New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP009273	128164 =	59 (1.530)	4 (0.110)	4/306	NT	6.5%	coding (63/2598 nt)	acnB	bifunctional aconitate hydratase 2/2‑methylisocitrate dehydratase
	?	CP009273	128299 =	58 (1.550)					coding (198/2598 nt)	acnB	bifunctional aconitate hydratase 2/2‑methylisocitrate dehydratase

AACTGCTGTCTCACAGGAGCGTGAAGAGAATCGCCTGCCGCACTATGACAATGAGAG‑CGAGGAGAACCGTCGTGCTAGAAGAATACCGTAAGCACGTAGCTGAGCGTGCCGCTGAGGGGATTGCGCCCAAACCCCTGGATGCAAACCAAATGGCCGCACTTGTAGAGCTGCTGAAAAACCCGCCCGCGGGCGAAGAAGAATTCCTGTTAGATCTGTTAACCAACCGTGTTCCCCCAGGCGTCGATGAAGCCGCCTATGTCAAAGCAGGCTTCCTGGCTGCTATCGCGAAAGGCGAAGCCAAATCCCCTCTGCTGACTCCGGAAAAAGCCATCGAACTGCTGGGCACCATGCAGGGTGGTTACAACATTCATCCGCTGATCGACGCGCTGGATGATGCCAAACTGGCACCTATTGCTGCCAAAGCACTTTCTCACACGCTGCTGATGTTCGATAACTTCTATGACGTAGAAGAGAAAGCGAAAGCAGGCAACGAATATGCGAAGCAGGTTATGCAGTCCTGGGCGGATGCCGAATGGTT  >  CP009273/128031‑128568                                                                                                                                                                                                                                                                              |                                                                                                                                                                                                                                                                              aaCTGCTTTCGTACAGGAGCGTGAAGAGAATCGCCTGCCGCACTATGACAATGAGAG‑CGAGGAGAACCGTCGTGCTAGAAGAATACCGTAAGCACGTAGCTGAGCGTGCCGCTGAGGGGATTGCGCCCAAACCCCTGGATGCAAACCAAATGGCCGCACTTGTAGAGCTGCTGAAAAACCCGCCCGCGGGCGAAGAAGAATTCCTGTTAGATCTGTTAACCAACCGTGTTCCCCCAGGCGTCGATGAAGCCGCCTATGTCAAAGCAGGCTTCCt                                                                                                                                                                                                                                                                          <  1:131284/274‑1 (MQ=255)       tgTCTCACAGGAGCGTGAAGAGAATCGCCTGCCGCACTATGACAATGAGAG‑CGAGGAGAACCGTCGTGCTAGAAGAATACCGTAAGCACGTAGCTGAGCGTGCCGCTGAGGGGATTGCGCCCAAACCCCTGGATGCAAACCAAATGTACGCACTTGTANAGCTGCTGAAAAACCCGCCCGCGGGCGAAGAAGAATTCCTGTTAGATCTGTTAACCAACCGTGTTCCCCCAGGCGTCGATGAAGCCGCCTATGTCAAAGCAGGCTTCCTGgctgct                                                                                                                                                                                                                                                                   >  1:665281/1‑275 (MQ=255)         tctcACAGGAGCGTGAAGAGAATCGCCTGCCGCACTATGACAATGAGAG‑CGAGGAGAACCGTCGTGCTAGAAGAATACCGTAAGCACGTAGCTGAGCGTGCCGCTGAGGGGATTGCGCACAAACCCCTGGATGCAAACCAAATGGCCGCACTTGTAGAGCTGCTGAAAAACCCGCACGCGGGCGAAGACGAATTCATGTTAGATCTGTTAAACACCCGTGTTCCCCCAGGCGTCGAGGAAGCCGCCCAGGTCAAAGCAGGCTTCCTGGCTTCTa                                                                                                                                                                                                                                                                  >  2:254277/1‑274 (MQ=255)                     gTGAAGAGAATCGCCTGCCGCAATATGACAATGAGAG‑CGAGGAGAACCGTCGGGCTAGAAGAATACCGTAAGCACGTAGCTGAGCGTGCCGCTGAGTGGATTGCGCCCAAACCCCTGGATGCAAACCAAATGGCCGCACTTGTAGAGCTGCTGAAAAACCCGCCCGCGGGCGAAGAAGAATTCCTGTTAGATCTGTTAACCAACCGTGTTCCCCCAGGCGTCGATGAAGCCGCCTATGTCAAAGCAGGCTTCCTGGCTGCTATCGCGAAAGGCg                                                                                                                                                                                                                                                      <  1:359799/274‑1 (MQ=255)                      tGAAGAGAATCGCCTGCCGCACTATGACAATGAGAG‑CGAGGAGAACCGTCGTGCTAGAAGACTACCGTAAGCACGTATCTGAGCGTGCCGCTGAGGGGATTGCGCCCAAACCCCTGGATGCAAACCAAATGGCCGCACTTGTAGAGCTGCTGAAAAACCCGCCAGCGGGCGAAGAAGAATTCCNGTTAGATCTGTTAACCAACCGTGTTCCCCCAGGCGTCGATGAAGCCGCCTATGTCAAAGCAGGCTTCCGGGCTGCTATCGCGAAAgga                                                                                                                                                                                                                                                       >  1:549852/1‑271 (MQ=255)                       gAAGAGAATCGCCTGCAGCACTATGACAATGAGAG‑CGAGGAGAACCGTCGTGCTAGAAGAATACCGTAAGCACGTAGCTGAGCGTGCCGCTGAGGGGATTGCGCCCAAACCCCTGGATGCATACCAATTGGCCGCACTTGTAGAGCTGCTGAAAAACCCGCCCGCGGGCGAAGAAGAATTCCTGTTAGATCTGTTAACCAACCGTGTTCCCCCAGGCGTCGATGAAGCCGCCTATGTCAAAGCAGGCTTCCTGGCTGCTATCGCGAAAGGCGaa                                                                                                                                                                                                                                                    <  1:630583/274‑1 (MQ=255)                        aaGAGAATCGCCTGCCGCACTATGACAATGAGAG‑CGAGGAGAACCGTCGTGCTAGAAGAATACCGTAAGCACGTAGCTGAGCGTGCCGCTGAGGGGATTGCGCCCAAACCCCTGGATGCAAATCAAATAGCCGCACTTGTAGAGCTGCTGAAAAACCCGCCCGCGGGCGAAGAAGAATTCCTGTTAGATCTGTTAACCAACCGTGTTCCCCCAGGCGTCGATGAAGCCGCCTATGTCAAAGCAGGCTTCCTGGCTGCTATCGCGAAAGGCGAAGc                                                                                                                                                                                                                                                  <  1:637252/275‑1 (MQ=255)                         agagAATCGCCTGCCGCACTATGACAATGAGAG‑CGAGGAGAACCGTCGTGCTAGAAGAATACCGTAAGCACGTAGCTGAGCGTGCCGCTGAGGGGATTGCGCCCAAACCCCTGGATGCAAACCAAATGGCCGCACTTGTAGAGCTGCTGAAAAACCCGCCAGCGGGCGAAGAAGAATTCCTGTTAGATCTGTTAACCAACCGTGTTCCCCCAGGCGTCGATGAAGCCGCATATGTCAAAGCAGTCTTCNTTGCTGCTGTCGCGacaatctaaacc                                                                                                                                                                                                                                                 >  2:464728/1‑264 (MQ=255)                                cGCCTGCCGCACTATGACAATGAGAG‑CGAGGAGAACCGTCGTGCTAGAAGAATACCGTAAGCACGTAGCTGAGCGTGCCGCTGAGGGGATTGCGCCCAAACCCCTGGATGCAAACCAAATGGCCGCACTTGTAGAGCTGCTGAAAAACCCGCCCGCGGGCGAAGAAGAATTCCTGTTAGATCTGTTAACCAACCGTGTTCCCCCAGGCGTCGATGAAGCCGCCTATGTCAAAGCAGGCTTCCTGGCTGCTATCGCGAAAGGCGAAGCCAAAt                                                                                                                                                                                                                                             <  1:592263/272‑1 (MQ=255)                                            tATGACAATGAGAG‑CGAGGAGAACCGTCGTGCTAGAAGAATACCGTAAGCACGTAGCTGAGCGTGCCGCTGAGGGGATTGCGCCCAAACCCCTGGATGCAAACCAAATGGCCGCACTTGTAGAGCTGCTGAAAAACCCGCCCGCGGGCGAAGAAGAATTCCTGTTAGATCTGTTAACCAACCGTGTTCCCCCAGGCGTCGATGAAGCCGCCTATGTCAAAGCAGGCTTCCTGGCTGCTATCGCGAAAGGCGAAGCCAAATCCCCTCTGCTGACTc                                                                                                                                                                                                                              <  1:222872/275‑1 (MQ=255)                                            tATGACAATG‑GAGACGAGGATAACCGTCGTGCTAGAAGAATACCGTAAGCACCTAGCTGAGCGTGCCGCTGAGGGGATTGCGCCCAAACCCCTGGATGCAAACCAAATGGCCGCACTTGTAGAGCTGCTGAAAAACCCGCCCGCGGGCGAAGAAGAATTCCTGTTAGATCTGTTAACCAACCGTGTTCCCCCAGGCGTCGATGAAGCCGCCTATGTCAAAGCAGGCTTCCTGGCTGCTATCGCGAAAGGCGAAGCCAAATCCCCTCTGCTGACTc                                                                                                                                                                                                                              <  1:252573/275‑1 (MQ=255)                                                           cGAGGAGAACCGTCGTGCTAGAAGAATACCGTAAGCACGTAGCTGAGCGTGCCGCTGAGGGGATTGCGCCCAAACCCCTGGATGCAAACCAAATGGCCGCACTTGTAGAGCTGCTGAAAAACCCGCCCGCGGGCGAAGAAGAATTCCTGTTAGATCTGTTAACCAACCGTGTTCCCCCAGGCGTCGATGAAGCCGCCTATGTCAAAGCAGGCTTCCGGGCTGCTATCGCGAAAGGCGAAGCCAAATCCCCTCTACTGACTCCGGAAAAAGCCAt                                                                                                                                                                                                                 >  1:330140/1‑274 (MQ=255)                                                             aggagAACCGTCGTGCTAGAAGAATACCGTAAGCACGTAGCTGAGCGTGCCGCTGAGGGGATTGCGCCCAAACCCCTGGATGCAAACCAAATGGCCGCACTTGTAGAGCTGCTGAAAAACCCGCCCGCGGGCGAAGAAGAATTCCGGTTAGCTCTGTTAACAAACCGTGTTCCCCCAGGCGTCGATGAAGCCGCCTATGTCAAAGCAGGCTTACTGGCTGCTCTCGCGNGAGGCAAAGCCAAACCCCCGCTGCTAACGCCATAAAAAACCaacaa                                                                                                                                                                                                              >  2:452626/1‑271 (MQ=255)                                                               gagaACCGTCGTGCTAGAAGAAGACCGTAAGCACGTAGCTGAGCGTGCCGCTGAGGGGATTGCGCCCAAACCCCTGGATGCAAACCAAATNGCCGCACTTGTAGAGCTGCCGAAAAACCCGCCCGCGGGCGAAGAAGAATTCCTGTTAGATCTGTTAACCAACCGTGTTCCCCCAGGCGTCGATGAAGCCGCCTATGTCAAAGCAGGCTTCCTGGCTGCTATCGCGAAAGGCGAAGCCAAATCCCCTCTGCTGACTCCGGAAAAAGCCATCGaa                                                                                                                                                                                                             <  1:550182/274‑1 (MQ=255)                                                                       tcgtGCTAGAAGAATACCGTAAGCACGTAGCTGAGCGTGCCGCTGAGGGGATTGCGCCCAAACCCCTGGATGCAAACCAAATGGCCGCACTTGTAGAGCTGCTGAAAAACCCGCCCGCGGGCGAAGAAGAATTCCTGTTAGATCTGTTAACCAACCGTGTTCCCCCAGGCGTCGATGAAGCCGCCTATGTCAAAGCAGGCTTCCTGGCTGCTATCGCGAAAGGCCAAGCCAAATCCCCTCTGCTTACCGCGGAAAAAACCGGCGAAccgggcg                                                                                                                                                                                                      >  2:570394/1‑267 (MQ=255)                                                                       tcgtGCTAGAAGAATACCGTAAGCACGTAGCTGAGCGTGCCGCTGAGGGGATTGCGCCCAAACCCCTGGATGCAAACCAAANGGCCGCACNTGTAGAGCTGCTCAAAAACCCGCCCGCGGGCGAAGAAGAATTCCTGTTAGATCTGTTAACCAACCGTGTTCCCCCAGGCGTCGATGAAGCCGCCTATGTCAAAGCAGGCTTCCTGGCTGCTATCGCGAAAGGCGAAGCCAAATCCCCTCTGCTGACTCCGGAAAAAGCCATCGAACTGCTggg                                                                                                                                                                                                     <  1:464735/274‑1 (MQ=255)                                                                                                  tAGCTGAGCGTGCCGCTGAGGGGATTGCGCCCAAACCCCTGGATGCAAACCAAATGGCCGCACTTGTAGAGCTGCTGAAAAACCCGCCCGCGGGCGAAGAAGAATTCCTGTTAGATCTGTTAACCAACCGTGTTCCCCCAGGCGTCGATGAAGCCGCCTATGTCAAAGCAGGCTTCCTGGCTGCTATCGCGAAAGGCGAAGCCAAATCCCCTCTGCTGACTCCGGAAAAAGCCATCGAACTGCGGGGCACCATGCCGGGGGGTTACCAAAttaa                                                                                                                                                                          >  2:240435/1‑272 (MQ=255)                                                                                                            tGCCGCTGAGGGGATTGCGCACAAACCCCTGGATGCAAACCAAATGGCCGCACTTGGAGAGCTGCTGAAAAACCCGCCCGCGGGCGAAGAAGAATTCCTGTTAGATCTGTTAACCAACCGTGTTCCCCCAGGCGTCGATGAAGCCGCCTATGTCAAAGCAGGCTTCCTGGCTGCTATCGCGAAAGGCGAAGCCAAATCCCCTCTGCTGACTCCGGAAAAAGCCATCGAACTGCTGGGCACCATGCAGGGTGGTTACAACATTCATCCGCTGATCg                                                                                                                                                               <  1:45130/275‑1 (MQ=255)                                                                                                             gCCGCTTTGGTGAGTGCGCCCAAACCCCTGGATGCAAACCAAACGGCCGCACTTGGAGAGCTGCTGAAAAACCCGCACGCGGGCGAAGAAGAAGTCCTGTTAGATCTGTTAACCAACCGTGTTCCCCCAGGCGTCGATGAAGCCGCCTATGTCAAAGCAGGCTTCCTGGCTGCTATCGCGAAAGGCGAAGCCAAATCCCCTCTGCTGACTCCGGAAAAAGACATCGAACTGCTGGGCACCATGCAGGGTGGTTa                                                                                                                                                                                   <  1:378054/254‑1 (MQ=255)                                                                                                              ccGCTGAGGGGATTGCGCCCAAACCCCTGGATGCAAACCAAATGGCCGCACTTGTAGAGCTGCTGAAAAACCCGCCCGCGGGCGAAGAAGAATTCCTGTTAGATCTGTTAACCAACCGTGTTCCCCCAGGCGTCGATGAAGCCGCCTATGTCAAAGCAGGCTTCCTGGCTGCTATCGCGAAAGGCGAAGCCaaa                                                                                                                                                                                                                                              >  1:481300/1‑194 (MQ=255)                                                                                                                  tGAGGGGATTGCGCCCAAACCCCTGGATGCAAACCAAATGGCCGCACTTGTAGAGCTGCTGAAAAACCCGCCCGCGGGCGAAGAAGAATTCCTGTTAGATCTGTTAACCAACCGTGTTCCCCCAGGCGTCGATGAAGCCGCCTATGTCAAAGCAGGCTTCCTGGCTGCTATCGCGAAAGGCGAAGCCAAATccc                                                                                                                                                                                                                                          <  2:481293/194‑1 (MQ=255)                                                                                                                                                aaaCCAAATGGCCGCACTTGTAGAGCTGGTGAAAAACCCGCCCGCGGGCGAAGAAGAATTCCTGTTAGATCTGTTAACCAACCGTGTTCCCCCAGGCGTCGATGAAGCCGCCTATGTCAAAGCAGGCTTCCTGGCTGCTATCGCGAAAGGCGAAGCCAAATCCTCTCTGCTGACTCCGGAAAANGCCATCGAACTGCTGGGCACCATGCAGGGTGGTTACAACATTCATCCGCTGATCGACGCGCTGGATGATGCCAAACTGGCACCTATtgct                                                                                                                            >  1:551825/1‑274 (MQ=255)                                                                                                                                                       aTGGCCGCACTTGTAGAGCTGCTGAAAAACCCGCCCGCGGGCGAAGAAGAATTCCTGTTAGATCTGTTAACCAACCGTGTTCCCCCAGGCGTCGATGCAGCCGCCTATGTCAAAGCAGGCTTCCTGGCTGCTATCGCGAAAGGCGAAGCCAAATCCCCTCTGCTGACTCCGGAAAAAGCCATCGAACTGCTGGGCACCATGCAGGGTGGTTACAACATTCATCCGCTGATCGACGCGCTGGATGATGCCAAACTGGCACCTATTGCTGCCAAAGc                                                                                                                    <  1:405055/275‑1 (MQ=255)                                                                                                                                                         ggCCGCACTTGTAGAGCTGCTGAAAAACCCGCCCGCGGGCGAAGAAGAATTCCTGTTAGATCTGTTAACCAACCGTGTTCCCCCAGGCGTCGATGAAGCCGCCTATGTCAAAGCAGGCTTCCTGGCTGCTATCGCGAAAGGCGAAGCCAAATCCCCTCTGCTGACTCCGGAAAAAGCCATCGAACTGCTGGGCACCATGCAGGGTGGTTACAACATTCATCCGCTGATCGACGCGCTGGATGATGCCAAACTGGCACCTATTGCTGCCAAAGCa                                                                                                                   <  1:240440/274‑1 (MQ=255)                                                                                                                                                              cACTTGTAGAGCTGCTGAAAAACCCGCCCGCGGGCGAAGAAGAATTCCTGTTAGATCTGTTAACCAACCGTGTTCCCCCAGGCGTCGATGAAGCCGCCTATGTCAAAGCAGGCTTCCTGGCTGCTATCGCGAAAGGCGAAGCCAAATCCCCTCTGCTGACTCCTGAAAAAGCCATCGAACTGCNGGGCACCATGCAGGGTGGTTACAACATTCATCCGCTGATCGACGCGCTGGATGATGCCAAACTGGCACCTATTGCTGCCAAAGCACTTtct                                                                                                             >  1:558589/1‑275 (MQ=255)                                                                                                                                                                  tGTAGAGCTGCTGAAAAACCCGCCCGCGGGCGAAGAAGAATTCCTGTTAGATCTGTTAACCAACCGTGTTCCCCCAGGCGTCGATGAAGCCGCCTATGTCAAAGCAGGCTTCCTGGCTGCTATCGCGAAAGGCGAAGCCAAATCCCCTCTGCTGACTCCGGAAAAAGCCATCGAACTGCTGGGCACCATGCAGGGTGGTTACAACATTCATCCGCTGATCGACGCGCTGGATGATGCCAAACTGGCACCTATTGCTGCCAAAGCACTTTCTcaca                                                                                                         <  1:254282/275‑1 (MQ=255)                                                                                                                                                                        gggggaacacggttggttaacagatctaacaggaattcttcttcgcccgcgggcgggtttttcagcagctctacaagtgcggccatttggtttgcatccaggCTTCCTGGCTGCTATCGCGAAAGGCGAAGCCAAATCCCCTCTGCTGCCTCCGGAAAAAGCCATCGAACTGCTGGGCACCATGCAgg                                                                                                                                                                                          >  2:5744‑M2/103‑188 (MQ=255)                                                                                                                                                                         ctgctgAAAAACCCGCCCGCGGGCGAAGAAGAATTCCTGTTAGATCTGTTAACCAACCGTGTTCCCCCAGGCGTCGATGAAGCCGCCTATGTCAAAGCAGGCTTCCTGGCTGCTATCGCGAAAGGCGAAGCCAAATCCCCTCTGCTGACTCCTGAAAAAGCCATCGAACTGCTGGGCACCATGCAGGGTTGTTACGACATTCATCCGCTGATCGACGCGCTGGATGATGCCAAACTGGCACCTATTGCTGCCAAAGAACTTTCTCACACgctgc                                                                                                   >  1:690569/1‑274 (MQ=255)                                                                                                                                                                         ctgctgAAAAACCCGCCCGCGGGCGAAGAAGAATTCCTGTTAGATCTGTTAACCAACCGTGTTCCCCCAGGCGTCGATGAAGCCGCCTATGTCAAAGCAGGCTTCCTGGCTGCTATCGCGAAAGGCGAAGCCAAATCCCCTCTGCTGACTCCGGAAAAAGCCATCGAACTGCTGGGCACCATGCAGGGTGGTTACAACATTCATCCGCTGATCGACGCGCTGGATGATGCCAAACTGGCACCTATTGCTGcc                                                                                                                         >  1:84682/1‑252 (MQ=255)                                                                                                                                                                         ctgctgAAAAACCCGCCCGCGGGCGAAGAAGAATTCCTGTTAGATCTGTTAACCAACCGTGTTCCCCCAGGCGTCGATGAAGCCGCCTATGTCAAAGCAGGCTTCCTGGCTGCTATCGCGAAAGGCGAAGCCAAATCCCCTCTGCTGACTCCGGAAAAAGCCATCGAACTGCTGGGCACCATGCAGGGTGGTTACAACATTCATCCGCTGATCGACGCGCTGGATGATGCCAAACTGGCACCTATTGCTGCCAAAGCACTTTCTCACACgctgct                                                                                                  >  1:322340/1‑275 (MQ=255)                                                                                                                                                                           gctgAAAAACCCGCCCGCGGGCGAAGAAGAATTCCTGTTAGATCTGTTACCCAACCGTGTTCCCCCAGGCGCCGATGAAGCCGCCTATGTCCAAGCAGGCTTCCTGGCTGCTATCGCGAAAGGCGAACCCAAATCCCCTCTGCTGACTCCGGCAAAAGCCATCGAACTGCTGGGCCCCATACAGGGTGGTTACAACATTCATCCGCTGATCGACCCCCTGGATCATCCCAAACTCGCACCAATACCTGCCAAACTACTTTAGCTCACgcttctc                                                                                                 >  2:129950/1‑273 (MQ=255)                                                                                                                                                                           gctgAAAAACCCGCCCGCGGGCGAAGAAGAATTCCTGTTAGATCTGTTAACCAACCGTGTTCCCCCAGGCGTCGATGAAGCCGCCTATGTCAAAGCAGGCTTCCTGGCTGCTATc                                                                                                                                                                                                                                                                >  1:290040/1‑115 (MQ=255)                                                                                                                                                                           gctgAAAAACCCGCCCGCGGGCGAAGAAGAATTCCTGTTAGATCTGTTAACCAACCGTGTTCCCCCAGGCGTCGATGAAGCCGCCTATGTCAAAGCAGGCTTCCTGGCTGCTATCGCGAAAGGCGAAGCCAAATCCCCTCTGCTGACTCCGGAAAAAGCCATCGAACTGCTGGGCACCATGCAGGGTGGTTACAACATTCATCCGCTGATCGACGCGCTGGATGATGCCAAACTGGCACCTATTTCTTCCAAAGCAATTtcctccccccttctt                                                                                                 >  2:334496/1‑261 (MQ=255)                                                                                                                                                                            gaacacggttggttaacagatctaacaggaattcttcttcgcccgcgggcgggtttttcagcagctctacaagtgcggccatttggtttgcatccaggCTTCCTGGCTGCTATCGCGAAAGGCGAAGCCAAATCCCCTCTGCTGACTCCGGAAAAAGCCATCGAACTGCTGGGCACCATGCAGggtgg                                                                                                                                                                                      <  1:5744‑M2/90‑1 (MQ=255)                                                                                                                                                                            ctgAAAAACCCGCCCGCGGGCGAAGAAGAATTCCTGTTAGATCTGTTAACCAACCGTGTTCCCCCAGGCGTCGATGAAGCCGCCTATGTCAAAGCAGGCTTCCTGGCTGCTATCGCGAAAGGCGAAGCCAAATCCCCTCTGCTGACTCCGGAAAAAGCCATCGAACTGCTGGGCACCATGCAGGGTGGTTACAACATTCATCCGCTGATCGACGCGCTGGATGATGCCAAACTGGCACCTATTGCTGCCAAAACACTTTCTCACACGctgctgct                                                                                               >  1:378620/1‑273 (MQ=255)                                                                                                                                                                             tgAAAAACCCGCCCGCGGGCGAAGAATAATTCCTGTTAGATCTGTTAACCAACCGTGTTCCCCCAGGCGTCGATGAAGCCGCCTATGTCAAAGCAGGCTTCCTGGCTGCTATCGCGAAAGGCGAAGCCAAATCCCCTCTGCTGACTCCGGAAAAAGCCATCGAACTGCTGGGCACCATGCAGGGTGGTTACAACATTCATCCGCTGATCGACGCGCTGGATGATGCCAAACTGGCACCTATTGCTGCCAAAg                                                                                                                     <  2:84681/252‑1 (MQ=255)                                                                                                                                                                               aaaaaCCCGCCCGCGGGCGAAGAAGAATTCCTGTTAGATCTGTTAACCAACCGTGTTCCCCCAGGCGTCGATGAAGCCGCCTATGTCAAAGCAGGCTTCCTGGCTGCTATCGCGa                                                                                                                                                                                                                                                            <  2:290034/115‑1 (MQ=255)                                                                                                                                                                                      cgcccgcGGGCGAAGAAGAATTCCTGTTAGATCTGTTAACCAACCGTGTTCCCCCAGGCGTCGATGAAGCCGCCTATGTCAAAGCAGGCTTCCTGGCTGCTATCGCGAAAGGCGAAGCCAAATCCCCTCTGCTGACTCCGGAAAAAGCCATCGAACTGCTGGGCACCATGCAGGGTGGTTACAACATTCATCCGCTGATCGACGCGCTGGATGATGCCAAACTGGCACCTATTGCTGCCAAAGCACTTTCTCACACGCTGCTGATGTTCGAt                                                                                        <  2:322334/272‑1 (MQ=255)                                                                                                                                                                                                        aaTTCCTGTTAGATCTGTTAACCAACCGTGTTCCCCCAGGCGTCGATGAAGCCGCCTATGTCAAAGCAGGCTTCCTGGCTGCTATCGCGAAAGGCGAAGCCAAATCCCCTCTGCTGACTCCGGAAAAAGCCATCGAACTGCTGGGCACCATGCAGGGTGGTTACAACATTCATCCGCTGATCGACGCGCTGGATGATGCCAAAc                                                                                                                                          >  1:566737/1‑204 (MQ=255)                                                                                                                                                                                                         aattcttcttcgcccgcgggcgggtttttcagcagctctacaagtgcggccatttggtttgcatccaggCTTCCTGGCTGCTATCGCGAAAGGCGAAGCCAAATCCCCTctgctg                                                                                                                                                                                                                                  >  1:541556‑M2/70‑115 (MQ=255)                                                                                                                                                                                                            ccTGTTAGATCTGTTAACCAACCGTGTTCCCCCAGGCGTCGATGAAGCCGCCTATGTCAAAGCAGGCTTCCTGGCTGCTATCGCGAAAGGCGAAGCCAAATCCCCTCTGCTGACTCCGGAAAAAGCCATCGAACTGCTGGGCACCATGCAGGGTGGTTACAACATTCATCCGCTGATCGACGCGCTGGATGATGCCAAACTGGc                                                                                                                                      <  2:566728/204‑1 (MQ=255)                                                                                                                                                                                                             cttcttcgcccgcgggcgggtttttcagcagctctacaagtgcggccatttggtttgcatccaggCTTCCTGGCTGCTATCGCGAAAGGCGAAGCCAAATCCCCTCTGCTGACTc                                                                                                                                                                                                                              <  2:541547‑M2/50‑1 (MQ=255)                                                                                                                                                                                                                                 ccGTGTTCCCCCAGGCGTCGATGAAGCCGCCTATGTCAAAGCAGGCTTCCTGGCTGCTATCGCGAAAGGCGAAGCCAAATCCCCTCTGCTGACTCCGGAAAAAGCCATCGAACTGCTGGGCACCATGCAGGGTGGTTACAACATTCATCCGCTGATCGACGCGCTGGATGATGCCAAACTGGCACCTATtgctg                                                                                                                           >  2:606204/1‑194 (MQ=255)                                                                                                                                                                                                                                   gtgtTCCCCCAGGCGTCGATGAAGCCGCCTATGTCAAAGCAGGCTTCCTGGCTGCTATCGCGAAAGGCGAAGCCAAATCCCctc                                                                                                                                                                                                                                       >  1:106717/1‑84 (MQ=255)                                                                                                                                                                                                                                   gtgtTCCCCCAGGCGTCGATGAAGCCGCCTATGTCAAAGCAGGCTTCCTGGCTGCTATCGCGAAAGGCGAAGCCAAATCCCCTCTGCTGACTCCGGAAAAAGCCATCGAACTGCTGGGCACCATGCAGGGTGGTTACAACATTCATCCGCTGATCGACGCGCTGGATGATGCCAAACTGGCACCTATTGCTGCCAAAGCACGTTCTCACACGCTGCTGATGCTCGAAAACTTCTATGACGGAGAAGAGAAAGCGAAAGCAGGGAAGGAACATg                                          >  2:325874/1‑273 (MQ=255)                                                                                                                                                                                                                                     gtTCCCCCAGGCGTCGATGAAGCCGCCTTTGTCAAAGCAGGCTTCCTGGCTGCTATCGCGAAAGGCGAAGCCAAATCCCCTCTGCTGACTCCGGAAAAAGCCATCGAACTGCTGGGCACCATGCATGGTGGTTACAACATTCATCCGCTGATCGACGCGCTGGATGATGCCAAACTGGCACCTATTGCTGCCAAAGCACTTTCTCACACGCTGCTGATGTTCGATAACTTCTATGACGTAGAAGAGAAAGCGAAAGCAGGCAACGAATATGCGaa                                      <  1:570403/275‑1 (MQ=255)                                                                                                                                                                                                                                     gtTCCCCCAGGCGTCGATGAAGCCGCCTATGTCAAAGCAGGCTTCCTGGCTGCTCTCGCGAAAGGCGAAGCCAAATCCCCTCTGCTGACTCCGGAAAAAGCCATCGAACTGCTGGGCACCATGCAGGGTGGTTACAACATTCATCCGCTGATCGACGCGCTGGATGATGCCAAACTGGCACCTATTGCTGCCaa                                                                                                                       <  1:606213/194‑1 (MQ=255)                                                                                                                                                                                                                                       tCCCCCAGGCGTCGATGAAGCCGCCTATGTCAAAGCAGGCTTCCTGGCTGCTATCGCGAAAGGCGAAGCCAAATCCCCTctgct                                                                                                                                                                                                                                   <  2:106716/84‑1 (MQ=255)                                                                                                                                                                                                                                         ccccAGGCGTCGATGAAGCCGCCTATGTCAAAGCAGGCTTCCTGGCTGCTATCGCGAAAGGCGAAGCCAAATCCCCTCTGCTGACTCCGGAAAAAGCCATCGAACTGCTGGGCACCATGCAGGGTGGTTACAACATTCATCCGCTGATCGACGCGCTGGATGATGCCAAACTGGCACCTa                                                                                                                                 >  2:584409/1‑180 (MQ=255)                                                                                                                                                                                                                                          gaaaggaggggATGAAGACTCCTACGCCAAAGCACGCGTCCCGTCTGCTATCGCGAAAGGCGAAGACAAATCCCCCCTGCTGACTCAGGAAAAAGCCATCGAACTGCTGGGCACCATGCAGGGTGGGTACAACATTCATCCGCTGATCGACGCGCTGGATGATGCCAAACTGGCAACTATTGCTGCCAAAGCACTTTCTCACACGCTGCTGATGTTCGATAACTTCTATGACGTAGAAGAGAAAGCGAAAGCAGGCAACGAATATGCGaa                                      <  2:378614/260‑1 (MQ=255)                                                                                                                                                                                                                                          cgtagtcGTCGATGGAGCCGCATATGTCAAAGCAGGCTTCCTGGCTGCTATCGCGAAAGGCGAAGCCAAATCCCCACTGCTGACTCCGGAAAAAGCCATCGAACTGCTGGGCACCATGCAGGGTGGTTACAACATTCATCCGCTGATCGACGCGCTGGATGATGCCAAACTGGCACCTATTGCTGCCAAAGCACTTTCTCACACGCTGCTGATGTTCGATAACTTCTAGGACGTAGAAGAGAAAGCGAAAGCAGGCAACGAATATGCGAAGCAgg                                 <  1:129951/269‑1 (MQ=255)                                                                                                                                                                                                                                           ccAGGCGTCGATGAAGCCGCCTATGTCAAAGCAGGCTTCCTGGCTGCTATCGCGAAAGGCGAAGCCAAATCCCCTCTGCTGACTCCGGAAAAAGCCATCGAACTGCTGGGCACCATGCAGGGTGGTTACAACATTCATCCGCTGATCGACGCGCTGGATGATGCCAAACTGGCACCTATTGCTGCCAAAGCACTTTCTCACACGCTGCTGATGTTCGATAACt                                                                                    >  1:1625/1‑223 (MQ=255)                                                                                                                                                                                                                                             aGGCGTCGATGAAGCCGCCTATGTCAAAGCAGGCTTCCTGGCTGCTATCGCGAAAGGCGAAGCCAAATCCCCTCTGCTGACTCCGGAAAAAGCCATCGAACTGCTGGGCACCATGCAGGGTGGTTACAACATTCATCCGCTGATCGACGCGCTGGATGATGCCAAACTGGCACCTATtgc                                                                                                                             <  1:584418/180‑1 (MQ=255)                                                                                                                                                                                                                                               gCGTCGATGAAGCCGCCTATGTCAAAGCAGGCTTCCTGGCTGCTATCGCGAAAGGCGAAGCCAAATCCCCTCTGCTGACTCCGGAAAAAGCCATCGAACTGCTGGGCACCATGCAGGGTGGTTACAACATTCATCCGCTGATCGACGCGCTGGATGATGCCAAACTGGCACCTATTGCTGCCAAAGCACTTTCTCACACGCTGCTGATGTTCGATAACTTCTa                                                                                <  2:1625/223‑1 (MQ=255)                                                                                                                                                                                                                                                  tCGATGAAGCCGCCTATGTCAAAGCAGGCTTCCTGGCTGCTATCGCGAAAGGCGAAGcc                                                                                                                                                                                                                                                 >  2:25480/1‑59 (MQ=255)                                                                                                                                                                                                                                                  tCGATGAAGCCGCCTATGTCAAAGCAGGCTTCCTGGCTGCTATCGCGAAAGGCGAAGCCAAATCCCCTCTGCTGACTCCGGaaaaa                                                                                                                                                                                                                      >  1:631319/1‑86 (MQ=255)                                                                                                                                                                                                                                                   cGATGAAGCCGCCTATGTCAAAGCAGGCTTCCTGGCTGCTATCGCGAAAGGCGAAGCCaaa                                                                                                                                                                                                                                              >  1:193550/1‑61 (MQ=255)                                                                                                                                                                                                                                                      tGAAGCCGCCTATGTCAAAGCAGGCTTCCTGGCTGCTATCGCGAAAGGCGAAGCCAAAt                                                                                                                                                                                                                                             <  1:25480/59‑1 (MQ=255)                                                                                                                                                                                                                                                      tGAAGCCGCCTATGTCAAAGCAGGCTTCCTGGCTGCTATCGCGAAAGGCGAAGCCAAATCCCCTCTGCTGACTCCGGAAAAAGCCa                                                                                                                                                                                                                  <  2:631310/86‑1 (MQ=255)                                                                                                                                                                                                                                                       gAAGCCGCCTATGTCAAAGCAGGCTTCCTGGCTGCTATCGCGAAAGGCGAAGCCAAATccc                                                                                                                                                                                                                                          <  2:193547/61‑1 (MQ=255)                                                                                                                                                                                                                                                         aGCCGCCTATGTCAAAGCAGGCTTTCTTGCTGCTATAGCGAAAGGCGAAGCCAAATCCCCTCTGCTGACTCCGGAAAAAGCCATCGAACTGCTGGGCACCATGCAGGGTGGTTACAACATTCATCCGCTGATCGACGCGCTGGATGATGCCAAACTGGCACCTATTGCTGCCAAAGCACTTTCTCACACGCTGCTGATGTTAGATAACTTCTATGACGTAGAAGAGAAAGCGAAAGCAGGCAACGAATATGCGAAGCAGGTTATGCAGTCCTggg                  >  1:427533/1‑275 (MQ=255)                                                                                                                                                                                                                                                                    tCAAAGCAGGCTTCCTGGCTGCTATCGCGAAAGGCGAAGCCAAATCCCCTCTGCTGACTCCGGAAAAAGCCATCGAACTGCTGGGCACCATGCAGGGTGGTTACAACATTCATCCGCTGATCGACGCGCTGGATGATGCCAAACTGGCACCTATTGCTGCCaa                                                                                                                       >  2:448715/1‑163 (MQ=255)                                                                                                                                                                                                                                                                       aaGCAGGCTTCCTGGCTGCTATCGCGAAAGGCGAAGCCAAATCCCCTCTGCTGACTCCGGAAAAAGCCATCGAACTGCTGGGCACCATGCAGGGTGGTTACAACATTCATCCGCTGATCGACGCGCTGGATGATGCCAAACTGGCACCTATTGCTGCCAAAGCACTTTCTCACACgctg                                                                                                    >  2:509095/1‑179 (MQ=255)                                                                                                                                                                                                                                                                        aGCAGGCTTCCTGGCTGCTATCGCGAAAGGCGAAGCCAAATCCCCTCTGCTGACTCCGGAAAAAGCCATCGAACTGCTGGGCACCATGCAGGGTGGTTACAACATTCATCCGCTGATCGACGCGCTGGATGATGCCAAACTGGCACCTATTGCTGCCaa                                                                                                                       >  1:244519/1‑159 (MQ=255)                                                                                                                                                                                                                                                                        aGCAGGCTTCCTGGCTGCTATCGCGAAAGGCGAAGCCAAATCCCCTCTGCTGACTCCGGAAAAAGCCATCGAACTGCTGGGCACCATGCAGGGTGGTTACAACATTCATCCGCTGATCGACGCGCTGGATGATGCCAAACTGGCACCTATTGCTGCCAAAGCa                                                                                                                   <  1:448722/163‑1 (MQ=255)                                                                                                                                                                                                                                                                         gCAGGCTTCCTGGCTGCTATCGCGAAAGGCGAAGCCAAATCCCCTCTGCTGACTCCGGAAAAAGCCATCGAACTGCTGGGCACCATGCAGGGTGGTTACAACATTCATCCGCTGATCGACGCGCTGGATGATGCCAAACTGGCACCTATTGCTGCCAAAGCACTTTCTCGCACGCTGCTGATGTTCGATAACTTCTATGACGTAGAAGCGAAAGCGAAAGCAGGAAACGACTATGCGAAGCAGGTTATGCAGTCCTGGGCGGATGCCGAATGGtt  >  1:282645/1‑275 (MQ=255)                                                                                                                                                                                                                                                                           aggCTTCCTGGCTGCTATCGCGAAAGGCGAAGCCAAATCCCCTCTGCTGACTCCGGAAAAAGCCATCGAACTGCTGGGCACCATGCAGGGTGGTTACAACATTCATCCGCTGATCGACGCGCTGGATGATGCCAAACTGGCACCTATTGCTGCCCAAGCACTTTCTCACACGCTGCTGa                                                                                                <  1:509102‑M2/176‑1 (MQ=255)                                                                                                                                                                                                                                                                            ggCTTCCTGGCTGCTATCGCGAAAGGCGAAGCCAAATCCCCTCTGCTGACTCCGGAAAAAGCCATCGAACTGCTGGGCACCATGCAGGGTGGTTACAACATTCATCCGCTGa                                                                                                                                                                  >  2:394363‑M2/3‑112 (MQ=255)                                                                                                                                                                                                                                                                            ggCTTCCTGGCTGCTATCGCGAAAGGCGAAGCCAAATCCCCTCTGCTGACTCCGGAAAAAGCCATCGAACTGCTGGGCACCATGCAGGGTGGTTACAACATTCATCCGCTGATCGACGCGCTGGATGATGCCAAACTGGCACCTATTGCTGCCAAAGCa                                                                                                                   <  2:244514‑M2/157‑1 (MQ=255)                                                                                                                                                                                                                                                                             gCTTCCTGGCTGCTATCGCGAAAGGCGAAGCCAAATCCCCTCTGCTGACTCCGGAAAAAGCCAt                                                                                                                                                                                                                 >  2:321599‑M2/2‑64 (MQ=255)                                                                                                                                                                                                                                                                             gCTTCCTGGCTGCTATCGCGAAAGGCGAAGCCAAATCCCCTCTGCTGACTCCGGAAAAAGCCATCGAACTGCTGGGCACCATGCAGGGTGGTTACAACATTCATCCGCTGATCGACGCGCTGGATGATGCCAAACTGGCACCTATTGCTGCCAAAGCACttt                                                                                                               >  2:417584‑M2/2‑162 (MQ=255)                                                                                                                                                                                                                                                                              |                                                                                                                                                                                                                                                                              AACTGCTGTCTCACAGGAGCGTGAAGAGAATCGCCTGCCGCACTATGACAATGAGAG‑CGAGGAGAACCGTCGTGCTAGAAGAATACCGTAAGCACGTAGCTGAGCGTGCCGCTGAGGGGATTGCGCCCAAACCCCTGGATGCAAACCAAATGGCCGCACTTGTAGAGCTGCTGAAAAACCCGCCCGCGGGCGAAGAAGAATTCCTGTTAGATCTGTTAACCAACCGTGTTCCCCCAGGCGTCGATGAAGCCGCCTATGTCAAAGCAGGCTTCCTGGCTGCTATCGCGAAAGGCGAAGCCAAATCCCCTCTGCTGACTCCGGAAAAAGCCATCGAACTGCTGGGCACCATGCAGGGTGGTTACAACATTCATCCGCTGATCGACGCGCTGGATGATGCCAAACTGGCACCTATTGCTGCCAAAGCACTTTCTCACACGCTGCTGATGTTCGATAACTTCTATGACGTAGAAGAGAAAGCGAAAGCAGGCAACGAATATGCGAAGCAGGTTATGCAGTCCTGGGCGGATGCCGAATGGTT  >  CP009273/128031‑128568

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.