New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP009273	1282930 =	37 (0.960)	6 (0.160)	6/298	NT	17.9%	intergenic (‑146/+64)	tyrV/tyrT	tRNA‑Tyr/tRNA‑Tyr
	?	CP009273	1283010 =	20 (0.550)					noncoding (69/85 nt)	tyrT	tRNA‑Tyr

GCGGATTCGTTGGGAAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTAATGCTTGAGATGGTGGTGGGGGAAGGATTATTCGTCGCTTCGCTCCTCACCCTTCGGGCCGTTGCCTGTGGCAACGTTCTCTCGCTTTCGCTCGAATCGAACCTTAGTCGAAGGTTCTCACCCTTCCCCGATGAGTGCAAACTTTCACAATCTCACCGAAGTTACCACATCGCTGTGGTGAATTATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCACGGGGTAATGCTTTTTACTGGCCTGCTCCCTTATCGGGAAGCGGGGCGCATCATATCAAATGACGCGCCGCTGTAAAGTGTTAC  >  CP009273/1282662‑1283163                                                                                                                                                                                                                                                                             |                                                                                                                                                                                                                                          gcgcgtctttgtttacggtaatcgaacgattattctttaatcgccagcaaaaataactggttacctttaatccgttacggatgaaaattacgcaaccagttcatttttctcaacgtaacactttacagcggcgcgtcatttgatatgatgcgccccgcttcccgataagggagcaggccagtaaaaagcattaccccgtggtggggttcccgagcggccacagggagcagactgtaaatctgccgtcatcgactgcgaaggttcgaatcctggc                                                                                                                                                                                                                                      <  2:182609‑M1/6‑4 (MQ=255)      tctttgtttaagtgaatcgaacgattattctttaatcgccagcaaaaataactggttacctttaatccgttacggatgaaaattacgcaaccagttcatttttctcaacttaacacttnacagcggcgcgtcatttgatatgatgcgccccgcttcccgataagggagcaggccagtaaaaagcattaccccgtggtggggttcccgagcggccaaagggagcagactgtaaatctgccgtcatcgacttcgaaggttcgaatCCTTcccc                                                                                                                                                                                                                                    >  1:595043‑M1/264‑271 (MQ=255)                                      atagaggtggGGTNGGGATGCGAAGATTGGGAGTCGATGGCGTCGGATTTTCATGCTGGTCTGTTTGGCCGCTCGGGAAACCCACCAGGGGTAATTCAAATTTTGCGGTAATGATTGAGATGGTGGTGGAGGGAGGATGATTCGTCGCTTCGCTCCTCACCCTGCGGGCCGTTGCCTGTGGCAACGTTCTCTCGCTTTCGCTCGAATCGAACCTTAGTCGAAGGTTCTCACCCTTCCCCGATGAGTGCAAACTTTCACAATCTCACCGAAGTTa                                                                                                                                                                                                 <  2:536103/269‑1 (MQ=255)                                                ggggAGGATTCGGTTATTCGAAGGCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCGCCAGGGGTAATTCAATTTTTGAGGTAATGCTTGAGATGGTGGTGGGGGAAGGATTATTCGTCGCTTCGCTCCTCACCCTTCGGGCCGTTGCCTGTGGCAACGTTCTCTCGCTTTCGCTCGAATCGAACCTTAGTCGAAGGTTCTCACCCTTCCCCGATGAGTGCAAACTTTCACAATCTCACCGAAGTTACCACATCGCt                                                                                                                                                                                       <  1:341754/274‑1 (MQ=255)                                                          cGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTAATGCTTGAGATGGTGGTGGGGGAAGGATTATTCGTCGCTTCGCTCCTCACCCTTCGGGCCGTTGCCTGTGGCAACGTTCTCTCGCTTTCGCTCGAATCGAACCTTAGTCGAAGGTTCTCACCCTTCCCCGATGAGTGCAAACTTTCACAATCTCACCGAAGTTACCACATCGCTGTGGTGAAtt                                                                                                                                                                             <  1:327603/274‑1 (MQ=255)                                                             aCCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTAATGCTTGAGATGGTGGTGGGGGAAGGATTATTCGTCGCTTCGCTCCTCACCCTTCGGGCCGTTGCNTGTGGCAACGTTCTCTCGCTTTCGCTCGAATCGAACCTTAGTCGAAGGTTCTCACCCTTCCCCGATTAGTg                                                                                                                                                                                                                            >  1:602817/1‑224 (MQ=255)                                                                           ttacggatgaaaattacgcaaccagttcatttttctcaacgtaacactttacagcggcgcgtcatttgatatgatgcgccccgcttcccgataagggagcaggccagtaaaaagcattaccccgtggtggggttcccgagcggccaaagggagcagactgtaaatctgccgtcatcgacttcgaaggttcgaatcc                                                                                                                                                                                                                                          <  2:76876‑M1/2‑1 (MQ=255)                                                                           ttacggatgaaaattacgcaaccagttcatttttctcaacgtaacactttacagcggcgcgtcatttgatatgatgcgccccgcttcccgataagggagcaggccagtaaaaagcattaccccgtggtggggttcccgagcggccaaagggagcagactgtaaatctgccgtcatcgacttcgaaggttcgaatCCTTccc                                                                                                                                                                                                                                     <  2:591638‑M1/7‑1 (MQ=255)                                                                               ggatgaaaattacgcaaccagttcatttttctcaacgtaacactttacagcggcgcgtcatttgatatgatgcgccccgcttcccgataagggagcaggccagtaaaaagcattaccccgtggtggggttcccgagcggccaaagggagcagactgtaaatctgccgtcatcgacttcgaaggttcgaatCCTTcc                                                                                                                                                                                                                                      >  1:76877‑M1/191‑196 (MQ=255)                                                                                                 cagttcatttttctcaacgtaacactttacagcggcgcgtcatttgatatgatgcgccccgcttcccgataagggagcaggccagtaaaaagcattaccccgtggtggggttcccgagcggccaaagggagcagactgtaaatctgccgtcatcgacttcgaaggttcgaatCCTTCCCCGATGAGTGCAAACTTTCACAATCTCACCGAAGTTACCACATCGCTgtggt                                                                                                                                                                                  <  2:152867‑M1/58‑1 (MQ=255)                                                                                                     tcatttttctcaacgtaacactttacagcggcgcgtcatttgatatgatgcgccccgcttcccgataagggagcaggccagtaaaaagcattaccccgtggtggggttcccgagcggccaaagggagcagactgtaaatctgccgtcatcgacttcgaaggttcgaatCCTTCCCCGATGAGTGCAAACTTTCACAATCTCACCGAAGTTACCACATCGCTGTGGTGAAt                                                                                                                                                                              >  1:152870‑M1/169‑230 (MQ=255)                                                                                                             cTCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTAATGCTTGAGATGGTGGTGGGGGAAGGATTATTCGTCTCTTCGCTCCTCACCCTTCGGGCCGTTGCCTGTGGCAACGTTCTCTCGCTTTCGCTCGAATCGAACCTTAGTCGAAGGTTCTCACCCTTCCCCGATGAGTGCAAACGTTCACAATCTCACCGAAGTTACCACATCGCTGTGGTGAATTATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTAc                                                                                                                         <  1:97626/275‑1 (MQ=255)                                                                                                             cTCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTAATGCTTGAGATGGTGGTGGGGGAAGGATTATTCGTAGCTTCGCTCCTCACCCTTCGGGCCGTTGCCTGAGGCAACGCTCTCTCGCTTTCGCTCGAATCGAACCCTAGTCGAAGGTTCGCACCCTTCCCCGCTGAGTGCAAACGTTCACAATCTAACCGAAGTTACAACCTCGCTGCTGTGAATAATGGTGGGGGGGGAAGGGTTGGAACCTTCGAAGTCGTTgcaggcggttcga                                                                                                                          >  2:97625/1‑262 (MQ=255)                                                                                                                        tactatgggTATTTCAAATTTTGCTGTAATGCTTGAGATGGTTGTGGGTGAATGATTATTCGTCGCTTCGCTCCTCACCCTTCGGGCCGTTGCCTGTGGCAACGTTCTCTCGCTTTCGCTCGAATCGAACCTTAGTCGAAGGTTCTCACCCTTCCCCGATGAGTGCAAACTTTCACAATCTCACCGAAGTTACCACATCGCTGTGGTGAATTATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTcc                                                                                                               <  1:18944/268‑1 (MQ=255)                                                                                                                                gTAATTCAAATTTTGAGGTAATGCTTGAGATGGTGGTGGGGGAAGGATTATTCGTCGCTTCGCTCCTCACCCTTCGGGCCGTTGCCTGTGGCAACGTTCTCTCGCTTTCGCTCGAATCGAACCTTAGTCGAAGGTTCTCACCCTTCCCCGATGAGTGCAAACTTTCACAATCTCACCGAAGTTACCACATCGCTGTGGTGAATTATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGcc                                                                                                       >  1:133548/1‑274 (MQ=255)                                                                                                                                        gtttttGAGGTAATGCTTGCGATGGTGGTGGGGGAAGGATTATTCGTCGCTTCGCGCCTCACCCTTCGGGCCGTTGCCTGTGGCAACGTTCTCTCGCTGGCGCTCGAATCGAACCTTAGTCGAAGGTTCTCACCCTGCGCCGATGAGTGCAAATTTTCACAATCTCACCGAAGTTACCACATCGCt                                                                                                                                                                                       <  2:387119/184‑1 (MQ=37)                                                                                                                                                   gttggttGGGATGGTGGTGGGGGGATGATTATTCGGCGCTTCGCTCCTCACCCGTCGGGCCGTTGCCTGTGGCAACGTTCTGTCGCTTTCGCTCGAATCGAACATTAGTCGAAGGTTCTCACCCTTCCCCGATGAGTGAAAACTTTCACAATATCACCGGAGTTACCACATCGCTGTGGTGAATTATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCACg                                                                                    <  1:451900/269‑1 (MQ=37)                                                                                                                                                         tGAGATGGTGGTGGGGGAAGGATTATTCGTCGCTTCGCTCCTCACCCTTCGGGCCGTTGCCTGTGGCAACGTTCTCTCGCTTTCGCTCGAATCGAACCTTAGTCGAAGGTTCTCACCCTTCCCCGATGAGTGCAAACTTTCACAATCTCACCGaa                                                                                                                                                                                                     >  1:91385/1‑155 (MQ=255)                                                                                                                                                             aTGGTGGTGGGGGAAGGATTATTCGTCGCTTCGCTCCTCACCCTTCGGGCCGTTGCCTGTGGCAACGTTCTCTCGCTTTCGCTCGAATCGAACCTTAGTCGAAGGTTCTCACCCTTCCCCGATGAGTGCAAACTTTCACAATCTCACCGAAGTTa                                                                                                                                                                                                 <  2:91384/155‑1 (MQ=255)                                                                                                                                                                gtggtggGGGAAGGATTATTCGTCGCTTCGCTCCTCACCCTTCGGGCCGTTGCCTGTGGCAACGTTCTCTCGCTTTCGCTCGAATCGAACCTTAGTCGAAGGTTCTCAcc                                                                                                                                                                                                                                           <  2:161434/110‑1 (MQ=255)                                                                                                                                                                gtggtggGGGAAGGATTATTCGTCGCTTCGCTCCTCACCCTTCGGGCCGTTGCCTGTGGCAACGTTCTCTCGCTTTCGCTCGAATCGAACCTTAGTCGAAGGTTCTCACCCTTCCCCGATGAGTGCAAACTTTCACAATCTCACCGAAGTTACCACATCGc                                                                                                                                                                                        >  1:20472/1‑161 (MQ=255)                                                                                                                                                                gtggtggGGGAAGGATTATTCGTCGCTTCGCTCCTCACCCTTCGGGCCGTTGCCTGTGGCAACGTTCTCTCGCTTTCGCCCGAATCGAACCTTAGTCGAAGGTTCTCACCCTTCCCCGCTGCGTGCAAACTTTCACTATCTCACCGAAGTTccc                                                                                                                                                                                               >  2:649728/1‑154 (MQ=255)                                                                                                                                                                 tggtggGGGAAGGATTATTCGTCGCTTCGCTCCTCACCCTTCGGGCCGTTGCCTGTGGCAACGTTCTCTCGCTTTCGCTCGAATCGAACCTTAGTCGAAGGTTCTCACCCTTCCCCGATGAGTGCAAACTTTCACAATCTCACCGAAGTTACCACATCGCTGTGGTGaa                                                                                                                                                                               >  1:485868/1‑169 (MQ=255)                                                                                                                                                                 tggtggGGGAAGGATTATTCGTCGCTTCGCTCCTCACCCTTCGGGCCGTTGCCTGTGGCAACGTTCTCTCGCTTTCGCTCGAATCGAACCTTAGTCGAAGGTTCTCACCCTTCCCCGATGAGTGCAAACTTTCACAATCTCACCGAAGTTACCACATCGCTGTGGTGAATTATGGTGGTGGGGGACGGa                                                                                                                                                           >  2:530691/1‑189 (MQ=255)                                                                                                                                                                    tggGGGAAGGATTATTCGTCGCTTCGCTCCTCACCCTTCGGGCCGTTGCCTGTGGCAACGTTCTCTCGCTTTCGCTCGAATCGAACCTTAGTCGAAGGTTCTCACCCTTCCCCGATGAGTGCAAACTTTCACAATCTCACCGAAGTTACCACAt                                                                                                                                                                                           <  1:649737/154‑1 (MQ=255)                                                                                                                                                                    tggGGGAAGGATTATTCGTCGCTTCGCTCCTCACCCTTCGGGCCGTTGCCTGTGGCAACGTTCTCTCGCTTTCGCTCGAATCGAACCTTAGTCGAAGGTTCTCACCCTTCCCCGATGAGTGCAAACTTTCACAATCTCACCGAAGTTACCACATCGCtgtg                                                                                                                                                                                    <  2:20472/161‑1 (MQ=255)                                                                                                                                                                    gataagggagcaggccagtaaaaagcattaccccgtggtggggttcccgagcggccaaagggagcagactgtaaatctgccgtcatcgacttcgaaggttcgaatCCTTCCCCGATGAGTGCAAACTTTCACaa                                                                                                                                                                                                               <  2:295948‑M1/29‑1 (MQ=255)                                                                                                                                                                     gggggNAGGATTATTCGTCGCTTCGCTCCTCACCCTTCGGGCCGTTGCCTGTGGCAACGTTCTCTCGCTTTCGCTCGAATCGAACCTTAGTCGAAGGTTCTCACCCTTCCCCGATGAGTGCAAACTTTCACAATCTCACCGAAGCTACCACATCGCTGTGCTGAATTATGGTGGTGGGGGAAGGATTCg                                                                                                                                                       <  1:530699/189‑1 (MQ=255)                                                                                                                                                                     gggggAAGGATTATTCGTCGCTTCGCTCCTCACCCTTCGGGCCGTTGCCTGTGGCAACGTTCTCTCGCTTTCGCTCGAATCGAACCTTAGTCGAAGGTTCTCACCCTTCCCCGATGAGTGCAAACTTTCACAATCTCACCGAAGTTACCACATCGCTGTGGTGAATTAt                                                                                                                                                                           <  2:485861/169‑1 (MQ=255)                                                                                                                                                                      ggggAAGGATTATTCGTCGCTTCGCTCCTCACCCTTCGGGCCGTTGCCTGTGGCAACGTTCTCTCGCTTTCGCTCGAATCGAACCTTAGTCGAAGGTTCTCAcc                                                                                                                                                                                                                                           <  2:442497/104‑1 (MQ=255)                                                                                                                                                                        agggagcaggccagtaaaaagcattaccccgtggtggggttcccgagcggccaaagggagcagactgtaaatctgccgtcatcgacttcgaaggttcgaatCCTTCCCCGATGAGTGCAAACTTTCACAAtctc                                                                                                                                                                                                           >  1:295954‑M1/102‑134 (MQ=255)                                                                                                                                                                                           tcgctCCTCACCCTTCGGGCCGTTGCCTGTGGCAACGTTCTCTCGCTTTCGCTCGAATCGAACCTTAGTCGAAGGTTCTCAcc                                                                                                                                                                                                                                           <  1:703442/83‑1 (MQ=255)                                                                                                                                                                                            cgctCCTCACCTTTCGGGCCGTGGCCTGTGGCAACGTTCTCTCGCTTTCGCTCGAATCGAACCTTAGTCGAAGGTTCTCACCCTTCCCNGATGAGTGCAAACTTTCACCATCTCACCGAAGTTACCACATCGCTGTGGTGAATTATGGTGGGGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCACGGGGTAATGCTTTTTACTGGCCTGCTCCCTTATCGGGAAg                                             <  1:554161/272‑1 (MQ=255)                                                                                                                                                                                                taccccgtggtggggttcccgagcggccaaagggagcagactgtaaatctgccgtcatcgacttcgaaggttcgaatCCTTCCCCGATGAGTGCAAACTTTCACAATCTCACCGAAGTTACCACATCGCTGTGGTGa                                                                                                                                                                                <  2:70430‑M1/60‑1 (MQ=255)                                                                                                                                                                                                  ccaaccTTCGGGGCGTTGCCTGTGGCAACGTTCTCTCGCTTTCGCTCGAATCGAACCTTAGTCGAAGGTTCTCACCCTTCCCCGATGAGTGCAAACTTTCACAATCTCACCGAAGTTACCACATCGCTGTGGTGAATTATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCACGGGGTAATGCTTTTTACTGGCCTGCTCCCTTATCGGGAAGCGGGGCGca                                    <  2:133547/271‑1 (MQ=255)                                                                                                                                                                                                    ccgtggtggggttcccgagcggccaaagggagcagactgtaaatctgccgtcatcgacttcgaaggttcgaatCCTTCCCCGATGAGTGCAAACTTTCACAATCTCACCGAAGTTACCACATCGCTGTGGTGAATTa                                                                                                                                                                            >  1:70431‑M1/74‑137 (MQ=255)                                                                                                                                                                                                        ttCGGGCCGTTGCCTGTGGCAACGTTCTCTCGCTTTGGCTCGAATCGAACCTTAGTCGAAGGTTCTCACCCTTCCCCGATg                                                                                                                                                                                                                                >  2:413243/1‑81 (MQ=255)                                                                                                                                                                                                        ggtggggttcccgagcggccaaagggagcagactgtaaatctgccgtcatcgacttcgaaggttcgaatCCt                                                                                                                                                                                                                                         <  1:638356‑M1/3‑1 (MQ=255)                                                                                                                                                                                                            gggttcccgagcggccaaagggagcagactgtaaatctgccgtcatcgacttcgaaggttcgaatCCTTccc                                                                                                                                                                                                                                     >  2:638347‑M1/66‑72 (MQ=255)                                                                                                                                                                                                            ggCCGTTGCCTGTGGCAACGTTCTCTCGCTTTCGCTCGAATCGACCCTTAGTCGAAGGTTCTCACCCTTCCCCGATGAGTg                                                                                                                                                                                                                            <  1:413250/81‑1 (MQ=255)                                                                                                                                                                                                             gCCGTTGCCTGTGGCAACGTTCTCTCGCTTTCGCTCGAATCGAACCTTAGTCGAAGGTTCTCACCCTTCCCCGATGAGTGCAAACTTTCACAATCTCACCGAAGTTACCACATCGCtgt                                                                                                                                                                                     >  2:666710/1‑119 (MQ=255)                                                                                                                                                                                                                    gagcggccaaagggagcagactgtaaatctgccgtcatcgacttcggaggttcgaatCCtt                                                                                                                                                                                                                                        <  1:124841‑M1/4‑1 (MQ=255)                                                                                                                                                                                                                       ttgGCAACGTTCTCTCGCTTTCGCTCGAATCGAACCTTAGTCGAAGGTTCTCACCCTTCCCCGATGAGTGCAAACTTTCACAATCTCACCGAAGTTACCACATCGCTGTGGTGAATTAtggtgg                                                                                                                                                                      >  1:244985/2‑124 (MQ=255)                                                                                                                                                                                                                           cAACGTTCTCTCGCTTTCGCTCGAATCGAACCTTAGTCGAAGGTTCTCACCCTTCCCCGATGAGTGCAAACTTTCACAATCTCACCGAAGTTACCACATCGCTGTGGTGAATTATGGTGGTggg                                                                                                                                                                  <  2:244980/124‑1 (MQ=255)                                                                                                                                                                                                                              cGTTCTCTCGCTTTCGCTCGAATCGAACCTTAGTCGAAGGTTCTCACCCTTCCCCGATGAGTGCAAACTTTCACAATCTCACCGAAGTTACCACATCGCTGTGGTGAATTAt                                                                                                                                                                           >  2:344987/1‑112 (MQ=255)                                                                                                                                                                                                                              cGTTCTCTCGCTTTCGCTCGAATCGAACCTTAGTCGAAGGTTCTCACCCTTCCCCGATGAGTGCAAACTTTCACAATCTCACCGAAGTTACCACATCGCTGTGGTGAATTATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCACGGGGTAATGCTTTTTACTGGCCTGCTCCCTTATCGGGAAGCGGGGCGCATCATATCAAATGACGCGGCGCTGTAAAg        >  1:182612/1‑275 (MQ=255)                                                                                                                                                                                                                                ttCTCTCGCTTTCGCTCGAATCGAACCTTAGTCGAAGGTTCTCACCCTTCCCCGATGAGTGCAAACTTTCACAATCTCACCGAAGtt                                                                                                                                                                                                  >  2:459850/1‑87 (MQ=255)                                                                                                                                                                                                                                  ctctcGCTTTCGCTCGAATCGAACCTTAGTCGAAGGTTCTCACCCTTCCCCGATGAGTGCAAACTTTCACAATCTCACCGAAGTTACCACATCGCTGTGGTGAATTAtggtg                                                                                                                                                                       <  1:344993/112‑1 (MQ=255)                                                                                                                                                                                                                                    ctcGCTTTCGCTCGAATCGAACCTTAGTCGAAGGTTCTCACCCTTCCCCGATGAGTGCAAACTTTCACAATCTCACCGAAGTTACca                                                                                                                                                                                              <  1:459857/87‑1 (MQ=255)                                                                                                                                                                                                                                    ctcGCTTTCGCTCGAATCGAACCTTAGTCGAAGGTTCTCACCCTTCCCCGATGAGTGCAAACTTTCACAATCTCACCGAAGTTACCACATCGCTGTGGTGAATTATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACTGCAGATNTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCACGGGGTAATGCTTTTTACTGGCCTGCCCCCTTATCGGACAGCCGGGCGACTCCTATCAAATGACCCCCCGCTTTAAATGGTTAc  >  1:597148/1‑275 (MQ=37)                                                                                                                                                                                                                                     tcGCTTTCGCTCGAATCGAACCTTAGTCGAAGGTTCTCACCCTTCCCCGATGAGTGCAAACTTTCACAATCTCACCg                                                                                                                                                                                                       >  1:144161/1‑77 (MQ=255)                                                                                                                                                                                                                                         tttCGCTCGAATCGAACCTTAGTCGAAGGTTCTCACCCTTCCCCGATGAGTGCAAACTTTCACAATCTCACCGAAGt                                                                                                                                                                                                   <  2:144160/77‑1 (MQ=255)                                                                                                                                                                                                                                          ttCGCTCGAATCGAACCTTAGTCGAAGGTTCTCACCCTTCCCCGATGAGTGCAAACTTTCACAATCTCACCGAAGTTACCACATCGCTGTGGTGAATTAtggtg                                                                                                                                                                       >  2:196879/1‑104 (MQ=255)                                                                                                                                                                                                                                              cTCGAATCGAACCTTAGTCGAAGGTTCTCACCCTTCCCCGATGAGTGCAAACTTTCACAATCTCACCGAAGTTACCACATCGCTGTGGTGAATTAtggtggtgg                                                                                                                                                                   <  1:196882/104‑1 (MQ=255)                                                                                                                                                                                                                                                                             |                                                                                                                                                                                                                                          GCGGATTCGTTGGGAAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTAATGCTTGAGATGGTGGTGGGGGAAGGATTATTCGTCGCTTCGCTCCTCACCCTTCGGGCCGTTGCCTGTGGCAACGTTCTCTCGCTTTCGCTCGAATCGAACCTTAGTCGAAGGTTCTCACCCTTCCCCGATGAGTGCAAACTTTCACAATCTCACCGAAGTTACCACATCGCTGTGGTGAATTATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCACGGGGTAATGCTTTTTACTGGCCTGCTCCCTTATCGGGAAGCGGGGCGCATCATATCAAATGACGCGCCGCTGTAAAGTGTTAC  >  CP009273/1282662‑1283163

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.