New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP009273	2038723 =	15 (0.390)	8 (0.230)	7/290	NT	37.3%	coding (305/7077 nt)	yeeJ	putative adhesin
	?	CP009273	2038836 =	13 (0.370)					coding (418/7077 nt)	yeeJ	putative adhesin

TGACCGACAAATATTATGCGGGATGGGAATTAAACTACGCCGCTTAACTGCGGGTATCTGTCTGATAACTCAACTTGCGTTCCCTATGGCTGCGGCAGCACAAGGTGTGGTAAACGCCGCAACCCAACAACCAGTTCCTGCACAAATTGCCATTGCAAATGCCAATACGGTGCCCTACACCCTTGGAGCGTTGGAATCGGCCCAAAGCGTTGCCGAACGTTTCGGTATTTCGGTGGCTGAGTTACGCAAACTCAACCAGTTTCGTACGTTTGCTCGAGGTTTTGATAATGTCCGCCAGGGTGATGAACTGGATGTCCCGGCACAAGTTAGTGAAAAAAAATTAACCCCGCCGCCGGGTAATAGCAGTGACAACCTCGAGCAACAGATAGCCAGTACTT  >  CP009273/2038454‑2038851                                                                                                                                                                                                                                                                              |                                                                                                                                 gagtcagttcggtggagagtattctgactgaaaaatggattatcaggcgtttcataccacggatggagaaaatcgaactgggagttcttcaggctaaaatcttcatccacgcccagcgtgattcttgcggtaccgtagcggcttaaccagtctgtcatttcgcctgaagcctgagaagaggcccatccacgcgccatatttgccgcttgctcgctgttcatatcttcggcgagcagagacccgatttgctgtgaagtactggctatcttTTGCTc                                                                                                                             >  1:49186‑M1/270‑275 (MQ=255)                ctGCGGGATGGGTATTAAAGTACGCAGCTTAACTGCGGGTATCTGTCTGATAACTCAACTTGCGTGCCCTATGGCTGCGGAAGCACAAGGTGTGGTAAACGCCGCAACCCAACAACCAGTTCCTGCACAAATTGCCATTGCAAATGCCAATACGGTGCCCTACACCCTTGGAGCGTTGGAATCGGCCCAAAGCGTTGCCGAACGTTTCGGTATTTCGGTGGCTGAGTTACGCAAACTCAACCAGTTTCGTACGTTTGCTCGAGGTTTTGATAATg                                                                                                              <  1:204030/274‑1 (MQ=255)                                           cTTAACTGCGGGTATCTGTCTGATAACTCAACTTGCGTTCCCTATGGCTGCGGCAGCACAAGGTGTGGTAAACGCCGCAACCCAACAACCAGTTCCTGCACAAATTGCCATTGCAAATGCCAATACGGTGCCCTACACCCTTGGACCGTTGGAATCGGTCCAAAGCGTTGCCGAACGTTTAGGTATTTCGGTGACTGAGTTACGCAAACCCAACCAGTTTCGTACGTTTGCTCGAGGTATGGATAATGTACACCAGGTAGAGGAACTggctttac                                                                                   >  1:255274/1‑269 (MQ=255)                                               gcgtttcataccacggatggagaaaatcgaactgggagttcttcaggctaaaatcttcatccacgcccagcgtgattcttgcggtaccgaagcggcttaaccagtctgtcattgcgcctgaagcctgagaagaggcccatccacgcgccatatttgccgcttgctcgctgttcatatcttcggcgagcagagacccgatttgctgtgaagtactggctatctgTTGCTCGAGGTTTTGATaatggcc                                                                                                           <  2:318153‑M1/24‑4 (MQ=255)                                                   ttcataccacggatggagaaaatcgaactgggagttcttcaggctaaaatcttcatccacgcccagcgtgattcttgcggtaccgaagcggcttaaccagtctgtcattgcgcctgaagcctgagaagaggcccatccacgcgccatatttgccgcttgctcgctgttcatatcttcggcgagcagagacccgatttgctgtgaagtactggctatctgTTGCTCGAGGTTTTGATAATGTCCGCCa                                                                                                       >  1:318159‑M1/220‑247 (MQ=255)                                                                                                                    gccgcAACCCAACAACCAGTTCCTGCACAAATTGCCATTGCAAATGCCAATACGGTGCCCTACACCCTTGGAGCGTTGGAATCGGCCCAAAGCGTTGCCGAACGTTTCGGTATTTCGGTGGCTGAGTTACGCAAACTCAACCAGTTTCGTAAGTTTGCTCGAGGTTTTGATAATGTCCGCCAGGGTGATGAAATGGATGTCCAGGGACAAGTTAGTGAAAAAAAATTAACCCGGCCGCCGGGAAATAGAAGTGACAACCTAGAGCAACAGATAGc          >  2:171050/1‑275 (MQ=255)                                                                                                                        cAACCCAACAACCCGTTCCTGCACAAATTGCCATTGCAAATGCCAATACGGTTCCCTACACCCTGGGAGCGTTGGAATCGGCCCAAAGCGTGGCCGAACGTTTCGGTATTTCGGTGGCTGAGTTACGCAAACTCAACCAGTTTCGTACGTTTGCTCGAGGTTTTGATAATGTCCGCCAGGGTGATGAACTGGATGTCCCGGCACAAGTTAGTGAAAAAAAATTAACCCCGCCGCCGGGTAATAGCAGTGACAACCTCGAGCAACAGATAGCCAg       <  1:722055/274‑1 (MQ=255)                                                                                                                             caacacCCTGTTCCTTCACAAATTGCCATTGCAAATGCCAAGACGGTGCCCTACACCCTTGGAGCGTTGGAATCGGCCCAAAGCGTTGCCGAACGTTTCGGTATTTCGGTGGCTGAGTTACGCAAACTCAACCAGTTTCGTACGTTTGCTCGAGGTTTTGATAATGTCCGCCAGGGTGATGAACTGGATGTCCCGGCACAAGTTAGTGAAAAAAAATTAACCCCGCCGCCGGGTAATAGCAGTGACAACCTCGAGCAACAGATAGCCAGTACtt  <  1:171053/274‑1 (MQ=255)                                                                                                                                   ccAGTTCCTGCACAAATTGCCATTGCAAATGCCAATACGGTGCCCTACACCCTTGGAGCGTTGTAATCGGCCCAAAGCGTTGCCGACCGTTTCGGTCTTTCGGTGGCTGAGTTACGCAAACTCAACCAGTTTCGTCAGTTTGCTCGAGGTTTTGATAATGGCCGCCAg                                                                                                      >  2:629983/1‑168 (MQ=255)                                                                                                                                       ttCCTGCACAAATTGACATTGCAAAGGCCAAGACGGTGCCCTACACCCTTGGAGCGTTGGAATCGGCCCAAAGCGTTGCCGAACGTTTCGGTATTTCGGTGGCTGAGTTACGCAAACTCAACCAGTTTCGTACGTTTGCTCGAGGTTTTGATAATGTCCGCCAGGGtg                                                                                                  <  1:629992/168‑1 (MQ=255)                                                                                                                                                       cATTGCAAATGCCAATACGGTGCCCTACACCCTTGGAGCGTTGGAATCGGCCCAAAGCGTTGCCGAACGTTTCGGTATTTCGGTGGCTGAGTTACGCAAACTCAACCAGTTTCGTACGTTTGCTCGAGGTTTTGATAATTTCCGCCAGGGTGATGAAATGGATGTCCCGGGACAAGTTAGTGANAAAAAATTNACCCCCCCGCCGGGTAATAg                                     >  1:462854/1‑213 (MQ=255)                                                                                                                                                                           tGCCCTACACCCTTGGAGCGTTGGAATCGGCCCAAAGCGTTGCCGAACGTTTCGGTATTTCGGTGGCTGAGTTACGCAAACTCAACCAGTTTCGTACGTTTGCTCGAGGTTTTGATAATGTCCGCCAg                                                                                                      >  2:544260/1‑128 (MQ=255)                                                                                                                                                                           tGCCCTACACCCTTGGAGCGTTGGAATCGGCCCAAAGCGTTGCCGAACGTTTCGGTATTTCGGTGGCTGAGTTACGCAAACTCAACCAGTTTCGTACGTTTGCTCGAGGTTTTGATAATGTCCGCCAGGGTGATGAACTGGATGTCCCGGCACAAGTTAGTGAAAAAAAATTAACCCCGCCGCCGGGTaa                                        >  1:32397/1‑190 (MQ=255)                                                                                                                                                                               ttACACCCTTGGAGCGTGGGAAGCGGCCCAAAGCGTTGCCGAACGTTTCGGTATTTCGGTGGCTGAGTTACGCAAACTCAACCAGTTTCGTACGTTGGCTCGAGGTTTTGATAATGTCCGCCAGGGTGATGAACTGGATGTCCCGGCACAAGTTAGTGAAAAAAAATTAACCCCGCCGCCGGGTAATAGc                                    <  1:456736/189‑1 (MQ=255)                                                                                                                                                                               cTACACCCTTGGAGCGTTGGAATCGGCCCAAAGCGTTGCCGAACGTTTCGGTATTTCGGTGGCTGAGTTACGCAAACTCAACCAGTTTCGTACGTTTGCTCGAGGTTTTGATAATGTCCGCCAGGGtg                                                                                                  <  1:544269/128‑1 (MQ=255)                                                                                                                                                                               cTACACCCTTGGAGCGTTGGAATCGGCCCAAAGCGTTGCCGAACGTTTCGGTATTTCGGTGGCTGAGTTACGCAAACTCAACCAGTTTCGTACGTTTGCTCGAGGTTTTGATAATGTCCGCCAGGGTGATGAACTGGATGTCCCGGCACAAGTTAGTGAAAAAAAATTAACCCCGCCGCCGGGTAATAGc                                    <  2:32397/190‑1 (MQ=255)                                                                                                                                                                                               ttGGAATCGGCCCAAAGCGTTGCCGAACGTTTCGGTATTTCGGTGGCTGAGTTACGCAAACTCAACCAGTTTCGTACGTTTGCTCGAGGTTTTGATAATGTCCGCCAGGGTGATGAACTGGATGTCCCGGCACAAGTTAGTGAAAAAAAATTAACCCCGCCGCCGGGTAATAGCAGTGACAACCTCGAGCAACa                >  2:423403/1‑194 (MQ=255)                                                                                                                                                                                                   aaTCGGCCCAAAGCGTTGCCGAACGTTTCGGTATTTCGGTGGCTGAGTTACGCAAACTCAACCAGTTTCGTACGTTTGCTCGAGGTTTTGATAATGTCCGCCAGGGTGATGAACTGGATGTCCCGGCACAAGTTAGTGAAAAAAAATTAACCCCGCCGCCGGGTAATAGCAGTGACAACCTCGAGCAACAGATa            <  1:423410/194‑1 (MQ=255)                                                                                                                                                                                                                                   cggcgagcagagacccgatttgctgtgaagtactggctatctgTTGCTCGAGGTTTTGATAATGTCCGCCAGGGtg                                                                                                  <  1:230058‑M1/33‑1 (MQ=255)                                                                                                                                                                                                                                   cggcgagcagagacccgatttgctgtgaagtactggctatctgTTGCTCGAGGTTTTGATAATGTCCGCCAGGGTGATGAACTGGATGTCCCGGCACAAGTTAGTg                                                                    <  1:226735‑M1/63‑1 (MQ=255)                                                                                                                                                                                                                                       gagcagagacccgatttgctgtgaagtactggctatctgTTGCTCGAGGTTTTGATAATGTCCGCCAGGGtgatga                                                                                              >  2:230053‑M1/40‑76 (MQ=255)                                                                                                                                                                                                                                       gagcagagacccgatttgctgtgaagtactggctatctgTTGCTCGAGGTTTTGATAATGTCCGCCAGGGTGATGAACTGGATGTCCCGGCACAAGTTAGTGaaaa                                                                >  2:226730‑M1/40‑106 (MQ=255)                                                                                                                                                                                                                                                    atttgctgtgaagtactggctatctgTTGCTCGAGGTTTTGATAATGTCCGCCAGGGTGATGAACTGGATGTCCCGGCACAAGTTAGTGAAAAAAAATTAACCCCGCCGCCGGGt                                          <  2:149170‑M1/89‑1 (MQ=255)                                                                                                                                                                                                                                                        gctgtgaagtactggctatctgTTGCTCGAGGTTTTGATAATGTCCGCCAGGGTGATGAACTGGATGTCCCGGCACAAGTTAGTGAAAAAAAATTAACCCCGCCGCCGGGTAATa                                      >  1:149171‑M1/23‑115 (MQ=255)                                                                                                                                                                                                                                                                              TTGCTCGAGGTTTTGATAATGTCCGCCAGGGTGATGAACTGGATGTCACGGCACAAGTTAGTGAAAAAAAATTAACCCCGCCGCCGGGTAATAGCAGTGACAACCTc                        <  1:675144‑M1/107‑1 (MQ=255)                                                                                                                                                                                                                                                                              |                                                                                                                                 TGACCGACAAATATTATGCGGGATGGGAATTAAACTACGCCGCTTAACTGCGGGTATCTGTCTGATAACTCAACTTGCGTTCCCTATGGCTGCGGCAGCACAAGGTGTGGTAAACGCCGCAACCCAACAACCAGTTCCTGCACAAATTGCCATTGCAAATGCCAATACGGTGCCCTACACCCTTGGAGCGTTGGAATCGGCCCAAAGCGTTGCCGAACGTTTCGGTATTTCGGTGGCTGAGTTACGCAAACTCAACCAGTTTCGTACGTTTGCTCGAGGTTTTGATAATGTCCGCCAGGGTGATGAACTGGATGTCCCGGCACAAGTTAGTGAAAAAAAATTAACCCCGCCGCCGGGTAATAGCAGTGACAACCTCGAGCAACAGATAGCCAGTACTT  >  CP009273/2038454‑2038851

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.