New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP009273	= 1120722	23 (0.600)	9 (0.250)	8/294	NT	26.7%	coding (61/1209 nt)	mdtH	multidrug resistance efflux transporter conferring overexpression resistance to norfloxacin and enoxacin
	?	CP009273	= 1121068	28 (0.780)					coding (51/585 nt)	rimJ	ribosomal‑protein‑S5‑alanine N‑acetyltransferase

AGGCATGAAAACCACAATAGCCACGGTTCGTGGGCGATACCCATTGTGGCGAATCCGGCGGCGCGCATCAGCATACCGGTAACAATCATCGGTTTGGCACCAAAGCGGTCGGCAATTGCACCGCCGAAAATACCCAGACCTTGCTGAATAAATTGGCGTAGACCGAGAGCAATACCGACCATGACGGCGGCCCAGCCCATTTGATCAACGAAGCGGATAGAGATCAGCGGGAAGACAACAAAGAACCCCAGCACGACCAGCATATTATCGATGAGCAGGAAATATTTACCCAGGTTCCTCGCCTGCGACACGCGGGACATTTCCCCTCCCGGGAAATAAAAGATGAGCACTTTCTATTCTGCATTGCCGCTAAGACTTTTCCCATCACTTCGGGGACAATATTTTTTTATCAAAACGTCGCTTTGATAGAGAGTTTTTATCAAATATGTGAATAATGCAGAAAATGGCATTTTGGACTTTTCACAGGGTCTGGTTGCGCAGGTATAGTAATACTTACA  >  CP009273/1120463‑1120980                                                                                                                                                                                                                                                                    |                                                                                                                                                                                                                                                                   cggCATGAAAACCACAATAGCCGCGGTTCGTGGGCGATACCCATTGTGGCGAATCCGGCGGCGCGCATCAGCATACCGGTAACAATCATCGGTTTGGCACCAAAGCGGTCGGCAATTGCACCGCCGAAAATACCCAGACCTTGCTGAATAAATTGGCGTAGACCGAGAGCAATACCGACCATGACGGCGGCCCAGCCCATTTGATCAACGAAGCGGATAGAGATCAGCGGGAAGACAACAAAGAACCCCAGCACGACCAGCATATTATCGATGAg                                                                                                                                                                                                                                                     <  1:126410/274‑1 (MQ=255)   gCATGAAAACCACAATAGCCACGGTTCGTGGGCGATACCCATTGTGGCGAATCCGGCGGCGCGCATCAGCATACCGGTAACAATCATCGGTTTGGCACCAAAGCGGTCGGCAATTGCACCGCCGAAAATACCCAGACCTTGCTGAATAAATTGGCGTAGACCGAGAGCAATACCGACCATGACGGCGGCCCAGCCCATTTGATCAACGAAGCGGATAGAGATCAGCGGGAAGACAACAAAAAACCCCAGAACGACCAGCAAAATATCGAAGAGCa                                                                                                                                                                                                                                                   >  1:328275/1‑275 (MQ=255)      tGAAAACCACAATAGCCACGGTTCGTGGGCGATACCCATTGTGGCGAATCCGGCGGCGCGCATCAGCATACCGGTAACAGTCATCGGTTTGGCACCAAAGCGGTCGGCAATTGCACCGCCGAAAATACCCAGACCTTGCTGAATAAATTGGCGTAGACCGAGAGCAATACCGACCATGACGGCGGCCCAGCCCATTTGATCAACGAAGCGGATAGAGATCAGCGGGAAGACAACAAAGAACCCCAGCACGACCAGtcggtctgtagttaagcgca                                                                                                                                                                                                                                                <  1:714372‑M1/275‑21 (MQ=255)                                 ggCGATACCCATTGTGGCGAATCCGGCGGCGCGCATCAGCATAGCGGTAACAATCATCGGTTTGGCACCAAAGCGGTCGGCAATTGCACCGCCGAAAATACCCAGACCTTGCTGAATAAATTGGCGTAAACCGAGAGCAATACCGACCATGACGGCGGCCCAGCCCATTTGATCAACGAAGCGGATAGAGATCAGCGGGAAGACAACAAAGAACCCCAGCACGACCAGCATATTATCGa                                                                                                                                                                                                                                                         <  1:710950/239‑1 (MQ=255)                                   cGATACCCATTGTGGCGAATCCGGCGGCGCGCATCAGCATACCGGTAACAATCATCGGTTTGGCACCAAAGCGGTCGGCAATTGCACCGCCGAAAATACCCAGACCTTGCTGAATAAATTGGCGTAGACCGAGAGCAATACCGACCATGACGGCGGCCCAGCCCATTTGATCAACGAAGCGGATAGAGATCAGCGGGAAGACAACAAAGCACCCCAGCACGACCAGtcggtctgtggttaagcgcacttttggcacgttactgcgatagcacaa                                                                                                                                                                                                                    >  1:218155‑M1/1‑226 (MQ=255)                                                                             cGGTAACAATCATCGGTTTGGCACCAAAGCGGTCGGCAATTGCACCGCCGAAAATACCCAGACCTTGCTGAATAAATTGGCGTAGACCGAGAGCAATACCGACCATGACGGCGGCCCAGCCCATTTGATCAACGAAGCGGATAGAGATCAGCGGGAAGACAACAAAGAACCCCAGCACGACCAGCATATTATCGATGAGCAGGAAATATTTACCCAGGTTCCTCGCCTGCGACACGCGGGACATTTCCCCTCCCGGGAAAt                                                                                                                                                                                       <  2:606086/261‑1 (MQ=255)                                                                             cGGTAACAATCATCGGTTTGGCACCAAAGCGGTCGGCAATTGCACCGCCGAAAATACCCAGACCTTGCTGAATAAATTGGCGTAGACCGAGAGCAATACCGACCATGACGGCGGCCCAGCCCATTTGATCAACGAAGCGGATAGAGATCAGCGGGAAGACAACAAAGAACCCCAGCACGACCAGCATATTATCGATGAGCAGGAAATATTTACCCAGGTTCCTCGCCTGCGACACGCGGGACATTTCCCCTCCCGGGAAAt                                                                                                                                                                                       >  1:606095/1‑261 (MQ=255)                                                                                        atcGGTTTGGCACCAAAGCGGTCGGCAATTGCACCGCCGAAAATACCCAGACCTTGCTGAATAAATTGGCGTAGACCGAGAGCAATACCGACCATGACGGCGGCCCAGCCCATTTGATCAACGAAGCGGATAGAGATCAGCGGGAAGACAACAAAGAACCCCAGCACGACCAGCATATTATCGATGAGCAGGAAATATTTACCCAGGTTCCTCGCCTGCGACACGCGGGACATTTCCCCTCCCGGGAAATAAAAGATGAGCACTTTCTATTCTg                                                                                                                                                               >  1:420742/1‑274 (MQ=255)                                                                                                       aaGCGGTCGGCAATTGCACCGCCGAAAATACCCAGACCTTGCTGAATAAATTGGCGTAGACCGAGAGCAATACCGACCATGACGGCGGCCCAGCCCATTTGATCAACGAAGCGGATAGAGATCAGCGGGAAGACAACAAAGAACCCCAGCACGAGCAGtcggtctgtggttaagcgaacttttggcacgttactgcgatagccaaacattatctacctactactgcccggaacgtcactaatacgctcnnaacattacgannncagcgagca                                                                                                                                                  >  2:540033‑M1/1‑158 (MQ=255)                                                                                                       aaGCGGTCGGCAATTGCACCGCCGAAAATACCCAGACCTTGCTGAATAAATTGGCGTAGACCGAGAGCAATACCGACCATGACGGCGGCCCAGCCCATTTGATCAACGAAGCGGATAGAGATCAGCGGGAAGACAACAAAGAACCCCAGCACGACCAGCATATTATCGATGAGCAGGAAATATTTa                                                                                                                                                                                                                                        >  1:86730/1‑186 (MQ=255)                                                                                                       aaGCGGTCGGCAATTGCACCGCCGAAAATACCCAGACCTTGCTGAATAAATTGGCGTAGACCGAGAGCAATACCGACCATGACGGCGGCCCAGCCCATTTGATCAACGAAGCGGATAGAGATCAGCGGGAAGACAACAAAGAACCCCAGCACGACCAGCATATTATCGATGAGCAGGAAATATTTACCCAGGTTCCTCGCCTGCGACACGCGGGACATTTCCCCTCCCGGGAAATAAAAGATGAGCACTTTCTATTCTGCATTGCCGCTAAGACt                                                                                                                                               <  1:416855/275‑1 (MQ=255)                                                                                                           gggcGGCAATTGCACCGCCGAAAATACCCAGACCTTGCTGAATAAATTGGCGTAGACCGAGAGCAATACCGACCATGACGGCGGCCCAGCCCATTTGATCAACGAAGCGGATAGAGATCAGCGGGAAGACAACAAAGAACCCCAGCACGACCAGCATATTATCGATGAGCAGGAAATATTTACCCa                                                                                                                                                                                                                                    <  2:86729/183‑1 (MQ=255)                                                                                                                         ccgccgAAAATACCCAGTCCGTGCTGAATAAATTGGCGTAGACCGAGAGCAATACCGACCATGACGGCGGCCCAGCCCAATTGATCAACGAAGCGGATAGAGATCAGCGGGAAGACAACAAAGAACCCCAGCACGACCAGCATATTATCGAGGAGCAGGAAATATTTACCCAGGTTCCTCGCCTGCGACACGCGGGACATTTCCCCTCCCGGGAAATAAAAGATGAGCACTTTCTATTCTGCATTGCCGCTAAGACTTTTCCCATCACTTCggg                                                                                                                              <  1:154324/274‑1 (MQ=255)                                                                                                                          cgccgAAAATACCCTGCCCTTGCTTAATAAATTGGCGTAGAACGAGAGCAATACCGACCATGACGGCGGCCCAGCCCATTTGATCAACGAAGCGGATAGAGATCAGCGGGAAGACAACAAAGAACCCCAGCACGACCAGtcggtctgtggttaagcgcacttttggcacgttactgcgatagccaaacattctatacctactccttcccgtaacgtctttaatacgctgtaagtattactatacctgcgcaaccagaccctgtgaaaagtccaaa                                                                                                                            <  1:299668‑M1/275‑137 (MQ=255)                                                                                                                           gccgAAAATACCCAGACCTTGCTGAATAAATTGGCTTAGACCGAGAGCAATACCGACCATGACGGCGGCCCAGCCCATTTGATCAACGAANCGGATAGAGATCAGCGGGATGACAACAAAGAACCCCAGCACGACCAGtcgttctgtggttaagcgcacttttggcacgttactgcgatagccaaacattctatacctactccttcccgtaacgtctttaatacgctgtaagtattactatacctgcgcaaccagaccctgtgaaaagtccaaa                                                                                                                            <  1:540041‑M1/274‑137 (MQ=255)                                                                                                                           gccgAAAATACCCAGACCTTGCTGAATAAATTGGCGTAGACCGAGAGCAATACCGACCATGACGGCGGCCCAGCCCATTTGATCAACGAAGCGGATAGAGATCAGCGGGAAGACAACAAAGAACCCCAGCACGACCAGtcggtctgtggttaagcgcacttttggcacgttactgcgatagccaaacattctatacctactccttcccgtaacgtctttaatacgctgtaagtattactatacctgcgcaacccgaccctaacaaaattccaa                                                                                                                             >  2:579757‑M1/1‑138 (MQ=255)                                                                                                                                           caatgctGAATAAATGAGCGTACACCGAGAGCAATACCGACCATGACGGCGGCCCAGCCCATTTGATCAACGAAGCGGATAGAGAGCAGCGGGAAGACAACAAAGAACCCCAGCACGACCAGtcggtctgtggttaagcgcacttttggcacgttactgctatagccaaacattctatacctactccttcccgtaacctctttaagacgctgtaagtattactatacctgcgcaaccagaccctgtgaaaagtccaaaatgccattttctgcatt                                                                                                           <  2:218150‑M1/272‑154 (MQ=255)                                                                                                                                              tGCTGAATAAATTGGCGTAGACCGAGAGCAATACCGACCATGACGGCGGCCCAGCCCATTTGATCAACGAAGCGGATAGAGATCAGCGGGAAGACAACAAAGAACCCCAGCACGACCAGCATATTATCGATGAGCAGGa                                                                                                                                                                                                                                                >  2:342187/1‑139 (MQ=255)                                                                                                                                               gCTGAATAAATTGGCGTAGACCGAGAGCAATACCGACCATGACGGCGGCCCAGCCCATTTGATCAACGAAGCGGATAGAGATCAGCGGGAAGACAACAAAGAACCCCAGCACGACCAGCATATTATCGATGAGCAGGAAATATTTACCCAGGTTCCTCGCCTGCGACACGCGGGACATTTCCCCTCCCGGGAAATAAAAGATGAGCACTTTCTATTCTGCATTGCCGCTAAGACTTTTCCCATCACTTCGGGGACAATATTTTTTTATCAAAACg                                                                                                       >  2:656069/1‑275 (MQ=255)                                                                                                                                                  gAATAAATTGGCGTAGACCGAGAGCAATACCGACCATGACGGCGGCCCAGCCCATTTGATCAACGAAGCGGATAGAGATCAGCGGGAAGACAACAAAGAACCCCAGCACGACCAGCATATTATCGATGAGCAGGAAata                                                                                                                                                                                                                                            <  1:342193/139‑1 (MQ=255)                                                                                                                                                    aTAAATTGGCGTAGACCGAGAGCAATACCGACCATGACGGCGGCCCAGCCCATTTGATCAACGAAGCGGATAGAGATCAGCGGGAAGACAACAAAGAACCCCAGCACGACCAGtcggtctgtggttaagcgcacttttggcacgttactgcgatagccaaacattctatacctactccttcccgtaacgtctttaatacgctgtaagtattactatacctgcgcaaacagaccctgtgcaaagtcaaaaatgccattttatgccttattcaca                                                                                                    >  2:723594‑M1/1‑113 (MQ=255)                                                                                                                                                         ttGGCGTAGACCGAGAGCAATACCGACCATGACGGCGGCCCAGCCCATTTGATCAACGAAGCGGATAGAGATCAGCGGGAAGACAACAAAGAACCCCAGCACGACCAGCATATTATCGATGAGCAGGTAATATTTACCCAGGTTCCTCGCCTGCGACACGCGGGACATTTCCCCTCCCGGGAAATAAAAGATGAGCACTTTCTATTCTGCATTGCCGCTAAGACTTTTCCCATCACTTCGGGGACAATATTTTTTTATCAAAACGTCGCTTTGa                                                                                              <  1:656078/274‑1 (MQ=255)                                                                                                                                                             cGTAGACCGAGAGCAATACCGACCATGACGGCGGCCCAGCCCATTTGATCAACGAAGCGGATAGAGATCAGCGGGAAGACAACAAAGAACCCCAGCACGACCAGc                                                                                                                                                                                                                                                                   >  2:628218/1‑105 (MQ=255)                                                                                                                                                             cGTAGACCGAGAGCAATACCGACCATGACGGCGACCCAGCCAATTTGATCAACGAAGCGGATAGAGATCAGCGGGAAGACAACAAAGAACCCCAGCACGACCAGtcggtctgtggttaagcgcacttttggcacgttactgcgatagccacacattctatacctactccttcccgtagagtctttaatacgctgtaagtattactatacatgcgcaaccagaccctgtgaaaagtccaaaatgcacttttctgcattattcccatatttgataaa                                                                                         >  1:375802‑M1/1‑104 (MQ=255)                                                                                                                                                                 gACCGAGAGCAATACCGACCATGACGGCGGCCCAGCCCATTTGATCAACGAAGCGGATAGAGATCAGCGGGAAGACAACAAAGAACCCCAGCACGACCAGCatat                                                                                                                                                                                                                                                               <  1:628227/105‑1 (MQ=255)                                                                                                                                                                                  aacATGAAGGAGGACCAACCCATTTGATCAACCAAGAGGATAGAGATCCGCGGGAAGACAACAAAGAAACCCAGCACGACCAGCATATTATCGATGAGCAGGAAATATTTACCCAGGTTCCTAGCCTGCGACACGCGGGACATTTCCCCTCCCGGGAAATAAAAGATGAGCACTTTCTGTTCTGCATTGCCGCTAAGACTTTTCCCATCACTTCGGGGACAATATTTTTTGTTAAAAACGTCGCTTTGATAGAGAGTGTTTATAAAATATGTGaa                                                                    <  2:328269/273‑1 (MQ=255)                                                                                                                                                                                  aCCATGACGGCGGCCCAGCCCATTTGATCAACGAAGCGGATAGAGATCAGCGGGAAGACAACAAAGAACCCCAGCACGACCAGCATATTATCGATGAGCAGGAAATATTTACCCAGGTTCCTCGCCTGCGACACGCGGGACATTTCCCCTCCCGGGAAATAAAAGATGAGCACTTTCTATTCTGCATTGCCGCTAAGACTTTTCCCATCACTTCGGGGACAATATTTTTTTATCAAAACGTCGCTTTGATAGAGAGTTTTTATAAAATAATTGaa                                                                    >  1:90640/1‑275 (MQ=255)                                                                                                                                                                                      tGACGGCGGCCCAGCCCATTTGATCAACGAAGCGGATAGAGATCAGCGGGAAGACAACAAAGAACCCCAGCACGACCAGCa                                                                                                                                                                                                                                                                  <  2:136899/81‑1 (MQ=255)                                                                                                                                                                                                        tttGATCAACGAAGCGGATAGAGATCAGCGGGAAGACAACAAAGAACCCCAGCACGACCAGCATATTATCGATGAGCAGGAAATATTTACCCAGGTTCCTCGCCTGCGACACGCGGGACATTTCCCCTCCCGGGAAATAAAAGATGAGCa                                                                                                                                                                           >  1:241919/1‑150 (MQ=255)                                                                                                                                                                                                            aTCAACGAAGCGGATAGAGATCAGCGGGAAGACAACAAAGAACCCCAGCACGACCAGCATATTATCGATGAGCAGGAAATATTTACCCAGGTTCCTCGCCTGCGACACGCGGGACATTTCCCCTCCCGGGAAATAAAAGATGAGCACttt                                                                                                                                                                       <  2:241914/150‑1 (MQ=255)                                                                                                                                                                                                                               aTCAGCGGGAAGACAACAAAGAACCCCAGCACGACCAGCATATTATCGATGAGCAGGAAATATTTACCCAGGTTCCTCGCCTGCGACACGCGGGACATTTCCCCTCCCGGGAAATAAAAGATGAGCACTTTCTATTCTGCATTGCCGCTaa                                                                                                                                                   >  2:674535/1‑151 (MQ=255)                                                                                                                                                                                                                                   gCGGGAAGACAACAAAGAACCCCAGCACGACCAGCATATTATCGATGAGCAGGAAATATTTACCCAGGTTCCTCGCCTGCGACACGCGGGACATTTCCCCTCCCGGGAAATAAAAGATGAGCACTTTCTATTCTGCATTGCCGCTAAGACt                                                                                                                                               <  1:674544/151‑1 (MQ=255)                                                                                                                                                                                                                                     gggAAGACAACAAAGAACCCCAGCACGACCAGCATATTATCGATGAGCAGGAAATATTTACCCAGGTTCCTCGCCTGCGACNCGCGGGACNTTTCCCCTCCCGCGAAATAAAAGATGAGCACTTTCTATTCTGCATTGCCGCTAAGACTTTTCCCATCACTTCGGGGACAATATTTTTTTATCAAAACGTCGCTTTGATAGAGAGTTTTTATCAAATATGTGAATAATGCAGAAAATGGCATTTTGGCCTTTTCACAGGGTCTGGTTGCGCAgg                  <  1:465487/274‑1 (MQ=255)                                                                                                                                                                                                                                         aGACAACAAAGAACCCCAGCACGACCAGCATATTATCG‑‑GAGCAGGAAATATTTACCCAGGTTCCTCGCCTGCGACACGCGGGACATTTCCCCTCCCGGGAAATAAAAGATGAGCACTTTCTATTCTGCATTGCCGCTAAGACTTTTCCCATCACTGCGGGGACAATATTTTTTTATCAAAACGTCGCTTTGATAGAGAGTTTTTATCAAATATGTGAATAATGCAGAAAATGGCATTTTGGACTTTTCACATGGTCTGGTTGCGCCTGtatgg             >  2:679311/1‑271 (MQ=255)                                                                                                                                                                                                                                                   gAACCCCAGCACGACCAGCATATTATCG‑‑GAGCAGGAAATATTTACCCAGGTTCCTCGCCTGCGACACGCGGGACATTTTCCCTCCCGGGAAATAAAAGATGAGCACTTTCTATTCTGCATTGCCGCTAAGACTTTTCCCATCACTTCGGGGACAATATTTTTTTATCAAAACGTCGCTTTGATAGAGAGTTTTTATCAAATATGTGAATAATGCAGAAAATGGCATTTTGGACTTTTCACAGGGTCTGGTTGCGCAGGTATAGTAATACTTACa  <  1:679320/274‑1 (MQ=255)                                                                                                                                                                                                                                                            cACGACCAGtcggtctgtggttaagcgcacttttggcacgttactgcgatagccaaacattctatacctactccttcccgtaacgtctttaatacgctgtaagtattactatacctgcgcaaccagaccctgtgaaaagtccaaaatgccattttctgca                                                                                                             <  1:358454‑M1/160‑152 (MQ=255)                                                                                                                                                                                                                                                            cACGACCAGtcggtctgtggttaagcgcacttttggcacgttactgcgatagccaaacattctatacctactccttcccgtaacgtctttaatacgctgtaagtattactatacctg                                                                                                                                                        <  1:561867‑M1/117‑109 (MQ=255)                                                                                                                                                                                                                                                            cACGACCAGtcggtctgtggttaagcgcacttttggcacgttactgcgatagccaaacattctatacctactccttcccgtaacgtctttaatacgctgtaagt                                                                                                                                                                     <  2:145219‑M1/104‑96 (MQ=255)                                                                                                                                                                                                                                                            cACGACCAGtcggtctgtggttaagcgcacttttggcacgttactgcgatagccaaacattctatacctactccttcccgtaacgtctttaata                                                                                                                                                                               <  2:677583‑M1/94‑86 (MQ=255)                                                                                                                                                                                                                                                            cACGACCAGtcggtctgtggttaagcgcacttttggcacgttactgcgatagccaaacattctatacctactccttcccgtaac                                                                                                                                                                                         <  1:248073‑M1/84‑76 (MQ=255)                                                                                                                                                                                                                                                              cGACCAGtcggtctgtggttaagcgcacttttggcacgttactgcgatagccaaacattctatacctactccttcccgtaacgtctttaatacgctgtaagtattactatacctgcgcaaccagaccctgtgaaaagtccaaaatgccattttctg                                                                                                               >  1:191277‑M1/1‑7 (MQ=255)                                                                                                                                                                                                                                                                aCCAGtcggtctgtggttaagcgcacttttggcacgttactgcgatagccaaacattctatacctactccttcccgtaacgtctttaatacgctgtaagt                                                                                                                                                                     >  2:611639‑M1/1‑5 (MQ=255)                                                                                                                                                                                                                                                                  cAGtcggtctgtggttaagcgcacttttggcacgttactgcgatagccaaacattctatacctactccttcccgtaacgtctttaatacgctgtaagtattactatacctgcgcaaccagaccctgtgaaaagtccaaaatgccattttctgcatt                                                                                                           <  2:191274‑M1/156‑154 (MQ=255)                                                                                                                                                                                                                                                                  cAGtcggtctgtggttaagcgcacttttggcacgttactgcgatagc                                                                                                                                                                                                                        >  1:121455‑M1/1‑3 (MQ=255)                                                                                                                                                                                                                                                                    gtcggtctgtggttaagcgcacttttggcacgttactgcgatagccaaacattctatacctactccttcccgtaacgtctttaatacgctgtaagtatta                                                                                                                                                                 <  1:611648‑M1/100‑100 (MQ=255)                                                                                                                                                                                                                                                                    |                                                                                                                                                                                                                                                                   AGGCATGAAAACCACAATAGCCACGGTTCGTGGGCGATACCCATTGTGGCGAATCCGGCGGCGCGCATCAGCATACCGGTAACAATCATCGGTTTGGCACCAAAGCGGTCGGCAATTGCACCGCCGAAAATACCCAGACCTTGCTGAATAAATTGGCGTAGACCGAGAGCAATACCGACCATGACGGCGGCCCAGCCCATTTGATCAACGAAGCGGATAGAGATCAGCGGGAAGACAACAAAGAACCCCAGCACGACCAGCATATTATCGATGAGCAGGAAATATTTACCCAGGTTCCTCGCCTGCGACACGCGGGACATTTCCCCTCCCGGGAAATAAAAGATGAGCACTTTCTATTCTGCATTGCCGCTAAGACTTTTCCCATCACTTCGGGGACAATATTTTTTTATCAAAACGTCGCTTTGATAGAGAGTTTTTATCAAATATGTGAATAATGCAGAAAATGGCATTTTGGACTTTTCACAGGGTCTGGTTGCGCAGGTATAGTAATACTTACA  >  CP009273/1120463‑1120980

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.