New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | CP009273 | 256752 = | 29 (0.750) | 8 (0.220) | 4/292 | NT | 24.6% | coding (654/1104 nt) | proB | gamma‑glutamate kinase |
? | CP009273 | 257524 = | 22 (0.620) | coding (311/1254 nt) | proA | gamma‑glutamylphosphate reductase |
CGTTCCGGTAATCAATGAGAACGATGCTGTCGCTACGGCAGAGATTAAGGTCGGCGATAACGATAACCTTTCTGCGCTGGCGGCGATTCTTGCGGGTGCCGATAAACTGTTGCTGCTGACCGATCAAAAAGGTTTGTATACCGCTGACCCGCGCAGCAATCCGCAGGCAGAACTGATTAAAGATGTTTACGGCATTGATGACGCACTGCGCGCGATTGCCGGTGACAGCGTTTCAGGCCTCGGAACTGGCGGCATGAGTACCAAATTGCAGGCCGCTGACGTGGCTTGCCGTGCGGGTATCGACACCATTATTGCCGCGGGCAGCAAGCCGGGCGTTATTGGTGATGTGATGGAAGGCATTTCCGTCGGTACGCTGTTCCATGCCCAGGCGACTCCGCTTGAAAACCGTAAACGCTGGATTTTCGGTGCGCCGCCGGCGGGTGAAATCACGGTAGATGAAGGGGCAACTGCCGCCATTCTGGAACGCGGCAGCTCCCTGTTGCCGAAAGGCAT > CP009273/256485‑256997 | acttatccctactacgcttttctcggacaagccaacggccatcattaccaatcgcctccccgcgacccgccggtaagccgcaggatttcagggcgtcaggcatcaccgccaccgttgcagcggtagtgcgacacgtttcttggccaccgcgcaggatcaccccattaccggttttcaggcacagcgaagcgacatcaaccgtcacgctcgggcgcgcttcataaatcacgccaataacccccagcggtacgcgacgacgctcaagacGCAGGCCg > 2:302524‑M1/268‑275 (MQ=255) atccatacgcagcatttcactgaccagcgcacggtcaggattatcaatcgcctgcacggcacccgccggtaagccgcaggatttcagggcgtcctgaatcaccgccaccgttgcagcgttagtgcgacacgtttctttgccaccgcgcaggatcaccgcattaccggttttcaggcacagcgacgcgacatcaaccgtcacgttcgggcgcgctacataaatcacgccaataacccacagcggaacacgccgacgctcaacaaNCAGGCCTCTg < 2:67953‑M1/11‑1 (MQ=255) gTAATCAATGAGAACGATGCTGTCGCTACGGCAGAGATTAAGGTCGGCGATAACGATAACCTTTCTGCGCTGGCGGCGATTCTTGCGGGTGCCGATAAACTGTTGCTGCTGACCGATCAAAAAGGTTTGTATACCGCTGACCCGCGCAGCAATCCGCAGGCAGAACTGATTAAAGATGTTTACGGCATTGATGACGCACTGCGCGCGATTGCCGGTGACAGCGTTTCAGGCCTCGGAACTGGCGGCATGAGTACCAAATTGCAg > 1:651046/1‑264 (MQ=255) tCAATGAGAACGATGCTGTCGCTACGGCAGAGATTAAGGTCGGCGATAACGATAACCTTTCTGCGCTGGCGGCGATTCTTGCGGGTGCCGATAAACTGTTGCTGCTGACCGATCAAAAAGGTTTGTATACCGCTGACCCGCGCAGCAATCCGCAGGCAGAACTGATTAAAGATGTTTACGGCATTGATGACGCACTGCGCGCGATTGCCGGTGACAGCGTTTCAGGCCTCGGAACTGGCGGCATGAGTACCAAATTGCAGGCCg < 2:651037/264‑1 (MQ=255) gCGATAACGATAACCTTTCTGCGCTGGCGGCGATTCTTGCGGGTGCCGATAAACTGTTGCTGCTGACCGATCAAAAAGGTTTGTATACCGCTGACCCGCGCAGCAATCCGCAGGCAGAACTGATTAAAGATGTTTACGGCATTGATGACGCACTGCGCGCGATTGCCGGTGACAGCGTTTCAGGCCTCGGAACTGGCGGCATGAGTACCAAATTGCAGGCAGCTGACGTGGCTTGCCGTGCGGGTATCGAAACCATTATTGCCGCGGGCCGCAAg > 1:98073/1‑275 (MQ=255) gataacCTTTCTGCGCTGGCGGCGATTCTTGCGGGTGCCGATAAACTGTTGCTGCTGACCGATCAAAAAGGTTTGTATACCGCTGACCCGCNCAGCAATCCGCAGGCAGAACTGATTAAAGATGTTTACGGCATTGATGACGCACTGCGCGCGATTGCCGGTGACAGCGTTTCAGGCCTCGGAACTGGCGGCATGAGTACCAAATTGCAGGCCGCTGACGTGGCTTGCCGTGCGGGTATCGACACCATTATCGCCGCGGGCAGCAAGCCGGGCGt < 1:505114/275‑1 (MQ=255) tGGCGGCGATTCTTGCGGGTGCCGATAAACTGTTGCTGCTGACCGATCAAAAAGGTTTGTATACCGCTGACCCGCGCAGCAATCCGCAGGCAGAACTGATTAAAGATGTTTACGGCATTGATGACGCACTGCGCGCGATTGCCGGTGACAGCGTTTCAGGCCTCGGAACTGGCGGCATGAGTACCAAATTGCAGGCCGCTGACGTGGCtttc > 2:149579/1‑210 (MQ=255) ggcgATTCTTGCGGGTGCCGATAAACTGTTGCTGCTGACCGATCAAAAAGGTTTGTATACCGCTGACCCGCGCAGCAATCCGCAGGCAGAACTGATTAAAGATGTTTACGGCATTGATGACGCACTGCGCGCGATTGCCGGTGACAGCGTTTCAGGCCTCGGAACTGGCGGCATGAGTACCAAATTGCAGGCCGCTGACGTGGCTTGCCGTg < 1:149580/212‑1 (MQ=255) ggcgtcctgaatcacagccaccgctgcagggttagtgcgacacgtttctttgccaccgcgcaggatcaccgcattaccggttttcaggcacagcgaagcgacatcaaccgtcacgttcgggcgcgcttcataaatcacgccaataacccccagcggtacgcgacgacgctcacgacGCAg < 1:490974‑M1/4‑1 (MQ=255) ttGCTGCTGACCGATCAAAAAGGTTTGTAGACCGCTGACCCGCGCAGCAATCCGCAGGCAGAACTGATTAAAGATGTTTACGGCATTGATGACGCACTGCGCGCGATTGCCGGTGACAGCGTTTCAGGCCTCGGAACTGGCGGCATGAGTACCAAATTGCAGGCCGCTGACGTGGCTTGCCGTGCGGGTATCGACACCATTATTGCCGCGGGCAGCACGCCGGGCGTTagcgttgag < 1:569574/237‑9 (MQ=255) gACCGATCAAAAAGGTTTGTATACCGCTGACCCGCGCAGCAATCCGCAGGCAGAACTGATTAAAGATGTTTACGGCATTGATGACGCACTGCGCGCGATTGCCGGTGACAGCGTTTCAGGCCTCGGAACTGGCGGCATGAGTACCAAATTGCAGGCCGCTGACGTGGCTTGCCGTGCgg > 1:223715/1‑179 (MQ=255) gATCAAAAAGGTTTGTATACCGCTGACCCGCGCAGCAATCCGCAGGCAGAACTGATTAAAGATGTTTACGGCATTGATGACGCACTGCGCGCGATTGCCGGTGACAGCGTTTCAGGCCTCGGAACTGGCGGCATGAGTACCAAATTGCAGGCCGCTGACGTGGCTTGCCGTGCGGGTAt < 2:223710/179‑1 (MQ=255) acacgtttctttgccaccgcgcaggatgaccgcattaccggttttcaggcacagcgaagcgacatcaaccgtcacgttcgggcgcgcttcataaatcacgccaataacccccagcggtacgcgacgacgctcaagacGAAGGCCGCTGACGTAGCTTGCCGTGCGGGTATCGACaccattattccc < 1:426231‑M1/49‑4 (MQ=255) acacgtttctttgccaccgcgcaggatcaccgcattaccggttttcaggcacagcgaagcgacatcaaccgtcacgttcgggcgcgcttcataaatcacgccaataacccccagcggtacgcgacgacgctcaagacGCAGGCCGCTGACGTGGCTTGCCGTGCGGGTATCGACACCATTATTGcc < 2:648615‑M1/49‑1 (MQ=255) gtttctttgccaccgcgcaggatcaccgcattaccggttttcaggcacagcgaagcgacatcaaccgtcacgttcgggcgcgcttcataaatcacgccaataacccccagcggtacgcgacgacgctcaagacGCAGGCCGCTGACGTGGCTTGCCGTGCGGGTATCGACACCATTATTGCCGCgg > 1:648624‑M1/134‑186 (MQ=255) aCCCGCGCAGCAATCCGCAGGCAGAACTGATTAAAGATGTTTACGGCATTGATGACGCACTGCGCGCGATTGCCGGTGACAGCGTTTCAGGCCTCGGAACTGGCGGCATGAGTACCAAATTGCAGGCCGCTGACGTGGCTTGCCGTGCGGGTATCGACACCATTATTGCCGCGGGCAGCAAGCCGGGCGTTATTGGTGATGTGATGGAAGGCCTTTCCGTCGGTACGCTGTTCCATGCCCAGGCGACTCCGCTTGAAAACCGGAAACGCTGGAtt > 1:42638/1‑275 (MQ=255) cgcAGCAATCCGCAGGCAGAACTGATTAAAGATGTTTACGGCATTGATGACGCACTGCGCGCGATTGCCGGTGACAGCGTTTCAGGCCTCGGAACTGGCGGCATGAGTACCAAATTGCAGGCCGCTGACGTGGCTTGCCGTGCGGGTATCGACACCATTATTGCCGCGGGCAGCAAGCCgg > 1:222411/1‑181 (MQ=255) cgcAGCAATCCGCAGGCAGAACTGATTAAAGATGTTTACGGCATTGATGACGCACTGCGCGCGATTGCCGGTGACAGCGTTTCAGGCCTCGGAACTGGCGGCATGAGTACCAAATTGCAGGCCGCTGACGTGGCTTGCCGTGCGGGTATCGACACCATTATTGCCGCGGGCAGCAAGCCGGGCGTTATTGGTGAGGTGATGGAAGGCATTTCCGTCGGTa > 2:297475/1‑220 (MQ=255) gcaATCCGCAGGCAGAACTGATTAAAGATGTTTACGGCATTGATGACGCACTGCGCGCGATTGCCGGTGACAGCGTTTCAGGCCTCGGAACTGGCGGCATGAGTACCAAATTGCAGGCCGCTGACGTGGCTTGCCGTGCGGGTATCGACACCATTATTGCCGCGGGCAGCAAGCCGGGCGt < 2:222406/181‑1 (MQ=255) gcaATCCGCAGGCAGAACTGATTAAAGATGTTTACGGCATTGATGACGCACTGCGCGCGATTGCCGGTGACAGCGTTTCAGGCCTCGGAACTGGCGGCATGAGTACCAAATTGCAGGCCGCTGACGTGGCTTGCCGTGCGGGTATCGACACCATTATTGCCGCGGGCAGCAAGCCGGGCGTTATTGGTGATGTGATGGAAGGCATTTCCGTCGGTACGCt < 1:297481/220‑1 (MQ=255) agAACTGATTAAAGATGTTTACGGCATTGATGACGCACTGCGCGCGATTGCCGGTGACAGCGTTTCAGGCCTCGGAACTGGCGGCATGAGTACCAAATTGCAGGCCGCTGACGTGGCTTGCCGTGCGGGTATCGACACCATTATTGCCGCGGGCAGCAAGCCGGGCGTTATTGGTGATGTGATGGAAGGc > 2:624638/1‑190 (MQ=255) cTGATTAAAGATGTTTACGGCATTGATGACGCACTGCGCGCGATTGCCGGTGACAGCGTTTCAGGCCTCGGAACTGGCGGCATGAGTACCAAATTGCAGGCCGCTGACGTGGCTTGCCGTGCGGGTATCGACACCATTATTGCCGCGGGCAGCAAGCCGGGCGTTATTGGTGATGTGATGGAAGGCAttt < 1:624647/190‑1 (MQ=255) ttAAAGATGTTTACGGCATTGATGACGCCCTGCGCGCGATTGCCGGTGCCAGCGTTTCAGGCCTCGGAACTGGCGGCATGAGTACCAATTTGCAGGCCGCTGACGTGGCTTGCCGTGCGGGTATCGACACCATTATTg > 1:179893/1‑138 (MQ=255) cttagtcgTTTGCGGAATGTATGACGCATTCTGGGCGGTGGCCGGGGACTGCGTGTTCGGCTTCGGAACTGGGTGCATGAGGATCAAATTTCAGTCCGCTGACGTGGCGTGCCGTGCGGGTAACGACACCATTAGTGCCGCGGGCAGCAAGCCGGGCGTTATTGGTGTTGTGATGGAAGGCATTTCCGTCGGTACGCTGTTCCATGCCCAGGCGACTCCGCTTGAAAACCGTAAACGCTGGATTTTCGGTGCGCTGCCGGCGGGTGAAATCACg < 2:98072/267‑1 (MQ=255) cagcgaagcgacatcaaccgtcacgttcgggcgcgcttcataaatcacgccaataacccccagcggtacgcgacgacgctcaagacGc < 2:495212‑M1/2‑1 (MQ=255) gTTTACGGCATTGATGACGCACTGCGCGCGATTGCCGGTGACAGCGTTTCAGGCCTCGGAACTGGCGGCATGAGTACCAAATTGCa < 1:582269/86‑1 (MQ=255) gaagcgacatcaaccgtcacgttcgggcgcgcttcataaatcacgccaataaccccccgtggtccgcgacgacgctcaagacGCAGGc > 1:495219‑M1/83‑88 (MQ=255) catcaaccgtcacgttcgggcgcgcttcataaatcacgccaataacccccagcggtacgcgacgacgctcaagacGCAg < 2:292824‑M1/4‑1 (MQ=255) aaccgtcacgttcgggcgcgcttcataaatcacgccaataacccccagcggtacgcgacgacgctcaagacGCAGGCCg > 1:292830‑M1/72‑79 (MQ=255) cgtcacgttcgggcgcgcttcataaatcacgccaataacccccagcggtacgcgacgacgctcaagacGCAGGCCGCTGACGTGGCTTGCCGTGCGGGTATCGACACCATTATTGcc < 2:630202‑M1/49‑1 (MQ=255) cgtcacgttcgggcgcgcttcataaatcacgccaataacccccagcggtacgcgacgacgctcaagacGCAGGCCGCTGACGTGGCTTGCCGTGCGGGTATCGACACCATTATTGcc < 2:452325‑M1/49‑1 (MQ=255) gCACTGCGCGCGATTGCCGGTGACAGCGTTTCAGGCCTCGGAACTGGCGGCATGAGTACCAAATTGCAGGCCGCTGACGTGGCTTGCCGTGCGGGTAt > 2:147/1‑98 (MQ=255) acgttcgggcgcgcttcataaatcacgccaataacccccagcggtacgcgacgacgctcaagacGCAGGCCGCTGACGTGGCTTGCCGTGCGGGTATCGACACCATTATTGCCGCgg > 1:630211‑M1/65‑117 (MQ=255) acgttcgggcgcgcttcataaatcacgccaataacccccagcggtacgcgacgacgctcaagacGCAGGCCGCTGACGTGGCTTGCCGTGCGGGTATCGACACCATTATTGCCGCgg > 1:452332‑M1/65‑117 (MQ=255) tGCGCGCGATTGCCGGTGACAGCGTTTCAGGCCTCGGAACTGGCGGCATGAGTACCAAATTGCAGGCCGCTGACGTGGCTTGCCGTGCGGGTATCGac < 1:147/98‑1 (MQ=255) gcgcgcGATTGTCGTTGACAGCGCTTCAGGCCTCGGAACTGGCGGCTTGACTACCAAATTGCAGCCCTCGGACGTGGCTGGCCGTGCGGGTATCCGCACCATTATTGCCGCGGGCAGCAAGCCGGGCGTTATTGGTCATGTGATGCAAGGCATATCCGTCGGTACGCTGTTCCATGCCCAGGCGACTCCGCTTGAAAACAGTAAAAGCGGGATTTTCGGTGCGCCGCCGGCGGCGGAAATCACGGTAGGGGAAGTGGCaccacaaggcatgt > 2:27056/1‑259 (MQ=255) gcgcgcGATTGCCGGTGACAGCGTTTCAGGCCTCGGAACTGGCGGCATGAGTACCAAATTGCAGGCCGCTGACGTGGCTTGCCGTGCGGGTATCGACACCATTATTGCCGCGGGCAGCAAGCCGGGCGTTATTGGTGATGTGATGGAAGGCATTTCCGTCGGTACGCTGTTCCATGCCCAGGCGACTCCGCTTGAAAACCGTAAACGCTGGATTTTCGGTGCGCCGCCGGCGGGTGaa > 1:589269/1‑238 (MQ=255) gcgcgcGATTGCCGGTGACAGCGTTTCAGGCCTCGGAACTGGCGGCATGAGTACCAAATTGCAGGCCGCTGACGTGGCTTGCCGTGCGGGTATCGACACCATTATTGCCGCGGGCAGCAAGCCCGGCGCTCTTGGTGATGTGATGGAAGGCATTTCCGTCGGTACGCTGTTCCATGCCCAGGCGACTCCGCTTGAAAACCGTAACCGCTCGCTTTTAGGTTCGCCGCAGGCGGGGGAGATCACGGTAGCTGAAGGGGCATCTgccggccgtttgg > 2:21249/1‑266 (MQ=255) gcgcgcGATTGCCGGTGACAGCGTTTCAGGCCTCGGAACTGGCGGCATGAGTACCAAATTGCAGGCCGCTGACGTGGCTTGCCGTGCGGGTATCGACACAATTATTGCCGCGGGCAGCAAGc > 1:346106/1‑122 (MQ=255) gcgcgcttcataaatcacgccaataacccccagcggtacgcgacgacgctcaagacGCAGGCCGCTGACGTGGCTTGCCGTGCGGGTATCGACACCATTATTGCCGCGGGCAGCAAGCCGGGCGTTATTGGTGATGTGATGGAAGGCATTTCAGTCGGTACGCTGTTCCATGCCCAGGCGACTCCGCTTGAAAACTGTAAACGCTGGATTTTCGGTGCGCCGCCGGCGGGTGAAATCACGGTAGATGAAGGGGCAAATGCCGCCATTCTGGAAcg < 1:674945‑M1/219‑1 (MQ=255) gcgATTGCCGGTGACAGCGTTTCAGGCCTCGGAACTGGCGGCATGAGTACCAAATTGCAGGCCGCTGACGTGGCTTGCCGTGCGGGTATCGACACCATTATTGCCGCGGGCAGCAAGCCggg < 2:346100/122‑1 (MQ=255) ccGGTGACAGCGTTTCAGGCCTCGGAACTGGCGGCATGAGTACCAAATTGCAGGCCGCTGACGTGGCTTGCCGTGCGGGTATCGACACCATTATTGCCGCGGGCAGCAAGCCGGGCGTTATTGGTGATGTGATGGAAGGCATTTCCGTCGGt > 1:6508/1‑152 (MQ=255) tGACAGCGTTTCAGGCCTCGGAACTGGCGGCATGAGTACCAAATTGCAGGCCGCTGACGTGGCTTGCCGTGCGGGTATCGACACCATTATTGCCGCGGGCAGCAAGCCGGGCGTTATTGGTGATGTGATGGAAGGCATTTCCGTCGGTACGc < 2:6508/152‑1 (MQ=255) ggACAGCGTTTCAGGCCTCGGAACTGGCGGCCTGAGTACCAAATTGCAGGCCGCTGACGTGGCTTGCCGTGCGGGTAGCGACACCATTATTGCCGCGGGCAGCAAGCCGGGCGTTATTGGTGATGTGATGGAAGGCATTTTCGTCGGTACGCTGTTCCATGCCCAGGCGACTCCGCTTGAAAACCGTAAACGCTGGATTTTCGGTGCGCCGCCGGCGGGTGAAATCa < 1:701678/226‑1 (MQ=255) gccaataacccccagcggtacgcgacgacgctcaagacGCAg < 2:103413‑M1/4‑1 (MQ=255) ataacccccagcggtacgcgacgacgctcaagacGCAGGCCg > 1:103414‑M1/35‑42 (MQ=255) cTCGGAACTGGCGGCATGAGTACCAAATTGCAGGCCGCTGACGTGGCTTGCCGTGCGGGTATCGACACCATTATTGCCGCGGGCAGCAAGCCGGGCGTTATTGGTGATGGGATGGAAGGCATTTCCGTCGGTACGTTGTTCCATGCGCAGGCGACTCCNCTTGAAAACCGTAAACGCTGGATTTTCGGTGCGCCGCCGGCGGGCGAAATCACGGTAGATGAAGGGGCAACTGCCGCCATCTTGGAACGCGGCAGCTACCTGTGCCCGAACGGCAt > 1:659166/1‑275 (MQ=255) tACCAAATTGCAGGCCGCTGACGTGGCTTGCCGTGCGGGTATCGACACCATTATTGCCGCGGGCAGCAAGCCGGGCGTTATTGGTGATGTGATGGAAGGCATTTcc > 1:596515/1‑106 (MQ=255) aaaTTGCAGGCCGCTGACGTGGCTTGCCGTGCGGGTATCGACACCATTATTGCCGCGGGCAGCAAGCCGGGCGTTATTGGTGATGTGATGGAAGGCATTTCCGTCg < 2:596506/106‑1 (MQ=255) | CGTTCCGGTAATCAATGAGAACGATGCTGTCGCTACGGCAGAGATTAAGGTCGGCGATAACGATAACCTTTCTGCGCTGGCGGCGATTCTTGCGGGTGCCGATAAACTGTTGCTGCTGACCGATCAAAAAGGTTTGTATACCGCTGACCCGCGCAGCAATCCGCAGGCAGAACTGATTAAAGATGTTTACGGCATTGATGACGCACTGCGCGCGATTGCCGGTGACAGCGTTTCAGGCCTCGGAACTGGCGGCATGAGTACCAAATTGCAGGCCGCTGACGTGGCTTGCCGTGCGGGTATCGACACCATTATTGCCGCGGGCAGCAAGCCGGGCGTTATTGGTGATGTGATGGAAGGCATTTCCGTCGGTACGCTGTTCCATGCCCAGGCGACTCCGCTTGAAAACCGTAAACGCTGGATTTTCGGTGCGCCGCCGGCGGGTGAAATCACGGTAGATGAAGGGGCAACTGCCGCCATTCTGGAACGCGGCAGCTCCCTGTTGCCGAAAGGCAT > CP009273/256485‑256997 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |