New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP009273	= 2895803	27 (0.700)	5 (0.140)	5/298	NT	16.5%	coding (549/1479 nt)	ygcE	putative kinase
	?	CP009273	= 2896198	25 (0.690)					coding (944/1479 nt)	ygcE	putative kinase

ATGGCACGCCTGCTGCGCCGTTGATTAGCTGGCAGGATGCACGCGTTACACGCCCTTACGAACACACTAACCCTGACGTGGCATATGTCACCTCTTTTTCGGGTTATCTGACGCATCGCTTAACCGGCGAGTTTAAAGACAATATCGCCAACTATTTTGGTCAGTGGCCGGTGGATTATAAGAGCTGGGCATGGAGCGAAGATGCTGCGGTAATGGATAAGTTTAATATCCCCCGTCATATGCTGTTTGATGTGCAAATGCCTGGCACCGTCCTCGGACATATCACACCACAAGCCGCACTGGCGACACATTTCCCGGCAGGACTGCCGGTTGTTTGTACCACCAGTGATAAACCGGTAGAAGCTCTGGGGGCCGGATTACTGGATGATGAAACGGCGGTAATTTCTCTTGGCACTTACATCGCATTGATGATGAACGGCAAAGCACTGCCGAAAGATCCAGTAGCGTACTGGCCGATTATGTCTTCTATTCCGCAAACATTGCTGTATGAAGGTTACGGTATTCGCAAAGGCATGTGGACGGTG  >  CP009273/2895532‑2896076                                                                                                                                                                                                                                                                                |                                                                                                                                                                                                                                                                                  aTGGCACGCCTGCTGCGCCGTTGATTAGCTGGCAGGATGCACGCGTTACACGCCCTTACGAACACACTAACCCTGACGTGGCATATGTCACCTCTTTTTCGGGTTATCTGACGCATCGCTTAACCGGCGAGTTTAAAGACAATATCGCCAACTATTTTGGTCAGTGGCCGGTGGATTATAAGAGCTGGGCATGGAGCGAAGATGCTGCGGTAATGGATAAGTTTAATATCCCCCGTCATATGCTGTTTGATGTGCAAATGCCTGGCACCGTCCt                                                                                                                                                                                                                                                                                 <  1:54678/274‑1 (MQ=255)                                                                                 gCATATGTCACCTCTTTTTCGGGTTATCTGACGCATCGCTTAACCGGCGAGTTTAAAGACAATATCGCCAACTATTTTGGTCAGTGGCCGGTGGATTATAAGAGCTGGGCATGGAGCGAAGATGCTGCGGTAATGGATAAGTTTAATATCACCCGTCATATGCTGTTTGATGTGCAAATGCCTGGCACCGTCCTCGGACATATCACACCACAAGCCGCACTGGCGACACATTTCCCGGCAGGACTGCCGGTTGTTTGTaccaccctggcactta                                                                                                                                                                                                 >  1:356861/1‑264 (MQ=255)                                                                                   cgatgtCACCGCTTTTGCGGGTGATCTGACGCATCTCTTAACCGGCGAGTTTAAAGACAATATCGCCAACTAGTTTGGTCAGTGGCCGGTGGATTATAAGAGCTGGGCATGGAGCGAAGATGCTGCGGTAATGGATAAGTTTAATATCCCCCGTCATATGCTGTTTGATGTGCAAATGCCTGGCACCGTCatcagaccattacagcctggcggcacacaagaagcttttttgttgagtaaatcttccggtgaaagatcctgcgccctggcatcct                                                                                                                                                                                              <  2:296396‑M1/273‑86 (MQ=255)                                                                                      tGTCACCTCTATTTCGGGTTATCTGACGCATCGCTTAACCGGCGAGTTTAAAGACAATATCGCCAACTATTTTGGTCAGTGGCCGGTGGATTATAAAATCTTGGCATGGAGCGAAGATGCTGCGGTAATGAATAAGCTTAATATCCCCCGTCATATGCTGTTTGCTGTGCAAATGCCTGGCACCGTCCTCGGACATATCACACCACAAGCCGCAATGGCGACACATTTCCCGGCAGGACTGCAGGTTGTTTGTACCAACAGTGATAAACCGGTAg                                                                                                                                                                                           >  1:700670/1‑275 (MQ=255)                                                                                         cACCTCTTTTTCGGGTTATCTGACGCATCGCTTAACCGGCGAGTTTAAAGACAATATCGCCAACTATTTTGGTCAGTGGCCGGTGGATTATAAGAGCTGGGCATGGAGCGAAGATGCTGCGGTAATGGATAAGTTTAATATCCCCCGTCATATGCTGTTTGATGTGCAAATGCCTGGCACCGTCatcagaccattacagcctggcggcacacaagaagcttttttgttgagtaaatcttccggtgaaagatcctgcgccctggca                                                                                                                                                                                                  >  1:296402‑M1/1‑184 (MQ=255)                                                                                           ccTCTTTTTCGGGTTATCTGACGCATCGCTTAACCGGCGAGTTTAAAGACAATATCGCCAACTATTTTGGTCAGTGGCCGGTGGATTATAAGAGCTGGGCATGGAGCGAAGATGCTGCGGTAATGGATAAGTTTAATATCCCCCGTCATATGNTGTTTGATGTGCAAATGCCTGGCACCGTCCTCGGACATATCACACCACAAGCCGCACTGGCGACACATTTCCCGGCAGGACTGCCGGTTGTTTGTACCACCAGTGATAAACCGGTAGAAGct                                                                                                                                                                                      >  1:600679/1‑275 (MQ=255)                                                                                                                               gCGAGTTTAAAGACAATATCGCCAACTATTTTGGTCAGTGGCCGGTGGATTATAAGAGCTGGGCATGGAGCGAAGATGCTGCGGTAATGGATAAGTTTAATATCCCCCGTCATATGCTGTTTGATGTGCAAATGCCTGGCACCGTCatcagaccattacagcctggcggcacacaagaagcttttttgttgagtaaatcttccggtgaaag                                                                                                                                                                                                                  >  1:1953‑M1/1‑146 (MQ=255)                                                                                                                               gCGAGTTTAAAGACAATATCGCCAACTATTTTGGTCAGTGGCCGGTGGATTATAAGAGCTGGGCATGGAGCGAAGATGCTGCGGTAATGGATAAGTTTAATATCCCCCGTCATATGCTGTTTGATGTGCAAATGCCTGGCACCGTCCTCGGACATATCACACCACAAGCCGCACTGGCGACACATTTCCCGGCAGGACTGCCGGTTGTTTGTACCACCAGTGATAAACCGGTAGAAGCTCTGGGGGCCGGATTACTGGATGATGAAAcggcgg                                                                                                                                                    >  1:6366/1‑273 (MQ=255)                                                                                                                                   gtgtaaaGACAATATCGTCAACTATTTTGGTCAGTGGCCGGTGGATTGTAAGAGCTGGGCATGGAGCGAAGATGCTGCGGTAATGGATAAGTTTAATATCCCCCGTCATATGCTGTTTGATGTGCAAATGCCTGGCACCGTCatcagaccattacagcctggcggcacacaagaagcttttttgttgagtaaatcttccggtgaaagatcc                                                                                                                                                                                                              <  2:1953‑M1/208‑70 (MQ=255)                                                                                                                                        aaGAAAATATGGAAAACTTTTTTGGTCAGTGGCCGGTGGATTATAAGAGCTGGGCATGGAGCGAAGATGCTGCGGTAATGGATAAGTTTAATATCCCCCGTCATATGCTGTTTGATGTGCAAATGCCTGGCACCGTCCTCGGACATATCACACCACAAGCCGCACTGGCGACACATTTCCCGGCAGGACTGCCGGTTGTTTGTACCACCAGTGATAAACCGGTAGAAGCTCTGGGGGCCGGATTACTGGATGATGAAACGGCGGTAATTTCTCtt                                                                                                                                         <  2:600670/275‑1 (MQ=255)                                                                                                                                                                   aGTGGCCGGTGGATTATAAGAGCTGGGCATGGAGCGAAGATGCTGCGGTAATGGATAAGTTTAATATCCCCCGTCATATGCTGTTTGATGTGCAAATGCCTGGCACCGTCCTCGGACATATCACACCACAAGCCGCACTGGCGACACATTTCCCGGCAGGACTGCCGGTTGTTTGTACCACAAGTGATAAACCGGTAGAAGCTCTGGGGGCCGGATTACTTGATGATGAAACGGCGGTAATTTCTATTGGCACTTACATCGCATtgatgatgac                                                                                                               >  1:428877/1‑273 (MQ=255)                                                                                                                                                                               aTTATAAGAGCTGGGCATGGAGCGAAGATGCTGCGGTAATGGATAAGTTTAATATCCCCCGTCATATGCTGTTTGATGTGCAAATGCCTGGCACCGTCatcagaccattacagcctggcggcacacaagaagcttttttgttgagtaaatcttccggtgaaagatcctgcgccctggcatcctcaattaacgacccgcctagcatgtcgcgcagcccgctcaccgtccacatgcctttgcgaataccgtaaccttcatacagcaatgtttgcgg                                                                                                   >  1:210186‑M1/1‑98 (MQ=255)                                                                                                                                                                                     gtataagggacaggAGCGAAGATGCTGCGGTAATGGATAAGTTTAATATCCCCCGTCATATGCTGTTTGATGTGCAAATGCCTGGCACCGTCCTCGGACATATCACACCACAAGCCGCACTGGCGACACATTTCCCGGCAGGACTGCCGGTTGTTTGTACCACCAGTGATAAACCGGTAGAAGCTCTGGGGGCCGGATTACTGGATGATGAAACGGCGGTAATTTCTCTTGGCACTTACATCGCATTGATGATGAACGGCAAAGCACTGCCGaa                                                                                             <  1:456989/262‑1 (MQ=255)                                                                                                                                                                                                   aGCGAAGATGCCGCGGTAATGGATAAGTTTAATATCCCCCGTCATATGCTGTTTGATGTGCAAATGCTTGGCACCGTCCTCGGACATATCACACCACAAGCCGCACTGGCGACACATTTCCCGGCAGGACTGACGGTTGTTTGTACCACCAGTGATAACCCGGTAGAAGCACTGGGGGCCGGAGTACTGGATGATGAAACGGCGGTAATTTCTCTTGGCACTTACATAGCATTGATCATGAACGACAAAGCACTTACGAAATAGCCAGTAGCga                                                                               >  1:443182/1‑273 (MQ=255)                                                                                                                                                                                                       ccattgctgcANTAATGGATAAGTTTCACATCCCCCGTTATTTGCTGTTTTATGTGCCATTGCCTGGTACCGTCCTCCGACATATCACACCATCAGCCGCACTGGCGACACAGTTCCCGGCAGTACTGCCGGTGGTTTGTACCACCAGTGATAAACCGGTAGAAGCTCTGGGGGCCGGATTACTGGATGATGAAACGGCGGTAATTTCTCTTTGCACTTACATCGCATTGATGATGAACGGCAAAGCACTGCCGAAAGATCCAGTAGCGTACTgg                                                                          <  2:62656/271‑1 (MQ=255)                                                                                                                                                                                                       aaGATGCTGCGGTAATGGATAAGTTTAATATCCCCCGTCATATGCTGTTTGATGTGCAAATGCCTGGCACCGTCCTCGGACATATCACACCACAAGCCGCACTGGCGACACATTTCCCGGCAGGACTGCCGGTTGTTTGTACCACCAGTGATAAACCGGTAGAAGCTCTGGGGGCCGGATTACTGGATGATGAAACGGCGGTAATTTCTCTTGGCACTTACATCGCATTGATGATGAACGGCAAAGCACTGCCGAAAGATc                                                                                        >  2:87676/1‑261 (MQ=255)                                                                                                                                                                                                       aaGATGCTGCGGTAATGGATAAGTTTAATATCCCCCGTCATATGCTGTTTGATGTGCAAATGCCTGGCACCGTCCTCGGACATATCACACCACAAGCCGCACTGGCGACACATTTCCCGGCAGGACTGCCGGTTGTTTGTACCACCAGTGATAAACCGGTAGAAGCTCTGGGGGCCGGATTACTGGATGATGAAACGGCGGTAATTTCTCTTGGCACTTACATCGCATTGATGATGAACGGCAAAGCACTGCCGAAAGATc                                                                                        <  1:87677/261‑1 (MQ=255)                                                                                                                                                                                                        aGATGCTGCGGTAATGGATAAGTTTAATATCCCCCGTCATATGCTGTTTGATGTGCAAATGCCTGGCACCGTCCTCGGACATATCACACCACAAGCCGCACTGGCGACACATTTCCCGGCAGGACTGCCGGTTGTTTGTACCACCAGTGATAAACCGGTAGAAGCTCTGGGGGCCGGATTACTGGATGATGAAACGGCGGTAATTTCTCTTGGCACTTACATCGCATTGATGATGAACGGCAAAGCACTGACGAAAGATCACGCAGAGAACTGGc                                                                         >  1:340770/1‑275 (MQ=255)                                                                                                                                                                                                                             gTTTAATATCCCCCGTCATATGCTGTTTGATGTGCAAATGCCTGGCACCGTCCTCGGACATATCACACCACAAGCCGCACTGGCGACACATTTCCCGGCAGGACTGCCGGTTGTTTGTACCACCAGTGATAAACCGGTAGAAGCTCTGGGGGCCGGATTACTGGATGATGAAACGGCGGTAATTTCTCTTGGCACTTACATCGCATTGATGATGAACGGCAAAGCACTGCCGAAAGATCCAGTAGCg                                                                                >  1:283037/1‑247 (MQ=255)                                                                                                                                                                                                                                tAATACCCCCCGTCATAGTCGGTTTGGTGTGCTAATGCCTGGCACCGTCCTCGGAAATAGCACACCACAAGCCGCCCGGGCGACAAATTTCCCGGCAGGACTGCCGGTTGTTTGGACCACCAGTGATAAACCGGTAGAAGCTCTGGGGGCCGGATTACTGGATGATGAAACGGCGGTAATTTCTCTTGGCACTTACATCGCATTGATGATGAACGGCAAAGCACTGCCGAAAGATCCAGTAGCGTACTGGCCGATTATGTCTTCTATTCCGCaaa                                                 <  2:723026/275‑1 (MQ=255)                                                                                                                                                                                                                                   tatCCCCCGTCATATGCTGTTTGATGTGCAAATGCCTGGCACCGTCCt                                                                                                                                                                                                                                                                                 >  1:321271/1‑48 (MQ=255)                                                                                                                                                                                                                                       ccccGTCATATGCTGTTTGATGTGCAAATGCCTGGCACCGTCCTCGGa                                                                                                                                                                                                                                                                             <  2:321265/48‑1 (MQ=255)                                                                                                                                                                                                                                       ccccGTCATATGCTGTTTGATGTGCAAATGCCTGGCACCGTCCTCGGACATATCACACCACAAGCCGCACTGGCGACACATTTCCCGGCAGGACTGCCGGTTGTTTGTACCACCAGTGATAAACCGGTAGAAGCTCTGGGGGCCGGATTACTGGATGATGAAACGGCGGTAAtt                                                                                                                                               >  2:145562/1‑174 (MQ=255)                                                                                                                                                                                                                                        cccGTCATATGCTGTTTGATGTGCAAATGCCTGGCACCGTCCTCGGACATATCACACCACAAGCCGCACTGGCGACACATTTCCCGGCAGGACTGCCGGTTGTTTGTACCACCAGTGa                                                                                                                                                                                                      >  2:249855/1‑118 (MQ=255)                                                                                                                                                                                                                                        cccGTCATATGCTGTTTGATGTGCAAATGCCTGGCACCGTCCTCGGACATATCACACCACAAGCCGCACTGGCGACACATTTCCCGGCAGGACTGCCGGTTGTTTGTACCACCAGTGATAAACCGGTAGAAGCTCTGGGGGCCGGATTACTGGATGATGAAACGGCGGTAATTTCTCTTGGCACTTACATCGCATATATGATGAACGGCAAAGCACTGCCGAAAGATCCAGTAGCGTACTGGCCGATTACGTCTTCTATTCCGCAAACATTTCtt                                         >  1:723036/1‑274 (MQ=255)                                                                                                                                                                                                                                        cccGTCATATGCTGTTTGATGTGCAAATGCCTGGCACCGTCCTCGGACATATCACACCACAAGCCGCACTGGCGACACATTTCCCGGCAGGACTGCCGGTTGTTTGTAACACCAGTGATAAACCGGTAGAAGCTCTGGGGGCCGGATTACTGGATGATGAAACGGCGGTAATTTCTCTTGGCACTTACATCGCATTGATGATGAACGGCAAAGCACTGCCACAAGATCCAGTAGCGTACAGGCCGATTATGTCTTCTATTCCGCAACCAATACTg                                         >  1:278243/1‑275 (MQ=255)                                                                                                                                                                                                                                           gTCATATGCTGTTTGATGTGCAAATGCCTGGCACCGTCCTCGGACATATCACACCACAAGCCGCACTGGCGACACATTTCCCGGCAGGACTGCCGGTTGTTTGTACCACCAGTGATAAACCGGTAGAAGCTCTGGGGGCCGGATTACTGGATGATGAAACGGCGGTAATTtctc                                                                                                                                           <  1:145563/174‑1 (MQ=255)                                                                                                                                                                                                                                            tCATATGCTGTTTGATGTGCAAATGCCTGGCACCGTCCTCGGACATATCACACCACAAGCCGCACTGGCGACACATTTCCCGGCAGGACTGCCGGTTGTTTGTACCACCAGTGATaaa                                                                                                                                                                                                  <  1:249860/118‑1 (MQ=255)                                                                                                                                                                                                                                                 tGCTGTTTGATGTGCAAATGCCTGGCACCGTCCTCGGACATATCACACCACAAGCCGCACTGGCGACACATTTCCCGGCAGGACTGCCGGTTGTTTGTACCACCAGTGATAAACCGGTAGAAGCTCTGGGGGCCGGATTACTGGATGATGAAACGGCGGTAATTTCTCTTg                                                                                                                                        >  1:601662/1‑171 (MQ=255)                                                                                                                                                                                                                                                     gTTTGATGTGCAAATGCCTGGCACCGTCCTCGGACATATCACACCACAAGCCGCACTGGCGACACATTTCCCGGCAGGACTGCCGGTTGTTTGTACCACCAGTGATAAACCGGTAGAAGCTCTGGGGGCCGGATTACTGGATGATGAAACGGCGGTAATTTCTCTTGGCAc                                                                                                                                    <  2:601653/171‑1 (MQ=255)                                                                                                                                                                                                                                                          aTGTGCAAATGCCTGGCACCGTCCTCGGACATATCACACCACANGCCGCACTGGCGACACATTTCCCGGCAGGACTGCCGGTTGTTTGTACCACCAGTGATAAACCGGTAGAAGCTCTGGGGGCCGGATTACTGGATGATGAAACGGCGGTAATTTCTCTTGGCACTTACATCGCATTGATGATGAACGACAAAGCACTGCCGAAAGATCCAGTAGCGTACTGGCCg                                                                       <  1:560070/227‑1 (MQ=255)                                                                                                                                                                                                                                                           tgtgCAAATGCCTGGCACCGTCCTCGGACATATCACACCACAAGCCGCACTGGCGACACATTTCCCGGCAGGACTGCCGGTTGTTTGTa                                                                                                                                                                                                                >  1:648449/1‑89 (MQ=255)                                                                                                                                                                                                                                                               cAAATGCCTGGCACCGTCCTCGGACATATCACACCACAAGCCGCACTGGCGACACATTTCCCGGCAGGACTGCCGGTTGTTTGTaccac                                                                                                                                                                                                            <  2:648440/89‑1 (MQ=255)                                                                                                                                                                                                                                                                         gCACCGTCCTCGGACATATCACACCACAAGCCGCACTGGCGACACATTTCCCGGCAGGACTGCCGGTTGTTTGTACCACCAGTGa                                                                                                                                                                                                      >  2:120206/1‑85 (MQ=255)                                                                                                                                                                                                                                                                             cGTCCTCGGACATATCACACCACAAGCCGCACTGGCGACACATTTCCCGGCAGGACTGCCGGTTGTTTGTACCACCAGTGATaaa                                                                                                                                                                                                  <  1:120207/85‑1 (MQ=255)                                                                                                                                                                                                                                                                             cGTCCTCGGACATATCACACCACAAGCCGCACTGGCGACACATTTCCCGGCAGGACTGCCGGTTGTTTGTACCACCAGTGATAAACCGGTAGAAGCTCTGGGGGCCGGATTACTGGATGATGAAACGGCGGTAATTTCTCTTGGCACt                                                                                                                                   >  1:173317/1‑148 (MQ=255)                                                                                                                                                                                                                                                                              gTCatcagaccattacagcctggcggcacacaagaagcttttttgttgagtaaatcttccggtgaaagatcctgcgccctggcatcctgaattaacgactcgcctagcatgtcgcgcagccagctcaccgtccacatgcctttgcgaataccgtaaccttcatacagcaatgtttgcggaatagaagacataatcggccagtac                                                                          >  1:598538‑M1/1‑3 (MQ=255)                                                                                                                                                                                                                                                                              gTCCTCGGACATATCACACCACAAGCCGCACTGGCGACACATTTCCCGGCAGGACTGCCGGTTGTTTGTACCACCAGTGATAAACCGGTAGAAGCTCTGGGGGCCGGATTACTGGATGATGAAACGGCGGTAATTTCTCTTGGCACTTACATCGCATTGATGATGAACGGCa                                                                                                          >  1:703589/1‑172 (MQ=255)                                                                                                                                                                                                                                                                               tcatcagaccattacagcctggcggcacacaagaagcttttttgttgagtaaatcttccggtgaaagatcctgcgccctggcatcctgaattaacgactcgcctagcatgtcgcgcagccagctcaccgtccacatgcctttgcgaataccgtaaccttcatacagcaatgtttgcggaatagaagacataatcggccagtacgctactggatctttcggcagtgctttgccgttcatcatcaatgcgatgtaagtgccaagagaaattaccgcc  >  1:428479‑M1/1‑2 (MQ=255)                                                                                                                                                                                                                                                                               tcatcagaccattacagcctggcggcacacaagaagcttttttgttgagtaaatcttccggtgaaagatcctgcgccctggcatcctgaattaacgactcgcctagcatgtcgcgcagccagctcaccgtccacatgcctttgcgaataccgtaaccttcatacagcaatgtttgcggaatagaagacataatcggcc                                                                               >  1:637789‑M1/1‑2 (MQ=255)                                                                                                                                                                                                                                                                               tcatcagaccattacagcctggcggcacacaagaagcttttttgttgagtaaatcttccggtgaaagatcctgcgccctggcatcctgaattaacgactcgcctagcatgtcgcgcagccagctcaccgtccaca                                                                                                                                              >  1:71107‑M1/1‑2 (MQ=255)                                                                                                                                                                                                                                                                               tcatcagaccattacagcctggcggcacacaagaagcttttttgttgagtaaatcttccggtgaaagatcctgcgccctggcatcctgaattaacgactcgcctagcatgtcgcgcagccagct                                                                                                                                                         >  1:449961‑M1/1‑2 (MQ=255)                                                                                                                                                                                                                                                                               tCCTCGGACATATCACACCACAAGCCGCACTGGCGACACATTTCCCGGCAGGACTGCCGGTTGTTTGTa                                                                                                                                                                                                                >  2:288133/1‑69 (MQ=255)                                                                                                                                                                                                                                                                                |                                                                                                                                                                                                                                                                                  ATGGCACGCCTGCTGCGCCGTTGATTAGCTGGCAGGATGCACGCGTTACACGCCCTTACGAACACACTAACCCTGACGTGGCATATGTCACCTCTTTTTCGGGTTATCTGACGCATCGCTTAACCGGCGAGTTTAAAGACAATATCGCCAACTATTTTGGTCAGTGGCCGGTGGATTATAAGAGCTGGGCATGGAGCGAAGATGCTGCGGTAATGGATAAGTTTAATATCCCCCGTCATATGCTGTTTGATGTGCAAATGCCTGGCACCGTCCTCGGACATATCACACCACAAGCCGCACTGGCGACACATTTCCCGGCAGGACTGCCGGTTGTTTGTACCACCAGTGATAAACCGGTAGAAGCTCTGGGGGCCGGATTACTGGATGATGAAACGGCGGTAATTTCTCTTGGCACTTACATCGCATTGATGATGAACGGCAAAGCACTGCCGAAAGATCCAGTAGCGTACTGGCCGATTATGTCTTCTATTCCGCAAACATTGCTGTATGAAGGTTACGGTATTCGCAAAGGCATGTGGACGGTG  >  CP009273/2895532‑2896076

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.