New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP009273	= 1203054	32 (0.830)	7 (0.190)	6/304	NT	14.1%	coding (98/630 nt)	stfP	e14 prophage; uncharacterized protein
	?	CP009273	1204898 =	54 (1.450)					pseudogene (178/501 nt)	stfE	pseudogene, e14 prophage; side tail fiber protein fragment family;Phage or Prophage Related

GCGGCACCTAAACCATCCACTGATTGTTTATATGTTTTAAAGGTTCCATAATCCGGGGCTGGTAATCCGGCATCGTTTGTGTTTCCTCTTTTGATAATGTCAGTGCCACTATTTACCCATATTTCATCAAAATAGAAATTAATCGTTGCATCAGTCACAATCGTGGATCTTGACGGTAATCCATGAGCATGATCCTCCGTTGCATACCCCTGAATACTTAAAATAGAGCGACCTGT‑ATCAATCCCCCGCCCGTCATCCCAGCCACGAATAAACTCACCACGTAAATCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTA  >  CP009273/1204633‑1205158                                                                                                                                                                                                                                                                           |                                                                                                                                                                                                                                                                     gCGGCACCTAAACCATCCACTGATTGTTTATATGTTTTAAAGGTTCCATAATCCGGGGCTGGTAATCCGGCATCGTTTGTGTTTCCTCTTTTGATAATGTCAGTGCCACTATTTACCCATATTTCATCAAAATAGACATTAATCGTTGCATCAGTCACAATCGTGGATCTTGACGGTAATCCATGAGCATGATCCTCCGTTGCATACCCCTGACTACTTAAAATAGAGCGACCTGT‑ATCAATCCCCCGCCCGTCATCCCACCCCCGAATAAAcct                                                                                                                                                                                                                                                             >  1:50326/1‑273 (MQ=255)                                     ttAAAGGTTCCATAATCCGGGGCTGGTAATCCGGCATCGTTTGTGTTTCCTCTTTTGATAATGTCAGTGCCACTATTTACCCATATTTCATCAAAATAGAAATTAATCGTTGCATCAGTCACAATCGTGGATCTTGACGGTAATCCATGAGCATGATCCTCCGTTGCATACCCCTGAATACTTAAAATAGAGCGACCTGT‑ATCAATCCCCCGCCCGTCATCCCAGCCACGAATAAACTCACCACGTAAATCAGGCAATATATTTGTCGGATAAGc                                                                                                                                                                                                                         >  1:37944/1‑275 (MQ=255)                                             tCCATAATCCGGGGCTGGTAATCCGGCATCGTTTGTGTTTCCTCTTTTGATAATGTCAGTGCCACTATTTACCCATATTTCATCAAAATAGAAATTAATCGTTGCATCAGTCACAATCGTGGATCTTGACAGTAATCCATGAGCATGATCCTCCGTTGCTGACGCCTGAATACTTAAAATAGAGAGACCTGT‑ATCAATACCCCGCACCACATCCCAGACACGAATAAACCAACCACGTAAATAAGGAAAGCTATCATTTGTATAAGCCtttnn                                                                                                                                                                                                                   >  2:202492/1‑271 (MQ=255)                                                              gTAATCCGGCATCGTTTGTGTTTCCTCTTTTGATAATGTCAGTGCCACTATTTACCCATATTTCATCAAAATAGAAATTAATCGTTGCATCAGTCACAATCGTGGATCTTGACGGTAATCCATGAGCATGATCCTCCGTTGCATACCCCTGAATACTTAAAATAGAGCGACCTGT‑ATCAATCCCCCGCCCGTCATCCCAGCCACGAATAAACTCACCACGTAAAt                                                                                                                                                                                                                                                  >  2:585179/1‑225 (MQ=255)                                                                  tCCGGCATCGTTTGTGTTTCCTCTTTTGATAATGTCAGTGCCACTATTTACCCATATTTCATCAAAATAGAAATTAATCGTTGCATCAGTCACAATCGTGGATCTTGACGGTAATCCATGAGCATGATCCTCCGTTGCATACCCCTGAATACTTAAAATAGAGCGACCTGT‑ATCAATCCCCCGCCCGTCATCCCAGCCACGAATAAACTca                                                                                                                                                                                                                                                            <  1:132001/211‑1 (MQ=255)                                                                  tCCGGCATCGTTTGTGTTTCCTCTTTTGATAATGTCAGTGCCACTATTTACCCATATTTCATCAAAATAGAAATTAATCGTTGCATCAGTCACAATCGTGGATCTTGACGGTAATCCATGAGCATGATCCTCCGTTGCATACCCCTGAATACTTAAAATAGAGCGACCTGT‑ATCAATCCCCCGCCCGTCATCCCAGCCACGAATAAACTCACCACGTAAATCAgg                                                                                                                                                                                                                                              <  1:585188/225‑1 (MQ=255)                                                                                  ttttattttttCATTATGTCAGTCAAACTATTTACCCATATTTCATCAATATAGACATTAATCGTTTCATCAGTCACAATCGTGTATCTTGACGGTAATACATGAGCATGATCCTCCGTTGCATACCCCTGAATACTTAAAATAGCGCGACCTGT‑ATCAATCCCCCGCCCGTCATCCCAGCCACGAATAAACTCACCACGTAAATCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCAtt                                                                                                                                                                            <  2:570167/268‑1 (MQ=255)                                                                                   tctggggtgacaacgttgtcgagtgtgtgcttaacaaactctgcccgtctcatacctacgtaatttttaaatatccggagtantccatgcancgtatagacacgtaaaccgcgcagaaggataagttcggcgcgggtaagaacggttttacccgtggtaacccccagaccggcacgcctgccacGAATAAACTCACCACGTAAATCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCAtt                                                                                                                                                                            <  1:478562‑M2/91‑1 (MQ=255)                                                                                    ctggggtgacaccgttgtcgagtgtgtgcttaacaaactctgcccgtcgcatacctacgtaatttttaaatatccggagtaatccatgcatcgtatagacacgaaaaccgcgcagaaggataagttcggcgcgggtaagaacggttttacccgtggtaacccccagaccggcacgcctgccacGAATAAACTCACCACGTAAATCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAg                                                                                                                                                                                                                >  1:206259‑M2/184‑238 (MQ=255)                                                                                        ggtgacaccgttgtcgagtgtgtgcgtaacaaactctgcccgtcgcatacctacgtaatttttaaatatccggagtaatccatgcatcgtatagacacgaaaaccgcgcagaaggataagttcggcgcgggtaagaacggttttacccgtggtaacccccagaccggcacgcctgccacGAATAAACTCACCACGTAAATCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTcc                                                                                                                                                                                                            <  2:206255‑M2/59‑1 (MQ=255)                                                                                                aaTGTCAGTGCCACTATTTACCCATATTTCACCAAAATAGAAATTAATCGTTGCATCAGTCACAATCGTGGATCTTGACGGTAATCCATGAGCATGATCCTCCGTTGCATACCCCTGAACACTTAAAATAGAGCGACCTGT‑ATCAATCCCCCGCCCGACATCCAAGCCACGAATAAACTCACCACGTAAATCAGGCAATTTATTTGTCGGATAAGCCTTTCCAAGTTCCGGGAATTCTACGGCAGAAAAGTAGGCAACATNGCGTTTccgcaagc                                                                                                                                                              >  2:527638/1‑275 (MQ=255)                                                                                                   gTCAGTGCCACTATTTACCCATATTTCATCAAAAAAGAAATTAATCGTTGCATCAGTCACAATCGTGGATCTTGACGGTAATCCATGAGCATGATCCTCCGTTGCATACCCCTGAATACATAAAATAGTGCGACCTGT‑ATCAATCACCCGCCCGTCATCCCACCCACGAAGAAAATCACCACGNAAATCAGANAATTTATATGTCGGATAAGCATTTGCCAGTTCGGGGAATTATTCAGCAAAAAAAGCGACACCATTCCATTCcacccagc                                                                                                                                                              >  1:472258/1‑272 (MQ=255)                                                                                                                  tACCCATATTTCATCAAAATAGAAATTAATCGTTGCATCAGTCACAATCGTGGATCTTGACGGTAATCCATGAGCATGATCCTCCGTTGCATACCCCTGAATACTTAAAATAGAGCGACCTGT‑ATCAATCCCCCGCCCGTCATCCCAGCCACGAATAAACTCACCACGTAAATCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTg                                                                                                                                            >  1:129172/1‑275 (MQ=255)                                                                                                                        tatTTCATCAAAATAGAAATTAATCGTTGCATCAGTCACAATCGTGGATCTTGACGGTAATCCATGAGCATGATCCTCCGTTGCATACCCCTGAATACTTAAAATAGAGCGACCTGT‑ATCAATCCCCCGCCCGTCATCCCAGCCACGAATAANCTCACCACGTAAATCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAg                                                                                                                                         >  1:603215/1‑272 (MQ=255)                                                                                                                               tcaAAATAGAAATTAATCGTTGCATCAGTCACAATCGTGGATCTTGACGGTAATCCATGAGCATGATCCTCCGTTGCATACCCCTGAATACTTAAAATAGAGCGACCTGT‑ATCAATCCCCCGCCCGTCATCCCAGCCACGAATAAACTCACCACGt                                                                                                                                                                                                                                                      >  1:69722/1‑156 (MQ=255)                                                                                                                                   aaTAGAAATTAATCGTTGCATCAGTCACAATCGTGGATCTTGACGGTAATCCATGAGCATGATCCTCCGTTGCATACCCCTGAATACTTAAAATAGAGCGACCTGT‑ATCAATCCCCCGCCCGTCATCCCAGCCACGAATAAACTCACCACGTAACTCAGGCAATTTATTTGTCGGATAAGCATTTGCCAGTGCCGGGTCTTCTTAAGCAGAAAAAGCGGCACCATTGCATTTCAGGCAGCCTGTTGGCTGCGTGGCAGACGGCACCGGAAACgat                                                                                                                           >  2:672526/1‑273 (MQ=255)                                                                                                                                   aaTAGAAATTAATCGTTGCATCAGTCACAATCGTGGATCTTGACGGTAATCCATGAGCATGATCCTCCGTTGCATACCCCTGAATACTTAAAATAGAGCGACCTGT‑ATCAATCCCCCGCCCGTCATCCCAGCCACGAATAAACTCACCACGTAAAt                                                                                                                                                                                                                                                  <  2:69721/156‑1 (MQ=255)                                                                                                                                    aTAGAAATTAATAGTTGCAACGGTCACAATCGTGGATCTTGACGGTAATCCATGAGCATGATCCTCCGTTGCATACCCCTGAATACTTAAAATAGAGCGACCTGT‑ATCAATCCCCCGCCCGTCATCCCAGCCACGAATAAACTCACCACGTAAATCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGa                                                                                                                          <  2:129171/275‑1 (MQ=255)                                                                                                                                         taTTTATCTTTGTTTCAGTCACAATCGTGTATCTTGACGGTAATCCATGAGCCTGATCCTCCGTTGCATACCCCTGAATACTTAAAATAGAGCGACCTGT‑ATCAATCCCCCGCCCGTCATCCCAGCCACGAATAAACTCACCACGTAAATCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCa                                                                                                                     <  2:37944/274‑1 (MQ=255)                                                                                                                                                    tttaaatatccggagtaatccatgcatcgtatagacacgaaaaccgcgcagaaggataagttcggcgcgggtaagaacggttttacccgtggtaacccccagaccggcacgcctgccacGAATAAACTCACCACGTAAATCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTAttc                                                                                                                                                                                                    >  2:542862‑M2/120‑186 (MQ=255)                                                                                                                                                     cATCAGTCACAATCGTGGATCTTGACGGTAATCCATGAGCATGATCCTCCGTTGCATACCCCTGAATACTTAAAATAGAGCGACCTGT‑ATCAATCCCCCGCCCGTCATCCCAGCCACGAATAAACTCACCACGTAAATCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGc                                                                                                                                                      >  2:633933/1‑230 (MQ=255)                                                                                                                                                        aatatccggagtaatccatgcatcgtatagacacgaaaaccgcgcagaaggataagttcggcgcgggtaagaacggttttacccgtggtaacccccagaccggcacgcctgccacGAATAAACTCACCACGTAAATCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTca                                                                                                                                                                                                <  1:542871‑M2/71‑1 (MQ=255)                                                                                                                                                         aGTCACAATCGTGGATCTTGACGGTAATCCATGAGCATGATCCTCCGTTGCATACCCCTGAATACTTAAAATAGAGCGACCTGT‑ATCAATCCCCCGCCCGTCATCCCAGCCACGAATAAACTCACCACGTAAATCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAg                                                                                                                                                  <  1:633942/230‑1 (MQ=255)                                                                                                                                                          gTCACAATCGTGGATCTTGACGGTAATCCATGAGCATGATCCTCCGTTGCATACCCCTGAATACTTAAAATAGAGCGACCTGT‑ATCAATCCCCCGCCCGTCATCCCAGCCACGAATAAACTCACCACGTAAATCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGc                                                                                                                                                      >  1:551091/1‑225 (MQ=255)                                                                                                                                                              caATCGTGGATCTTGACGGTAATCCATGAGCATGATCCTCCGTTGCATACCCCTGAATACTTAAAATAGAGCGACCTGT‑ATCAATCCCCCGCCCGTCATCCCAGCCACGAATAAACTCACCACGTAAATCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAg                                                                                                                                                  <  2:551082/225‑1 (MQ=255)                                                                                                                                                                           tGACGGTAATCCATGAGCATGATCCTCCGTTGCATACCCCTGAATACTTAAAATAGAGCGACCTGT‑ATCAATCCCCCGCCCGTCATCCCAGCCACGAATAAACTCACCACGt                                                                                                                                                                                                                                                      >  2:135358/1‑112 (MQ=255)                                                                                                                                                                               ggTAATCCATGAGCATGATCCTCCGTTGCATACCCCTGAATACTTAAAATAGAGCGACCTGT‑ATCAATCCCCCGCCCGTCATCCCAGCCACGAATAAACTCACCACGTAAAt                                                                                                                                                                                                                                                  <  1:135359/112‑1 (MQ=255)                                                                                                                                                                                  aaTCCATGAGCATGATCCTCCGTTGCATACCCCTGAATACTTAAAATAGAGCGACCTGT‑ATCAATCCCCCGCCCGTCATCCCAGCCACGAATAAACTCACCACGTAAATCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCAtt                                                                                                                                                                       >  2:710632/1‑184 (MQ=255)                                                                                                                                                                                   aTCCATGAGCATGATCCTCCGTTGCATACCCCTAAATACTTAAAATAGAGCGACCTGT‑AGCAATCCCCCGCCCGTCATCCCAGCCACGAATAAACTCACCACGTAAATCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgaga                                                                           >  1:184810‑M2/1‑248 (MQ=255)                                                                                                                                                                                      cATGAGCATGATCCTCCGTTGCATACCCCTGAATACTTAAAATAGAGCGACCTGT‑ATCAATCCCCCGCCCGTCATCCCAGCCACGAATAAACTCACCACGTAAATCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTcag                                                                                                                                                                   <  1:710642/184‑1 (MQ=255)                                                                                                                                                                                              tGATCCTCCGTTGCATACCCCTGAATACTTAAAATAGAGCGACCTGT‑ATCAATCCCCCGCCCGTCATCCCAGCCACGAATAAACTCACCACGTAAATCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCTAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcac                                                                <  1:367257‑M2/275‑39 (MQ=255)                                                                                                                                                                                                           cATACCCCTGAATACTTAAAATAGAGCGACCTGT‑ATCAATCCCCCGCCCGTCATCCCAGCCACGAATAAACTCACCACGTAAATCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACCGGTAAGGCAGAGCCTGCACCCAAACCAACGTATATGAAAAAGAAGAAAAAAcaaacaaaccaa                                                   >  2:35486/1‑271 (MQ=255)                                                                                                                                                                                                           cATACCCCTGAATACTTAAAATAGAGCGACCTGT‑ATCAATCCCCCGCCCGTCATCCCAGCCACGAATAAACTCACCACGTAAATCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGG‑TATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatt                                                  <  1:157575‑M2/275‑53 (MQ=255)                                                                                                                                                                                                             tACCCCTGAATACTTAAAATAGAGCGACCTGT‑ATCAATCCCCCGCCCGTCATCCCAGCCACGAATAAANTCACCACGTAAATCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATg                                                                        <  1:550212/252‑1 (MQ=255)                                                                                                                                                                                                                cccTGAATACTTAAAATAGAGCGACCTGT‑ATCAATCCCCCGCCCGTCATCCCAGCCACGAATAAACTCACCACGTAAATCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGacac                                                                                                                       >  2:325580/1‑202 (MQ=255)                                                                                                                                                                                                                  cTGAATACTTAAAATAGAGCGACCTGT‑ATCAATCCCCCGCCCGTCATCCCAGCCACGAATAAACTCACCACGTAAATCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGcc                                                                                                                                      >  2:469955/1‑185 (MQ=255)                                                                                                                                                                                                                  cTGAATACTTAAAATAGAGCGACCTGT‑ATCAATCCCCCGCCCGTCATCCCAGCCACGAATAAACTCACCACGTAAATCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaa                                                                                           <  2:133193‑M2/228‑12 (MQ=255)                                                                                                                                                                                                                    gAATACTTAAAATAGAGCGACCTGT‑ATCAATCCCCCGCCCGTCATCCCAGCCACGAATAAACTCACCACGTAAATCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAAc                                                                                                                   <  1:325586/202‑1 (MQ=255)                                                                                                                                                                                                                     aaTACTTAAAATAGAGCGACCTGT‑ATCAATCCCCCGCCCGTCATCCCAGCCACGAATAAACTCACCACGTAAATCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcg                                          <  1:239720‑M2/274‑61 (MQ=255)                                                                                                                                                                                                                      aTACTTAAAATAGATCGACCTGT‑ATCAATCCCCCGCCCGTCATCCCAGCCACGAATAAACTCACCACGTAAATCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCTGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACgg                                                                                                                                  <  1:469962/185‑1 (MQ=255)                                                                                                                                                                                                                      aTACTTAAAATAGAGCGACCTGT‑ATCAATCCCCCGCCCGTCATCCCAGCCACGAATAAACTCACCACGTAAATCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaacca                                                                                       >  1:133194‑M2/1‑213 (MQ=255)                                                                                                                                                                                                                         ggtaagaacggttttacccgtggtaacccccagaccggcacgcctgccacGAATAAACTCACCACGTAAATCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCAc                                                                                                                                                                                >  1:51226‑M2/51‑137 (MQ=255)                                                                                                                                                                                                                         cTTAAATTAGACCG‑CCTGTTATCATTCCCCCCCCCGTCATCCCAGCCACGAATAAACTCACCACGTAAATCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaa                                     >  1:202496‑M2/1‑210 (MQ=255)                                                                                                                                                                                                                            aaaaTAGAGCGACCTGT‑ATCAATCCCCCGCCCGTCATCCCAGCCACGAATAAACTCACCACGTAAATCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACAGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagaaccgtttgcacagtcccatccgattttatatcgccaaacag                                  <  1:375054‑M2/275‑69 (MQ=255)                                                                                                                                                                                                                             agaacggttttacccgtggtaacccccagaccggcacgcctgccacGAATAAACTCACCACGTAAATCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCAtt                                                                                                                                                                            <  2:51226‑M2/91‑1 (MQ=255)                                                                                                                                                                                                                                   agCGACCTGT‑ATCAATCCCCCGCCCGTCATCCCAGCCACGAATaa                                                                                                                                                                                                                                                                 >  2:550078/1‑45 (MQ=255)                                                                                                                                                                                                                                    ttttacccgtggtaacccccagaccggcACGCCTGCCACGAATAAACTCACCACGTAAATCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGACAAGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggatttcgagagccgtttgcacagtgccatccgaattgatatcgccaaacggaatcttg                           <  1:62414‑M2/262‑76 (MQ=255)                                                                                                                                                                                                                                    gCGACCTGT‑ATCAATCCCCCGCCCGTCATCCCAGCCACGAATAAACTCACCACGTAAATCAGGCAATTTATTTGTCGGATAAGCCGTTGCCAGTTCTGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttg                           >  1:383679‑M2/1‑199 (MQ=255)                                                                                                                                                                                                                                       aCCTGT‑ATCAATCCCCCGCCCGTCATCCCAGCCACGAATAAACTc                                                                                                                                                                                                                                                             <  1:550087/45‑1 (MQ=255)                                                                                                                                                                                                                                       aCCTGT‑ATCAATCCCCCGCCCGTCATCCCAGCCACGAATAAACTCACCACGTAAATCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGacac                                                                                                                       >  1:523831/1‑179 (MQ=255)                                                                                                                                                                                                                                       aCCCGT‑GTTAACCCCCAGACCGGCACGCCTGCCACGAATAAACTCACCACGTAAATCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGNACCATTGCATTTAAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgattttatatcgccaaacggattcttgc                          >  1:598343‑M2/1‑196 (MQ=255)                                                                                                                                                                                                                                        ccTGT‑ATCAATCCCCCGTCCGTCATCCCAGCCACGAATAAACTCACCACGTAAATCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAAcc                                                                                                                              >  2:25835/1‑171 (MQ=255)                                                                                                                                                                                                                                        ccTGT‑ATCAATCCCCCGCCCGTCATCCCAGCCACGAATAAACTCACCACGTAAATCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAAt                                                                                                            >  1:53234/1‑189 (MQ=255)                                                                                                                                                                                                                                           gT‑ATCAATCCCCCGCCCGTCATCCCAGCCACGAATAAACTCACCACGTAAATCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAAc                                                                                                                   <  2:523824/179‑1 (MQ=255)                                                                                                                                                                                                                                            t‑ATCAATCCCCCGTCCGTCATCCCAGCCACGAATAAACTCACCACGTAAATCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGa                                                                                                                          <  1:25835/171‑1 (MQ=255)                                                                                                                                                                                                                                            t‑ATCAATCCCCCGCCCGTCATCCCAGCCACGAATAAACTCACCACGTAAATCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCag                                                                                                        <  2:53234/189‑1 (MQ=255)                                                                                                                                                                                                                                                  aTCCCCCGCCCGTCATCCCAGCCACGAATAAACTCACCACGTAAATCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTAtt                                                                                                                                                                                                     >  1:67021/1‑91 (MQ=255)                                                                                                                                                                                                                                                  aTCCCCCGCCCGTCATCCCAGCCACGAATAAACTCACCACGTAAATCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGacaaa                                                                                                                                                                                       >  1:298471/1‑105 (MQ=255)                                                                                                                                                                                                                                                  aTCCCCCGCCCGTCATCCCAGCCACGAATAAACTCACCACGTAAATCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAgg                                                                                                                                        >  2:602820/1‑152 (MQ=255)                                                                                                                                                                                                                                                   tCCCCCGCCCGTCATCCCAGCCACGAATAAACGCACCACGTAAAt                                                                                                                                                                                                                                                  >  2:382539/1‑45 (MQ=255)                                                                                                                                                                                                                                                      cccgcccgTCATCCCAGCCACGAATAAACTCACCACGTAAATCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTAttcttc                                                                                                                                                                                                 <  2:67020/91‑1 (MQ=255)                                                                                                                                                                                                                                                      cccgcccgTCATCCCAGCCACGAATAAACTCACCACGTAAATCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCgg                                                                                                                                                                                   <  2:298465/105‑1 (MQ=255)                                                                                                                                                                                                                                                      cccgcccgTCATCCCAGCCACGAATAAACTCACCACGTAAATCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCAc                                                                                                                                    <  1:602829/152‑1 (MQ=255)                                                                                                                                                                                                                                                       ccgcccgTCATCCCAGCCACGAATAAACTCACCACGTAAATCAgg                                                                                                                                                                                                                                              <  1:382545/45‑1 (MQ=255)                                                                                                                                                                                                                                                       ccgcccgTCATCCCAGCCACGAATAAACTCACCACGTAAATCAGGCAattta                                                                                                                                                                                                                                       >  1:516575/1‑52 (MQ=255)                                                                                                                                                                                                                                                       ccgcccgTCATCCCAGCCACGAATAAACTCACCACGTAAATCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGTAAcc                                                                                                                              >  2:414464/1‑157 (MQ=255)                                                                                                                                                                                                                                                       ccgcccgTCATCCCAGCCACGAATAAACTCACCACGTAAATCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGacac                                                                                                                       >  2:405998/1‑164 (MQ=255)                                                                                                                                                                                                                                                       ccgcccgTCATCCCAGCCACGAATAAACTCACCACGTAAATCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTgg         <  1:35486/274‑1 (MQ=255)                                                                                                                                                                                                                                                           ccgTCATCCCAGCCACGAATAAACTCACCACGTAAATCAGGCAATTTATTTg                                                                                                                                                                                                                                   <  2:516568/52‑1 (MQ=255)                                                                                                                                                                                                                                                           ccgTCATCCCAGCCACGAATAAACTCACCACGTAAATCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGa                                                                                                                          <  1:414471/157‑1 (MQ=255)                                                                                                                                                                                                                                                           ccgTCATCCCAGCCACGAATAAACTCACCACGTAAATCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAAc                                                                                                                   <  1:406005/164‑1 (MQ=255)                                                                                                                                                                                                                                                            cttactcccagCCACGAATAAACGCACACCGTAAATCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGG‑TATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggcttaacagcagcgcgcgaagtg  >  2:157572‑M2/6‑175 (MQ=255)                                                                                                                                                                                                                                                             gTCATCCCAGCCACGAATAAACTCACCACGTAAATCAGGCAATTTATTTGTCGGATAAGCCTTTGc                                                                                                                                                                                                                   >  2:603107/1‑66 (MQ=255)                                                                                                                                                                                                                                                                 tCCCAGCCACGAATAAACTCACCACGTAAATCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGt                                                                                                                                                                                                               <  1:603116/66‑1 (MQ=255)                                                                                                                                                                                                                                                                           |                                                                                                                                                                                                                                                                     GCGGCACCTAAACCATCCACTGATTGTTTATATGTTTTAAAGGTTCCATAATCCGGGGCTGGTAATCCGGCATCGTTTGTGTTTCCTCTTTTGATAATGTCAGTGCCACTATTTACCCATATTTCATCAAAATAGAAATTAATCGTTGCATCAGTCACAATCGTGGATCTTGACGGTAATCCATGAGCATGATCCTCCGTTGCATACCCCTGAATACTTAAAATAGAGCGACCTGT‑ATCAATCCCCCGCCCGTCATCCCAGCCACGAATAAACTCACCACGTAAATCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTA  >  CP009273/1204633‑1205158

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.