New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP009273	= 850003	39 (1.010)	4 (0.110)	4/292	NT	13.3%	coding (901/1119 nt)	ybiR	putative transporter
	?	CP009273	= 851018	16 (0.450)					coding (183/921 nt)	ldtB	L,D‑transpeptidase linking Lpp to murein

CGTCTTTCTGACGGCGCTGGAGTTCAAACAAGAGCTGTGGGGACTGGTGATTGTGGCGGCAGGCTTTGCGCTGCTGGCACGTCGCGTGGTGCTCAGTGTGGACTGGACGCTGCTGCTGGTGTTTATGGCGATGTTTATCGACGTCCATTTACTGACCCAGCTTCCAGCGTTGCAAGGCGTGTTGGGTAACGTGAGTCATCTATCTGAACCCGGGTTATGGTTAACGGCAATCGGTTTATCGCAGGTGATCAGTAACGTGCCGAGTACCATATTGTTGCTGAACTATGTGCCGCCGTCTTTATTACTGGTATGGGCGGTAAACGTAGGTGGCTTTGGGTTATTACCCGGATCGCTGGCAAATTTGATTGCGCTACGTATGGCGAACGATCGCCGCATCTGGTGGCGTTTCCATCTCTATTCAATACCGATGCTGTTGTGGGCGGCGTTGGTGGGATATGTTTTGTTAGTTATACTCCCGGCCAACTAGGGTCTGGCAAATAAAAAAGGCGGATTATG  >  CP009273/849735‑850250                                                                                                                                                                                                                                                                             |                                                                                                                                                                                                                                                        gtgggttttggcggcggTGGCGGTCACACCAGGGCTGTGGGGACTGGTGATTGTTGCGGCCTGCTTTGTGCGGCTGGCACGTCGCGTGGTGCTCAGTGTGGACTGGACGCTGCTGCTGGTGTTTATGGCGATGTTTATCGACGTCCATTTACTGACCCAGCTTCCAGCGTTGCAAGGCGTGTTGGGTAACGTGAGTCATCTATCTGAACCCGGGTTATGGTTAACGGCAATCGGTTTATCGCAGGTGATCAGTAACGTGCCGAGTACCATAttg                                                                                                                                                                                                                                                    <  2:85433/263‑1 (MQ=255)      ttCTGACGGCGCTGGAGTTCAAACAAGAGCTGTGGGGACTGGTGATTGTGGCGGCAGGCTTTGCGCTGCTGGCACGTCGCGTGGTGCTCAGTGTGGACTGGACGCTGCTGCTGGGGTTTATGGCGATGTTTATCGACGTCCATTTACTGACCCAGCTTCCAGCGTTGCAAGGCGTGTTGGGTAACGTGAGTCAGCTATATGACCCCGGGTTATGGTTAAGGGCAATCGGTTTATCGCAGGTGGTCAGGAACGTTCGGAGTCCCATATTGTTGCTg                                                                                                                                                                                                                                              >  2:301684/1‑275 (MQ=255)         tGACGGCGCTGGAGTTCAAACAAGAGGTGTGGGGACTGGTGATTGTGGCGGCAGGCTTTGCGCTGCTGGCACGTCGCGTGGTGCTCAGTGTGGACTGGACGCTGCTGCTGGTGTTTATGGCGATGTTTATCGACGTCCATTTACTGACCCAGCTTCCAGCGTTGCAAGGCGTGTTGGGTAACGTGAGTCATCTATCTGAACCCGGGTTATGGTTAACGGCAATCGGTTTATCGCAGGTGATCAGTAACGTGCCGAGTACCATATTGTTGCTGaa                                                                                                                                                                                                                                            <  1:301690/274‑1 (MQ=255)                              aaGAGCTGTGGGGACTGGTGATTGTGGCGGCAGGCTTTGCGCTGCTGGCACGTCGCGTGGTGCTCAGTGTGGACTGGACGCTGCTGCTGGTGTTTATGGCGATGTTTATCGACGTCCATTTACTGACCCAGCTTCCAGCGTTGCAAGGCGTGTTGGGTAACGTGAGTCATCTCTCTGAACCCGGGTTATGGTTAACGGCAATCGGTTTATCGCAGGTGATCAGTAACGTGCAGAGTACCATATTGTTGCTGAACTATGTGCCGCGGTCTttattg                                                                                                                                                                                                                      >  2:653180/1‑274 (MQ=255)                                                            gatgttttGCGCTTCTTGTACGTTGCTTGGTGCTTAGTGTTGACTGGCCGCTGCTGCTGGTTTTTATGGCGATGTTTATCTACGTCCATTTNCTGACCCAGCTTCCAGCGTTGCAAGGCATGTTGGGTAACGTGAGTCATCTATCTGAACCCGGGTTATGGTTAACGGCCATCGGTTTATCGCAGGTGATCAGTAACGTGCCGAGTACCATATTGTTGCTGAACTATGTGCCGCCGTCTTTATTACGGGTATGGGCGGTAAACGTAGGTGGCttt                                                                                                                                                                                        <  1:552087/270‑1 (MQ=255)                                                                               atgTCGCGTGGTGCTCAGTGTGGACTGGACGCTGCTGCTGGTGTTTATGGCGATGTTTATCGACGTCCATTTACTGACCCAGCTTCCAGCGTTGCAAGGCGTGTTGGGTAACGTGAGTCATCTATCTGAACCCGGGTTATGGTTAACGGCAATCGGTTTATCGCAGGTGATCAGTAACGTGCCGAGTACCATATTGTTGCTGAACTATGTGCCGCCGTCTTTATTACTGGTATGGGCGGTAAACGTAGGTGGCTTTGGGTTATTACCCGGATCg                                                                                                                                                                      <  1:252223/272‑1 (MQ=255)                                                                                    gactggtgCTCAGTGTTGACTGGACGCTGCTGCTGGTGTTTATGGCGATGTTTATCGACGTCCATTTACTGACCCAGCTTCCAGCGTTGCAAGGCGCGTTGGGTAACGTGAGTCATCTATCTGAACCCGGGTTATGGTTAACGGCAATCGGTTTATCGCAGGTGATCAGTAACGTGCCGAGTACCATATAGTTGCTGAACTATGTGCCGCCGTCTTTATTACTGGTATGGGCGGTAAACGTAGGTGGCTTTGGGTTATTACCCGGATCGCTGGc                                                                                                                                                                 <  1:367134/271‑1 (MQ=255)                                                                                        ggtgCTCAGTGTGGACTGGACGCTGCTGCTGGTGTTTATGGCGATGTTTATCGACGTCCATTTACTGACCCAGCTTCCAGCGTTGCAAGGCGTGTTGGGTAACGTGAGTCATCTATCTGAACCCGGGTTATGGTTAACGGCAATCGGTTTATCGCAGGTGATCAGTAACGTGCCGAGTACCatat                                                                                                                                                                                                                                                      <  1:131190/185‑1 (MQ=255)                                                                                           gCTCAGTGTGGACTGGACGCTGCTGCTGGTGTTTATGGCGATGTTTATCGACGTCCATTTACTGACCCAGCTTCCAGCGTTGCAAGGCGTGTTGGGTAACGTGAGTAATCTATCTGAACCCGGGTTATGGTTAACGGCAATCGGTTTATCGCAGGTGATCAGTAACGTGCCGAGTACCAgatggggctttccaatatgatggaagcgaacccgggtgtggctaccttcctgccgaaaggcggtactgtactgaacattccgcagcnactgcgc                                                                                                                                                           >  2:264287‑M1/1‑179 (MQ=255)                                                                                                          gacGCGGCNGCTGGTGTTTATGGCGATGTTTATCGACGTCCATTTACTGACCCAGCTTCCAGCGTTGCAAGGCGTGTTGGGTAACGTGAGTCATCTATCTGAACCCGGGTTATGGTTAACGGCAATCGGTTTATCGCAGGTGATCAGTCACGTGCCGAGTACCGTATTGTTGCTGGACTATGTGCCGCCGTc                                                                                                                                                                                                                             <  1:524237/192‑1 (MQ=255)                                                                                                           acGCTGCTGCTGGTGTTTATGGCGATGTTTATCGACGTCCATTTACTGACCCAGCTTCCAGCGTTGCAAGGCGTGTTGGGTAACGTGAGTCATCTATCTGAACCCGGGTTATGGTTAACGGCAATCGGTTTATCGCAGGTGATCAGTAACGTGCCGAGTACCATAtt                                                                                                                                                                                                                                                     >  1:349305/1‑167 (MQ=255)                                                                                                           acGCTGCTGCTGGTGTTTATGGCGATGTTTATCGACGTCCATTTACTGACCCAGCTTCCAGCGTTGCAAGGCGTGTTGGGTAACGTGAGTCATCTATCTGAACCCGGGTTATGGTTAACGGCAATCGGTTTATCGCAGGTGATCAGTAACGTGCCGAGTACCATATTGTTGCTGAACTATGTGCCGCCGTCTTTATTACTGGTATGGGCGGTAAACGTAGGTGGCTTTGGGttat                                                                                                                                                                                 >  1:554265/1‑235 (MQ=255)                                                                                                               ttctgctgGNTTTTATGGCGATGTTTATAGACGTCCATTTACTGACCCAGCTTCCAGCGTTGCAAGGCGTGTTGGGTAACGTGAGTCATCTATCTGAACCCGGGTTATGGTTAACGGCAATCGGTTTATCGCAGGTGATCAGTAACGTGCCGAGTACCATATTGCTGCTGAACTATCTGCCGCCGTCTttatt                                                                                                                                                                                                                       <  1:513115/191‑1 (MQ=255)                                                                                                               tgctgctgGTGTTTATGGCGATGTTTATCGACGTCCATTTACTGACCCAGCTTCCAGCGTTGCAAGGCGTGTTGGGTAACGTGAGTCATCTATCTGAACCCGGGTTATGGTTAACGGCAATCGGTTTATCGCAGGTGATCAGTAACGTGCCGAGTACCATATTGTTGCTGAACTATGTGCCGCCGTCTTTATTACTGGTATGGGCGGTAAACGTAGGTGGCTTTGGGTTATTAcc                                                                                                                                                                             <  2:554256/235‑1 (MQ=255)                                                                                                               tgcggcggGTGTTTATGGCGATGTTTATCGACGGCCATTTACTGACCCAGCTTCCAGCGTTGCAAGGCGTGTTGGGTAACGTGAGTCATCTATCTGAACCCGGGTTATGGTTAACGGCAATCGGTTTATCGCAGGTGATCAGTAACGTGCCGAGTACCATAttgttg                                                                                                                                                                                                                                                 <  2:349299/167‑1 (MQ=255)                                                                                                                     tgGTGTTTATGGCGATGTTTATCGACGTCCATTTACTGACCCAGCTTCCAGCGTTGCAAGGCGTGTTGGGTAACGTGAGTCATCTATCTGAACCCGGGTTATGGTTAACGGCAATCGGTTTATCGCAGGTGATCAGTAACGTGCCGAGTACCAgatggggctttccaatatgatggaagcgaacccgggtgtggataccttcctgccgaaaggcggtactgtactgaacattccgcagcagctgatcctgccggataccgttcatgaaggcatc                                                                                                                                <  1:264292‑M1/274‑122 (MQ=255)                                                                                                                                 cGATGTTTATCGACGTCCATTTACTGACCCAGCTTCCAGCGTTGCAAGGCGTGTTGGGTAACGTGAGTCATCTATCTGAACCCGGGTTATGGTTAACGGCAATCGGTTTATCGCAGGTGATCAGTAACGTGCCGAGTACCAgatggggctttccaatatgatggaagcgaacccgggtgtggataccttcctgccga                                                                                                                                                                                                 >  1:450181‑M1/1‑141 (MQ=255)                                                                                                                                   aggTTTTTCGTCTTCCTTTTACTGACCCAGCTTCCAGCGTTGCAAGGCGTGTTGGGTAACGTGAGTCATCTATCTGAACCCGGGTTATGGTTAACGGCAATCGGTTTATCGCAGGTGATCAGTAACGTGCCGAGTACCATATTGTTGCTGAACTATGTGCCGCCGTCTTTATTACTGGTATGGGCGGTAAACGTAGGTGGCTTTGGGTTATTACCCGGATCGCTGGCAAATTTGATTGCGCTACGTATGGCGAACGATCGCCGCATCTGGTGGc                                                                                                                  <  1:299028/272‑1 (MQ=255)                                                                                                                                     gTTTATCGACGTCCATTTACTGACCCAGCTTCCAGCGTTGCAAGGCGTGTTGGGTAACGTGAGTCATCTATCTGAACCCGGGTTATGGTTAACGGCAATCGGTTTATCGCAGGTGATCAGTAACGTGCCGAGTACCAgatggggctttccaatatgatggaagcgaacccgggtgtggataccttcctgccgaaagg                                                                                                                                                                                             <  2:450174‑M1/197‑61 (MQ=255)                                                                                                                                      tgtgtCGATGTCCATTTACTGACCCAGCTTCCAGCGTTGCAATGCGTGTTGGGTAACGTGAGTCAACTATCTGAACCCGGGTTATGGTTAACGGCAATCGGTTTATCGCAGGTGATCAGTAACGTGCCGAGTACCATATTGTTGCTGAACTATGTGCCGCCGTCTTTATTACTGGTATGGGCGGTAAACGTAGGTGGCTTTGGGTTATTACCCGGATCGCTGGCAAATTTGATTGCGCTACGTATGGCGAACGATCGCCGCATCTGGTGGCGtt                                                                                                               <  1:17540/270‑1 (MQ=255)                                                                                                                                                tCCATTTACTGACCCAGCTTCCAGCGTTGCAAGGCGTGTTGGGTAACGTGAGTCATCTATCTGAACCCGGGTTATGGTTAACGGCAATCGGTTTATCGCAGGTGATCAGTAACGTGCCGAGTACCATATTGTTGCTGAACTATGTGCCGCCGTCTttat                                                                                                                                                                                                                        >  1:275956/1‑159 (MQ=255)                                                                                                                                                tCCATTTACTGACCCAGCTTCCAGCGTTGCAAGGCGTGTTGGGTAACGTGAGTCATCTATCTGAACCCGGGTTATGGTTAACGGCAATCGGTTTATCGCAGGTGATCAGTAACGTGCCGAGTACCATATTGTTGCTGAACTATGTGCCGCCGTCTTTATTACTGGTATGGTCGGTAAACGTAGGTGGCTTTGGTTTCTTACCCGGATCGCTGGCAAATTTGATTGCGCTAAGTATGGCGAACGATCGCCTGATTTGGTGGGGGTTCCTTatct                                                                                                      >  2:328371/1‑273 (MQ=255)                                                                                                                                                tCCATTTACTGACCCAGCTTCCAGCGTTGCAAGGCGTGTTGGGTAACGTGAGTCATCTATCTGAACCCGGGTTATGGTTAACGGCAATCGGTTTATCGCAGGTGATCAGTAACGTGCCGAGTACCATATTGTTGCTGAACTATGTGCCGCCGTCTTTATTACTGGTATGGGCGGTAAACGTAGGTGGCTTTGGGTTATTATCCGAATCGCTGGCAAATTTGATGGGGCAACGTAGGGGGAACGATCGCCAGATCTGGGGGGGTTTCCTtcccgtg                                                                                                    >  2:299022/1‑270 (MQ=255)                                                                                                                                                    tttACTGACCCAGCTTCCAGCGTTGCAAGGCGTGTTGGGTAACGTGAGTCATCTATCTGAACCCGGGTTATGGTTAACGGCAATCGGTTTATCGCAGGTGATCAGTAACGTGCCGAGTACCatat                                                                                                                                                                                                                                                      <  2:721047/125‑1 (MQ=255)                                                                                                                                                    tttACTGACCCAGCTTCCAGCGTTGCAAGGCGTGTTGGGTAACGTGAGTCATCTATCTGAACCCGGGTTATGGTTAACGGCAATCGGTTTATCGCAGGTGATCAGTAACGTGCCGAGTACCATATTGTTGCTGAACTATGTGCCGCCGTCTTTATTACt                                                                                                                                                                                                                    <  2:275951/159‑1 (MQ=255)                                                                                                                                                    tttACTGACCCAGCTTCCAGCGTTGCAAGGCGTGTTGGGTAACGTGAGTCATCTATCTGAACCCGGGTTATGGTTAACGGCAATCGGTTTATCGCAGGTGATCAGTAACGTGCCGAGTACCATATTGTTGCTGAACTATGTGCCGCCGTCTTTATTACTGGTATGGGCGGTAAACGTAGGTGGCTTTGGGTTATTACCCGGATCGCTGGCAAATTTGATTGCGCTACGTATGGCGAACGATCGCCGCATCTGGTGGc                                                                                                                  <  1:328377/257‑1 (MQ=255)                                                                                                                                                           aCCCAGCTTCCAGCGTTGCAAGGCGTGTTGGGTAACGTGAGTCATCTATCTGAACCCGGGTTATGGTTAACGGCAATCGGTTTATCGCAGGTGATCAGTAACGTGCCGAGTACCATATTGTTGCTGAACTATGTGCCGCCGTCTTTATTACTGGTATGGGCGGTAAACGTAGGTGGCTTTGGGTTATTACCCGGATCGCTGGCAAATTTGAt                                                                                                                                                        >  2:207864/1‑212 (MQ=255)                                                                                                                                                           aCCCAGCTTCCAGCGTTGCAAGGCGTGTTGGGTAACGTGAGTCATCTACCTGAACCCGGGTTATGGTTAACGGCAATCGGTTTATCGCAGGTGAGCAGTAACGTGCCGAGTACCATATTGTGGCTGAACTATGTGCGCCCGTCTTGATTATTGGCATGGGCGGTAAACGTAGGTGGCTTTGGGTTGTTACCCGGATGGCTGGCAAATTTGATTGCGATTGGTATGGCAAAGGAAGGCGGGAGCTGGTGGGGGTTCCGTCTTTATTAAATAcgg                                                                                           >  2:194561/1‑271 (MQ=255)                                                                                                                                                             ccAGCTTCCAGCGTTGCAAGGCGTGTTGGGTAACGTGAGTCATCTATCTGAACCCGGGTTATGGTTAACGGCAATCGGTTTATCGCAGGTGATCAGTCACGTGCCGAGTACCATATTGTTGCTGAACTATGTGCCCCCGTCTTTATTACTGGTATGGGCGGTAAACGTAGGTGCCTTTGGGTTATTACCCGGATCGCTTGCACATTTGATTGCGCTACTAATGGCGAACGATCGCCGCATCTGGTGGCGTTTCGATCTCTATTCAATACCGCTGc                                                                                       >  2:241335/1‑275 (MQ=255)                                                                                                                                                               aGCTTCCAGCGTTGCAAGGCGTGTTGGGTAACGTGAGTCATCTATCTGAACCCGGGTTATGGTTAACGGCAATCGGTTTATCGCAGGTGATCAGTAACGTGCCGAGTACCATATTGTTGCTGAACTATGTGCCGCCGTCTTTATTACTGGTATGGGCGGTAAACGTAGGTGGCTTTGGGTTATTACCCGGATCGCTGGCAAATTTGATTgcg                                                                                                                                                    <  1:207868/212‑1 (MQ=255)                                                                                                                                                                                            aaCGTGAGTCATCTATCTGAACCCGGGTTATGGTTAACGGCAATCGGTTTATCGCAGGTGATCAGTAACGTGCCGAGTACCATATTGTTGCTGAACTATGTgc                                                                                                                                                                                                                                    >  2:660534/1‑103 (MQ=255)                                                                                                                                                                                              cGTGAGTCATCTATCTGAACCCGGGTTATGGTTAACGGCAATCGGTTTATCGCAGGTGATCAGTAACGTGCCGAGTACCATATTGTTGCTGAACTATGTGCCGCCGTCTTTATTACTGGTATGGGCGGTAAACGTAGGTGGCTTTGGGTTATTACCCGGATCGCTGGCACATTTGATTGCGCTACGTATGGCGAACGATCGCCGACTCTGGTGGCGTTTCCATCTCTCTTCAATACCGATGCTGGTGTNTGCGGGTTtgggggtttttttttctt                                                      >  2:472767/1‑263 (MQ=255)                                                                                                                                                                                                tGAGTCATCTATCTGAACCCGGGTTATGGTTAACGGCAATCGGTTTATCGCAGGTGATCAGTAACGTGCCGAGTACCATATTGTTGCTGAACTATGTgccgcc                                                                                                                                                                                                                                <  1:660543/103‑1 (MQ=255)                                                                                                                                                                                                     cATCTATCTGATCCCTGGTTATGGTTAACGTCAATCGGTTTATCGCAGGTGATCAGTAACGTGCCGAGTACCATATTGTAGCTGAACTATGTGCCGCCGTCTTTATTACTGGTATGGGCGGTAAACGTAGGTGGCTTTGGGTTATTACCCGGATCGCTGGCAAATTTGATTGCGCTACGTATGGCGAACGATCGCCGCATCTGGTGGCGTTTCCATCTCTATTCAATACCGATGCTGTTGTGGGCGGCGTTGGTGGGATATGTTTTgttagtta                                                <  1:355607/274‑1 (MQ=255)                                                                                                                                                                                                                     ggTTATGGTTAACGGCAATCGGTTTATCGCAGGTGATCAGTAACGTGCCGAGTACCATATTGTTGCTGAACTATGTgc                                                                                                                                                                                                                                    >  1:162699/1‑78 (MQ=255)                                                                                                                                                                                                                     ggTTATGGTTAACGGCAATCGGTTTATCGCAGGTGATCAGTAACGTGCCGAGTACCATATTGTTGCTGAACTATGTGCCGCCGTCTTTATTACTGGTATGGGCGGTAAACGTAGGTGGc                                                                                                                                                                                           >  2:333468/1‑119 (MQ=255)                                                                                                                                                                                                                     ggTTATGGTTAACGGCAATCGGTTTATCGCAGGTGATCAGTAACGTGCCGAGTACCATATTGTTGCTGAACTATGTGCCGCCGTCTTTATTACTGGTATGGGCGGTAAACGTAGGTGGCTTTGGGTTATTACCCGGATCGCTGGCAAATTTGATTGCGCTACGTATGGCGAACGATCGCCGCATCTGGTGGCg                                                                                                                 >  2:504997/1‑193 (MQ=255)                                                                                                                                                                                                                         aTGGTTAACGGCAATCGGTTTATCGCAGGTGATCAGTAACGTGCCGAGTACCATATTGTTGCTGAACTATGTgccgcc                                                                                                                                                                                                                                <  2:162696/78‑1 (MQ=255)                                                                                                                                                                                                                         aTGGTTAACGGCAATCGGTTTATCGCAGGTGATCAGTAACGTGCCGAGTACCATATTGTTGCTGAACTATGTGCCGCCGTCTTTATTACTGGTATGGGCGGTAAACGTAGGTGGCTTTg                                                                                                                                                                                       <  1:333474/119‑1 (MQ=255)                                                                                                                                                                                                                         aTGGTTAACGGCAATCGGTTTATCGCAGGTGATCAGTAACGTGCCGAGTACCATATTGTTGCTGAACTATGTGCCGCCGTCTTTATTACTGGTATGGGCGGTAAACGTAGGTGGCTTTGGGTTATTACCCGGATCGCTGGCAAATTTGATTGCGCTACGTATGGCGAACGATCGCCGCATCTGGTGGCGTTTc                                                                                                             <  1:505004/193‑1 (MQ=255)                                                                                                                                                                                                                                aCGGCAATCGGTTTATCGCAGGTGATCAGTAACGTGCCGAGTACCATATTGTTGCTGAACTATGTGCCGCCGTCTTTATTACTGGTATGGGCGGTAAACGTAGGTGGCTTTGGGTTATTACCCGGATCGCTGGCAAATTTGATTGCGCTACGTATGGCGAACGATCGCCGCATCTGGTGGCGTTTcc                                                                                                            >  2:596053/1‑187 (MQ=255)                                                                                                                                                                                                                                    cAATCGGTTTATCGCAGGTGATCAGTAACGTGCCGAGTACCATATTGTTGCTGAACTATGTGCCGCCGTCTTTATTACTGGTATGGGCGGTAAACGTAGGTGGCTTTGGGTTATTACCCGGATCGCTGGCAAATTTGATTGCGCTACGTATGGCGAACGATCGCCGCATCTGGTGGCGTTTCCAtct                                                                                                        <  1:596062/187‑1 (MQ=255)                                                                                                                                                                                                                                       tCGGTTTATCGCAGGTGATCAGTAACGTGCCGAGTACCATATTGTTGCTGAACTATGTgc                                                                                                                                                                                                                                    >  2:608829/1‑60 (MQ=255)                                                                                                                                                                                                                                           tttATCGCAGGTGATCAGTAACGTGCCGAGTACCATATTGTTGCTGAACTATGTgccgcc                                                                                                                                                                                                                                <  1:608838/60‑1 (MQ=255)                                                                                                                                                                                                                                                         tCAGTAACGTGCCGAGTACCATATTGTTGCTGAACTATGTGCCGCCGTCTTTATTACTGGTATGGGCGGTAAACGTAGGTGGCTTTGGGTTATTACCCgg                                                                                                                                                                          >  2:6017/1‑100 (MQ=255)                                                                                                                                                                                                                                                             tAACGTGCCGAGTACCATATTGTTGCTGAACTATGTGCCGCCGTCTTTATTACTGGTATGGGCGGTAAACGTAGGTGGCTTTGGGTTATTACCCGGATCg                                                                                                                                                                      <  1:6017/100‑1 (MQ=255)                                                                                                                                                                                                                                                                   gCCGAGTACCAgatggggctttccaatatgatggaagcgaacccgggtgtggataccttcctgccgaaagg                                                                                                                                                                                             <  1:539567‑M1/71‑61 (MQ=255)                                                                                                                                                                                                                                                                     cGAGTACCAgatggggctttccaatatgatggaagcgaacccgggtgtggataccttcctgccgaaaggcggtactgtactgaacattccgcagcagntgatcctgccggataccgttcatgaaggcatcgtcattaacagtgctgagatgcgtctttattactatccgaaagggaccaacaccgttatcgtgctgccgatcggcattggtcagttaggcaaagatacgcctatcaactggaccaccaaagttgag  <  1:667706‑M1/256‑248 (MQ=255)                                                                                                                                                                                                                                                                       aGTACCATATTGTTGCTGAACTATGTGCCGCCGTCTTTATTACTGGTATGGGCGGTAAACGTAGGTGGCTTTGGGTTATTACCCGGATCGCTGGCAAATTTGATTGCGCTACGTGTGGGTTACGATCGCCGCATCTGGTGGCGTTTCCATCGATATTCAATACCGATGCTGTTTTGGGCGGCGTTGTTGGTTTATGTTTTgtta                                                    >  1:133714/1‑204 (MQ=255)                                                                                                                                                                                                                                                                             |                                                                                                                                                                                                                                                        CGTCTTTCTGACGGCGCTGGAGTTCAAACAAGAGCTGTGGGGACTGGTGATTGTGGCGGCAGGCTTTGCGCTGCTGGCACGTCGCGTGGTGCTCAGTGTGGACTGGACGCTGCTGCTGGTGTTTATGGCGATGTTTATCGACGTCCATTTACTGACCCAGCTTCCAGCGTTGCAAGGCGTGTTGGGTAACGTGAGTCATCTATCTGAACCCGGGTTATGGTTAACGGCAATCGGTTTATCGCAGGTGATCAGTAACGTGCCGAGTACCATATTGTTGCTGAACTATGTGCCGCCGTCTTTATTACTGGTATGGGCGGTAAACGTAGGTGGCTTTGGGTTATTACCCGGATCGCTGGCAAATTTGATTGCGCTACGTATGGCGAACGATCGCCGCATCTGGTGGCGTTTCCATCTCTATTCAATACCGATGCTGTTGTGGGCGGCGTTGGTGGGATATGTTTTGTTAGTTATACTCCCGGCCAACTAGGGTCTGGCAAATAAAAAAGGCGGATTATG  >  CP009273/849735‑850250

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.