New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP009273	= 1203054	32 (0.830)	7 (0.190)	6/304	NT	14.1%	coding (98/630 nt)	stfP	e14 prophage; uncharacterized protein
	?	CP009273	1204898 =	54 (1.450)					pseudogene (178/501 nt)	stfE	pseudogene, e14 prophage; side tail fiber protein fragment family;Phage or Prophage Related

ACATGCCAGCCACCACCAACTCCACCTGGATGACATGTGGCGATCCCTGTGATTCCGCACTGCGTATCTGGGGTGACACCGTTGTCGAGTGTGTGCTTAACAAACTCTGCCCGTCGCATACCTACGTAATTTTTAAATATCCGGAGTAATCCATGCATCGTATAGACACGAAAACCGCGCAGAAGGATAAGTTCGGCGCGGGTAAGAACGGTTTTACCCGTGGTAACCCCCAGACCGGCACGCCTGCCACCGATCTGGATGATGACTACTTTGACATGTTGCAGGAGGAACTTTGCAGCGTGGTGGAGGCATCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATA  >  CP009273/1202805‑1203316                                                                                                                                                                                                                                                          |                                                                                                                                                                                                                                                                       aCATGCCAGCCACCACCAACTCCACCTGGATGACATGTGGCGATCCCTGTGATTCCGCACTGCGTATCTGGGGTGACACCGTTGTCGAGTGTGTGCTTAACAAACTCTGCCCGTCGCATACCTACGTAATTTTTAAATATCCGGAGTAATCCATGCATCGTATAGACACGAAAACCGCGCAGAAGGATAAGTTCGGCGCGGGTAAGAACGGTTTTACCCGTGGTAACCCCCAGACCGGCACGCCTGCCACCGATCTGGATGATAACTACTTTGAc                                                                                                                                                                                                                                               >  1:340242/1‑275 (MQ=255)                         cctgggacgcATGTGGCGATGCGTGTGAGTACGCACTGCATATCTGGGGTGACACCGTTGTCGAGTGAGGGCTGTACAAACTCGGCCCGTCGCATACCTAAGTAATTTTGAAATATCCGGAGTAAGCCATGCAGCGTATAGACACGAAAACCGCGCAGAAGGATAAGTTCGGCGCGGGTAAGAACGGTTTTAACCGTGGTAACCCCCAGACCGGCACGCCTGCCACCGATCGGGATGATGACTACTTTGACATGTTGCAGGAGGAACTTTGCAGc                                                                                                                                                                                                                       <  2:80132/266‑1 (MQ=37)                                                     ttCCGCACTGCGTATCTGGGGCGACACCTGTGTCGAGTGTGTGCTTAACAAACTCTGCCCGTCGCATACCTACGTAATTTTTAAATATCCGGAGTAATCCATGCATCGTATAGACACGAAAACCGCGCAGAAGGATAAGTTCGGCGCGGGTAAGAACGGTTTTACCCGTGGTAACCCCCAGACNGGCACGCCTGCCACCGATCTGGATGATGACTACTTTGACATGTTGCAGGAGGAACTTTGCAGCGTGGTGGAGGCATCCGGTGCCAGCCTgg                                                                                                                                                                                           >  1:508941/1‑275 (MQ=255)                                                        cGCACTGCGTATCTGGGGTGACACCGTTGTCGAGTGTGTGCTTAACAAACTCTGCCCGTCGCATACCTACGTAATTTTTAAATATCCGGAGTAATCCATGCATCGTATAGACACGAAAACCGCGCAGAAGGATAAGTTCGGCGCGGGTAAGAACGGTTTTACCCGTGGTAACCCCCAGACCGGCACGCCTGCCAcc                                                                                                                                                                                                                                                                       >  2:660965/1‑196 (MQ=255)                                                            cTGCGTATCTGGGGTGACACCGTTGTCGAGTGTGTGCTTAACAAACTCTGCCCGTCGCATACCTACGTAATTTTTAAATATCCGGAGTAATCCATGCATCGTATAGACACGAAAACCGCGCAGAAGGATAAGTTCGGCGCGGGTAAGAACGGTTTTACCCGTGGTAACCCCCAGACCGGCACGCCTGCCACCGATc                                                                                                                                                                                                                                                                   <  1:660974/196‑1 (MQ=255)                                                               cGTATCTGGGGTGACACCGTTGTCGAGTGTGTGCTTAACAAACTCTGCCCGTCGCATACCTAAGTAATTTTTAAATATCAGGAGTAATCCATGCATCGTATAGAACCGAATACCGCGAAGAAGGATCAGTTCGGCGCGGGTAAGAACGGTTTTACCCGTGGTAACCCCCCGCCCGGCACGCCTGCCACCGATCAGGACGATGCCTCCATTGCAATGTTGCAGAACGACCTTTGCAGCGAGGTGGGGGCATCCGGTGACCGCCCGGCGCAggcc                                                                                                                                                                                   >  2:221640/1‑271 (MQ=255)                                                               cGTATCTGGGGTGACACCGTTGTCGAGTGTGTGCTTAACAAACTCTGCCAGTCGCATACCTACGTAATTTTTACATATACGGAGTAATCCATGCATCGTATAGAAACCAAAACCGCGCAGAAGGATAAGTTCGGCGCGGGTAAGAACGGTTTTACCCGTGGTAACCCCCAGACCGGCACGCCTGCCACCGATCTGGATGATGACTACTTTTCACTGTTGCAGAAGGAACCTTGCAGCGTGGTTGAGGCATCCGGTGCCAGACTgcggatgattcg                                                                                                                                                                                 >  2:610816/1‑264 (MQ=37)                                                                   tCTGGGGTGACAACGTTGTCGAGTGTGTGCTTAACAAACTCTGCCCGTCTCATACCTACGTAATTTTTAAATATCCGGAGTANTCCATGCANCGTATAGACACGTAAACCGCGCAGAAGGATAAGTTCGGCGCGGGTAAGAACGGTTTTACCCGTGGTAACCCCCAGACCGGCACGCCTGCCACgaataaactcaccacgtaaatcaggcaatttatttgtcggataagcctttgccagttccgggtattcttcagcagaaaaagcggcaccatt                                                                                                                                                                             <  1:478562‑M1/275‑92 (MQ=255)                                                                    cTGGGGTGACACCGTTGTCGAGTGTGTGCTTAACAAACTCTGCCCGTCGCATACCTACGTAATTTTTAAATATCCGGAGTAATCCATGCATCGTATAGACACGAAAACCGCGCAGAAGGATAAGTTCGGCGCGGGTAAGAACGGTTTTACCCGTGGTAACCCCCAGACCGGCACGCCTGCCACgaataaactcaccacgtaaatcaggcaatttatttgtcggataagcctttgccag                                                                                                                                                                                                                 >  1:206259‑M1/1‑183 (MQ=255)                                                                        ggTGACACCGTTGTCGAGTGTGTGCGTAACAAACTCTGCCCGTCGCATACCTACGTAATTTTTAAATATCCGGAGTAATCCATGCATCGTATAGACACGAAAACCGCGCAGAAGGATAAGTTCGGCGCGGGTAAGAACGGTTTTACCCGTGGTAACCCCCAGACCGGCACGCCTGCCACgaataaactcaccacgtaaatcaggcaatttatttgtcggataagcctttgccagttcc                                                                                                                                                                                                             <  2:206255‑M1/238‑60 (MQ=255)                                                                         gTGACACCGTTGTCGAGTGTGTGCTTAACAAACTCTGCCCGTCGCATACCTACGTAATTTTTAAATATCCGGAGTAATCCATGCATCGTATAGACACGAAAACCGCGCAGAAGGATAAGTTCGGCGCGGGTAAGAACGGTTTTACCCGTGGTAACCCCCAGACCGGCACGCCTGCCACCGATCTGGATGATGACTACTTTGACATGTTGCAGGAGGAACTTTGCAGCGTGGTGGAGGCATCCGGTGCCAGCCTGGAGAAGGGGCGGAACGACCa                                                                                                                                                                        >  1:162132/1‑274 (MQ=255)                                                                              acCGTTGTCGAGTGTGTGCTTAACAAACTCTGCCCGTCGCATACCTACGTAATTTTTAAATATCCGGAGTAATCCATGCATCGTATACACACGAAAACCGCGCAGAAGGATAAGTTCGGCGCGGGTAAGAACGGTTTTACCCGTGGTCACCCCCAGACCGGCACGCCTGCCACCGATCTTGCTGATCACTCCTCGGACATGTTGCAGGAGGAACTTTGCAGCGCGGTCGAGGCAACCGGAGCAAGCGAGGCGAAGGGGCGTCACGAGCAGttcgt                                                                                                                                                                  >  2:603206/1‑272 (MQ=37)                                                                                              atcgaaagcgaCTCTGCCCGTCGCATACCTACGTAATGTTTAAATATTCGGAGTAATCCATGTATCGTAGAGACACGAAAACCGCGCAGAAGGATAAGTGCGGCGCGGGTAAGAACGGTTTTACCCGTGGTAACCCACAGACCGGCACGCCAGCCACCGATCTGGATGATGACTACTTTGACATGTTGCAGGAGGAACTTTGCAGCGTGGTGGAGGCATCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTcgcgcg                                                                                                                                                  <  2:78985/265‑1 (MQ=25)                                                                                                    aCAAACTCTGCCCGTCGCATACCTACGTAATTTTTAAATATCCGGAGTAATCCATGCATCGTATAGACACGAAAACCGCGCAGAAGGATAAGTTCGGCGCGGGTAAGAACGGTTTTACCCGTGGTAACCCCCAGACCGGCACGCCTGCCGCCGAt                                                                                                                                                                                                                                                                    >  1:443706/1‑155 (MQ=255)                                                                                                        aCTCTGCCCGTCGCATACCTACGTAATTTTTAAATATCCGGAGTAATCCATGCATCGTATAGACACGAAAACCGCGCAGAAGGATAAGTTCGGCGCGGGTAAGAACGGTTTTACCCGTGGTAACCCCCAGACCGGCACGCCTGCCGCCGATCTgg                                                                                                                                                                                                                                                                <  2:443699/155‑1 (MQ=255)                                                                                                              cccGTCGCATACCTACGTAATTTTTAAATATCCGGAGTAATCCATGCATCGTATAGACACGAAAACCGCGCAGAAGGATAAGTTCGGCGCGGGTAAGAACGGTTTTACCCGTGGTAACCCCCAGACCGGCACGCCTGCCACCGATCTGGATGATGACTACTTTGACATGTTGCAGGAGGAACTTTGCAGCGTGGTGGAGTCATCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTcg                                                                                                                                                      >  1:78986/1‑255 (MQ=255)                                                                                                                                 aTTTTTAAATATCCGGAGTAATCCATGCATCGTATAGACACGAAAACCGCGCAGAAGGATAAGTTCGGCGCGGGTAAGAACGGTTTTACCCGTGGTAACCCCCAGACCGGCACGCCTGCCAcc                                                                                                                                                                                                                                                                       <  1:91375/123‑1 (MQ=255)                                                                                                                                    tttAAATATCCGGAGTAATCCATGCATCGTATAGACACGAAAACCGCGCAGAAGGATAAGTTCGGCGCGGGTAAGAACGGTTTTACCCGTGGTAACCCCCAGACCGGCACGCCTGCCACgaataaactcaccacgtaaatcaggcaatttatttgtcggataagcctttgccagttccgggtattc                                                                                                                                                                                                     >  2:542862‑M1/1‑119 (MQ=255)                                                                                                                                        aaTATCCGGAGTAATCCATGCATCGTATAGACACGAAAACCGCGCAGAAGGATAAGTTCGGCGCGGGTAAGAACGGTTTTACCCGTGGTAACCCCCAGACCGGCACGCCTGCCACgaataaactcaccacgtaaatcaggcaatttatttgtcggataagcctttgccagttccgggtattcttca                                                                                                                                                                                                 <  1:542871‑M1/186‑72 (MQ=255)                                                                                                                                                      tCCATGCATCGTATAGACACGAAAACCGCGCAGAAGGATAAGTTCGGCGCGGGTAAGAACGGTTTTACCCGTGGTAACCCCCAGACCGGCACGCCTGCCACCGATCTGGATGATGACTACTTTGACATGTTGCAGGAGGAACTTTGCAGCGTGGTGGAGGCATCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCa                                                                                          >  1:453569/1‑275 (MQ=255)                                                                                                                                                           gcctcaggangACAGGGAAAGCGCGCGGAGGGTTAAAGTCGGCGCGGGTAATGACGGTTTTCCCCGTCGTAACCCTCAGGCAGGCACGACTGCCACCGATCTCGATGAAGACTATGTGGACTTGTGGCGGGACGAACTTTGCAGACGGGTGGAGGCATCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGAAAGAATCAGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACgg                                                                                     <  2:271612/265‑1 (MQ=17)                                                                                                                                                           gCATCGTATAGACACGAAAACCGCGCAGAAGGATAAGTTCGGCGCGGGTAAGAACGGTTTTACCCGTGGTAACCCCCAGACCGGCACGCCGGCCACCGATCTGGATGATGACTACTTTGACATGTTGCAGGAGGAACTTTGCAGCGTGGTGGAGGCATCCGGTCCCAGCCTGGAGAAGGGGCGNCACGACCAGTTACTTAAAGCACTTCGCGCGCAGCTGGTAAGCCGCAAGAATCCGCTTGGCGATAACAAATCGGATGGCACTGTGCAAACgg                                                                                     >  1:562222/1‑275 (MQ=255)                                                                                                                                                                     gACACGAAAACCGCGCAGAAGGATAAGTTCGGCGCGGGTAAGAACGGTTTTACCCGTGGTAACCCCCAGACCGGCACGCCTGCCACCGATCTGGATGATGACTACTTTGACATGTTGCAGGAGGAACTTTGCAGCGTGGTGGAGGCATCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAGTCCGTTTGGCGATATCaaa                                                                                                           <  1:586346/243‑1 (MQ=255)                                                                                                                                                                      acacGAAAACCGCGCAGAAGGATAAGTTCGGCGCGGGTAAGAACGGTTTTACCCGTGGTAACCCCCAGACCGGCACGCCTGCCACCGATCTGGATGATGACTACTTTGACATGTTGCa                                                                                                                                                                                                                                       >  2:288128/1‑118 (MQ=255)                                                                                                                                                                          gaaaaaaggggggAAGGATAATATGTGCGCGGGTAATCACGGTNTTACCCGTGTTAACCCCCAGACCGGCACGCCTGCCACCGATCTGGATGATGACTAGTTTGACATGTTGCAGGAGGAACTTGGCATCGTGGTGGAGGCACCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCCCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAAcc                                                                         <  2:453562/260‑1 (MQ=17)                                                                                                                                                                          gAAAACCGCGCAGAAGGATAAGTTCGGCGCGGGTAAGAACGGTTTTACCCGTGGTAACCCCCAGACCGGCACGCCTGCCACCGATCTGGATGATGACTACTTTGACATGTTGCaggag                                                                                                                                                                                                                                   <  1:288133/118‑1 (MQ=255)                                                                                                                                                                           aaaaCCGCGCAGAAGGATAAGTTCGGCGCGGGTAAGAACGGTTTTACCCGTGGTAACCCCCAGACCGGCACGCCTGCCACCGATCTGGATGATGACCACTTTGACATGTTGCAGGAGGAACTTTGCAGCGTGGTGGAGGCATCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTCACTTACCGCACCTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGatat                                                                                                               >  1:4399/1‑233 (MQ=255)                                                                                                                                                                           aaaaCCGCGCAGAAGGATAAGTTCGGCGAGGGTAAGAACGGTTTTACCCGTGGTAACCCCCAGACCGGCACGCCTGCCACCGATCTGGATGATGACTACTTTGACATGTTGCAGGAGGAACTTTGCAGCGTGGTGGAgg                                                                                                                                                                                                             >  1:487068/1‑139 (MQ=255)                                                                                                                                                                               ccGCGCAGAAGGATAAGTTCGGCGCGGGTAAGAACGGTTTTACCCGTGGTAACCCCCAGACCGGCACGCCTGCCACCGATCTGGATGATGACTACTTTGACATGTTGCAGGAGGAACTTTGCAGCGTGGTGGAGGCATc                                                                                                                                                                                                         <  2:487061/139‑1 (MQ=255)                                                                                                                                                                                    cAGAAGGATAAGTTCGGCGCGGGTAAGAACGGTTTTACCCGTGGTAACCCCCAGACCGGCACGCCTGCCACCGATCTGGATGATGACTACTTTGACATGTTGCAGGAGGAACTTTGCAGCgtgg                                                                                                                                                                                                                   >  1:409693/1‑124 (MQ=255)                                                                                                                                                                                      gAAGGATAAGTTCGGCGCGGGTAAGAACGGTTTTACCCGTGGTAACCCCCAGACCGGCACGCCTGCCACCGATCTGGATGATGACTACTTTGACATGTTGCAGGAGGAACTTTGCAGCGTGGTGGAGGCATCCGGTGCCAGCCTGGAGAAGGGGCGGCa                                                                                                                                                                              <  2:174177/159‑1 (MQ=255)                                                                                                                                                                                        aGGATAAGTTCGGCGCGGGTAAGAACGGTTTTACCCGTGGTAACCCCCAGACCGGCACGCCTGCCACCGATCTGGATGATGACTACTTTGACATGTTGCAGGAGGAACTTTGCAGCGTGGTGGa                                                                                                                                                                                                               <  2:409686/124‑1 (MQ=255)                                                                                                                                                                                                         ggTAAGAACGGTTTTACCCGTGGTAACCCCCAGACCGGCACGCCTGCCACgaataaactcaccacgtaaatcaggcaatttatttgtcggataagcctttgccagttccgggtattcttcagcagaaaaagcggcac                                                                                                                                                                                 >  1:51226‑M1/1‑50 (MQ=255)                                                                                                                                                                                                             aGAACGGTTTTACCCGTGGTAACCCCCAGACCGGCACGCCTGCCACgaataaactcaccacgtaaatcaggcaatttatttgtcggataagcctttgccagttccgggtattcttcagcagaaaaagcggcaccatt                                                                                                                                                                             <  2:51226‑M1/137‑92 (MQ=255)                                                                                                                                                                                                               aaCGGTTTTACCCGTGGTAACCCCCAGACCGGCACGCCTGCCACCGATCTGGATGATGACTACTTTGACATGTTGCAGGAGGAACTTTGCAGCGTGGTGGAGGCATCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCg                                                                                                                                                             >  2:422140/1‑151 (MQ=255)                                                                                                                                                                                                                   gTTTTACCCGTGGTAACCCCCAGACCGGCACGCCTGCCACCGATCTGGATGATGACTACTTTGACATGTTGCAGGAGGAACTTTGCAGCGTGGTGGAGGCATCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACt                                                                                                                                                         <  1:422147/151‑1 (MQ=255)                                                                                                                                                                                                                              ggTAACCCCCAGACCGGCACGCCTGCCACCGATCTGGATGATGACTACTTTGACATGTTGCAGGAGGAACTTTGCAGCGTGGTGGAGGCATCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACGGGGCAAACGGCTCTCGAAACCCTTGGTTTGGGAGACGGcgctgcgttaccggtgggggtcccgggtccggggcctt                   >  2:239715‑M1/1‑236 (MQ=255)                                                                                                                                                                                                                                        aGACCGGCACGCCTGCCACCGATCTGGATGATGACTACTTTGACATGTTGCAGGAGGAACTTTGCAGCGTGGTGGAGGCATCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAG                                                          >  2:77994‑M1/1‑225 (MQ=255)                                                                                                                                                                                                                                        aGACCGGCACGCCTGCCACCGATATGGATGATGACTACTTTGACATGTTGCAAGAGGAACTTTGCAGCGTGGTGGAGGCATCCGGTGCCAGCCTGGAGAAGGAGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATACGCTTGGCCATATCAAAt                                                                                                          >  1:227101/1‑177 (MQ=14)                                                                                                                                                                                                                                         gACCGGCACGCCTGCCACCGATCTGGATGATGACTACTTTGACATGTTGCAGGAGGAACTTTGCAGCGTGGTGGAGGCATCCGGTGCCAGCCTGGAGAAGGGGCGGCa                                                                                                                                                                              >  2:432848/1‑108 (MQ=40)                                                                                                                                                                                                                                            cGGCACGCCTGCCACCGATCTGGATGATGACTACTTTGACATGTTGCAGGAGGAACTTTGCAGCGTGGTGGAGGCATCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctc                                                      <  1:77995‑M1/225‑4 (MQ=255)                                                                                                                                                                                                                                             ggCACGCCTGCCACCGATCTGGATGATGACTACTTTGACATGTTGCAGGAGGAACTTTGCAGCGTGGTGGAGGCATCCGGTGCCAGCCTGGAGAAGGGGCGGCACGAc                                                                                                                                                                          <  1:432855/108‑1 (MQ=255)                                                                                                                                                                                                                                              gCACGCCTGCCACCGATCTGGATGATGACTACTTTGACATGTTGCAGGAGGAACTTTGCAGCGTGGTGGAGGCATCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAAt                                                                                                                             >  1:94240/1‑152 (MQ=255)                                                                                                                                                                                                                                               cACGCCGGCCACCGATCTGGAGGATGACTACTTTGACATGTTGCAGGGGGAACTTTGCAGCGTGGTGGAGGCATCCGGTGCCAGCCTGGAGAAGGGGCTGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCtata  <  1:221645/274‑1 (MQ=255)                                                                                                                                                                                                                                                  gCCTGCCACCGATCTGGATGATGACTACTTTGACATGTTGCAGGAGGAACTTTGCAGCGTGGTGGAGGCATCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGt                                                                                                                         <  2:94239/152‑1 (MQ=255)                                                                                                                                                                                                                                                    cTGCCACCGATCTGGATGATGACTACTTTGACATGTTGCAGGAGGAACTTTGCAGCGTGGTGGAGGCATCCGGTGc                                                                                                                                                                                                   >  2:135847/1‑76 (MQ=255)                                                                                                                                                                                                                                                        cACCGATCTGGATGATGACTACTTTGACATGTTGCAGGAGGAACTTTGCAGCGTGGTGGAGGCATCCGGTGCCAGc                                                                                                                                                                                               <  1:135848/76‑1 (MQ=255)                                                                                                                                                                                                                                                          |                                                                                                                                                                                                                                                                       ACATGCCAGCCACCACCAACTCCACCTGGATGACATGTGGCGATCCCTGTGATTCCGCACTGCGTATCTGGGGTGACACCGTTGTCGAGTGTGTGCTTAACAAACTCTGCCCGTCGCATACCTACGTAATTTTTAAATATCCGGAGTAATCCATGCATCGTATAGACACGAAAACCGCGCAGAAGGATAAGTTCGGCGCGGGTAAGAACGGTTTTACCCGTGGTAACCCCCAGACCGGCACGCCTGCCACCGATCTGGATGATGACTACTTTGACATGTTGCAGGAGGAACTTTGCAGCGTGGTGGAGGCATCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATA  >  CP009273/1202805‑1203316

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.