTTAACCAACCGTGTTCCCCCAGGCGTCGATGAAGCCGCCTATGTCAAAGCAGGCTTCCGGGCTGCTATCGCGAAAgga                                                                                          >  1:549852/1‑271 (MQ=255)                                                                                                                                                       gAAGAGAATCGCCTGCCGCACTATGACAATGAGAG‑CGAGGAGAACCGTCGTGCTAGAAGAATACCGTAAGCACGTAGCTGAGCGTGCCGCTGAGGGGATTGCGCCCAAACCCCTGGATGCAAACCAAATGGCCg                                                                                                                                                                                                                                   <  1:433475/134‑1 (MQ=255)                                                                                                                                                       gAAGAGAATCGCCTGCAGCACTATGACAATGAGAG‑CGAGGAGAACCGTCGTGCTAGAAGAATACCGTAAGCACGTAGCTGAGCGTGCCGCTGAGGGGATTGCGCCCAAACCCCTGGATGCATACCAATTGGCCGCACTTGTAGAGCTGCTGAAAAACCCGCCCGCGGGCGAAGAAGAATTCCTGTTAGATCTGTTAACCAACCGTGTTCCCCCAGGCGTCGATGAAGCCGCCTATGTCAAAGCAGGCTTCCTGGCTGCTATCGCGAAAGGCGaa                                                                                       <  1:630583/274‑1 (MQ=255)                                                                                                                                                        aaGAGAATCGCCTGCCGCACTATGACAATGAGAG‑CGAGGAGAACCGTCGTGCTAGAAGAATACCGTAAGCACGTAGCTGAGCGTGCCGCTGAGGGGATTGCGCCCAAACCCCTGGATGCAAATCAAATAGCCGCACTTGTAGAGCTGCTGAAAAACCCGCCCGCGGGCGAAGAAGAATTCCTGTTAGATCTGTTAACCAACCGTGTTCCCCCAGGCGTCGATGAAGCCGCCTATGTCAAAGCAGGCTTCCTGGCTGCTATCGCGAAAGGCGAAGc                                                                                     <  1:637252/275‑1 (MQ=255)                                                                                                                                                         tcagcggatgaatgttgtaaccaccctgcatggtgcccagcagttcgatggctttttccggagtcagcagaggggatttggcttcgcctttcgcgatagcagccaggaagcc                                                                                                                                                                                                                                                        >  2:394363‑M1/111‑112 (MQ=255)                                                                                                                                                         agagAATCGCCTGCCGCACTATGACAATGAGAG‑CGAGGAGAACCGTCGTGCTAGAAGAATACCGTAAGCACGTAGCTGAGCGTGCCGCTGAGGGGATTGCGCCCAAACCCCTGGATGCAAACCAAATGGCCGCACTTGTAGAGCTGCTGAAAAACCCGCCAGCGGGCGAAGAAGAATTCCTGTTAGATCTGTTAACCAACCGTGTTCCCCCAGGCGTCGATGAAGCCGCATATGTCAAAGCAGTCTTCNTTGCTGCTGTCGCGacaatctaaacc                                                                                    >  2:464728/1‑264 (MQ=255)                                                                                                                                                               tCGCCTGCCGCACTATGACAATGAGAG‑CGAGGAGAACCGTCGTGCTAGAAGAATACCGTAAGCACGTAGCTGAGCGTGCCGCTGAGGGGATTGCGCCCAAACCCCTGGATGCAAACCAAATGGCCGCACTTGTAGAGCTGCTGAAAAACCCGCCCGCGGGCgaagaag                                                                                                                                                                                         >  2:643355/1‑168 (MQ=255)                                                                                                                                                                cGCCTGCCGCACTATGACAATGAGAG‑CGAGGAGAACCGTCGTGCTAGAAGAATACCGTAAGCACGTAGCTGAGCGTGCCGCTGAGGGGATTGCGCCCAAACCCCTGGATGCAAACCAAATGGCCGCACTTGTAGAGCTGCTGAAAAACCCGCCCGCGGGCGAAGAAGAATTCCTGTTAGATCTGTTAACCAACCGTGTTCCCCCAGGCGTCGATGAAGCCGCCTATGTCAAAGCAGGCTTCCTGGCTGCTATCGCGAAAGGCGAAGCCAAAt                                                                                <  1:592263/272‑1 (MQ=255)                                                                                                                                                                   cTGCCGCACTATGACGATGAGAG‑CGAGGAGAACCGTCGTGCTAGAAGAATACCGTAAGCACGTAGCTGAGCGTGCCGCTGAGGGGATTGCGCCCAAACCCCTGGATGCAAACCAAATGGCCGCACTTGTAGAGCTGCTGAAAAACCCGCCCGCGGGCGAAGAAGAAtt                                                                                                                                                                                     <  1:643364/168‑1 (MQ=255)                                                                                                                                                                            tATGACAATGAGAG‑CGAGGAGAACCGTCGTGCTAGAAGAATACCGTAAGCACGTAGCTGAGCGTGCCGCTGAGGGGATTGCGCCCAAACCCCTGGATGCAAACCAAATGGCCGCACTTGTAGAGCTGCTGAAAAACCCGCCCGCGGGCGAAGAAGAATTCCTGTTAGATCTGTTAACCAACCGTGTTCCCCCAGGCGTCGATGAAGCCGCCTATGTCAAAGCAGGCTTCCTGGCTGCTATCGCGAAAGGCGAAGCCAAATCCCCTCTGCTGACTc                                                                 <  1:222872/275‑1 (MQ=255)                                                                                                                                                                            tATGACAATG‑GAGACGAGGATAACCGTCGTGCTAGAAGAATACCGTAAGCACCTAGCTGAGCGTGCCGCTGAGGGGATTGCGCCCAAACCCCTGGATGCAAACCAAATGGCCGCACTTGTAGAGCTGCTGAAAAACCCGCCCGCGGGCGAAGAAGAATTCCTGTTAGATCTGTTAACCAACCGTGTTCCCCCAGGCGTCGATGAAGCCGCCTATGTCAAAGCAGGCTTCCTGGCTGCTATCGCGAAAGGCGAAGCCAAATCCCCTCTGCTGACTc                                                                 <  1:252573/275‑1 (MQ=255)                                                                                                                                                                             ccaccctgcatggtgcccagcagttcgatggctttttccggagtcagcagaggggatttggcttcgcctttcgcgatagcagccaggaagCCTGGATGCAAACCAAATGGCCGCACTTGTAGAGCTGCTGAAAAACCCGCCCGCGGGCGAAGAAGAATTCCTGTTAGATCTGTTAACCAACCGTGTTc                                                                                                                                                        <  1:5744‑M1/98‑1 (MQ=255)                                                                                                                                                                                 cctgcatggtgcccagcagttcgatggctttttccggaggcagcagaggggatttggcttcgcctttcgcgatagcagccaggaagCCTGGATGCAAACCAAATGGCCGCACTTGTAGAGCTGCTGAAAAACCCGCCCGCGGGCGAAGAAGAATTCCTGTTAGATCTGTTAACCAACCGTGTTccccc                                                                                                                                                    >  2:5744‑M1/87‑188 (MQ=255)                                                                                                                                                                                    tGAGAG‑CGAGGAGAACCGTCGTGCTAGAAGAATACCGTAAGCACGTAGCTGAGCGTGCCGCTGAGGGGATTGCGCCCAAACCCCTGGATGCAAACCAAATGGCCGCACTTGTAGAGCTGCTGAAAAACCCGCCCGCGGGCGAAGAAGAATTCCTGTTAGATCTGTTaaccaac                                                                                                                                                               >  2:507421/1‑173 (MQ=255)                                                                                                                                                                                      agag‑CGAGGAGAACCGTCGTGCTAGAAGAATACCGTAAGCACGTAGCTGAGCGTGCCGCTGAGGGGATTGCGCCCAAACCCCTGGATGCAAACCAAATGGCCGCACTTGTAGAGCTGCTGAAAAACCCGCCCGCGGGCGAAGAAGAATTCCTg                                                                                                                                                                                 >  2:414385/1‑153 (MQ=255)                                                                                                                                                                                        ag‑CGAGGAGAACCGTCGTGCTAGAAGAATACCGTAAGCACGTAGCTGAGCGTGCCGCTGAGGGGATTGCGCCCAAACCCCTGGATGCAAACCAAATGGCCGCACTTGTAGAGCTGCTGAAAAACCCGCCCGCGGGCGAAGAAGAATTCCCGTTAGATCTGTTAACCAACCgtg                                                                                                                                                           <  1:507428/173‑1 (MQ=255)                                                                                                                                                                                           cGAGGAGAACCGTCGTGCTAGAAGAATACCGTAAGCACGTAGCTGAGCGTGCCGCTGAGGGGATTGCGCCCAAACCCCTGGATGCAAACCAAATGGCCGCACTTGTAGAGCTGCTGAAAAACCCGCCCGCGGGCGAAGAAGAATTCCTGTTAg                                                                                                                                                                             <  1:414392/153‑1 (MQ=255)                                                                                                                                                                                           cGAGGAGAACCGTCGTGCTAGAAGAATACCGTAAGCACGTAGCTGAGCGTGCCGCTGAGGGGATTGCGCCCAAACCCCTGGATGCAAACCAAATGGCCGCACTTGTAGAGCTGCTGAAAAACCCGCCCGCGGGCGAAGAAGAATTCCTGTTAGATCTGTTAACCAACCGTGTTCCCCCAGGCGTCGATGAAGCCGCCTATGTCAAAGCAGGCTTCCGGGCTGCTATCGCGAAAGGCGAAGCCAAATCCCCTCTACTGACTCCGGAAAAAGCCAt                                                    >  1:330140/1‑274 (MQ=255)                                                                                                                                                                                             aggagAACCGTCGTGCTAGAAGAATACCGTAAGCACGTAGCTGAGCGTGCCGCTGAGGGGATTGCGCCCAAACCCCTGGATGCAAACCAAATGGCCGCACTTGTAGAGCTGCTGAAAAACCCGCCCGCGGGCGAAGAAGAATTCCGGTTAGCTCTGTTAACAAACCGTGTTCCCCCAGGCGTCGATGAAGCCGCCTATGTCAAAGCAGGCTTACTGGCTGCTCTCGCGNGAGGCAAAGCCAAACCCCCGCTGCTAACGCCATAAAAAACCaacaa                                                 >  2:452626/1‑271 (MQ=255)                                                                                                                                                                                               gagaACCGTCGTGCTAGAAGAAGACCGTAAGCACGTAGCTGAGCGTGCCGCTGAGGGGATTGCGCCCAAACCCCTGGATGCAAACCAAATNGCCGCACTTGTAGAGCTGCCGAAAAACCCGCCCGCGGGCGAAGAAGAATTCCTGTTAGATCTGTTAACCAACCGTGTTCCCCCAGGCGTCGATGAAGCCGCCTATGTCAAAGCAGGCTTCCTGGCTGCTATCGCGAAAGGCGAAGCCAAATCCCCTCTGCTGACTCCGGAAAAAGCCATCGaa                                                <  1:550182/274‑1 (MQ=255)                                                                                                                                                                                                       tcgtGCTAGAAGAATACCGTAAGCACGTAGCTGAGCGTGCCGCTGAGGGGATTGCGCCCAAACCCCTGGATGCAAACCAAATGGCCGCACTTGTAGAGCTGCTGAAAAACCCGCCCGCGGGCGAAGAAGAATTCCTGTTAGATCTGTTAACCAACCGTGTTCCCCCAGGCGTCGATGAAGCCGCCTATGTCAAAGCAGGCTTCCTGGCTGCTATCGCGAAAGGCCAAGCCAAATCCCCTCTGCTTACCGCGGAAAAAACCGGCGAAccgggcg                                         >  2:570394/1‑267 (MQ=255)                                                                                                                                                                                                       tcgtGCTAGAAGAATACCGTAAGCACGTAGCTGAGCGTGCCGCTGAGGGGATTGCGCCCAAACCCCTGGATGCAAACCAAANGGCCGCACNTGTAGAGCTGCTCAAAAACCCGCCCGCGGGCGAAGAAGAATTCCTGTTAGATCTGTTAACCAACCGTGTTCCCCCAGGCGTCGATGAAGCCGCCTATGTCAAAGCAGGCTTCCTGGCTGCTATCGCGAAAGGCGAAGCCAAATCCCCTCTGCTGACTCCGGAAAAAGCCATCGAACTGCTggg                                        <  1:464735/274‑1 (MQ=255)                                                                                                                                                                                                        atggctttttccggagtcagcagaggggatttggcttcgcctttcgcgatagcagccaggaagc                                                                                                                                                                                                                                                         >  2:321599‑M1/64‑64 (MQ=255)                                                                                                                                                                                                               gaagaaTACCGTAAGCACGTAGCTGAGCGTGCCGCTGAGGGGATTGCGCCCAAACCCCTGGATGCAAACCAAATGGCCGCACTTGTAGAGCTGCTGAAAAACCCGCCCGCGGGCGAAGAAGAATTCCTGTTa                                                                                                                                                                              >  1:689447/1‑132 (MQ=255)                                                                                                                                                                                                                   aaTACCGTAAGCACGTAGCTGAGCGTGCCGCTGAGGGGATTGCGCCCAAACCCCTGGATGCAAACCAAATGGCCGCACTTGTAGAGCTGCTGAAAAACCCGCCCGCGGGCGAAGAAGAATTCCTGTTAGATc                                                                                                                                                                          <  2:689438/132‑1 (MQ=255)                                                                                                                                                                                                                     tACCGTAAGCACGTAGCTGAGCGTGCCGCTGAGGGGATTGCGCCCAAACCCCTGGATGCAAACCAAATGGCCGCACTTGTa                                                                                                                                                                                                                           >  2:386536/1‑81 (MQ=255)                                                                                                                                                                                                                     gagtcagcagaggggatttggcttcgcctttcgcgatagcagccaggaagCCTGGATGCAAACCAAATGGCCGCACTTGTAGAGCTGCTGAAAAACCCGCCCGCGGGCgaagaag                                                                                                                                                                                         <  2:541547‑M1/65‑1 (MQ=255)                                                                                                                                                                                                                         gTAAGCACGTAGCTGAGCGTGCCGCTGAGGGGATTGCGCCCAAACCCCTGGATGCAAACCAAATGGCCGCACTTGTAGAgc                                                                                                                                                                                                                       <  1:386542/81‑1 (MQ=255)                                                                                                                                                                                                                         cagcagaggggatttggcttcgcctttcgcgatagcagccaggaagCCTGGATGCAAACCAAATGGCCGCACTTGTAGAGCTGCTGAAAAACCCGCCCGCGGGCGAAGAAGAAtt                                                                                                                                                                                     >  1:541556‑M1/47‑115 (MQ=255)                                                                                                                                                                                                                                 gTAGCTGAGCGTGCCGCTGAGGGGATTGCGCCCAAACCCCTGGATGCAAACCAAATGGCCGCACTTGTAGAGCTGCTGAAAAACCCGCCCGCGGGCGAAGAAGAATTCCTGTTa                                                                                                                                                                              >  2:520864/1‑114 (MQ=255)                                                                                                                                                                                                                                  tAGCTGAGCGTGCCGCTGAGGGGATTGCGCCCAAACCCCTGGATGCAAACCAAATGGCCGCACTTGTAGAGCTGCTGAAAAACCCGCCCGCGGGCGAAGAAGAATTCCTg                                                                                                                                                                                 >  1:453789/1‑110 (MQ=255)                                                                                                                                                                                                                                  tAGCTGAGCGTGCCGCTGAGGGGATTGCGCCCAAACCCCTGGATGCAAACCAAATGGCCGCACTTGTAGAGCTGCTGAAAAACCCGCCCGCGGGCGAAGAAGAATTCCTGTTAGATCTGTTAACCAACCGTGTTCCCCCAGGCGTCGATGAAGCCGCCTATGTCAAAGCAGGCTTCCTGGCTGCTATCGCGAAAGGCGAAGCCAAATCCCCTCTGCTGACTCCGGAAAAAGCCATCGAACTGCGGGGCACCATGCCGGGGGGTTACCAAAttaa             >  2:240435/1‑272 (MQ=255)                                                                                                                                                                                                                                     cTGAGCGTGCCGCTGAGGGGATTGCGCCCAAACCCCTGGATGCAAACCAAATGGCCGCACTTGTAGAGCTGCTGAAAAACCCGCCTGCGGGCGAAGAAGAATTCCTGTTAGATc                                                                                                                                                                          <  1:520871/114‑1 (MQ=255)                                                                                                                                                                                                                                      tGAGCGTGCCGCTGAGGGGATTGCGCCCAAACCCCTGGATGCAAACCAAATGGCCGCACTTGTAGAGCTGCTGAAAAACCCGCCCGCGGGCGAAGAAGAATTCCTGTTAg                                                                                                                                                                             <  2:453782/110‑1 (MQ=255)                                                                                                                                                                                                                                        aGCGTGCCGCTGAGGGGATTGCGCCCAAACCCCTGGATGCAAACCAAATGGCCGCACTTGTAGAGCTGCTGAAAAACCCGCCCGCGGGCGAAGAAGAATTCCTGTTa                                                                                                                                                                              >  2:488361/1‑107 (MQ=255)                                                                                                                                                                                                                                           gTGCCGCTGAGGGGATTGCGCCCAAACCCCTGGATGCAAACCAAATGGCCGCACTTGTAGAGCTGCTGAAAAACCCGCCCGCGGGCGAAGAAGAATTCCTGTTAGATCTGTTaa                                                                                                                                                                    >  1:597878/1‑114 (MQ=255)                                                                                                                                                                                                                                            tGCCGCTGAGGGGATTGCGCCCAAACCCCTGGATGCAAACCAAATGGCCGCACTTGTAGAGCTGCTGAAAAACCCGCCCGCGGTCGAAGAAGAATTCCTGTTAGATc                                                                                                                                                                          <  1:488368/107‑1 (MQ=255)                                                                                                                                                                                                                                            tGCCGCTGAGGGGATTGCGCACAAACCCCTGGATGCAAACCAAATGGCCGCACTTGGAGAGCTGCTGAAAAACCCGCCCGCGGGCGAAGAAGAATTCCTGTTAGATCTGTTAACCAACCGTGTTCCCCCAGGCGTCGATGAAGCCGCCTATGTCAAAGCAGGCTTCCTGGCTGCTATCGCGAAAGGCGAAGCCAAATCCCCTCTGCTGACTCCGGAAAAAGCCATCGAACTGCTGGGCACCATGCAGGGTGGTTACAACATTCATCCGCTGATCg  <  1:45130/275‑1 (MQ=255)                                                                                                                                                                                                                                             gCCGCTTTGGTGAGTGCGCCCAAACCCCTGGATGCAAACCAAACGGCCGCACTTGGAGAGCTGCTGAAAAACCCGCACGCGGGCGAAGAAGAAGTCCTGTTAGATCTGTTAACCAACCGTGTTCCCCCAGGCGTCGATGAAGCCGCCTATGTCAAAGCAGGCTTCCTGGCTGCTATCGCGAAAGGCGAAGCCAAATCCCCTCTGCTGACTCCGGAAAAAGACATCGAACTGCTGGGCACCATGCAGGGTGGTTa                      <  1:378054/254‑1 (MQ=255)                                                                                                                                                                                                                                              ccGCTGAGGGGATTGCGCCCAAACCCCTGGATGCAAACCAAATGGCCGCACTTGTAGAGCTGCTGAAAAACCCGCCCGCGGGCGAAGAAGAATTCCTGTTAGATCTGTTAACCAACCGTGTTCCCCCAGGCGTCGATGAAGCCGCCTATGTCAAAGCAGGCTTCCTGGCTGCTATCGCGAAAGGCGAAGCCaaa                                                                                 >  1:481300/1‑194 (MQ=255)                                                                                                                                                                                                                                               cGCTGAGGGGATTGCGCCCAAACCCCTGGATGCAAACCAAATGGCCGCACTTGTAGAGCTGCTGAAAAACCCGCCCGCGGGCGAAGAAGAATTCCTGTTAGATCTGTTaaccaa                                                                                                                                                                <  2:597869/114‑1 (MQ=255)                                                                                                                                                                                                                                                  tGAGGGGATTGCGCCCAAACCCCTGGATGCAAACCAAATGGCCGCACTTGTAGAGCTGCTGAAAAACCCGCCCGCGGGCGAAGAAGAATTCCTGTTAGATCTGTTAACCAACCGTGTTCCCCCAGGCGTCGATGAAGCCGCCTATGTCAAAGCAGGCTTCCTGGCTGCTATCGCGAAAGGCGAAGCCAAATccc                                                                             <  2:481293/194‑1 (MQ=255)                                                                                                                                                                                                                                                                       |                                                                                                                                                                                                                                                        AGGGAAACAATCTCTAGACCATCCTTAACGATTCAGCCACTTTTTTATGTTGCTTTTTTGTAAACAGATTAACACCTCGTCAAAATCCTGCTATTCTGCCCGTTGCGGTACTGGGCATTTACCCTACAAACTGCTGTCTCACAGGAGCGTGAAGAGAATCGCCTGCCGCACTATGACAATGAGAG‑CGAGGAGAACCGTCGTGCTAGAAGAATACCGTAAGCACGTAGCTGAGCGTGCCGCTGAGGGGATTGCGCCCAAACCCCTGGATGCAAACCAAATGGCCGCACTTGTAGAGCTGCTGAAAAACCCGCCCGCGGGCGAAGAAGAATTCCTGTTAGATCTGTTAACCAACCGTGTTCCCCCAGGCGTCGATGAAGCCGCCTATGTCAAAGCAGGCTTCCTGGCTGCTATCGCGAAAGGCGAAGCCAAATCCCCTCTGCTGACTCCGGAAAAAGCCATCGAACTGCTGGGCACCATGCAGGGTGGTTACAACATTCATCCGCTGATCG  >  CP009273/127903‑128411

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.