New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP009273	895130 =	NA (NA)	12 (0.330)	8/298	NT	25.5%	intergenic (+29/+170)	rlmC/artJ	23S rRNA m(5)U747 methyltransferase, SAM‑dependent/arginine binding protein, periplasmic
	?	CP009273	895266 =	35 (0.960)					intergenic (+165/+34)	rlmC/artJ	23S rRNA m(5)U747 methyltransferase, SAM‑dependent/arginine binding protein, periplasmic

CGCTCAGGGGGATGTGCCGGAGCTGGTGCTGGTTAACCCGCCGCGCCGCGGCATTGGTAAACCGCTGTGTGATTATCTCTCAACGATGGCACCGCGTTTTATCATCTACTCCAGCTGTAACGCCCAAACTATGGCGAAAGATATCCGCGAACTGCCTGGGTTTCGTATTGAACGGGTGCAGCTTTTCGATATGTTCCCGCATACCGCGCACTATGAAGTGCTGACGCTGCTGGTGAAGCAATAAAAAAGCCGCATGTGCGGCTTCAGATTGCTGACAAAGTGCGCGTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAGCGTGCAAATTCAATACATTGCATGGGCCATGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTACCTTTGTCATCAGTCTCAAGCCGCGGTTGCGGCTTTCTGAATCTTACTGTGGGAACCACTGGTCACTGATTTTTTGATAAGTACCGTCAGCTTTAATTGCTGCCAGCGCGTTATTCAGTTTTTCCAG  >  CP009273/894858‑895383                                                                                                                                                                                                                                                                                 |                                                                                                                                                                                                                                                              cGCTCAGGGGGATGTGCCGGAGCTGGTGCTGGTTAACCCGCCGCGCCGCGGCATTGGTAAACCGCTGTGTGATTATCTCTCAACGATGGCACCGCGTTTTATCATCTACTCCAGCTGTAACGCCCAAACTATGGCGAAAGATATCCGCGAACTGCCTGGGTTTCGTATTGAACGGGTGCAGCTTTTCGATATGTTCCCGCATACCGCGCACTATGAAGTGCTGACGCTGCTGGTGAAGCAATAAAAAAGCCGCATGTTCGGCTTCAAATTGCTGa                                                                                                                                                                                                                                                             >  1:336839/1‑275 (MQ=255)      gtattgatggggtatttggtgacacagcggtggtaaacgaatggctgaaaaccaatccacaacttggtgttgctactgagaaagtgaccgatccgcaatattttggcaccggcctgggcatcgctgtacgtccggataacaaagccctgctggaaaaactgaataacgcgctggcagcaattaaagctgacggtacttatcaaaaaatcagtgaccagtggttcccacaggaagattcagaaagccgcnaccgagtctttatactgtTAAcaaaa                                                                                                                                                                                                                                                        <  2:468622‑M1/8‑2 (MQ=255)              gtgCCGGAGCTGGTGCTGGTTAACCCGCCGCGCCGCGGCATTGGTAAACCGCTGTGTGATTATCTCTCAACGATGGCACCGCGTTTTATCATCTACTCCAGCTGTAACGCCCAAACTATGGCGAAAGATATCCGCGAACTGCCTGGGTTTCGTATTGCACGGGTGCAGCTTTTCGATATGTTCCCGCATACCGCGCACTATGAAGTGCTGACGCTGCTGGTGAAGCAATAAAAACGCCGCATGTGCGGCTTCAGATTTCGGAccacgggcgtgtc                                                                                                                                                                                                                                                >  2:13129/1‑263 (MQ=255)                         ggtgctggtTAACCCGCCGCGCCGCGGCATTGGTAAACCGCTGTGTGATTATCTCTCAACGATGGCACCGCGTTTTATCATCTACTCCAGCTGTAACGCCCAAACTATGGCGAAAGATATCATCGAACTGCCTGGGTTTCGTATTGAACGGGTGCAGCTTTTCGATATGTTCCCGCATACCGCGCACTATGAAGTGCTGACGCTGCTGGTGAAGCAATAAAAAAGCCGCATGTGCGGATTCAGCTTGCTGACAAAGTGCGCtttgaggagtgagt                                                                                                                                                                                                                                     >  2:114731/1‑265 (MQ=255)                              tggtTAACCCGCCGCGCCGCGGCATTGGTAAACCGCTGTGTGATTATCTCTCAACGATGGCACCGCGTTTTATCATCTTCTCCAGCTGTAACGCCCAAACTATGGCGAAAGATATCCGCGAGCTGCCTGGGTTTCGTATTGAACGGGTGCAGCTTTTCGATATGTTCCCGCATACCGCGCACTATGAAGTGCTGACGCTGCTGGTGAAGCAATAAAAAAGCCGCATCTGCGGCTTCAGATTGCTGACAAAGTGCGCGTTGTTTATGCCGGATgc                                                                                                                                                                                                                                 <  1:684578/274‑1 (MQ=255)                                     cccGCCGCGCCGCGGCATTGGTAAACCGCTGTGTGATTATCTCTCAACGATGGCACCGCGTTTTATCATCTACTCCAGCTGTAACGCCCAAACTATGGCGAAAGATATCCGCGAACTGCCTGGGTTTCGTATTGAACGGGTGCAGCTTTTCGATATGTTCCCGCATACCGCGCACTCTGAAGTGCTGACGCTGCTGGTGCAGCAATAAAAAAGCCGCAAGTGCGGCTTCAGATTGCTGAAAAAGTGCGCGTTGTTTATGGCGTNTgtgtccga                                                                                                                                                                                                                           >  2:69466/1‑266 (MQ=255)                                      gtaaacgaatggctgaaaaccaatccacaacttggtgttgctactgagaaagtgaccgatccgcaatattttggcaccggcctgggcatcgctgtacgtccggataacaaagccctgctggaaaaactgaataacgcgctggcagcaattaaagctgacggtacttatcaaaaaatcagtgaccagtggttcccacagtaagattcagaaagccgcaaccgcggcttgagactgaTGAc                                                                                                                                                                                                                                                            <  2:278902‑M1/4‑1 (MQ=255)                                          acgaatggctgaaaaccaatccacaacttggtgttgctactgagaaagtgaccgatccgcaatattttggcaccggcctgggcatcgctgtacgtccggataacaaagccctgctggaaaaactgaataacgcgctggcagcaattaaagctgacggtacttatcaaaaaatcagtgaccagtggttcccacagtaagattcagaaagccgcaaccgcggcttgagactgaTGACAAAg                                                                                                                                                                                                                                                        >  1:278907‑M1/232‑239 (MQ=255)                                                                gctttttgATTATCTCTTAACGATGGCACCGTGTTTTATCATCTACTCCAGCTGTAACGCCCAAACTATGGCGAAAGATATCCGCGAATTGCCTGGGTTTCGTATTGAACGGGTGCAGCTTTTCGATATGTTCCCGCATACCGCGCACTATGAAGTGCTGACGCTGCTGGTGAAGCAATAAAAAAGCCGCATGTGCGGCTTCAGATTGCTGACAAAGTGCGCGTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAGCGTGc                                                                                                                                                                                              <  1:270637/269‑1 (MQ=255)                                                                 agacgagaccggctctaAACAATGGCACCGCTTTTTATCATCTACCCCAGCTGTAACGCCGAAACTATGGAGAAAGCTATCCGAGAACTGCCTGTGTTTCGTATTGAGCGGGTGCAGCTTTTCGATATGTTCCCGCATACCGCGCACTATGAAGTGCTGACGCTGCTGGTGAAGCAATAAAAAAGCCGCATGTGCGGCTTCAGATTGCTGACAAAGTGCGCGTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAGCGTGc                                                                                                                                                                                              <  2:145494/262‑1 (MQ=38)                                                                  tatgtacttATCGCTCACCGAGGGACCCGCGTTTTCGCAGCTACCCCCGATGTAACGGCCAAACTCTGGCGAAGGCTAGCCGCGACCTGCCTAGGTTACCTAGTGACGGGGGGCAGATTTTCGGTATGTGCCCGAATACCGCGACATATGACGTGCTGACGATGCTGGTGAATAAATAACAAAGCCGCATGTGCGGCTTCAGAGTGCTGACAGAGTGCGCGTTGTTTATGCCGGATGCGGCGTAAACGCCTCATCCGGCCTACAAAAGCGTGc                                                                                                                                                                                              <  2:320581/266‑1 (MQ=255)                                                                    tgtgATTATCTCTCAACGATGGCACCGCGTTTTATCATCTACTCCAGCTGTAACGCCCAAACTATGGCGAAAGATATCCGCGAACTGCCTGGGTTTCGTATTGAACGGGTGCAGCTTTTCGATATGTTCCCGCATACCGCGCACTATGAAGTGCTGACGCTGCTGGTGAAGCAATAAAAAAGCCGCATGTGCGGCTTCAGATTGCTGACAAAGTGCGCGTTGTTTATGCCGGATGCGGGGTAACCGCCTTATCCGGCCTACAACAGCGTGCAAAt                                                                                                                                                                                          >  2:656041/1‑275 (MQ=255)                                                                        tttttctctcAACGATGGCACCGCGTTTTATCATCTACTCCAGCTTTAACGCCCAAACTATGGCGAAAGATATCCGCGAACTGCCTGGGTTTCGTATTGAACGGGTGCAGCTTTTNGATATGTTCCTGCATACCGCGCCCTATGAAGTGCTGACGCTGCTGGTGAAGCAATAAAAAAGCCGCATGTGCGGCTTCAGATTGCTGACAAAGTGCGCGTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAGCGTGCAAATTCa                                                                                                                                                                                       <  1:656050/270‑1 (MQ=255)                                                                           atctagccaCGATGGCACCGCGTTTTCTCATCTACTCCAGCGGGAACGCCCAAACTATGGCGAAAGATATCCGCGAACTGCCTGGGTTTCGTATTGAACGGGTGCAGCTTTTCGATATGTTCCCGCATACCGCGCACTATGAAGTGCTGACGCTGCTGGTGAAGCAATAAAAAAGCCGCATGTGCGGCTTCAGATTGCTGACAAAGTGCGCGTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAGCGTGCAAATTCAATAc                                                                                                                                                                                   <  2:104982/267‑1 (MQ=255)                                                                                       tGGCACCGCGTTTTATCATCTACTCCAGCTGTAACGCCCAAACTATGGCGAAAGATATCCGCGAACTGCCTGGGTTTCGTATTGAACGGGTGCAGCTTTTCGATATGTTCCCGCATACCGCGCACTATGAAGTGCTGACGCTGCTGGTGAAGCAATAAAAAAGCCGCATGTGCGGCTTCAGATTGCTGACAAAGTGCGCGTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAGc                                                                                                                                                                                                  >  1:145495/1‑248 (MQ=255)                                                                                                                caccggcctgggcatcgctgtacgtccggataacaaagccctgctggaaaaactgaataacgcgctggcagcaattaaagctgacggtacttatcaaaaaatcagtgaccagtggttcccacagtaagattcagaaagccgcaaccgcggcttgagactgaTGACAAAGTGCGCGTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAGCGTGCAAATTCAATACATTGCATGGGCCCTGGAGGACTGACAAACGTAgcgc                                                                                                                                               <  2:127781‑M1/113‑1 (MQ=255)                                                                                                                  gCTGTAACGCCCAAACTATGGCGAAAGATATCCGCGAACTGCCTGGGTTTCGTATTGAACGGGTGCAGCTTTTCGATATGTTCCCGCATACCGCGCACTATGAAGTGCTGACGCTGCTGGTGAAGCAATAAAAAAGCCGCATGTGCGGCTTCAGATTGCTGACAAAGTGCGCGTTGTTTATGCCGGATGCGGCGTAAACGACTTATCCGGCCTACAAAAGCGCGCAAAATCAATACATGGCATGGGCCATGTAGGCCTGATAAGGGTAGCGGATc                                                                                                                                            >  1:54154/1‑275 (MQ=255)                                                                                                                    ggcctgggcatcgctgtacgtccggataacaaagccctgctggaaaaactgaataacgcgctggcagcaattaaagctgacggtacttatcaaaaaatcagtgaccagtggttcccacagtaagattcagaaagccgcaaccgcggcttgagactgaTGACAAAGTGCGCGTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAGCGTGCAAATTCAATACATTGCATGGGCCATGTAGGCCTGATAAGCGTAGCGCATCAg                                                                                                                                          >  1:127782‑M1/158‑275 (MQ=255)                                                                                                                               cgctgtacgttcggataacaaagccctgctggaaaaactgaataacgcgctggcagcaattaaagctgacggtacttatcaaaaaatcagtgaccagtggttcccacagtaagattcagaaagccgcaaccgcggcttgagactgaTGACAAAGTGCGCGTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAGc                                                                                                                                                                                                  <  1:699486‑M1/62‑1 (MQ=255)                                                                                                                                aCTATGGCGAAAGATATCCGCGAACTGCCTGGGTTTCGTATTGAACGGGTGCAGCTTTTCGATATGTTCCCGCATACCGCGCACTATGAAGTGCTGACGCTGCTGGTGAAGCAATAAAAAAGCCGCATGTGCGGCTTCAGATTGCTGACAAAGTGCGCGTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAGCGTGCAAATTCAATACAt                                                                                                                                                                                 >  1:451379/1‑224 (MQ=255)                                                                                                                                  tATGGCGAAAGATATCCGCGAACTGCCTGGGTTTCGTATTGAACGGGTGCAGCTTTTCGATATGTTCCCGCATACCGCGCACTATGAAGTGTTGACGCTGCTGGTGAAGCAATAAAAAAGCCGCATGTGCGGCTTCAGATTGCTGACAAAGTGCGCGTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAGCGTGCAAATTCAATACATTGCATGGGCCATGTAGGcc                                                                                                                                                              <  1:585124/241‑1 (MQ=255)                                                                                                                                   gtacgtccggataacaaagccctgctggaaaaactgaataacgcgctggcagcaattaaagctgacggtacttatcaaaaaatcagtgaccagtggttcccacagtaagattcagaaagccgcaaccgcggcttgagactgaTGACAAAGTGCGCGTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAGCGTGc                                                                                                                                                                                              >  2:699477‑M1/143‑208 (MQ=255)                                                                                                                                    tGGCGAAAGATATCCGCGAACTGCCTGGGTTTCGTATTGAACGGGTGCAGCTTTTCGATATGTTCCCGCATACCGCGCACTATGAAGTGCTGACGCTGCTGGTGAAGCAATAAAAAAGCCGCATGTGCGGCTTCAGATTGCTGACAAAGTGCGCGTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAGCGTGCAAATTCAATACATTGCa                                                                                                                                                                             <  2:451372/224‑1 (MQ=255)                                                                                                                                     ggCGAAAGATATCCGCGAACTGCCTGGGTTTCGTATTGAACGGGTGCAGCTTTTCGATATGTTCCCGCATACCGCGCACTATGAAGTGCTGACGCTGCTGGTGAAGCAATAAAAAAGCCGCATGTGCGGCTTCAGATTGCTg                                                                                                                                                                                                                                                              >  2:181703/1‑142 (MQ=255)                                                                                                                                        agatacgtcttgcgTACGGCCTGTGTTTCTTCTTTATCGGGTTCAGCTTTTCTATTCGTTCCCGCTTACCGCGCACTATGAAGTGCTGACGCTGCTTGTGAAGCAATAGAAAAGCCGCATGTGCTGCTTCAGATTGCTGACAAAGTGCGCGTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAGCGTGCAAATTCAATACATTGCATGGGCCATGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTACCTTTGtcat                                                                                                                       <  2:150352/263‑1 (MQ=25)                                                                                                                                         aaaGATATCCGCGAACTGCCTGGGTTTCGTATTGAACGGGTGCAGCTTTTCGATATGTTCCCGCATACCGCGCACTATGAAGTGCTGACGCTGCTGGTGAAGCAATAAAAAAGCCGCATGTGCGGCTTCAGATTGCTGACaa                                                                                                                                                                                                                                                          <  1:181706/142‑1 (MQ=255)                                                                                                                                                           ctggaaaaactgaataacgcgctggcagcaattaaagctgacggtacttatcaaaaaatcagtgaccagtggttcccacagtaagattcagaaagccgcaaccgcggcttgagactgaTGACAAAGTGCGCGTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAGCGTGCAAATTCAATACATTGc                                                                                                                                                                              <  1:429064‑M1/82‑1 (MQ=255)                                                                                                                                                           ccTGGGTTTCGTATTGAACGGGTGCAGCTTTTCGATATGTTCCCGCATACCGCGCACTATGAAGTGCTGACGCTGCTGGTGAAGCAATAAAAAAGCCGCATGTGCGGCTTCAGATTGCTGACAAAGTGCGCGTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAGAGTGCAAATTCAATACATTGCATGGGCCATGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTACCTTTGTCATAAGTATCAAGcatggatctt                                                                                                   >  1:150353/1‑266 (MQ=255)                                                                                                                                                               ggTTTCGTATTGAACGGGTGCAGCTTTTCGATATGTTCCCGCATACCGCGCACTATGAAGTGCTGACGCTGCTGGTGAAGCAATAAAAAAGCCGCATGTGCGGCTTCAGATTGCTGACAAAGTGCGCGTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAGCGTGCAAATTCAATACATTGCATggg                                                                                                                                                                         <  1:381064/201‑1 (MQ=255)                                                                                                                                                               aaaaactgaataacgcgctggcagcaattaaagctgacggtacttatcaaaaaatcagtgaccagtggttcccacagtaagattcagaaagccgcaaccgcggcttgagactgaTGACAAAGTGCGCGTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAGCGTGCAAATTCAATACATTGCATgg                                                                                                                                                                          >  2:429057‑M1/115‑200 (MQ=255)                                                                                                                                                                   tCGTATTGAACGGGTGCAGCTTTTCGATATGTTCCCGCATACCGCGCACTATGAAGTGCTGACGCTGCTGGTGAAGCAATAAAAAAGCCGCATGTGCGGCTTCAGATTGCTGACAAAGTGCGCGTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAGCGTGCAAATTCAATACATTGCATGGGCCATGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTACCTTTGTCCTCCGTCTCCAGCCGCGGTTGCGGCt                                                                                               >  1:446944/1‑271 (MQ=255)                                                                                                                                                                   tCGTATTGAACGGGTGCAGCTTTTCGATATGTTCCCGCATACCGCGCACTATGAAGTGCTGACGCTGCTGGTGAAGCAATAAAAAAGCCGCATGTGCGGCTTCAGATTGCTGACAAAGTGCGCGTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAGCGTGCAAATTCAATACATTGCATGGGCCATGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTACCTTTGTCATCAGTCTCAAGCCGCGGTTGCGGCTTTCt                                                                                           <  1:114732/275‑1 (MQ=255)                                                                                                                                                                    ggTAGTGAAGGGGTGGAGAGTTTAGCTATGGTCCCGCATACCGCGNACTATGAAGGGCTGAAGCTGCTGGTGAAGCAATAAAAGAGCCGCAGGTGCGGCCTCAGATTGCTTACAAAGTGCGCGGTGTTTCTGCCGGATGCGGCGTAAACGCCTTACCCGGCCGACAAACGCGTGCAAATCCAATACATTGCATGGGCCATGCAGGCCTGATAAGCGTAGCGCATCAGGCAACTTTACCTTTGTCATCAGTCTCAATCCGCGGTTGCGGCGTTCt                                                                                           <  2:446937/273‑1 (MQ=25)                                                                                                                                                                         tGAACGGGTGCAGCTTTTCGATATGTTCCCGCATACCGCGCACTATGAAGTGCTGACGCTGCTGGTGAAGCAATAAAAAAGCCGCATGTGCGGCTTCAGATTGCTGACAAAGTGCGCGTTGTTTATGCCGGa                                                                                                                                                                                                                                    >  2:431179/1‑132 (MQ=255)                                                                                                                                                                           aaCGGGTGCAGCTTTTCGATATGTGCCCGCATACCGCGCACTATGAAGTGCTGACGCTGCTGGTGAAGCAATAAAAAAGCCGCATGTGCGGCTTCAGATTGCTGACAAAGTGCGCGTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAGCGTGCAAATTCAATACATTGCATGGGCCATGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTACCTTCGTCATCAGTCTCAAGCCGCGGTTGCGGCTTTCTGAATCTTa                                                                                   <  1:69467/275‑1 (MQ=255)                                                                                                                                                                             cGGGTGCAGCTTTTCGATATGTTCCCGCATACCGCGCACTATGAAGTGCTGACGCTGCTGGTGAAGCAATAAAAAAGCCGCATGTGCGGCTTCAGATTGCTGACAAAGTGCGCGTTGTTTATGCCGGATgcg                                                                                                                                                                                                                                <  1:431186/132‑1 (MQ=255)                                                                                                                                                                                                            ccGCGCACTATGAAGTGCTGACGCTGCTGGTGAAGCAATAAAAAAGCCGCATGTGCGGCTTCAGATTGCTGACAAAGTGCGCGTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAGCGTGCAAATTCAATACATTGCATGGGCCATGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTACCTTTGTCATCAGTCTCAAGCCGCGGTTGCGGCTTTCTGAATCTTACTGTGGGAACCACTGGTCACTGATTTTTTGAt                                                   <  1:13129/274‑1 (MQ=255)                                                                                                                                                                                                              caaaaaatcagtgaccagtggttcccacagtaagattcagaaagccgcaaccgcggcttgagactgat                                                                                                                                                                                                                                                               >  1:119087‑M1/68‑68 (MQ=255)                                                                                                                                                                                                               cgcACTATGAAGTGCTGACGCTGCTGGTGAAGCAATAAAAAAGCCGCATGTGCGGCTTCAGATTGCTGACaa                                                                                                                                                                                                                                                          >  2:576889/1‑72 (MQ=255)                                                                                                                                                                                                                   cTATGAAGTGCTGACGCTGCTGGTGAAGCAATAAAAAAGCCGCATGTGCGGCTTCAGATTGCTGACAAAGTg                                                                                                                                                                                                                                                      <  1:576898/72‑1 (MQ=255)                                                                                                                                                                                                                              tGACGCTGCTGGTGAAGCAATAAAAAAGCCGCATGTGCGGCTTCAGATTGCTGACAAAGTGCGCGTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTAc                                                                                                                                                                                                        >  2:674484/1‑107 (MQ=255)                                                                                                                                                                                                                                  gctgctGGTGAAGCAATAAAAAAGCCGCATGTGCGGCTTCAGATTGCTGACAAAGTGCGCGTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACaaaa                                                                                                                                                                                                    <  1:674493/107‑1 (MQ=255)                                                                                                                                                                                                                                                            gCATGTGCGGCTTCAGATTACTGACAAAGTGCGCGTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAGCGTGCAAATTCAATACATTGCATGGGCCATGTAGGCCTGATAAGCGTAGCCCATCAGGCAATTTTACGCTTGTCATCAGTCTCAAGCCGCGGTTGCGGCTGAATGGATCTGACTGTGGGAACCACTGGTCACTGATTTTTTGATAAGTACCGTCAGCTTTAATTGCTGCAAGCGCGTTATTCAATTTTTAcag  >  1:572168/1‑275 (MQ=37)                                                                                                                                                                                                                                                                       ttgagactgaTGACAAAGTGCGCGTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAGc                                                                                                                                                                                                  <  1:355051‑M1/62‑1 (MQ=255)                                                                                                                                                                                                                                                                       ttgagactgaTGACAAAGTGCGCGTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAGCGTGCAAATTCAATACa                                                                                                                                                                                  <  2:257737‑M1/78‑1 (MQ=255)                                                                                                                                                                                                                                                                       ttgagactgaTGACAAAGTGCGCGTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAGCGTGCAAATTCAATACATTGCATGGGCCATGTAGGCCTGATAAGCGTAGCGCa                                                                                                                                              <  2:288641‑M1/114‑1 (MQ=255)                                                                                                                                                                                                                                                                       ttCAGATTGCTGACAAAGTGCGCGTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAGCGTGCAAATTCAATACATTGCATGGGCCATGTAGGCCTGATAAGCGTAGCGCa                                                                                                                                              >  1:683493/1‑124 (MQ=255)                                                                                                                                                                                                                                                                           gactgaTGACAAAGTGCGCGTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAGCGTGc                                                                                                                                                                                              >  2:355045‑M1/7‑72 (MQ=255)                                                                                                                                                                                                                                                                           gactgaTGACAAAGTGCGCGTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAGCGTGCAAATTCAATACATTGc                                                                                                                                                                              >  1:257742‑M1/7‑88 (MQ=255)                                                                                                                                                                                                                                                                           gactgaTGACAAAGTGCGCGTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAGCGTGCAAATTCAATACATTGCATGGGCCATGTAGGCCTGATAAGCGTAGCGCATCAg                                                                                                                                          >  1:288646‑M1/7‑124 (MQ=255)                                                                                                                                                                                                                                                                           gATTGCTGACAAAGTGCGCGTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAGCGTGCAAATTCAATACATTGCATGGGCCATGTAGGCCTGATAAGCGTAGCGCATCAg                                                                                                                                          <  2:683484/124‑1 (MQ=255)                                                                                                                                                                                                                                                                                cTGACAAAGTGCGCGTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAGCGTGCAAATTCaa                                                                                                                                                                                      >  2:378512/1‑75 (MQ=40)                                                                                                                                                                                                                                                                                 |                                                                                                                                                                                                                                                              CGCTCAGGGGGATGTGCCGGAGCTGGTGCTGGTTAACCCGCCGCGCCGCGGCATTGGTAAACCGCTGTGTGATTATCTCTCAACGATGGCACCGCGTTTTATCATCTACTCCAGCTGTAACGCCCAAACTATGGCGAAAGATATCCGCGAACTGCCTGGGTTTCGTATTGAACGGGTGCAGCTTTTCGATATGTTCCCGCATACCGCGCACTATGAAGTGCTGACGCTGCTGGTGAAGCAATAAAAAAGCCGCATGTGCGGCTTCAGATTGCTGACAAAGTGCGCGTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAGCGTGCAAATTCAATACATTGCATGGGCCATGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTACCTTTGTCATCAGTCTCAAGCCGCGGTTGCGGCTTTCTGAATCTTACTGTGGGAACCACTGGTCACTGATTTTTTGATAAGTACCGTCAGCTTTAATTGCTGCCAGCGCGTTATTCAGTTTTTCCAG  >  CP009273/894858‑895383

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.