New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP009273	895130 =	NA (NA)	12 (0.330)	8/298	NT	25.5%	intergenic (+29/+170)	rlmC/artJ	23S rRNA m(5)U747 methyltransferase, SAM‑dependent/arginine binding protein, periplasmic
	?	CP009273	895266 =	35 (0.960)					intergenic (+165/+34)	rlmC/artJ	23S rRNA m(5)U747 methyltransferase, SAM‑dependent/arginine binding protein, periplasmic

GAAAGATATCCGCGAACTGCCTGGGTTTCGTATTGAACGGGTGCAGCTTTTCGATATGTTCCCGCATACCGCGCACTATGAAGTGCTGACGCTGCTGGTGAAGCAATAAAAAAGCCGCATGTGCGGCTTCAGATTGCTGACAAAGTGCGCGTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAGCGTGCAAATTCAATACATTGCATGGGCCATGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTACCTTTGTCATCAGTCTCAAGCCGCGGTTGCGGCTTTCTGAATCTTACTGTGGGAACCACTGGTCACTGATTTTTTGATAAGTACCGTCAGCTTTAATTGCTGCCAGCGCGTTATTCAGTTTTTCCAGCAGGGCTTTGTTATCCGGACGTACAGCGATGCCCAGGCCGGTGCCAAAATATTGCGGATCGGTCACTTTCTCAGTAGCAACACCAAGTTGTGGATTGGTTTTCAGCCATTCGTTTACCACCGCTGTGTCACCAAATACCCCATCAATAC  >  CP009273/894993‑895532                                                                                                                                                                                                                                                                                  |                                                                                                                                                                                                                                                                           agatacgtcttgcgTACGGCCTGTGTTTCTTCTTTATCGGGTTCAGCTTTTCTATTCGTTCCCGCTTACCGCGCACTATGAAGTGCTGACGCTGCTTGTGAAGCAATAGAAAAGCCGCATGTGCTGCTTCAGATTGCTGACAAAGTGCGCGTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAGCGTGCAAATTCAATACATTGCATGGGCCATGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTACCTTTGtcat                                                                                                                                                                                                                                                                            <  2:150352/263‑1 (MQ=25)                    ccTGGGTTTCGTATTGAACGGGTGCAGCTTTTCGATATGTTCCCGCATACCGCGCACTATGAAGTGCTGACGCTGCTGGTGAAGCAATAAAAAAGCCGCATGTGCGGCTTCAGATTGCTGACAAAGTGCGCGTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAGAGTGCAAATTCAATACATTGCATGGGCCATGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTACCTTTGTCATAAGTATCAAGcatggatctt                                                                                                                                                                                                                                                        >  1:150353/1‑266 (MQ=255)                            tCGTATTGAACGGGTGCAGCTTTTCGATATGTTCCCGCATACCGCGCACTATGAAGTGCTGACGCTGCTGGTGAAGCAATAAAAAAGCCGCATGTGCGGCTTCAGATTGCTGACAAAGTGCGCGTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAGCGTGCAAATTCAATACATTGCATGGGCCATGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTACCTTTGTCCTCCGTCTCCAGCCGCGGTTGCGGCt                                                                                                                                                                                                                                                    >  1:446944/1‑271 (MQ=255)                            tCGTATTGAACGGGTGCAGCTTTTCGATATGTTCCCGCATACCGCGCACTATGAAGTGCTGACGCTGCTGGTGAAGCAATAAAAAAGCCGCATGTGCGGCTTCAGATTGCTGACAAAGTGCGCGTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAGCGTGCAAATTCAATACATTGCATGGGCCATGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTACCTTTGTCATCAGTCTCAAGCCGCGGTTGCGGCTTTCt                                                                                                                                                                                                                                                <  1:114732/275‑1 (MQ=255)                             ggTAGTGAAGGGGTGGAGAGTTTAGCTATGGTCCCGCATACCGCGNACTATGAAGGGCTGAAGCTGCTGGTGAAGCAATAAAAGAGCCGCAGGTGCGGCCTCAGATTGCTTACAAAGTGCGCGGTGTTTCTGCCGGATGCGGCGTAAACGCCTTACCCGGCCGACAAACGCGTGCAAATCCAATACATTGCATGGGCCATGCAGGCCTGATAAGCGTAGCGCATCAGGCAACTTTACCTTTGTCATCAGTCTCAATCCGCGGTTGCGGCGTTCt                                                                                                                                                                                                                                                <  2:446937/273‑1 (MQ=25)                                    aaCGGGTGCAGCTTTTCGATATGTGCCCGCATACCGCGCACTATGAAGTGCTGACGCTGCTGGTGAAGCAATAAAAAAGCCGCATGTGCGGCTTCAGATTGCTGACAAAGTGCGCGTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAGCGTGCAAATTCAATACATTGCATGGGCCATGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTACCTTCGTCATCAGTCTCAAGCCGCGGTTGCGGCTTTCTGAATCTTa                                                                                                                                                                                                                                        <  1:69467/275‑1 (MQ=255)                                                                     ccGCGCACTATGAAGTGCTGACGCTGCTGGTGAAGCAATAAAAAAGCCGCATGTGCGGCTTCAGATTGCTGACAAAGTGCGCGTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAGCGTGCAAATTCAATACATTGCATGGGCCATGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTACCTTTGTCATCAGTCTCAAGCCGCGGTTGCGGCTTTCTGAATCTTACTGTGGGAACCACTGGTCACTGATTTTTTGAt                                                                                                                                                                                                        <  1:13129/274‑1 (MQ=255)                                                                                                                     gCATGTGCGGCTTCAGATTACTGACAAAGTGCGCGTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAGCGTGCAAATTCAATACATTGCATGGGCCATGTAGGCCTGATAAGCGTAGCCCATCAGGCAATTTTACGCTTGTCATCAGTCTCAAGCCGCGGTTGCGGCTGAATGGATCTGACTGTGGGAACCACTGGTCACTGATTTTTTGATAAGTACCGTCAGCTTTAATTGCTGCAAGCGCGTTATTCAATTTTTAcag                                                                                                                                                       >  1:572168/1‑275 (MQ=37)                                                                                                                                                      cgTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAGCGTGCAAATTCAATACATTGCATGGGCCATGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTACCTTTGTCATCAGTCTCAAGCCGCGGTTGCGGCTTTCTGAATCTTACTGTGGGAACCACTGGTCACTGATTTTTTGATAAGTAc                                                                                                                                                                                                  >  1:437226/1‑199 (MQ=255)                                                                                                                                                          gttTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAGCGTGCAAATTCAATACATTGCATGGGCCATGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTACCTTTGTCATCAGTCTCAAGCCGCGGTTGCGGCTTTCTGAATCTTACTGTGGGAACCACTGGTCACTGATTTTTTGATAAGTACCGTc                                                                                                                                                                                              <  2:437219/199‑1 (MQ=255)                                                                                                                                                            ctgatgcgctacgcttatcaggcctacatggcccatgcaatgtattgaatttgcacgcttttgtaggccggataaggcgtttacgccgcatccggcataaacaacgcgcactttgtcaTCAGtc                                                                                                                                                                                                                                                                       >  1:288646‑M2/119‑124 (MQ=255)                                                                                                                                                            ctgatgcgctacgcttatcaggcctacatggcccatgcaatgtattgaatttgcacgcttttgtaggccggataaggcgtttacgccgcatccggcataaacaacgcgcactttgtcaTCAGTCTCAAGCCGCGGTTGCGGCTTTCTGAATCTTACTGTGGGAACCACTGGTCACTGATTTTTTGATAAGTACCGTCAGCTTTAATTGCTGCCAGCGCGTTATTCAGTTTTTCCAGCAGGGCTTTGTTATCCGGACGTACAGCGATGCCCAGGcc                                                                                                                >  1:127782‑M2/119‑275 (MQ=255)                                                                                                                                                                tgcgctacgcttatcaggcctacatggcccatgcaatgtattgaatttgcacgcttttgtaggccggataaggcgtttacgccgcatccggcataaacaacgcgcactttgtcaTCAGTCTCaa                                                                                                                                                                                                                                                                   <  2:288641‑M2/10‑1 (MQ=255)                                                                                                                                                                 gcgctacgtttgtcagtcctccagggcccatgcaatgtattgaatttgcacgcttttgtaggccggataaggcgtttacgccgcatccggcataaacaacgcgcactttgtcaTCAGTCTCAAGCCGCGGTTGCGGCTTTCTGAATCTTACTGTGGGAACCACTGGTCACTGATTTTTTGATAAGTACCGTCAGCTTTAATTGCTGCCAGCGCGTTATTCAGTTTTTCCAGCAGGGCTTTGTTATCCGGACGTACAGCGATGCCCAGGCCGGTg                                                                                                            <  2:127781‑M2/161‑1 (MQ=255)                                                                                                                                                                   ccacgtggcgTCACCTCCTTCTCCGGCCTCCAATAGCGTGCAAATTCAATTCATTGCATGGTCAATTTAGGCCTGATAACCGTAGCGCATCAGGCAATTTTACCTTTGTCATCAGTCTCACGCTGCGGGTGCTGCTTCATGAACCTTACTGTGGGAACCACTGGTCACTGATTTTTTGATAAGTACCGTCAGCTTTAATTGCGGCCAGCGCGTTATTCAGTTTTTCCAGATGGGCTTTGTTATCCGGACGTACAGCGATGCCCAGGCCGGTGCCa                                                                                                         <  2:572159/269‑1 (MQ=255)                                                                                                                                                                                     ttATCCGGCCTACAAAAGCGTGCAAATTCAATACTTTGCATGGGCCATGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTACCTTTGTCATCAGTCTCAAGCCGCGGTTGCGGCTTTCTGAATCTTACTGTGGGAACCACTGGTCACTGATTTTTTGATAAGTACCGACAGCTTTAATTGNTGCCAGCGNGTTATTCAGTTTTTCCAGCAGGGCTTTGTTATCCGGACGTACAGCGATGCCCAGGCCGGTGCCAAAATATTGCGGATCGGTc                                                                                       >  1:468629/1‑275 (MQ=255)                                                                                                                                                                                            ccatgcaatgtattgaatttgcacgcttttgtaggccggataaggcgtttacgccgcatccggcataaacaacgcgcactttgtcaTCAGTCTCAAGCCGCGGTTGCGGCTTTCTGAATCTTACTGTGGGAACCACTGGTCACTGATTTTTTGATAAGTACCGTCAGCTTTAATTGCTGCCAGCGCGTTATTCAGttttt                                                                                                                                                           >  2:429057‑M2/87‑200 (MQ=255)                                                                                                                                                                                                gcaatgtattgaatttgcacgcttttgtaggccggataaggcgtttacgccgcatccggcataaacaacgcgcactttgtcaTCAGtc                                                                                                                                                                                                                                                                       >  1:257742‑M2/83‑88 (MQ=255)                                                                                                                                                                                                gcaatgtattgaatttgcacgcttttgtaggccggataaggcgtttacgccgcatccggcataaacaacgcgcactttgtcaTCAGTCTCAAGCCGCGGTTGCGGCTTTCTGAATCTTACTGTGGGAACCACTGGTCACTGATTTTTTGATAAGTACCGTCAGCTTTAATTGCTGCCAGCGCGTTATTCAGTTTTTCcag                                                                                                                                                       <  1:429064‑M2/118‑1 (MQ=255)                                                                                                                                                                                                   aaaagaaaaaatttCAATACTTTGTTGTGGCCATGTATGCCTGATAAGCTGAGCGCATCAGGCAATTTTACCTTGTGCATCAGTCTTAAGCCGCGGTTGCTGCTTTCTTAATCTTACTGTGGGAACCACTGGTCACTGATTTTTTGATAAGTACCGTCAGCTTTAATTGCTGCCAGCGCGTTATTCAGTTTTTCCAGCAGGGCTTTGTTATCCGGACGTACAGCGATGCCCAGGCCGGTGCCAAAATATTGCGGATCGGTCACTTTCTCAGTAg                                                                          <  2:565697/262‑1 (MQ=255)                                                                                                                                                                                                    tgtattgaatttgcacgcttttgtaggccggataaggcgtttacgccgcatccggcataaacaacgcgcactttgtcaTCAGTCTCaa                                                                                                                                                                                                                                                                   <  2:257737‑M2/10‑1 (MQ=255)                                                                                                                                                                                                           cAAATTCAATACATTGCATGGGCCATGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTACCTTTGTCATCAGTCTCAAGCCGCGGTTGCgg                                                                                                                                                                                                                                                      >  2:534931/1‑94 (MQ=255)                                                                                                                                                                                                               ttCAATACATTGCATGGGCCATGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTACCTTTGTCATCAGTCTCAATCCGCGGTTGCGGCttt                                                                                                                                                                                                                                                  <  1:534939/94‑1 (MQ=255)                                                                                                                                                                                                                gcacgcttttgtaggccggataaggcgtttacgccgcatccggcataaacaacgcgcactttgtcaTCAGtc                                                                                                                                                                                                                                                                       >  2:355045‑M2/67‑72 (MQ=255)                                                                                                                                                                                                                gcacgcttttgtaggccggataaggcgtttacgccgcatccggcataaacaacgcgcactttgtcaTCAGTCTCAAGCCGCGGTTGCGGCTTTCTGAATCTTACTGTGGGAACCACTGGTCACTGATTTTTTGATAAGTACCGTCAGCTTTAATTGCTGCCAGCGCGTTATTCAGTTTTTCCAGCAGGGCTTTGTTATCCGGACGTAc                                                                                                                               >  2:699477‑M2/67‑208 (MQ=255)                                                                                                                                                                                                                    gcttttgtaggccggataaggcgtttacgccgcatccggcataaacaacgcgcactttgtcaTCAGTCTCaa                                                                                                                                                                                                                                                                   <  1:355051‑M2/10‑1 (MQ=255)                                                                                                                                                                                                                    gcttttgtaggccggataaggcgtttacgccgcatccggcataaacaacgcgcactttgtcaTCAGTCTCAAGCCGCGGTTGCGGCTTTCTGAATCTTACTGTGGGAACCACTGGTCACTGATTTTTTGATAAGTACCGTCAGCTTTAATTGCTGCCAGCGCGTTATTCAGTTTTTCCAGCAGGGCTTTGTTATCCGAACGTACAGCg                                                                                                                           <  1:699486‑M2/146‑1 (MQ=255)                                                                                                                                                                                                                         tGCATGGGCCATGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTACCTTTGTCATCAGTCTCAAGCCGCGGt                                                                                                                                                                                                                                                           >  2:55457/1‑75 (MQ=255)                                                                                                                                                                                                                         tGCATGGGCCATGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTACCTTTGTCATCAGTCTCAAGCCGCGGTTGCGGCTTTCTGAATCTTACTGTGGGAACCACTGGTCACTGATTTTTTGATAAGTACCGTCAGCTTTAATTGCTGCCNGCGCGTTATTCAGTTTTTCCAGCAGGGCTTTGTTATCCGGACGTACAGCGATGCCCCGGCCGGTGCCAAAATATTGCGGATCGGt                                                                                        >  1:618029/1‑238 (MQ=255)                                                                                                                                                                                                                         tGCATGGGCCATGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTACCTTTGTCATCAGTCTCAAGCCGCGGTTGCGGCTTTCTGAATCTTACTGTGGGAACCACTGGTCACTGATTTTTTGATAAGTACCGTCAGCTTTAATTGCTGCCAGCGCGTTATTCAGTTTTTCCAGCAGGGCTTTGTTATCCGGACGTACAGCGCTGCCCAGGCCGGTGCCAAAATATTGCGGATCGGTCACTTTCTCAGTAGCAACACCAAGTTGTGAATTGGtt                                                   >  1:456680/1‑275 (MQ=255)                                                                                                                                                                                                                         tGCATGGGCCATGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTACCTTTGTCATCAGTCTCAAGCCGCGGTTGCGGCTTTCTGAATCTTACTGTGGGAACCACTGGTCACTGATTTTTTGATAAGTACCGTCAGCTTTAATTGCTGCCAGCGCGTTATTCAGTTTTTCCAGCAGGGCTTNGTTATCCGGACGTACAGCGATGCCCAGGCCGGTTCCAAAATCTTCCGGAACGGTCATTTTCTCAGTAGCAACACCaaatatgtctcttaa                                                    >  1:565706/1‑261 (MQ=255)                                                                                                                                                                                                                             tGGGCCATGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTACCTTTGTCATCAGTCTCAAGCCGCGGTTGCg                                                                                                                                                                                                                                                       <  1:55457/75‑1 (MQ=255)                                                                                                                                                                                                                                gCCATGTAGGCCTGATAAGAGTAGCGAATCAGGCAATTTTACCTTTGTCATCAGTCTCAAGCGGCGGGTGAGGCTTTCTGGATCTTACTGTGGGAACCGCTGGTCACTGATTTTTTGATAAGTAACGTCAGCTTTAATTGCTGCCAGCGCGTTATTCAGTTTTTCCAGAAGGGCTTTGTTATCCGGACGTACAGAGATGCCCCGGCCGGTGCGAAAATAATGCGAATAGGGCACTTACTCAGTAGAAACACCAAGTTGTGGATTGGtattaaatc                                            >  2:212696/1‑270 (MQ=255)                                                                                                                                                                                                                                   aTGTAGGCCTGTTAAGCGTAGCGCATCAGGCAATTTTACCTTTGTCATCAGTCTCaa                                                                                                                                                                                                                                                                   >  2:328065/1‑57 (MQ=255)                                                                                                                                                                                                                                     gttggCCTTCTATGCGTATCGCATCAGGCAATTTTACCTTTGTCATCAGTCTCAAGCCTCGGTTGCGGCTTTCTGAATCTTACTGTGGGAACCACTTGTCACTGATTTTTTGATAAGTACCGTCAGCTTTAATTGCTGCCAGCGCGTTATTCAGTTTTTCCAGCAGGGCTTTGTTATCCGGACGTACAGCGATGCCCAGGCCGGTGCCAAAATATTGCGGATCGGTCACTTTCTCAGTAGCAACACCAAGTTGTGGATTGGTTTTCAGCCATTCg                                       <  1:212700/272‑1 (MQ=255)                                                                                                                                                                                                                                     gTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTACCTTTGTCATCAGTCTCAAGCCGCGGTTGCGGCTTTCTGAATCTTACTGTGGGAACCACTGGTCACTGATTTTTTGATAAGTACCGTCAGCTTTAATtgctgc                                                                                                                                                                               >  1:44678/1‑139 (MQ=255)                                                                                                                                                                                                                                       aGGCCTGTTAAGCGTAGCGCATCAGGCAATTTTACCTTTGTCATCAGTCTCAAGCcg                                                                                                                                                                                                                                                               <  1:328071/57‑1 (MQ=255)                                                                                                                                                                                                                                         gCCTGATAAGCGTAGCGCATCAGGCAATTTTACCTTTGTCATCAGTCTCAAGCCGCGGTTGCGGCTTTCTGAATCTTACTGTGGGAACCACTGGTCACTGATTTTTTGATAAGTACCGTCAGCTTTAATTGCTGCCAgc                                                                                                                                                                           <  2:44678/139‑1 (MQ=255)                                                                                                                                                                                                                                          ccTGATAAGCGTAGCGCATCAGGCAATTTTACCTTTGTCATCAGTCTCAAGCCGCGGt                                                                                                                                                                                                                                                           >  1:207586/1‑58 (MQ=255)                                                                                                                                                                                                                                          ccTGATAAGCGTAGCGCATCAGGCAATTTTACCTTTGTCATCAGTCTCAAGCCGCGGTTGCGGCTTTCTGAATCTTACTGTGGGAACCACTGGTCACTGATTTTTTGATAAGTACCGTCAGCTTTAATTGCTGCCAGCGCGTTATTCAGTTTTTCCAGCAGGGCTTTGTTATCCGGACGTACAGCGATGCCCAGTCCGGTGCCAAAATATTGAGGAACGGTCACTTTCGCAGTAGCAACACCAAGGTGCGAATTGGTTTTGAGCCATTCttttt                                   >  2:561663/1‑273 (MQ=255)                                                                                                                                                                                                                                              aTAAGCGTAGCGCATCAGGCAATTTTACCTTTGTCATCAGTCTCAAGCCGCGGTTGCg                                                                                                                                                                                                                                                       <  2:207582/58‑1 (MQ=255)                                                                                                                                                                                                                                              aTAAGCGTAGCGCATCAGGCAATTTTACCTTTGTCATCAGTCTCAAGCCGCGGTTGCGGCTTTCTGAATCTTACtg                                                                                                                                                                                                                                     >  1:203467/1‑76 (MQ=255)                                                                                                                                                                                                                                              aTAAGCGTAGCGCATCAGGCAATTTTACCTTTGTCATCAGTCTCAAGCCGCGGTTGCGGCTTTCTGAATCTTACTGTGGGAACCACTGGTCACTGATTTTTTGATAAGTACCGTCAGCTTTAATTGCTGCCAGCGCGTTATTCAGTTTTTCCAGCAGGGCTTTGTTATCCGGACGTACAGCGATGCCCAGGCCg                                                                                                               >  1:649640/1‑194 (MQ=255)                                                                                                                                                                                                                                              aTAAGCGTAGCGCATCAGGCAATTTTACCTTTGTCATCAGTCTCAAGCCGCGGTTGCGGCTTTCTGAATCTTACTGTGGGAACCACTGGTCACTGATTTTTTGATAAGTACCGTCAGCTTTAATTGCTGCCAGCGCGTTATTCAGTTTTTCAAGCAGGGCTTTGTTATCCGGACGTACAGCGATGCCCAGTCCGGTGCCAAATTATTGCGGATCGGTCACTTTCTCATTACCAACACCAAGTTGTGGATTGGATTTCAGCCATTCGTTTacaacc                              >  1:110074/1‑275 (MQ=255)                                                                                                                                                                                                                                              aTAAGCGTAGCGCATCAGGCAATTTTACCTTTGTCATCAGTCTCAAGCCGCGGTTGCGGCTTTCTGAATCTTACTGTGGGAACCACTGGTCACTGATTTTTTGATAAGTACCGTCAGCTTTAATTGCTGCCAGCGCGTTATTCAGGTTTTCCNGCAGGGCTTTGTTATCCGGACGTACAGCGATGCCCAGGCCGGTGCCAAACTATTGCGGATCGGTCCCTTTCTCAGTAGCAACACCAAGTTGTGGATTGGTTTTCAGCCATTCGTTTacc                                 >  1:614304/1‑272 (MQ=255)                                                                                                                                                                                                                                                  gtgTAGCGTTTCAGGTAATTTTACCTTTGTCATCAGTCTCAAGCCGCTGTTGCGGCTTTCTGAATCTTACTGTGGGAACCACTGGTCACTGNTTTTTTGATAAGTACCGTCAGCTTTAATTGCTGCCAGCGCGTTATTCAGTTTTTCCAGCAGGGCTTTGTTATCCGGACGTACAGCGATGCCCAGGCCGGTGCCAAAATATTGCGGATCGGTCACTTTCTCAGTAGCAACACCAAGTTGTGGATTGGTTTTCAGCCATTCGTTTACCACCGCtg                          <  1:561672/273‑1 (MQ=255)                                                                                                                                                                                                                                                  gCGTAGCGCATCAGGCAATTTTACCTTTGTCATCAGTCTCAAGCCGCGGTTGCGGCTTTCTGAATCTTACTGTggg                                                                                                                                                                                                                                 <  2:203463/76‑1 (MQ=255)                                                                                                                                                                                                                                                  gCGTAGCGCATCAGGCAATTTTACCTTTGTCATCAGTCTCAAGCCGCGGTTGCGGCTTTCTGAATCTTACTGTGGGAACCACTGGTCACTGATTTTTTGATAAGTACCGTCAGCTTTAATTGCTGCCAGCGCGTTATTCAGTTTTTCCAGCAGGGCTTTGTTATCCGGACGTACAGCGATGCCCAGGCCGGTGc                                                                                                           <  2:649631/194‑1 (MQ=255)                                                                                                                                                                                                                                                                          ttttgttaACAGTATAAAGACTCGGTNGCGGCTTTCTGAATCTTCCTGTGGGAACCACTGGTCACTGATTTTTTGATAAGTACCGTCAGCTTTAATTGCTGCCAGCGCGTTATTCAGTTTTTCCAGCAGGGCTTTGTTATCCGGACGTACAGCGATGCCCAGGCCGGTGCCAAAATATTGCGGATCGGTCACTTTCTCAGTAGCAACACCAAGTTGTGGATTGGTTTTCAGCCATTCGTTTACCACCGCTGTGTCACCAAATACCCCATCAATAc  <  2:468622‑M2/267‑1 (MQ=255)                                                                                                                                                                                                                                                                          ctttgtcaTCAGTCTCAAGCCGCGGTTGCGGCTTTCTGAATCTTACTGTGGGAACCACTGGTCACTGATTTTTTGATAAGTACCGTCAGCTTTAATTGCTGCCAGCGCGTTATTCAGTTTTTCCAGCAGGGCTTTGTTATCCGGACGTACAGCGATGCCCAGGCCGGTGCCAAAATATTGCGGATCGGTCACTTTCTCAGTAGCAACACCAAGTTGTGGATTGGTTTTCAGCCATTCGt                                      >  1:278907‑M2/9‑239 (MQ=255)                                                                                                                                                                                                                                                                              gtcaTCAGTCTCAAGCCGCGGTTGCGGCTTTCTGAATCTTACTGTGGGAACCACTGGTCACTGATTTTTTGATAAGTACCGTCAGCTTTAATTGCTGCCAGCGCGTTATTCAGTTTTTCCAGCAGGGCTTTGTTATCCGGACGTACAGCGATGCCCAGGCCGGTGCCAAAATATTGCGGATCGGTCACTTTCTCAGTAGCAACACCAAGTTGTGGATTGGTTTTCAGCCATTCGTTTac                                  <  2:278902‑M2/235‑1 (MQ=255)                                                                                                                                                                                                                                                                                 aTCAGTCTCAAGCCGCGGTTGCGGCTTTCTGAATCTTACTGTGGGAACCACTGGTCACTGATTTTTTg                                                                                                                                                                                                          >  1:119087‑M2/2‑68 (MQ=255)                                                                                                                                                                                                                                                                                  |                                                                                                                                                                                                                                                                           GAAAGATATCCGCGAACTGCCTGGGTTTCGTATTGAACGGGTGCAGCTTTTCGATATGTTCCCGCATACCGCGCACTATGAAGTGCTGACGCTGCTGGTGAAGCAATAAAAAAGCCGCATGTGCGGCTTCAGATTGCTGACAAAGTGCGCGTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAGCGTGCAAATTCAATACATTGCATGGGCCATGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTACCTTTGTCATCAGTCTCAAGCCGCGGTTGCGGCTTTCTGAATCTTACTGTGGGAACCACTGGTCACTGATTTTTTGATAAGTACCGTCAGCTTTAATTGCTGCCAGCGCGTTATTCAGTTTTTCCAGCAGGGCTTTGTTATCCGGACGTACAGCGATGCCCAGGCCGGTGCCAAAATATTGCGGATCGGTCACTTTCTCAGTAGCAACACCAAGTTGTGGATTGGTTTTCAGCCATTCGTTTACCACCGCTGTGTCACCAAATACCCCATCAATAC  >  CP009273/894993‑895532

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.