New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP009273	= 472791	39 (1.010)	5 (0.140)	5/300	NT	12.9%	coding (1283/1551 nt)	ylaB	putative membrane‑anchored cyclic‑di‑GMP phosphodiesterase
	?	CP009273	= 472983	30 (0.820)					coding (1091/1551 nt)	ylaB	putative membrane‑anchored cyclic‑di‑GMP phosphodiesterase

TCTTCTTTCGGTAATGCCTTGCTGTAGAGCCAGCCCTGACCGTAGTGCACGCCATGCTGGCGTAACCACTCTTCTTGTTTACTGGTTTCGATTCCCTCCGCTACCATTTTCAGTTTCAGTGTTTTTGCCATTTCGATGATATGCGGCGTGACATTTTTATATTCCAGCGCATCAACGAAAGATTTATCGATCTTCAGAATGTCGACATCCAGATCCTGTAAATAACTTAAACTTGAATACCCCGTACCAAAATCATCAAGATAAATTTCATGGCCCGCCTCCCGGTAGCGAGAAATTATCGGGGCGCTGGTTTTCGGATCGGCAAACTCGCGTTCAGTGAGTTCAAGCGCGATCTGTCTGGGATTAACCTGATAGTGATTGATCATGTCACGCAGCAATTGCGGGATTTTTTCCGAGGTGAGCACGGGGGATTCAAGATTGATCGAAATATGCTGCTGTGGATGCTGACGCAGCCAGTCGCCCATATCTTCAAAGACGCTTCT  >  CP009273/472554‑473056                                                                                                                                                                                                                                              |                                                                                                                                                                                                                                                                          tcttctTTCGGTAATGCCTTGCTGTAGAGCCAGCCCTGACCGTAGTGCACGCCATGCTGGCGTAACCACTCTTCTTGTTTACTGGTTTCGATTCCCTCCGCTACCATTTTCAGTTTCAGTGTTTTTGCCATTTCGATGATATGCGGCGTGACATTTTTATATTCCAGCGCATCAACGAAAGATTTATCGATCTTCAGAATGTCGACATCCAGATCCTGTAAATAACTTAAACTTGAAT                                                                                                                                                                                                                                                                           <  1:430204‑M1/238‑1 (MQ=255)                                 gccCTGACCGTAGTGCACGCCATGCTGGCGTAACCACTCTTCTTGTTTACTGGTTTCGATTCCCTCCGCTACCATTTTCAGTTTCAGTGTTTTTGCCATTTCGATGATATGCGGCGTGACATTTTTATATTCCAGCCCATCAACGCACGATTTTTCTATCTTCAGAATATCGACATCCAGATCCCGTAAATAACTTACACTTGATTACCCCGTACCAAAATAATCAAGATAAATCACAAGGCCCACCTCCCGTTACCAAGACATTAtagttgccc                                                                                                                                                                                                      >  2:682311/1‑267 (MQ=255)                                            aGTGCACGCCATGCTGGCGTAACCACTCTTCTTGTTTACTGGTTTCGATTCCCTCCGCTACCATTTTCAGTTTCAGTGTTTTTGCCATTTCGATGATATGCGGCGTGACATTTTTATATTCCAGCGCATCAACGAAAGATTTATCGATCTTCAGAATGTCGACATCCAGATCCTGTAAATAACTTAAACTTGAATACCCCGTACCAAAATAATCAAAATAAATTTAATGGCAAGCACCCCGGTAGCGAGAAATCATCGGGGCGCTGGTTTTGGGa                                                                                                                                                                                           >  2:655142/1‑275 (MQ=255)                                                     cATGCTGGCGTAACCACTCTTCTTGTTTACTGGTTTCGATTCCCTCCGCTACCATTTTCAGTTTCAGTGTTTTTGCCATTTCGATGATATGCGGCGTGACATTTTTATATTCCAGCGCATCAACGAAAGATTTATCGATCTTCAGAATGTCGACATCCAGATCCTGTAAATAAATTAAACTTGAATACCACGTACCAAAATCAATAAGATAAATTCAATGACCCGCACACCGGTAGCGAGAAATGATAGGGGAGCGGGTTTTCGGATgggacaaa                                                                                                                                                                                  >  2:674965/1‑270 (MQ=255)                                                        gCTGGCGTAACCACTCTTCTTGTTTACTGGTTTCGATTCCCTCCGCTACCATTTTCAGTTTCAGTGTTTTTGCCATTTCGATGATATGCGGCGTGACATTTTTATATTCCAGCTCCTCAACGAAAGATTTATCGATGTTCAGAATGTCGACATCCAGATCCTGTAAATAACTTAAACTTGAATACCCCGTACCAAAATCATCAAGATAAATTTCATGGCACGCCTCCCGGTAGCGAGAAATTATCGGGGCGCTGGTTGTAGGATCGGCAAATTcg                                                                                                                                                                               >  1:180240/1‑275 (MQ=255)                                                        gCTGGCGTAACCACTCTTCTTGTTTACTGGTTTCGATTCCCTCCGCTACCATTTTCAGTTTCAGTGTTTTTGCCATTTCGATGATATGCGGCGTGACATTTTTATATTCCAGCGCATCAACGAAAGATTTATCGATCTTCAGAATGTCGACATCCAGATCCTGTAAATAACTTAAACATTAATACCCCGTACCAAAATCATCAAGATAAATTTCATGGCTCGCCTCCCGCTAGCGAGAAATTATAGAGACGCTGGCTTTCGAATCGGCAAACTcg                                                                                                                                                                               >  1:387076/1‑275 (MQ=255)                                                             cGTAACCACTCTTCTTGTTTACTGGTTTCGATTCCCTCCGCTACCATTTTCAGTTTCAGTGTTTTTGCCATTTCGATGATATGCGGCGTGACATTTTTATATTCCAGCGCATCAACGAAAGATTTATCGATCTTCAGAATGTCGACATCCAGATCCTGTAAATAACTTAAACTTGAATACCCCGTACCAAAATCATCAAGATAAATTTCATGGCCCGCCTCCCGGTAGCGAGAAATTATCGGGGCGCTGGTTTTCGGATCGGCAAACTCGCGtt                                                                                                                                                                           >  1:191326/1‑274 (MQ=255)                                                               tAACCACTCTTCTTGTTTACTGGTTTCGATTCCCTCCGCTACCATTTTCAGTTTCAGTGTTTTTGCCATTTCGATGATATGCGGCGTGACATTTTTATATTCCAGCGCATCAACGAAAGATTTATCGATCTTCAGAATGTCGACATCCAGATCCTGTAAATAACTTAAACTTGAATACCCCGTACCAAAATCATCAAGATAAATTTCATGGCCCGCCTCCCGGTAGCGAGAAATTATCGGGGCGCTGGTTTTCGGATCGGCAAACTCGCGTTCAg                                                                                                                                                                        >  1:55970/1‑275 (MQ=255)                                                                 aCCACTCTTCTTGTTTACTGGTTTCGATTCCCTCCGCTACCATTTTCAGTTTCAGTGTTTTTGCCATTTCGATGATATGCGGCGTGACATTTTTATATTCCAGCGCATCAACGAAAGATTTCTCGATCTTCAGAAGGTCGACATCCAGATCCGGTAAATAACTTAAACTAGAATACCCCTTACCAAACTCATAAAAATAAATTTAATGGCCCACCTCCCGGTAGCGAGAAACTATCGGGGCGCCGGTTTTCGGGCCGGCAACCTctagactcgg                                                                                                                                                                       >  2:621651/1‑265 (MQ=255)                                                                     ctctTCTTGTTTACTGGTTTCGTTTCCCTCCGCTACCATTTTCAGTTTCAGTGTTTTTGCCATTTCGATGATATGCGGCGTGACATTTTTATATTCCAGCGCATCAACGAAAGATTNATCGATCTTCACAATGTCGACATCCAGATCCTGTAAATAACTTAAACTTGAATACCCCGTACCAAAATCATCAAGATAAATTTCATGGCCCGCCTCCCGGTAGCGAGAAATTATCGGGGCGCTGGTTTTCGGATCGGCAAACTCGCGTTCAGTGAGtt                                                                                                                                                                  <  1:655151/275‑1 (MQ=255)                                                                               ttACTGGTTTCGATTCCCTCCGCTACCATTTTCAGTTTCAGTGTTTTTGCCATTTCGATGATATGCGGCGTGACATTTTTATATTCCAGCGCATCAACGAAAGATTTATCGATCTTCAGAATGTCGACATCCAGATCCTGTAAATAACTTAAACTTGAATACCCCGTACCAAAATCATCAAGATAAATTTCATGGCCCGCCTCCCGGTAGCGAGAAATTATCGGGGCGCTGGTTTTCGGATCGGCAAACTCGCGTTCAGTGAGTTCAAGCGCGAt                                                                                                                                                        <  2:191323/275‑1 (MQ=255)                                                                                        tCGATTCCCTCCGCTACCATTTTCAGTTTCAGTGTTTTTGCCATTTCGATGATATGCGGCGTGACATTTTTATATTCCAGCGCATCAACGAAAGATTTATCGATCTTCAGAATGTCGACATCCAGATCCTGTAAATAACTTAAACTTGAATACCCCGTACCAAAATCATCAAGATAAATTTCATGGCACGCCTCCCGGTAGCGAGAAATTATCGGGGCACTGGTTTTCGGAACGGCAAACTCGCGGTCAGTGAGGTAAAGCGCGagcgtttcgag                                                                                                                                               >  2:91861/1‑265 (MQ=255)                                                                                        tCGATTCCCTCCGCTACCATTTTAAGTGTCAGTGTTTTTGCCATTTCGATGATATGCGGCGTCACATTTTTATATTCCAGCGCATCAACGAAAGATTTATCGATCTTCAGAATGTCGACATCCAGATCCTGTAAATAACTTAAACTTGAAT                                                                                                                                                                                                                                                                           >  1:410244‑M1/1‑151 (MQ=255)                                                                                            ttCCCTCCGCTACCATTTTAAGTTTCAGTGTTTTTGCCATTTCGATGATATGCGGCGTGACATTTTTATATTCCAGCGCATCAACGAAAGATTTATCGATCTTCAGAATGTCGACATCCAGATCCTGTAAATAACTTAAACTTGAATAcca                                                                                                                                                                                                                                                                       <  2:410237/151‑2 (MQ=255)                                                                                              nccTNCCCTACCATTTTCAGTTTCATTGTTTTTGCCATTTAGATGGTATGCGGCGTGACATTTTTATATTCCAGCGAATCAACGAAAGATTTATCGATCTTCAGAATGTCGACATCCAGATCCTGTAAATAACTGAAACTTGAATACCCCGTACCAAAATCATCAAGATAAATTTCATGGCCCGCCTCCCGGTAGCGAGAAATTATCGGGGCGCTGGTTTTCGGATCGGCAAACTCGCGTTCAGTGAGTTCAAGCGCGATCTGTCTGGGATTAAc                                                                                                                                         <  2:102/274‑1 (MQ=255)                                                                                                 tCCGCTACCATTTTCAGTTTCAGTGTTTTTGCCATTTCGATGATATGCGGCGTGACATTTTTATATTCCAGCGCATCAACGAAAGATTTATCGATCTTCAGAATGTCGACATCCAGATCCTGTAAATAACTTAAACTTGAATACCCCGTACCAAAATCATCAAGATAAATTTCATGGCCCGCCTCCCGGTAGCGAGAAATTATCGGGGCGCTGGTTTTCGGATCGGCAAACTCGCGTTCAGTGAGTTCAAGCGCGATCGGTCTGGGAt                                                                                                                                             >  1:102/1‑268 (MQ=255)                                                                                                 tCCGCTACCATTTTCAGTTACAGTGTTTTTGCCATTTCGATGATATGCGGCGTGACATTTTTATATTCCAGCGCATCAACGAAAGATTTATCGATCTTCAGAATGTCGACATCCAGATCCTGTAAATAACTTAAACTTGAATACCCCGTACCAAAATCATCAAGATAAATTTCATGGCCCGCCTCCCGGTAGCGAGAAATTATCGGGGCGCTGGTTTTCGGATCTGCAAACTCGCGTTCAGTGAGTTCAAGCGCGATCTGTCTGGGATTAACCTg                                                                                                                                      >  1:570459/1‑275 (MQ=255)                                                                                                                                ccATTTCGATGATATGCGGCGTGATATTTTTATATTCCAGCGCATCAACGAAAGATTTATCGATCTTCAGAATGTCGACATCCAGATCCTGTAAATAACTTAAACTTGAATACCCCGTACCAAAATCATCAAGATAAATTTCATGGCCCGCCTCCCGGTAGCGAGAAATTATCGGGGCGCTGGTTTTCGGATCGGCAAACTCGCGTTCAGTGAGTTCAAGCGCGATCTGTCTGGGATTAACCTGATAGTGATTGATCATGTCACGCAGCAATTGc                                                                                                       <  1:91862/275‑1 (MQ=255)                                                                                                                                  aTTTCGATGATATGCGGCGTGACATTTTTATATTCCAGCGCATCAACGAAAGATTTATCGATCTTCAGAATGTCGACATCCAGATCCTGTAAATAACTTAAACTTGAATACCCCGTACCAAAATCATCAAGATAAATTTCATGGCCCGCCTCCCGGTAGCGAGAAATTATCGGGGCGCTGGTTTTCGGATCGGCAAACTCGCGTTCAGTGAGTTCAAGCGCGATCTGTCTGGGATTAACCTGATAGTGATTGATCATGTCACGCAGCAAtttgtg                                                                                                     >  2:77919/1‑271 (MQ=255)                                                                                                                                            tatGCGGCGTGACATTTTTATATTCCAGCGCATCAACGAAAGATTTATCGATCTTCAGAATGTCGACATCCAGATCCTGTAAATAACTTAANCTTGAATACCCCGTACCAAAATCATCAAGATAAATTTCATGGCCCGCCTCCCGGTAGCGAGAAATTATCGGGGCGCTGGTTTTCGGATCGGCAAACTCGCGTTCAGTGAGTTCAAGCGCGATCTGTCTGGGATTAACCTGATAGTGATTGATCATGTCACGCAGCAATTGCGGGATTTTTTcc                                                                                           <  1:507152/275‑1 (MQ=255)                                                                                                                                                cggcgTGACATTTTTATATTCCAGCGCATCAACGAAAGATTTATCGATCTTCAGAATGTCGACATCCAGATCCTGAAAATAACTTAAACTTGAATACCCCGTACCAAAATCATCAAGATAAATTTCATGGCCCGCCTCCCGGTAGCGAGAAATTATCGGGGCGCTGGTTTTCGGATCAGCAAACTCGCGTTCAGTGAGTTCAAGCGCGATCTGTCTGGGATTAACCTGATAGTGATTGATCATGTCACGCAGCAATTGCGGGATTTTTTCCGAgg                                                                                       >  1:360034/1‑275 (MQ=255)                                                                                                                                                     tGACTTTGTTANATTCCAGCGCATCAACGAAAGAATTATCGATCGTCAGAATGTCGACATACAGAACCTGTAAATAACTTACACTTGAATACCCCGTACCAAAATCAGCAAGTTATATTGCATGGCCCGCCTCCCGGTAGCGAGAAATTATCGGGGCGCTGGTTTTCGGATCGGCAAACTCGCGTTCAGTAAGTTCAAGCGCGATCTGTCTGGGATTAACCTGATAGTGATTGATCATGTCACGCAGCAATTGCGGGATTTTTTCCGAGGTGAGc                                                                                  <  2:55970/275‑1 (MQ=255)                                                                                                                                                     tGACATTTTTATATTCCAGCGCATCAACGAAAGATTTATCGATCTTCAGAATGTCGACATCCAGATCCTGTAAATAACTTAAACTTGAATcccccgtgctcacctcggaaaaaatcccgcaattgctgcgtgacatgatcaatcactatcaggttaatcccagacagatcgcgcttgtacccactgaacgcgagttt                                                                                                                                                                >  1:392467‑M1/1‑90 (MQ=255)                                                                                                                                                     tGACATTTTTATATTCCAGCGCATCAACGAAAGATTTATCGATCTTCAGAATGTCGACATCCAGATCCTGTAAATAACTTAAACTTGAATACCCCGTACCAAAATCATCAAGATAAATTTCATGGCCCGCCTCCCGGTAGCGAGAAATTATCGGGGCGCTGGTTTTCGGATCGGCAAACTCGCGTTCAGTGAGTTCAAgcg                                                                                                                                                            >  1:54053/1‑201 (MQ=255)                                                                                                                                                         aTTTTTATATTCCAGCGCATCAACGAAAGATTTATCGATCTTCAGAATGTCGACATCCAGATCCTGTAAATAACTTAAACTTGAATACCCCGTACCAAAATCATCAAGATAAATTTCATGGCCCGCCTCCCGGTAGCGAGAAATTATCGGGGCGCTGGTTTTCGGATCGGCAAACTCGCGTTCAGTGAGTTCAAGCGCGAt                                                                                                                                                        <  2:54053/201‑1 (MQ=255)                                                                                                                                                         aTTTTTATAGTCCAGCGCATCAACAAAAGATTTATCGATCTTCAGACAGTCGACATCCAGATGCTGTAAATAACTTAAACTTGAATcccccgtgctcaccgcggaaacaatcccgcaattgctgcgtgacatgagaaatcactatcaggttaatcccagacagatcgcgcttgaactcactgagagcgagtttgccg                                                                                                                                                            <  2:392461‑M1/197‑112 (MQ=255)                                                                                                                                                                   tCCAGCGCATCAACGAAAGATTTATCGATCTTCAGAATGTCGACATCCAGATCCTGTAAATAACTTAAACTTGAATACCCCGTACCAAAATCATCAAGATAAATTTCATGGCCCGCCTCCCGGTAGCGAGAAATTATCGGGGCGCTGGTTTTCGGATCGGCAAACTCGCGTTCAGTGAGTTCAAGCGCGAtc                                                                                                                                                       >  2:425030/1‑192 (MQ=255)                                                                                                                                                                       gcgcATCAACGAAAGATTTATCGATCTTCAGAATGTCGACATCCAGATCCTGTAAATAACTTAAACTTGAATACCCCGTACCAAAATCATCAAGATAAATTTCATGGCCCGCCTCCCGGTAGCGAGAAATTATCGGGGCGCTGGTTTTCGGATCGGCAAACTCGCGTTCAGTGAGTTCAAGCGCGAtctgtc                                                                                                                                                   <  1:425037/192‑1 (MQ=255)                                                                                                                                                                        cgcATCAACTAAAGATTTATCTATCTTCAGAATGTCGACATCCAGATCCTGTAAATAACTTAAACTTGAATACCCCGTACCAAAATCATCAAGATAAATTTCATGGCCCGCCTCCCGGTAGCGAGAAATTATCGGGGCGCTGGTTTTCGGATCGGCAAACTCGCGTTCAGTGAGTTCAAGCGCGATCTGTCTGGGATTAACCTGATAGTGATTGATCATGTCACGCATCAATTGCGGGATTTTTTCCGAGGTGAGCACGGGGGATTCAAGATTGa                                                               <  1:172756/275‑1 (MQ=255)                                                                                                                                                                        cgcATCAACGAAAGATTTATCGATCTTCAGAATGTCGACATCCAGATCCTGTAAATAACTTAAACTTGAATACCCCGTACCAAAATCATCAAGATAAATTTCATGGCCCGCCTCCCGGTAGCGAGAAATTATCGGGGCGCTGGTTTTCGGATCGGCAAACTCGCGTTCAGTGAGTTCAAGCGCGAtctgtctg                                                                                                                                                 >  2:241327/1‑193 (MQ=255)                                                                                                                                                                            tCAACGAAAGATTTATCGATCTTCAGAATGTCGACATCCAGATCCTGTAAATAACTTAAACTTGAATACCCCGTACCAAAATCATCAAGATAAATTTCATGGCCCGCCTCCCGGTAGCGAGAAATTATCGGGGCGCTGGTTTTCGGATCGGCAAACTCGCGTTCAGTGAGTTCAAGCGCGATCTGTCTGGGAt                                                                                                                                             <  1:241332/193‑1 (MQ=255)                                                                                                                                                                                               tCTTCAGAATGTCGACATCCAGATCCTGTAAATAACTTAAACTTGAATaccgcgtgctcacctcggaaaaaatcccgcaattgctgcgtgacatgatcaatcactatcaggttaatcccagacagatcgagcttgaactcactgaacgcgagtttgccgatccgaaaaccagcgccccgataatttctcgctaccgggaggcgggccatgacaattaact                                                                                               >  1:71497‑M1/1‑48 (MQ=255)                                                                                                                                                                                               tCTTCAGAATGTCGACATCCAGATCCTGTAAATAACTTAAACTTGAATACCCCGTACCAAAATCATCAAGATAAATTTCATGGCCCGCCTCCCGGTAGCGAGAAATTATCGGGGCGCTGGTTTTCGTATCGGCAAACTCGCGTTCAGTGAGTTCAAGCGCGATCTGTCTGCGATTAACCTGATAGTGATTGATCATGTCACGCAGCAATTGCGGGATTTTTTCCGAGGTGCGCACGGGGGATTCAAGATAGATAGAAAAATGCAGATGTGGATGc                                        >  1:448668/1‑275 (MQ=255)                                                                                                                                                                                                cTTCAGAATGTCGACATCCAGATCCTGTAAATAACTTAAACTTGAATACCCCGTACCAAAATCATCAAGATAAATTTCATGGCCCGCCTCCCgg                                                                                                                                                                                                                            >  1:273682/1‑94 (MQ=255)                                                                                                                                                                                                    aGAATGTCGACATCCAGATCCTGTAAATAACTTAAACTTGAATACCCCGTACCAAAATCATCAAGATAAATTTCATGGCCCGCCTCCCGGTAGc                                                                                                                                                                                                                        <  2:273677/94‑1 (MQ=255)                                                                                                                                                                                                        tGTCGACATCCAGATCCTGTAAATAACTTAAACTTGAATcccccgtgctcacctcggaaa                                                                                                                                                                                                                                                      >  2:683470‑M1/1‑39 (MQ=255)                                                                                                                                                                                                            gACATCCAGATCCTGTAAATAACTTAAACTTGAATcccccgtgctcacctcggaaaaaat                                                                                                                                                                                                                                                  <  1:683479‑M1/60‑26 (MQ=255)                                                                                                                                                                                                               aTCCAGATCCTGTAAATAACTTAAACTTGAATACCCCGTACCAAAATCATCAANATAAATTTCATGGCCCGCCTCCCGGTAGCGAGAAATTATCGGGGCGCTGGTTTTCGGATCGGCAAACTCGCGTTCAGTGAGTTCAAGCGCGATCTGTCTGGGATTAACCTGATAGTGATTGATCATGTCACGCAGCAATTGCGGGATTTTTTCCTAGGTGAGCACGGCGGATTCAAGATTGAt                                                              <  1:499705/237‑1 (MQ=255)                                                                                                                                                                                                                  cAGATCCTGTAAATAACTTAAACTTGAATACCCCGTACCAAAat                                                                                                                                                                                                                                                            >  1:66961/1‑44 (MQ=255)                                                                                                                                                                                                                     aTCCTTTAAATAATTTAAACTTTAATACCCCGTACCAAATTAAGCAAGATAAATTTCATGGCCCGCTTCCAGGTAGCGAGANATTATCGGNGCGCTGGTTTTCTGATCGGCAAACTCGCGTTCAGTGAGTTCAAGCGCGATCTGTCTGGGATTAACCTGATAGTGATTGATCATGTCACGCAGCAATTGCGGGATTTTTTCCGAGGTGAGCACGGGGGATTCAAGATTGATCGAAATATTCTGCTGTAGATGCTGACGCCGCCAGTCGCCCata                   <  1:484624/274‑1 (MQ=255)                                                                                                                                                                                                                      tCCTGTAAATAACTTAAACTTGAATACCCCGTACCAAAatcatc                                                                                                                                                                                                                                                        <  2:66960/44‑1 (MQ=255)                                                                                                                                                                                                                                  cTTAAACTTGAATACCCCGTACCAAAATCATCAAGATAAATTTCATGGCCCGCCTCCCGGTAGCGAGAAATTATCGGGGCGCTGGTCTTCGGATCGGCAAACTCGCGTTCAGTGAGTTCAAGCGCGATCTGTCTGGGATTAACCTGATAGTGATTGATCATGTCACGCAGCAATTGCGGGATTTTTTCCGAGGTGAGCACGGGGGATTCAAGATTGATCGAAATATGCTGCTGTGGATGCTGACGCAGCCAGTCGCCCATATCTTCAAAGACGct     >  1:588516/1‑275 (MQ=255)                                                                                                                                                                                                                                   ttAAACTTGAATACCCCGTACCAAAATCATCAAGATAAATTTCAt                                                                                                                                                                                                                                          >  1:31656/1‑45 (MQ=255)                                                                                                                                                                                                                                     aaaCTTGAATACCCCGTACCAAAATCATCAAGATAAAtt                                                                                                                                                                                                                                              >  2:247220/1‑39 (MQ=255)                                                                                                                                                                                                                                     aaaCTTGAATACCCCGTACCAAAATCATCAAGATAAATTTCATGGCCCGCCTCCCGGTAGCGAGAAATTATCGGGGCGCTGGTTTTCGGATCGGCAAACTCGCGTTCAGTGAGTTCAAGCGCGATCTGTCTGGGATTAACCTGATAGTGATTGATCATGTCACGCAGCAATTGCGGGATTTTTTCCGAGGTGAGCACGGGGGATTCAAGATTGATCGAAATATGCTGCTGTGGATGCTGACGCAGCCAGTCGCCCATATCTTCAAAGACGcttct  >  1:398539/1‑275 (MQ=255)                                                                                                                                                                                                                                       aCTTGAATACCCCGTACCAAAATCATCAAGATAAATTTCATGGcc                                                                                                                                                                                                                                      <  2:31656/45‑1 (MQ=255)                                                                                                                                                                                                                                         ttGAATACCCCGTACCAAAATCATCAAGATAAATTTCAt                                                                                                                                                                                                                                          <  1:247225/39‑1 (MQ=255)                                                                                                                                                                                                                                           gAATcccccgtgctcacctcggaaaaaatcccgcaattgctgcgtgaca                                                                                                                                                                                                                              <  2:53430‑M1/49‑46 (MQ=255)                                                                                                                                                                                                                                              |                                                                                                                                                                                                                                                                          TCTTCTTTCGGTAATGCCTTGCTGTAGAGCCAGCCCTGACCGTAGTGCACGCCATGCTGGCGTAACCACTCTTCTTGTTTACTGGTTTCGATTCCCTCCGCTACCATTTTCAGTTTCAGTGTTTTTGCCATTTCGATGATATGCGGCGTGACATTTTTATATTCCAGCGCATCAACGAAAGATTTATCGATCTTCAGAATGTCGACATCCAGATCCTGTAAATAACTTAAACTTGAATACCCCGTACCAAAATCATCAAGATAAATTTCATGGCCCGCCTCCCGGTAGCGAGAAATTATCGGGGCGCTGGTTTTCGGATCGGCAAACTCGCGTTCAGTGAGTTCAAGCGCGATCTGTCTGGGATTAACCTGATAGTGATTGATCATGTCACGCAGCAATTGCGGGATTTTTTCCGAGGTGAGCACGGGGGATTCAAGATTGATCGAAATATGCTGCTGTGGATGCTGACGCAGCCAGTCGCCCATATCTTCAAAGACGCTTCT  >  CP009273/472554‑473056

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.