New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP009273	2676758 =	46 (1.200)	4 (0.110)	4/302	NT	9.4%	coding (537/1194 nt)	yphH	putative DNA‑binding transcriptional regulator
	?	CP009273	2677317 =	33 (0.890)					coding (1096/1194 nt)	yphH	putative DNA‑binding transcriptional regulator

TGTCAGGTTGCTAATGCTTGTTTAAGTCCGAAAGGTGAATTTGAGTATTTACAGATTGATGCACCGACGCCGCAGGCGCTGCTGTCCGAAATCGAAAAATGCTGGCATCGCCACCGTAAATTGTGGCCGGACCATACCATCAACCTGGCGTTGGCAATCCACGGTCAGGTTGATCCTGTGACCGGCGTGTCGCAAACCATGCCGCAAGCGCCGTGGACAACGCCGGTGGAGGTGAAATATCTGCTGGAAGAGAAGCTCGGCATTCGGGTGATGGTCGATAATGACTGCGTGATGCTGGCGCTGGCGGAGAAATGGCAAAATAATTCGCAGGAACGGGATTTCTGCGTGATCAACGTTGATTACGGCATTGGCTCGTCGTTCGTGATTAACGAGCAAATTTATCGCGGCAGTTTGTATGGTAGCGGACAGATTGGTCACACCATCGTTAATCCGGATGGCGTCGTCTGCGACTGTGGACGTTATGGCTGCCTGGAAACTGTCGCCTCGTTAAGCGCATTA  >  CP009273/2676504‑2677022                                                                                                                                                                                                                                                               |                                                                                                                                                                                                                                                                         tgtCAGGTTGCTAATGCTTGTTTAAGTCCGAAAGGTGAATTTGAGTATTTACAGATTGATGCACCGACGCCGCAGGCGCTGCTGTCCGAAATCGAAAAATGCTGGCATCGCCACCGTAAATTGTGGCCGGACCATACCATCAACCTGGCGTTGGCAATCCACGGTCAGGTTGATCCTGTGACCGGCGTGTCGCAAACCATGCCGCAAGCGGCGTGGACAACGCCGGTGGAGGGGAAGTAGCTGCGGGAAGAGAAGCACGGCATTCGGGCGACgga                                                                                                                                                                                                                                                      >  2:112519/1‑274 (MQ=255)   tCAGGTTGCTAATGCTTGTTTAAGTCCGAAAGGTGAATTTGAGTATTTACAGATTGATGCACCGACGCCGCAGGCGCTGCTGTCCGAAATCGAAAAATGCTGGCATCGCCACCGTAAATTGTGGCCGGACCATACCATCAACCTGGCGTTGGCAATCCACGGTCAGGTTGATCCTGTGACCGGCGTGTCGCAAACCATGCCGCAAGCGCCGTGGACAACGCCGGTGGCTGTGAAATATCTGCTGGACGAGACGCTCGGCCTGCGGGTggttggtg                                                                                                                                                                                                                                                    >  2:236746/1‑268 (MQ=255)           cTAATGCTTGTTTAAGTCCGAAAGGTGAATTTGAGTATTTACAGATTGATGCACCGACGCCGCAGGCGCTGCTGTCCGAAATCGAAAAATGCTGGCATCGCCACCGTAAATTGTGGCCGGACCATACCATCAACCTGGCGTTGGCAATCCACGGTCAGGTTGATCCTGTGACCGGCGTGTCGCAAACCATGCCGCAAGCGCCGTGGACACCGCCGGGGGAGGGGAAAGACGTGCTGGAAGAGAAGACCGGCATTGGGGGGATGGTGGGTAAGGAc                                                                                                                                                                                                                                            >  2:248017/1‑275 (MQ=255)                          gaaggAAAGGGGATTGTGATTATTGAGAGATTGATTCACCGAAGACGCAGGCGGTGCTGTCCGAAAACGAAAAATGCGGGCATAGCCACCGGAAATTGGGGCCGGAACATACCATCAGCCTGGCGTTGGCAATCCACGGTCAGGTTGATCCTGTGACCGGCGTGTCGCAAACCATGCCGCAAGCGCCGTGGACAACGCCGGTGGAGGTGAAATATCTGCTGGAAGAGAAGCTCGGCATTCGGGTGATGGTCGATAATGACTGCGTGATgctggcg                                                                                                                                                                                                                             <  2:393645/271‑1 (MQ=255)                          gTCCGAAAGGTGAATTTGAGTATTTACAGATTGATGCACCGACGCCGCAGGCGCTGCTGTCCGAAATCGAAAAATGCTGGCATCGCCACCGTAAATTGTGGCCGGACCATACCATCAACCTGGCGTTGGCAATCCACGGTCAGGTTGATCCTGTGACCGGCGTGTCGCAAACCATGCCGCAAGCGCCGTGGACAACGCCGGTGGAGGTGAAATATCTGCTGGAAGAGAAGCTCGGCATTCGGGTGATGGTCGATAATGACTGCGTGATgctggcg                                                                                                                                                                                                                             <  1:236751/275‑1 (MQ=255)                                     gAATTTGAGTATTTACAGATTGATGCACCGACGCCGCAGGCGCTGCTGTCCGAAATCGAAAAATGCTGGCATCGCCACCGTANATTGTGGCNGGACCATACCATCAACCTGGCGTTGGCAATCCACGGTCAGGTTGATCCTGTGACCGGCGTGTCGCAAACCATGCCGCAAGCGCCGTGGACAACGCCGGTGGAGGTGAAATATCTGCTGGAAGAGAAGCTCGGCATTCGGGTGATGGTCGATAATGACTGCGTGATGCTGGCGCTGGCGGAGaa                                                                                                                                                                                                                  <  1:470922/275‑1 (MQ=255)                                         caaattcaatatattgcaatctccgtgtaggcctgataagcgtagcgcatcaggcaatttttcgtttatgatcatcaaggcttccttcgggaagcctttctacgttatcgcgccatcaaatctgtcgtaactgcgcctcaacatacaaatagccaattcccagcacctgttgtgcgcggcttaattgcccaaagctaatttgcgtcgctttcacGCTCGGCATTCGGGTGATGGTCGATAATGACTGCGTGATGCTGGCGCTGGCGGAGAAATgg                                                                                                                                                                                                              <  1:711299‑M1/61‑1 (MQ=255)                                                  tACAGATTGATGCACCGACGCCGCAGGCGCTGCTGTCCGAAATCGAAAAATGCTGGCATCGCCACCGTAAATTGTGGCCGGACCATACCATCAACCTGGCGTTGGCAATCCACGGTCAGGTTGATCCTGTGACCGGCGTGTCGCAAACCATGCCGCAAGCGCCGTGGACAACGCCGGTGGAGGTGAAATATCTGCTGGAAGAGAAGCTCGGCATTAGGGTGATGGTCGATAATGACTGCGTGATGCTGGCGCGGGTGGAGAAATGGAAAaataat                                                                                                                                                                                                     >  1:336512/1‑275 (MQ=255)                                                        ttGATGCACCGACGCCGCAGGCGCTGCTGTCCGAAATCGAAAAATGCTGGCATCGCCACCGTAAATTGTGGCCGGACCATACCATCAACCTGGCGTTGGCAATCCACGGTCAGGTTGATCCTGTGACCGGCGTGTCGCAAACCATGCCGCAAGCGCCGTGGACAACGCCGGTGGAGGTGAAATATCTGCTGGAAGAGAAGCTCGGCATTCGGGTGATGGTCGATAATGACTGCGTGATGCTGGCGCTGGCGGAGAAATGGCAAAATAATTCgaa                                                                                                                                                                                                >  1:297859/1‑272 (MQ=255)                                                           atctccgtgtaggcctgataagcgtagcgcatcaggcaatttttcgtttatgatcatcaaggcttccttcgggaagcctttctacgttatcgcgccatcaaatctgtcgtaactgcgcctcaacatacaaatagccaattcccagcacctgttgtgcgcggcttaattgcccaaagccaatttgcgtcgctttcacGCt                                                                                                                                                                                                                                                                        >  1:554758‑M1/197‑199 (MQ=255)                                                           atctccgtgtaggcctgataagcgtagcgcatcaggcaatttttcgtttatgatcatcaaggcttccttcgggaagcctttctacgttatcgcgccatcaaatctgtcgtaactgcgcctcaacatacaaatagccaattcccagcacctgttgtgcgcggcttaattgcccaaagccaatttgcggcgcttgcacg                                                                                                                                                                                                                                                                          >  1:722031‑M1/197‑197 (MQ=255)                                                            tGCACCGACGCCGCAGGCGCTGCTGGCCGAAATCGAAAAATGCTGGCATCGCCACCGTAAATTGTGGCCGGACCATACCATCACCCTGGCGTTGGCAATCCACGGTCAGGTTGATCCTGTGACCGGCGTGTCGCAAACCATGCCGCAAGCGCCGTGGACAACGCCGGTGGAGGTGAAATATCTGCTGGAAGAGAAGCTCGGCATTCGGGTGATGGTCGATAATGACTGCGTGATGCTGGCGCTGGCGGAGAAATGGCAAAATAATTCGCAGGaa                                                                                                                                                                                            <  1:218149/274‑1 (MQ=255)                                                                   aCGCCGCAGGCGCTGCTGTCCGAAATCGAAAAATGCTGGCATCGCCACCGTAAATTGTGGCCGGACCATACCATCAACCTGGCGTTGGCAATCCACGGTCAGGTTGATCCTGTGACCGGCGTGTCGCAAACCATGCCGCAAGCGCCGTGGACAACGCCGGTGGAGGTGAAATATCTGCGGGAAGAGAAGCTCGGCAATCGGGTGATGGTCGATAATGACTGCGTGATGCTGGCGCTGGCGGAGAAATGGCAAAATAATTCGCAGGAACGGGAatt                                                                                                                                                                                    >  1:31789/1‑275 (MQ=255)                                                                      ccgcAGGCGCTGCTGTCCGAAATCGAAAAATGCTGGCATCGCCACCGTAAATTGTGGCCGGACCATACCATCAACCTGGCGTTGGCAATCCACGGTCATGTTGATCCTGTGACCGGCGTGTCGCAAACCATGCCGCAAGCGCCGTGGACAACGCCGGTGGAGGTGAAATATCTGCTGGAAGAGAAGCTCGGCATTCGGGTGATGGTCGATAATGACTGCGTGATGCTGGCGCTGGCGGAGAAATGGCAAAATAATTCGCAGGAACGGGAttt                                                                                                                                                                                    <  1:352537/272‑1 (MQ=255)                                                                                                     gCTGGCATCGCCACCGTAAATTGTGGCCGGACCATACCATCAACCTGGCGTTGGCAATCCACGGTCAGGTTGATCCTGTGACCTGCGTGTCGCAAACCATGCCGCAAGCGCCGTGGACAACGCCGGTGGAGGTGAAATATCTGCTGGAAGAGAAGCTCGGCATTCGGGTGATGGTCGATAATGACTGCGTGATGCTGGCGCTGGCGGAGAAATGGCAAAATAATTCGCAGGAACGGGATTTCTGCGTGATCAACGTTGATTACGGCATTGGCtcg                                                                                                                                                  <  1:248022/275‑1 (MQ=255)                                                                                                       cgtttatgatcatcaaggcttccttcgggaagcctttctacgttatcgcgccatcaaatctgtcgtaactgcgcctcaacatacaaatagccaattcccagcacctgttgtgcgcggcttaattgcccaaagccaatttgcgtcgctttcacGCt                                                                                                                                                                                                                                                                        >  2:661170‑M1/153‑155 (MQ=255)                                                                                                        gtttatgatcatcaaggcttccttcgggaagcctttctacgttatcgcgccatcaaatctgtcgtaactgcgcctcaacatacaaatagccaattcccagcacctgttgtgcgcggcttaattgcccaaagccaatttgcgtcgctttcacGCTCGGCATTCTGGTGATGGTCGATAATGACTGCGTGATGCTGGCGCTGGAGGAGAAATGGCAAAATAATTCGTAGAAACGGGATTTCTGCGTGATCAAc                                                                                                                                                                       <  2:155236‑M1/100‑1 (MQ=255)                                                                                                            atgatcatcaaggcttccttcgggaagcctttctacgttatcgcgccatcaaatctgtcgtaactgcgcctcaacatacaaatagccaattcccagcacctgttgtgcgcggcttaattgcccaaagccaatttgcgtcgctttcacGCTCGGCATTCGGGTGATGGTCGATAATGACTGCGTGATGCTGGCGCTGGCGGAGAAATGGCAAAATAATTCGCAGGAACGGGATTTCTGCGTGATCAACGTTg                                                                                                                                                                   >  1:155239‑M1/148‑251 (MQ=255)                                                                                                                                      aaaaacttaaCCTTGCGTGGGCCATCCCCGGGCCGGTTGTTCCTGTGACCGGCGTGTCGCAAACCATGCCGCAAGCGCCGTGGACAACGCCGGTGGAGGTGAAATATCTGCTGGAAGAGAAGCTCGGCATTCGGGTGATGGTCGATAATGACTGCGTGATGCTGGCGCTGGCGGAGAAATGGCAAAATAATTCGCAGGAACGGGATTTCTGCGTGATCAACGTTGATTACGGCATTGGCTCGTCGTTCGTGATTAACGAGCAAATTTATCGCGGc                                                                                                                 <  2:607178/267‑1 (MQ=255)                                                                                                                                        atttctccgttatcgcgccctccaatctgtcgtaactgcgcctcaacatacaaatagccaattcccagcacctgttgtgcgcggcttaattgcccaaagccaatttgcgtcgctttcacGCTCGGCATTCGGGTGATGGTCGATAATGACTGCGTGATGCTGGCGCTGGCGGAGAAATGGCAAAATAATTCGCAGGAACGGGATTTCTGCGTGATCAACGTTGATTACGGCATTGGCTCGTCGTTCGTGATTAACGAGCAAATTTATCGCGGCa                                                                                                                >  2:711289‑M1/120‑274 (MQ=255)                                                                                                                                             cAACCTGGCGGTGGCAATCCACGGTCAGGTTGATCCTGTGACCGGCGTGTCGCAAACCATGCCGCAAGCGCCGTGGACAACGCCGGTGGAGGTGAAATATCTGCTGGAAGAGAAGCTCGGCATTCGGGTGATGGTCGATAATGACTGCGTGATGCTGGCGCTGGCGGAGAAATGGCAAAATAAtt                                                                                                                                                                                                    >  1:698838/1‑185 (MQ=255)                                                                                                                                               aCCTGGCGTTGGCAATCCACGGTCAGGTTGATCCTGTGACCGGCGTGTCGCAAACCATGCCGCAAGCGCCGTGGACAACGCCGGTGGAGGTGAAATATCTGCTGGAAGAGAAGCTCGGCATTCGGGTGATGGTCGATAATGACTGCGTGa                                                                                                                                                                                                                                     >  1:247661/1‑150 (MQ=255)                                                                                                                                                  tGGCGTTGGCAATCCACGGTCAGGTTGATCCTGTGACCGGCGTGTCGCAAACCATGCCGCAAGCGCCGTGGACAACGCCGGTGGAGGTGAAATATCTGCTGGAAGAGAAGCGCGGCATTCGGGTGATGGTCGATAATGACTGCGTGATGCTGGCGCTGGCGGAGAAATGGCAAAATAATTCGCAGGAACGGGATTTCTGCGTGATCAACGTTGATTAGGGCATTGGCTCGTCGTTCGTGATTAACGAGCAAATTTATCGCGGCAGTTTGTAGGGt                                                                                                     >  1:70694/1‑275 (MQ=255)                                                                                                                                                   ggCGTTGGCAATCCACGGTCAGGTTGATCCTGTGACCGGCGTGTCGCAAACCATGCCGCAAGCGCCGTGGACAACGCCGGTGGAGGTGAAATATCTGCTGGAAGAGAAGCTCGGCATTCGGGTGATGGTCGATAATGACTGCGTGATgct                                                                                                                                                                                                                                 <  2:247656/150‑1 (MQ=255)                                                                                                                                                     cGTTGGCAATCCACGGTCAGGTTGATCCTGTGACCGGCGTGTCGCAAACCATGCCGCAAGCGCCGTGGACAACGCCGGTGGAGGTGAAATATCTGCTGGAAGAGAAGCTCGGCATTCGGGTg                                                                                                                                                                                                                                                           >  2:543517/1‑122 (MQ=255)                                                                                                                                                         ggCAATCCACGGTCAGGTTGATCCTGTGACCGGCGTGTCGCAAACCATGCCGCAAGCGCCGTGGACAACGCCGGTGGAGGTGAAATATCTGCTGGAAGAGAAGCTCGGCATTCGGGTGATgg                                                                                                                                                                                                                                                       <  1:543526/122‑1 (MQ=255)                                                                                                                                                             aTCCACGGTCAGGTTGATCCTGTGACCGGCGTGTCGCAAACCATGCCGCAAGCGCCGTGGACAACGCCGGTGGAGGTGAAATATCTGCTGGAAGAGAAGCt                                                                                                                                                                                                                                                                        <  1:180600/101‑1 (MQ=255)                                                                                                                                                                               ccTGTGACCGGCGTGTCGCAAACCATGCCGCAAGCGCCGTGGACAACGCCGGTGGAGGTGAAATATCTGCTGGAAGAGAAGCTCGGCATTCGGGTGATGGTCGATAATGACTGCGTGATGCTGGCGCTGGCGGAGAAATGGCAAAATAATTCGCAGGAACGGGATTTCTGCGTGATCAACGTTGATTACGGCATTg                                                                                                                                                       >  1:11952/1‑196 (MQ=255)                                                                                                                                                                               ccTGTGACCGGCGTGTCGCAAACCATGCCGCAAGCGCCGTGGACAACGCCGGTGGAGGTGAAATATCTGCTGGAAGAGAAGCTCGGCATTCGGGTGATGGTCGATAATGACTGCGTGATGCTGGCGCTGGCGGAGAAATGGCAAAATAATTCGCAGGAACGGGATTTCTGCGTGATCAACGTTGATTACGGCATTGGCTCGTCGTTCGTGATTAACGAGCAAATTTATCGCGGCAGtt                                                                                                             >  2:648466/1‑238 (MQ=255)                                                                                                                                                                                 tgtgACCGGCGTGTCGCAAACCATGCCGCAAGCGCCGTGGACAACGCCGGTGGAGGTGAAATATCTGCTGGAAGAGAAGCTCGGCATTCGGGTGATGGTCGATa                                                                                                                                                                                                                                                 >  2:671208/1‑104 (MQ=255)                                                                                                                                                                                 tgtgACCGGCGTGTCGCAAACCATGCCGAAAGCGCCGTGGACACGGCCGGTGGAGGTGAAATATCTGCTGGAAGAGAAGCTCGGCATTCGGGTGCTGGTCGATAATGACTGCGTGATGCTGGCGCTGGCGGAGAAATGGCAAAATAATTCGCAGGAACGGGATTGCTGCGTGATCAACGTTGANTACGGCATTGGCTCGTCGTTCGTGATTAACGAGCAAATTTATAGCGGCAGTTTGTATGGTAAAGGCCAGATTGGTCAAACCAACGTTaa                                                                        >  1:531999/1‑273 (MQ=255)                                                                                                                                                                                   tgACCGGCGTGTCGCAAACCATGCCGCAAGCGCCGTGGACAACGCCGGTGGAGGTGAAATATCTGCTGGAAGAGAAGCTCGGCATTCGGGTGATGGTCGATAATGACTGCGTGATGCTGGCGCTGGCGGAGAAATGGCAAAATAATTCGCAGGAACGGGATTTCTGCg                                                                                                                                                                               >  2:116453/1‑168 (MQ=255)                                                                                                                                                                                   tgACCGGCGTGTCGCAAACCATGCCGCAAGCGCCGTGGACAACGCCGGTGGAGGTGAAATATCTGCTGGAAGAGAAGCTCGGCATTCGGGTGATGGTCGATAATGACTGCGTGATGCTGGCGCTGGCGGAGAAATGGCAAAATAATTCGCAGGAACGGGATTTCTGCGTGATCAACGTTGATTACGGCATTGGCtc                                                                                                                                                   <  2:11952/196‑1 (MQ=255)                                                                                                                                                                                   tgACCGGCGTGTCGCAAACCATGCCGCAAGCGCCGTGGACAACGCCGGTGGAGGTGAAATATCTGCTGGAAGAGAAGCTCGGCATTCGGGGGATGGTCGATAATGACTGCGTGATGCTGGCGCTGGCGGAGAAATGGCAAAATAATTCGCAGGAACGGGATTTCTGCGTGATCAACGTTGATTACGGCATTGGCTCGTCGTTCGTGATTAACGAGCAAATTTATCGCGGCAGTTTGTa                                                                                                         <  1:648475/238‑1 (MQ=255)                                                                                                                                                                                     aCCGGCGTGTCGCAAACCATGCCGCAAGCGCCGTGGACAACGCCGGTGGAGGTGAAATATCTGCTGGAAGAGAAGCTCGGCATTCGGGTGATGGTCGATAATGa                                                                                                                                                                                                                                             <  1:671217/104‑1 (MQ=255)                                                                                                                                                                                       cGGCGTGTCGCAAACCATGCCGCAAGCGCCGTGGACAACGCCGGTGGAGGTGAAATATCTGCTGGAAGAGAAGCTCGGCATTCGGGTGATGGTCGATAATGACTGCGTGATGCTGGCGCTGGCGGAGAAATGGCAAAATAATTCGCAGGAACGGGATTTCTGCGTGAt                                                                                                                                                                           <  1:116454/168‑1 (MQ=255)                                                                                                                                                                                         gCGTGTCGCAAACCATGCCGCAAGCGCCGTGGACAACGCCGGTGGAGGTGAAATATCTGCTGGAAGAGAAGCTCGGCATTCGGGTGATGGTCGATAATGACTGCGTGATGCTGGCGCTGGCGGAGAAATGGCAAAATAATTCGCAGGAACGGGATTTCTGCg                                                                                                                                                                               >  1:654726/1‑162 (MQ=255)                                                                                                                                                                                         gCGTGTCGCAAACCATGCCGCAAGCGCCGTGGACAACGCCGGTGGAGGTGAAATATCTGCTGGAAGAGAAGCTCGGCATTCGGGTGATGGGCGATAATGACTGCGTGATGCTGGCGCTGGCGGAGAAATGGCAAAATAATTCGCAGGAACGGGATTTCTGCGTGATCAACGTTg                                                                                                                                                                   >  2:129818/1‑174 (MQ=255)                                                                                                                                                                                             gtCGCAAACCATGCCGCAAGCGCCGTGGACAACGCCGGTGGAGGTGAAATATCTGCTGGAAGAGAAGCTCGGCATTCGGGTGATGGTCGATAATGACTGCGTGATGCTGGCGCTGGCGGAGAAATGGCAAAATAATTCGCAGGAACGGGATTTCTGCGTGAt                                                                                                                                                                           <  2:654717/162‑1 (MQ=255)                                                                                                                                                                                             gtCGCAAACCATGCCGCAAGCGCCGTGGACAACGCCGGTGGAGGTGAAATATCTGCTGGAAGAGAAGCTCGGCATTCGGGTGATGGTCGATAATGACTGCGTGATGCTGGCGCTGGCGGAGAAATGGCAAAATAATTCGCAGGAACGGGATTTCTGCGTGATCAACGTTGATTa                                                                                                                                                               <  1:129819/174‑1 (MQ=255)                                                                                                                                                                                                  aaaCCGTGGCGAAAGCGCCGTGGAGATGGCCGGGGGAGGTGAAATATGTGCTGGAAGAGAAGTTCGGCATTCGGGTGATGGTCGATAATGACTGCGTGATGCTGGCGCTCGCGGAGAAATGGCAAAATAATTCGCAGGAACGGGATTTCTGCGTGATCAACGTTGATTACGGCATTGGCTCGTCGTTCGTGATTAACGAGCAAATTTATCGCGGCAGTTTGTATGGTAGCGGACAGATTGGTCACACCATCGTTAATCCGGATGGCGTCGTCTg                                                      <  2:297853/274‑1 (MQ=255)                                                                                                                                                                                                   aaCCATGCCGCAAGCTCCGTGGATTACGACGGTGGAGGAGAAATATCTGCTGGAAGAGAAGCTCgg                                                                                                                                                                                                                                                                     >  1:500384/1‑66 (MQ=255)                                                                                                                                                                                                       aTGCCGCAAGCGCCGTGGACAACGCCGGTGGAGGTGAAATATCTGCTGGAAGAGAAGCTCGGCAtt                                                                                                                                                                                                                                                                 <  2:500377/66‑1 (MQ=255)                                                                                                                                                                                                        tGCCGCAAGCGCCGTGGACAACGCCGGTGGAGGTGAAATATCTGCTGGAAGAGAAGCTCGGCATTCGGGTGATGGTCGATAATGACTGCGTGATGCTGGCGCTGGCGGAGAAATGGCAAAATAATTCGCAGGAACGGGATTTCTGCGTGATCAACGTTGATTACGGCATTGGCTCGTCGTTCGTGATTAACGAGCAAATTTATCGCGGCAGTTTGTATGGTAGCGGACAGATTGGTCACACCATCGTTAATTCGGATGGCTTCTTCTGCGTCtg                                                >  2:639351/1‑274 (MQ=255)                                                                                                                                                                                                         gCCGCAAGCGCCGTGGACAACGCCGGTGGAGGTGAAATATCTGCTGGAAGAGAAGCTCGGCATTCGGGTGATGGTCGATAATGACTGCGTGATGCTGGCGCTGGCGGAGAAATGGCAAAATAATTCGCAGGAACGGGATTTCTGCGTGATCAACGTTGATTACGGCATTGGCTCGTCGTTCGTGAtt                                                                                                                                      >  2:49280/1‑187 (MQ=255)                                                                                                                                                                                                         gCCGCAAGCGCCGTGGACAACGCCGGTGGAGGTGAAATATCTGCTGGAAGAGAAGCTCGGCATTCGGGTGATGGTCGATAATGACTGCGTGATGCTGGCGCTGGCGGAGAAATGGCAAAATAATTCGCAGGAACGGGATTTCTGCGTGATCAACGTTGATTACGGCATTGGCTCGTCGTTCGTGATTAACGAGCAAATTTATCGCGGCAGtt                                                                                                             >  1:582342/1‑212 (MQ=255)                                                                                                                                                                                                             cAAGCGCCGTGGACAACGCCGGTGGAGGTGAAATATCTGCTGGAAGAGAAGCTCGGCATTCGGGTGATGGTCGATAATGACTGCGTGATGCTGGCGCTGGCGGAGAAATGGCAAAATAATTCGCAGGAACGGGATTTCTGCGTGATCAACGTTGATTACGGCATTGGCTCGTCGTTCGTGATTAACg                                                                                                                                  <  1:49280/187‑1 (MQ=255)                                                                                                                                                                                                             cAAGCGCCGTGGACAACGCCGGTGGAGGTGAAATATCTGCTGGAAGAGAAGCTCGGCATTCGGGTGATGGTCGATAATGACTGCGTGATGCTGGCGCTGGCGGAGAAATGGCAAAATAATTCGCAGGAACGGGATTTCTGCGTGATCAACGTTGATTACGGCATTGGCTCGTCGTTCGTGATTAACGAGCAAATTTATCGCGGCAGTTTGTa                                                                                                         <  2:582333/212‑1 (MQ=255)                                                                                                                                                                                                                      tGGACAACGCCGGTGGAGGTGAAATATCTGCTGGAAGAGAAGCTCGGCATTCGGGTGATGGTCGATAATGACTGCGTGATGCTGGCGCTGGCGGAGAAATGGCAAAATAATTCGCAGGAACGGGATTTCTGCGTGATCAACGTTGATTACGGCATTGGCTCGTCGTTCGTGATTAACGAGCAAATTTATCGCGGCACTTTGTATGGTAGCGGCAAGATGGGTCACACCATCGTTAATCCTGATGGCGTCGTGTGCGGCTGTGGACGTTAttnnnt                                 >  2:177136/1‑270 (MQ=255)                                                                                                                                                                                                                         aCAACGCCGGTGGAGGTGAAATATCTGCTGGAAGAGAAGCt                                                                                                                                                                                                                                                                        <  2:71252/41‑1 (MQ=255)                                                                                                                                                                                                                                  gTGGAGGTGAAATATCTGCTGGAAGAGAAGCTCGGCATTCGGGTGATAGTCGATAATGACTGCGTGATGCTGGCGCTGGCGGAGAAATGGCAAAATAATTCGCAGGAACGGGATTTCTGCGTGATCAACGTTGATTACGGCATTGGCTCGTCGTTCGTGATTAACGAGCAAATTTATCGCGGCAGTTTGTATGGTCGCGGACAGATTGGTCACACCATCGTTAATCCGGATGGCGTCGTCTGCGACTGTGGACGTTATGGCTACCTGGAAACTg                      >  1:692789/1‑274 (MQ=255)                                                                                                                                                                                                                                      gggggAAATAGTTGATGGAAGAGAAGCGGGGCATTCGGGTGATGGTTGAGAATGACTGCGGGATGCGGGCGCTGGCGGAGAAATGGCAAAATAATTCGCAGGAACGGGATTTCTGCGTGATCAACGTTGATTACGGCATTGGCTCGTCGTTCGTGATTAACGAGCAAATTTATCGCGGCAGTTTGTATGGTAGCGGACAGATTGGTCACACCATCGTTAATCCGGATGGCGTCGTCTGCGACTGTGGACGTTATGGCTGCCTGGAAACTGTCGc                  <  1:177139/270‑1 (MQ=255)                                                                                                                                                                                                                                                   gctgGAAGAGAAGCTCGGCATTCGGGTGATGGTCGATAATGACTGCGTGATGCTGGCGCTGGCGGAGAAATGGCAAAATAATTCGCAGGAACGGGATTTCTGCGTGAt                                                                                                                                                                           >  1:158392/1‑108 (MQ=255)                                                                                                                                                                                                                                                     tgGAAGAGAAGCTCGGCATTCGGGTGATGGTCGATAATGACTGCGTGTTGCTGGCGCTGGCGGAGAAATGGCAAAATAATTCGCAGGAACGGGATTTCTGCGTGATCAACGTTGATTACGGCATTGGCTCGTCGTTCGTGATTAACGAGCAAATTTATCGCGGCAGTTTGTATGGTAGCGGACAGATTGGTCACACCATCGTTAATCCGGATGGCGTCGTCTGCGACTGTGGGCGTTATGGCTGCCTGGAAACTGTCGCCTCGTTACGCCCATTa  >  2:648530/1‑275 (MQ=255)                                                                                                                                                                                                                                                       gAAGAGAAGCTCGGCATTCGGGTGATGGTCGATAATGACTGCGTGATGCTGGCGCTGGCGGAGAAATGGCAAAATAATTCGCAGGAACGGGATTTCTGCGTGATCAAc                                                                                                                                                                       <  2:158389/108‑1 (MQ=255)                                                                                                                                                                                                                                                              aGCTCGGCATTCGGGTGATGGTCGATAATGACTGCGTGATGCTGGCGCTGGCGGAGAAATGGCAAAATAATTCGCAGGAACGGGAttt                                                                                                                                                                                    >  2:55556/1‑88 (MQ=255)                                                                                                                                                                                                                                                               |                                                                                                                                                                                                                                                                         TGTCAGGTTGCTAATGCTTGTTTAAGTCCGAAAGGTGAATTTGAGTATTTACAGATTGATGCACCGACGCCGCAGGCGCTGCTGTCCGAAATCGAAAAATGCTGGCATCGCCACCGTAAATTGTGGCCGGACCATACCATCAACCTGGCGTTGGCAATCCACGGTCAGGTTGATCCTGTGACCGGCGTGTCGCAAACCATGCCGCAAGCGCCGTGGACAACGCCGGTGGAGGTGAAATATCTGCTGGAAGAGAAGCTCGGCATTCGGGTGATGGTCGATAATGACTGCGTGATGCTGGCGCTGGCGGAGAAATGGCAAAATAATTCGCAGGAACGGGATTTCTGCGTGATCAACGTTGATTACGGCATTGGCTCGTCGTTCGTGATTAACGAGCAAATTTATCGCGGCAGTTTGTATGGTAGCGGACAGATTGGTCACACCATCGTTAATCCGGATGGCGTCGTCTGCGACTGTGGACGTTATGGCTGCCTGGAAACTGTCGCCTCGTTAAGCGCATTA  >  CP009273/2676504‑2677022

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.