New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP009273	= 2919455	51 (1.330)	9 (0.250)	5/296	NT	15.6%	coding (749/849 nt)	queF	7‑cyano‑7‑deazaguanine reductase (NADPH‑dependent)
	?	CP009273	= 2919562	49 (1.350)					intergenic (+7/‑105)	queF/ygdH	7‑cyano‑7‑deazaguanine reductase (NADPH‑dependent)/UPF0717 family protein

ATTCACTACTGACTATCTGGAGAATGCCACCTGTGGTGAAAAAGTAGTGGAAGAGACGCTTGTCAGCCACCTGCTGAAATCAAACTGCCTGATCACCCATCAACCAGATTGGGGTTCGCTCCAAATTCAGTATCGTGGACGCCAAATTGACAGAGAAAAACTGCTGCGTTACCTGGTCTCATTCCGTCATCACAACGAGTTCCACGAACAGTGCGTGGAACGCATCTTTAATGACCTGTTACGCTTCTGCCAGCCAGAAAAATTGAGCGTTTACGCACGTTATACCCGTCGTGGCGGTCTGGACATTAACCCGTGGCGCAGTAATAGCGATTTTGTCCCATCGACCACAAGACTGGTTCGGCAATAAATTTTTTCTCAATTTTGCGTGCTGGATTCACGCAGAAGGTTGTGAAAGGTCATCAGGCAGGGCTATTGTAATCAAAGGGAATGACGATATTCGTCCCATAAGGAGTTTTTCTTGATTACACATATTAGCCCGCTTGGCTCCATGGATATGTTGTCGCAGCTGGAAGTGGATAT  >  CP009273/2919189‑2919728                                                                                                                                                                                                                                                                           |                                                                                                                                                                                                                                                                                  aTTCACTACTTACTATCTGGAGAATGCCACCTGTGGTGAAAAAGTAGTGGAAGAGACTCTTGTCAGCCACCTGCTGAAATCAAACTGCCTGATCACCCATCAACCAGATTGGGGTTCGCTCCAAATTCAGTATCGTGGACGCCAAATTGACAGAGAAAAACTGCTGCGTTACCTGGTCTCATTCCGTCATCACAACGAGTTCCACGAACAGTGCGTGGAACGCATCTTTAATGACCTGTTACGCTTCTGCCAGCCAGAAAAATTGAGCGTTTACg                                                                                                                                                                                                                                                                           <  1:589786/275‑1 (MQ=255) aTTCACTACTGACTATCTGGAGAATGCCACCTGTGGTGAAAAAGTAGTGGAAGAGACGCTTGTCAGCCACCTGCTGAAATCAAACTGCCTGATCACCCATCAACCAGATTGGGGTTCGCTCCAAATTCAGTATCGTGGACGCCAAATTGACAGAGAAAAACTGCTGCGTTACCTGGTCTCATTCCGTCATCACAACGAGTTCCACGAACAGTGCGTGGAACGCATCTTTAATGACCTGTTACGCTTCTGCCAGCCAGAAAAATTGAGCGTTTACg                                                                                                                                                                                                                                                                           <  1:155506/275‑1 (MQ=255)      ctactGACTATCTGGCGAATGCCACCTTGTGTAAAAAAGTAGTGGAAGAGACGCTTGTCAGCCACCTGATGAAATCAAACTGCCTGATCACCCATCAACCAGATTGGGGTTCGCTCCAAATTCAGTATCGTGGACGCCAAATTGACAGAGAAAAACTGCTGCGTTACCTGGTCTCATTCCGTCNTCACAACGAGTTCCACGAACAGTGCGTGGAACGCATCTTTAATGACCTGTTACGCTTCTGCACGCCAGAAAAATTGAGCGTTTACGCAAGt                                                                                                                                                                                                                                                                      >  1:486108/1‑275 (MQ=255)                          gCCACCTGTGGTGAAAAAGTAGTGGAAGAGACGCTTGTCAGCCACCTGCTGAAATCAAACTGCCTGATCACCCATCAACCAGATTGGGGTTCGCTCCAAATTCAGTATCGTGGACGCCAAATTGACAGAGAAAAACTGCTGCGTTACCTGGTCTCATTCCGTCATCACAACGAGTTCCACGAACAGTGCGTGGAACGCATCTTTAATGACCTGTAACGCTTCTGCCAGCCAGAAAAATTGAGCGTTTACGCACGTTATACCCGCCGTGGCGTTcc                                                                                                                                                                                                                                                  >  2:48100/1‑274 (MQ=255)                           ccACCTGTGGTGAAAAAGTAGTGGAAGAGACGCTTGTCAGCCACCTGCTGAAATCAAACTGCCTGATCACCCATCAACCAGATTGGGGTTCGCTCCAAATTCAGTATCGTGGACGCCAAATTGACAGAGAAAAACTGCTGCGTTACCTGGTCTCATTCCGTCGTCACAACGAGTTCCACGAACAGTGCGTGGAACGCATCTTTAATGACCTGTGACGCTTCTGCCAGCCAGAAAAATTGAGCGTTTACGCACGTTATACCCGTCGTGGCGGTCt                                                                                                                                                                                                                                                  <  1:179676/274‑1 (MQ=255)                                   ggtgCAAACGTCGTGGAAGAGACGCTTGTCAGCCACCTGCCGAAATCAAACTGTCTGATCCCCCATCAACAAGCGTCGGGTTCGCTCCAAATTCAGTATCGTGGACGCCAATTTGACAGAGAAAAACTGCTGCGTTACCTGGTCTCATTCCGTCATCACAACGAGTTCCACGAACAGTGCGTGGAACGCATCTTTAATGACCTGTTACGCTTCTGCCAGCCAGAAAAATTGAGCGTTTACGCACGTTATACACGTCTCGGCGGtaggtacagtaa                                                                                                                                                                                                                                         >  2:657020/1‑264 (MQ=255)                                                                         gctgAAATCAAACTGCCTGATCACCCATCAACCAGATTGGGGTTCGCTCCAAATTCAGTATCGTGGACGCCAAATTGACAGAGAAAAACTGCTGCGTTACCTGGTCTCATTCCGTCATCACAACGAGTTCCACGAACAGTGCGTGGAACGCATCTTTAATGACCTGTTACGCTTCTGCCAGCCAGAAAAATTGAGCGTTTACGCACGTTATACCCGTCGTGGCGGGCTGGACATTAAGCCGTGGCGCGGTAATAGCGAATTTGTCCCATCGAcc                                                                                                                                                                                                    >  2:218715/1‑274 (MQ=255)                                                                                          ggaaaacccaaCGACAAGAGTAGGGTTCGCTCCTATTTCGCTACCGTGGACGCCAAATTGTCAGAGAAGAACTGCTGGGGTACCTGGTCTAATTCCGTACTCACAACGTGTTCCACGAACAGTGCGTGGAACGCATCTTTAATGACCTGTTACGCTTCTGCCAGCCAGAAAAATTGAGaaaaaatttattgccgaaccagtcttgtggtcgatgggacaaaatcgctattacggcgccacgggttaatgtccagcccgccacgacgggtataacg                                                                                                                                                                                  <  2:238675‑M1/270‑98 (MQ=255)                                                                                            aTCACCCATCAACCAGATTGGGGTTCGCTCCAAATTCAGTATCGTGGACGCCAAATTGACAGAGAAAAACTGCTGCGTTACCTGGTCTCATTCCGTCATCACAACGAGTTACACGAACAGTGCGTGGAACGCATCTTTAATGACCTGTTACGCTTCTGCCAGCCAGAAAAATTGAGCGTTTACGCACGCTATACCCGTCGTGGCGGTCTGGACATTAACCCGTCGCGCAGTAATAGCGATTTTGTCCCATCGACCACAAGCCTGGTTCGGCAATa                                                                                                                                                                                >  1:123674/1‑275 (MQ=255)                                                                                                      tccacatatggagttcgCTCCAAATTCAGGATCGTTGACGCCAAAGTGACAGTGGAAGACGGCTGCGTTACCTGGTCTCATTCCGTCATCACAACGAGTTCCACGAACAGTGCGTGGAACGCATCTTTAAGGACCTGTTACTCTTCTGGCAGCCAGAAAAATGGAGCGTGGACGCACGTTATACCCGTCGTGGCGGTCTGGACATTAACCCGTGTCGCAGTAATAGCGATTTTGTCCCATCGACCACAAGACTGGTTCGGCAATAAATTTTTTc                                                                                                                                                                       >  2:123673‑M2/9‑273 (MQ=255)                                                                                                           gATTGGGGTTCGCTCCAAATTCAGTATCGTGGACGCCAAATTGACAGAGAAAAACTGCTGCGTTACCTGGTCTCATTCCGTCATCACAACGAGTTCCACGAACAGTGCGTGGAACGCATCTTTAATGACCTGTTACGCTTCTGCCAGCCAGAAAAATTGAGCGtt                                                                                                                                                                                                                                                                               >  2:65506/1‑165 (MQ=255)                                                                                                           gATTGGGGTTCGCTCCAAATTCAGTATCGTGGACGCCAAATTGACAGAGAAAAACTGCTGCGTTACCTGGTCTCATTCCGTCATCACAACGAGTTCCACGAACAGTGCGTGGAACGCATCTTTAATGACCTGTTACGCTTCTGCCAGCCAGAAAAATTGAGCGTTTACGCACGTTATACCCGTCGTGGCGGTCTGGACATTAACCCGTGGCGCAGTAATAGCGATTTTGTCCCATCGACCACAAGACTGGTTCGGCAAt                                                                                                                                                                                 >  1:437680/1‑259 (MQ=255)                                                                                                               ggggTTCGCTCCAAATTCAGTATCGTGGACGCCAAATTGACAGAGAAAAACTGCTGCGTTACCTGGTCTCATTCCGTCATCACAACGAGTTCCACGAACAGTGCGTGGAACGCATCTTTAATGACCTGTTACGCTTCTGCCAGCCAGAAAAATTGAGCGTTTACg                                                                                                                                                                                                                                                                           <  1:65507/165‑1 (MQ=255)                                                                                                                   ttCGCTCCAAATTCAGTATCGTGGACGCCAAATTGACAGAGAAAAACTGCTGCGTTACCTGGTCTCATTCCGTCATCACAACGAGTTCCACGAACAGTGCGTGGAACGCATCTTTAATGACCTGTTACGCTTCTGCCAGCCAGAAAAATTGAGCGTTTACGCACGTTATACCCGTCGTGGCGGTCTGGACATTAACCCGTGGCGCAGTAATAGCGATTTTGTCCCATCGACCACAAGACTGGTTCGGCAATAAATTTTTTCTCAATTTTGCGTGc                                                                                                                                                         <  1:218720/275‑1 (MQ=255)                                                                                                                      gCTCCAAATTCAGTATCGTGGACGCCAAATTGACAGAGAAAAACTGCTGCGTTACCTGGTCTCATTCCGTCATCACAACGAGTTCCACGAACAGTGCGTGGAACGCATCTTTAATGACCTGTTACGCTTCTGCCAGCCAGAAAAATTGAGCGTTTACGCACGTTATACACGTCGTGGCGGTCTGGACCTTAACCCGt                                                                                                                                                                                                                                    >  1:80596/1‑197 (MQ=255)                                                                                                                           aaaTTCAGTATCGTGGACGCCAAATTGACAGAGAAAAACTGCTGCGTTACCTGGTCTCATTCCGTCATCACAACGAGTTCCACGAACAGTGCGTGGAACGCATCTTTAATGACCTGTTACGCTTCTGCCAGCCAGAAAAATTGAGCGTTTACGCACGTTATACCCGTCGTGGCGGTCTGGACATTAACCCGTGGCGCAGTAATAGCGATTTTGTCCCATCGACCACAAGACTGGTTCGGCAATAAATTTTTTCTCAATTTTGCGTGCTGGAtt                                                                                                                                                   <  1:48100/273‑1 (MQ=255)                                                                                                                                   tATCGTGGACGCCAAATAGACAGAGACAAACTGTGGCGTGACCTGGTCTCATTACGTCATCACAACGAGTTCCGCGCACAGTGCGTGGAACACATCTTTAATGACCTGTTACGCTTCTGCCAGCAAGAAAAAATGAGCGTTTACGCACGTTATACCCGTCGTGGCGGTCTGGACATTAACCCGTGGCGCAGTAATAGCGATTTTGTCCCATCGACCACAAGACTGGTTCGGCAATAAATTTTTTCTCAATTTTGCGTGCTGGATTCACGCAGAAg                                                                                                                                         <  2:303061/275‑1 (MQ=255)                                                                                                                                               cAAATTGACAGAGAAAAACTGCTGCGTTACCTGGTCTCATTCCGTCATCACAACGAGTTCCACGAACAGTGCGTGGAACGCATCTTTAATGACCTGTTACGCTTCTGCCAGCCAGAAAAATTGAGCGTTTACGCACGTTATACCCGTCGTGGCGGTCTGGACATTAACCCGTGGCGCAGTAATAGCGATTTTGTCCCATCGACCACAAGACTGGTTCGGCAATAAATTTTTTCTCAATTTTGCGTGCTGGATTCACGCAGAAGGTTGTGAAAGGt                                                                                                                             >  1:659176/1‑275 (MQ=255)                                                                                                                                                        agagAAAAACTGCTGCGTTACCTGGTCTCATTCCGTCATCACAACGAGTTCCACGAACAGTGCGTGGAACGCATCTTTAATGACCTGTTACGCTTCTGCCAGCCAGAAAAATTGAGCGTTTACGCACGTTATACCCGTCGTGGCGGTCTGGACATTAACCCGTGGCGCAGTAATAGCGATTTTGTCCCATCGACCACAAGACTGGTTCGGCAATAAATTTTTTCTCAATTTTGCGTGCTGGATTCACGCAGAAGGTTGTGAAAGGTCATcagg                                                                                                                      <  2:659167/273‑1 (MQ=255)                                                                                                                                                         gagaAAAACTGCTGCGTTACCTGGTCTCATTCCGTCATCACAACGAGTTCCACGAACAGTGCGTGGAACGCATCTTTAATGACCTGTTACGCTTCTGCCAGCCAGAAAAATTGAGCGtt                                                                                                                                                                                                                                                                               >  2:322780/1‑119 (MQ=255)                                                                                                                                                           gaAAAACTGCTGCGTTACCTGGTCTCATTCCGTCATCACAACGAGTTCCACGAACAGTGCGTGGAACGCATCTTTAATGACCTGTTACGCTTCTGCCAGCCAGAAAAATTGAGaaaaaatttattgccgaaccagtcttgtggtcgatgggacaaaatcgctattactgcgccacgggttaatgtccagaccgccacgacgggtat                                                                                                                                                                                      >  1:524860‑M1/1‑113 (MQ=255)                                                                                                                                                             aaaaCTGCTGCGTTACCTGGTCTCATTCCGTCATCACAACGAGTTCCACGAACAGTGCGTGGAACGCATCTTTAATGACCTGTTACGCTTCTGCCAGCCAGAAAAATTGAGCGTTTACg                                                                                                                                                                                                                                                                           <  1:322786/119‑1 (MQ=255)                                                                                                                                                               aaCTGCTGCGTTACCTGGTCTCATTCCGTCATCACAACGAGTTCCACGAACAGTGCGTGGAACGCATCTTTAATGACCTGTTACGCTTCTGCCAGCCAGAAAAATTGAGaaaaaatttattgccgaaccagtcttgtggtcgatgggacaaaatcgctattactgcgccacgggttaatgtccagaccgccacgacgggtataacg                                                                                                                                                                                  <  2:524853‑M1/206‑98 (MQ=255)                                                                                                                                                                    ctgcGTTACCTGGTCTCATTCCGTCATCACAACGAGTTCCACGAACAGTGCGTGGAACGCATCTTTAATGACCTGTTACGCTTCTGCCAGCCAGAAAAATTGAGaaaaaatttattgccgaaccagtcttgtggtcgatgggacaaaatcgctattactgcgccacgggttaatgtccagaccgacacgacgggtat                                                                                                                                                                                      >  1:342623‑M1/1‑104 (MQ=255)                                                                                                                                                                        gTTACCTGGTGTCATTCCGTCATCAAAAAGAGTTCCACGAACAGTGCGTGGAACGCATCTTTAATGACCTGTTACGCTTCTGCCAGCCAGAAAAATTGAGaaaaaatttattgccgaaccagtcttgtggtcgaggggacaaaatcgctattactgcgccacgggttaatgtccagaccgccacgacgggtataacg                                                                                                                                                                                  <  2:342617‑M1/197‑98 (MQ=255)                                                                                                                                                                          agacaggTCTCATTCCGTCATCCCAACGAGTTCCACGAACAGTGCCTGTAACGCATCTTTAATGACATGTTACGCTTCTGCCAGCCAGAAAAATTGAGCGTTTACGCACGTTATACCCGTCGTGGCGTTCTGGACATTAACCCGTGGCGCAGTAATAGCGATTTTGTCCCATCGACCACAAGACTGGTTCGGCAATAAATTTTTTCTCAATTTTGCGTGCTGGATTCACGCAGAAGGTTGTGAAAGGTCATCAGGCAGGGCTATTGTAATCaaa                                                                                                   <  2:710689/269‑1 (MQ=255)                                                                                                                                                                                      ttCCGTCATCACAACGAGTTCCACGAACAGTGCGTGGAACGCATCTTTAATGACCTGTTACGCTTCTGCCAGCCAGAAAAATTGAGCGTTTACGCACGTTATACCCGTCGTGGCGGTCTGGACATTAACCCGt                                                                                                                                                                                                                                    >  2:550279/1‑133 (MQ=255)                                                                                                                                                                                          gTCATCACAACGAGTTCCACGAACAGTGCGTGGAACGCATCTTTAATGACCTGTTACGCTTCTGCCAGCCAGAAAAATTGAGCGTTTACGCACGTTATACCCGTCGTGGCGGTCTGGACATTAACCCGTGgcg                                                                                                                                                                                                                                <  1:550288/133‑1 (MQ=255)                                                                                                                                                                                           tcatcaCAACGAGTTCCACGAACAGTGCGTGGAACGCATCTTTAATGACCTGTTACGCTTCTGCCAGCCAGAAAAATTGAGCGtt                                                                                                                                                                                                                                                                               >  2:50626/1‑85 (MQ=255)                                                                                                                                                                                           tcatcaCAACAAGTTCCACGAACAGTGCGTGGAACGCATCTTTAATGACCTGTTACGCTTCTGCCAGCCAGAAAAATTGAGCGTTTACGCACGTTATACCCGTCGTGGCGGTCTGGACATTAACCCGTGGCGCAGTAATAGCGATTTTGTCCCATCGACCACAAGACTGGTTCGGCAATAAATTTTTTCTCAATTATGCGTGCTGGATTCACGCAGAAGGTTGTGAAAGGTCATCAGGCAGGGCTATTGTAATCAAAGGGAATGACGactgtcac                                                                                 >  1:710699/1‑268 (MQ=255)                                                                                                                                                                                               cacaACGAGTTCCACGAACAGTGCGTGGAACGCATCTTTAATGACCTGTTACGCTTCTGCCAGCCAGAAAAATTGAGCGTTTACg                                                                                                                                                                                                                                                                           <  1:50626/85‑1 (MQ=255)                                                                                                                                                                                                        ttCCACGAACAGTGCGTGGAACGCATCTTTAATGACCTGTTACGCTTCTGCCAGCCAGAAAAATTGAGCGTTTACGCACGTTATACCCGTCGTGGCGGTCTGGACATTAACCCGTGGCGCAGTAATAGCGATTTTGTCCCATCGACCACAAGACTGGTTCGGCAATAAATTTTTTCTCAATTTTGCGTGCTGGATTCACGCAGAAGGTTGTAAAAGTTCATCAGGCAGGGCTATTGTAATCAAAGGGAATGACGATATTCTTCCCTTAAgaggtc                                                                    >  2:159132/1‑270 (MQ=255)                                                                                                                                                                                                                    tGCGTGGAACGCATCTTTAGTGACCTGTTACGCTTCTGCCAGCCAGAAAAATTGAGCGtt                                                                                                                                                                                                                                                                               >  1:572998/1‑60 (MQ=255)                                                                                                                                                                                                                    tGCGTGGAACGCATCTTTAATGACCTGTTACGCTTCTGCCAGCCAGAAAAATTGAGCGTTTACGCACGTTATACCCGTCGTGGCGGTCTGGACATTAACCCGTGGCACAGTAATAGc                                                                                                                                                                                                                      >  2:306373/1‑117 (MQ=255)                                                                                                                                                                                                                     gcttGGATCGCATTGTTAATGACTTTTTATGCGTCTGCCATCCAGAAAAATTGAGCTTTTACGCATGTTATACCCGTCGTGGCGGTCTGGACATTAACCCGTGGCGCAGTAATAGCGATTTTGTCCCATCGACCACAAGACTGGTTCGGCAATAAATTTGTTCTCAATTTTGCGTGCTGGATTCACGCAGAAGGTTGTGAAAGGTCATCAGGCAGGGCTATTGTAATCAAAGGGAATGACGATATTCGTCCCATAAGGAGTTTTTCTTGATTac                                                        <  1:425091/271‑1 (MQ=255)                                                                                                                                                                                                                     gCGTGGAACGCATCTTTAATGACCTGTTACGCTTCTGCCAGCCAGAAAAATTGAGCGTTTACGCACGTTATACCCGTCGTGGCGGTCTGGACATTAACCCGTGGCGCAGTAATAGCGATTTTGTCCCATCGACCACAAGACt                                                                                                                                                                                            >  2:686272/1‑142 (MQ=255)                                                                                                                                                                                                                        tGGAACGCATCTTTAATGACCTGTTACGCTTCTGCCAGCCAGAAAAATTGAGCGTTTACg                                                                                                                                                                                                                                                                           <  2:572989/60‑1 (MQ=255)                                                                                                                                                                                                                        tGGAACGCATCTTTAATGACCTGTTACGCTTCTGCCAGCCAGAAAAATTGAGCGTTTACGCACGTTATACCCGTCGTGGCGGTCTGGACATTAACCCGTGGCACAGTAATAGCGAtt                                                                                                                                                                                                                  <  1:306379/117‑1 (MQ=255)                                                                                                                                                                                                                         ggAACGCATCTTTAATGACCTGTTACGCTTCTGCCAGCCAGAAAAATTGAGCGTTTACGCACGTTATACCCGTCGTGGCGGTCTGGACATTAACCCGTGGCGCAGTAATAGCGATTTTGTCCCATCGACCACAAGACTGGtt                                                                                                                                                                                        <  1:686281/142‑1 (MQ=255)                                                                                                                                                                                                                            aCGCATCTTTCATGACCTGTTACGCTTCCGCCAGCCAGAAAAATTGAGCGtt                                                                                                                                                                                                                                                                               >  1:723400/1‑52 (MQ=255)                                                                                                                                                                                                                            aCGCATCTTTAATGACCTGTTACGCTTCTGCCAGCCAGAAAAATTGAGCGTTTACGCACGTTATACCCGTAGTGGCGGTCTGGACATTAACCCGTGGCGCAGTATTAGCGATTTTGTCCCATCGACCACAAGACTGGTTCGGCAATAAATTTTTTCTCAATTTTGCGTGGTGGATTCACGCAGAAGGTTTTGTAAGGTCATCAGACAGCACTATTGTACTCAAAGGGAATGGCGATATTCGGCCCATAAGTGGTTTTTCTTGATTAcacagttt                                                 >  2:239677/1‑270 (MQ=255)                                                                                                                                                                                                                              gCATCTTTAATGACCTGTTACGCTTCTGCCAGCCAGAAAAATTGAGaaaaaatttattgccgaacagtcttgtggtcgatgggacaaaatcgctattactgcgccacgggttaatgtccagaccgccacgacgggtat                                                                                                                                                                                       >  1:7319‑M1/1‑46 (MQ=255)                                                                                                                                                                                                                                aTCTTTAATGACCTGTTACGCTTCTGCCAGCCAGAAAAATTGAGCGtt                                                                                                                                                                                                                                                                               >  1:702881/1‑48 (MQ=255)                                                                                                                                                                                                                                aTCTTTAATGACCTGTTACGCTTCCGCCAGCCAGAAAAATTGAGCGTTTACg                                                                                                                                                                                                                                                                           <  2:723390/52‑1 (MQ=255)                                                                                                                                                                                                                                  cTTTAATGACCTGTTACGCTTCTGCCAGCCAGAAAAATTGAGaaaaaatttattgccgaacagtcttgtggtcgatgggacaaaatcgctattactgcgccacgggttaatgtccagaccgccacgacgggtataacg                                                                                                                                                                                   <  2:7319‑M1/138‑97 (MQ=255)                                                                                                                                                                                                                                    ttAATGACCTGTTACGCTTCTGCCAGCCAGAAAAATTGAGCGTTTACg                                                                                                                                                                                                                                                                           <  2:702872/48‑1 (MQ=255)                                                                                                                                                                                                                                    ttAATGACCGGTTACGCTTCTGCCAGCCAGAAAAATTGAGCGTTTACGCACGTTATACCCGTCGTGGCGGTCTGGACATTAACCCGTGGCGCAGTAATAGCGATTTTGTCCCTTCNACCACAAGACGAATTCGGCAATTAATTTTTTCTCAATTTTGCGTGCTGGATTCACGCAGAAGGTTGTGAAAGGTCATCATGCAGTGCTATTGTAATCAAAGGGAATGACGATATTCGTCCCATAAGGAGTTTTTCTTGATTACACATATTAGCCCGCt                                         <  1:657029/274‑1 (MQ=255)                                                                                                                                                                                                                                          aCCTGTTACGCTTCTGCCAGCCAGAAAAATTGAGCGTTTACGCACGTTATACCCGTCGTGGCGGTCTGGACATTAACCCGTGGCGCAGTAATAGCGATTTTGTCCCATCGACCACAAGACTGGTTCGGCAATAAATTTTTTCTCAATTTTGCGTGCTGGATTCACGCAGAAGGTTGTGAAAGGTCATCAGGCAGGGCTATTGTAATCaaa                                                                                                   >  1:653373/1‑210 (MQ=255)                                                                                                                                                                                                                                            cTGTTACGCTTCTGCCAGCCAGAAAAATGGAGCGTTTACGCACGTTATACCCGTCGTGGCGGTCTGGACATTAACCCGTGGCGCAGTAATAGCGATTTTGTCCCATCGACCACAAGACTGGTTCGGCAATAAATTTTTTCTCAATTTTGCGTGCTGGATTCACGCAGAAGGTTGTGAAAGGTCNTCAGGCAGGGCTAt                                                                                                             >  1:518957/1‑198 (MQ=255)                                                                                                                                                                                                                                             tGTTACGCTTCTGCCAGCCAGAAAAATTGAGCGTTTACGCACGTta                                                                                                                                                                                                                                                                    >  1:209639/1‑46 (MQ=255)                                                                                                                                                                                                                                             tGTTACGCTTCTGCCAGCCAGAAAAATTGAGCGTTTACGCACGTTATACCCGTCGTGGCGGTCTGGACATTAACCCGTGGCGCAGTAATAGCGATTTTGTCCCATCGACCACAAGACTGGTTCGGCAATAAATTTTTTCTCAATTTTGCGTGCTGGATTCACGCAGAAGGTTGTGAAAGGTCATCAGGCAGGGCTATTGTAATCAAAGGGAATGACGatat                                                                                     >  2:72161/1‑221 (MQ=255)                                                                                                                                                                                                                                              gTTACGCTTCTGCCAGCCAGAAAAATTGAGCGTTTACGCACGTTATACCCGTCGTGGCGGTCTGGACATTAACCCGTGGCGCAGTAATAGCGATTTTGTCCCATCGACCACAAGACTGGTTCGGCAATAAATTTTTTCTCAATTTTGCGTGCTGGATTCACGCAGAAGGTTGTGAAAGGTCATCAGGCAGGGCTATTGTAATCAAAGGGa                                                                                               <  2:653364/210‑1 (MQ=255)                                                                                                                                                                                                                                               ttACGCTTCTGCCAGCCAGAAAAATTGAGCGTTTACGCACGTTATACCCGTCGTGGCGGTCTGGACATTAACCCGTGGCGCAGTAATAGCGATTTTGTCCCATCGACCACAAGACTGGTTCGGCAATAAATTTTTTctcaa                                                                                                                                                                   <  1:594437‑M2/141‑6 (MQ=255)                                                                                                                                                                                                                                                tACGCTTCTGCCAGCCAGAAAAATTGAGCGTTTACg                                                                                                                                                                                                                                                                           <  2:528455/36‑1 (MQ=255)                                                                                                                                                                                                                                                 aCGCTTCTGCCAGCCAGAAAAATTGAGCGTTTACGCACGTTATAcc                                                                                                                                                                                                                                                                <  2:209635/46‑1 (MQ=255)                                                                                                                                                                                                                                                 aCGCTTCTGCCAGCCAGAAAAATTGAGCGTTTACGCACGTTATACCCGTCGTGGCGGTCTGGACATTAACCCGTGGCGCAGTAATAGCGATTTTGTCCCATCGACCACAAGACTGGTTCGGCAATAAATTTTTTCTCAATTTTGCGTGCTGGATTCACGCAGAAGGTTGTGAAAGGTCATCAGGCAGGGCTATTGTAATCAAAGGGAATGACGATATTCGt                                                                                 <  1:72162/221‑1 (MQ=255)                                                                                                                                                                                                                                                   gCTTCTGCCAGCCAGAAAAATTGAGCGTTTACGCACGTTATACCCGTCGTGGCGGTCTGGACATTAACCCGTGGCGCAGTAATAGCGATTTTGTCCCATCGACCACAAGACTGGTTCGGCAATAAATTTTTTctcaatttt                                                                                                                                                               >  2:594428‑M2/1‑132 (MQ=255)                                                                                                                                                                                                                                                      tCTGCCAGCCAGAAAAATTGAGaaaaaatttattgccgaaccagtcttgtggtcgatgggacaaaatcgctattactgcgccacgggttaatgtccagaccgccacgacgggtat                                                                                                                                                                                      >  2:564180‑M1/1‑22 (MQ=255)                                                                                                                                                                                                                                                       cTGCCAGCCAGAAAAATTGAGCGTTTACGCACGTTATACCCGTCGTGGCGGTCTGGACATTAACCCGTGGCGCAGTAATAGCGATTTTGTCCCATCGACCACAAGACTGGTTCGGCAATAACTTTTTTCTCAATTTTGCGTGCTGGATTCACGCAGAAGGTTGTGAAAGGTCATCAGTCAGGGCTATTGTAATCAAAGGGAATGACGATATTCGTCCCATAAGGAGTTTTTCTTGATTACACATATTATCACGCTTGGc                                     >  2:514974/1‑259 (MQ=255)                                                                                                                                                                                                                                                       cTGCCAGCCAGAAAAATTGAGCGTTTACGCACGTTATACCCGTCGTGGCGGTCTGGACATTAACCCGTGGCGCAGTAATAGCGATTTTGTCCCATCGACCACAAGACTGGTTCGGCAATAAATTTTTTCTCAATTTTGCGTGCTGGATTCACGCAGAAGGTTGTGAAAgg                                                                                                                              >  1:531355/1‑170 (MQ=255)                                                                                                                                                                                                                                                         gccagccaGAAAAATTGAGCGTTTACGCACGTTATACCCGTCGTGGCGGTCTGGACATTAACCCGTGGCGCAGTAATAGCGATTTTGTCCCATCGACCACAAGACTGGTTCGGCAATAAATTTTTTCTCAATTTTGCGTGCTGGATTCACg                                                                                                                                               >  1:413039/1‑151 (MQ=255)                                                                                                                                                                                                                                                         gccagccaGAAAAATTGAGCGTTTACGCACGTTATACCCGTCGTGGCGGTCTGGACATTAACCCGTGGCGCAGTAATAGCGATTTTGTCCCATCGACCACAAGACTGGTTCGGCAATAAATTTTTTCTCAATTTTGCGTGCTGGATTCACGCAGAAGGTTGTGAAAGGtcat                                                                                                                          >  1:144126/1‑172 (MQ=255)                                                                                                                                                                                                                                                         gccagccaGAAAAATTGAGCGTTCACGCACGTTATACCCGTCGTGGCGGTCTGGACATTAACCCGTGGCCCAGTAATAGCGATTTTGTCCCATCGACCACAAGACTGGTTCGGCAATAAATTTTTTCTCAATTTTGCGTGCTGGATTCACGCAGAAGGTTGTGAAAGGtcat                                                                                                                          >  1:498493/1‑172 (MQ=255)                                                                                                                                                                                                                                                          ccagccagAAAAATTGAGaaaaaatttattgccgaaccagtcttgtggtcgatgggacaaaatcgctattactgcgccacgggttaatgtccagaccgccacgacgggtataacg                                                                                                                                                                                  <  1:564189‑M1/115‑98 (MQ=255)                                                                                                                                                                                                                                                           cagcgagAAAAATTGAGCGTTTACGCACGTTATACCCGGCGTGGCGGTCTGGACATTAACCCGTGGCGCAGTAATNGCGATTTTGTCCCATCGACCACAAGACTGGTTCGGCAATAAATTTTTTCTCAATTTTGCGTGCTGGATTCACGCAGAAGGTTGTGAAAGGTCATCAGGCAGGGCTATTGTAATCAAAGGGAATGACGATATTCGTCCCATAAGGAGTTTTTCTTCATTACACATATTAGCCCGCTTGGCTCCa                                 <  1:514981/259‑1 (MQ=255)                                                                                                                                                                                                                                                           cagccagAAAAATTGAGCGTTTACGCACGTTATACCCGTCGTGGCGGTCTGGACATTAACCCGTGGCGCAGTAATAGCGATTTTGTCCCATCGACCACAAGACTGGTTCGGCAATAAATTTTTTCTCAATTTTGCGTGCTGGATTCACGCAGAAGGTTGTGAAAGGtcat                                                                                                                          <  2:531347/170‑1 (MQ=255)                                                                                                                                                                                                                                                             gccagAAAAATTGAGCGTTTACGCACGTTATACCCGTCGTGGCGGTCTGGACATTAACCCGTGGCGCAGTAATAGCGATTTTGTCCCATCGACCACAAGACTGGTTCGGCAATAAATTTTTTCTCAATTTTGCGTGCTGGATTCACGCAGa                                                                                                                                           <  2:413032/151‑1 (MQ=255)                                                                                                                                                                                                                                                             gccagAAAAATTGAGCGTTTACGCACGTTATACCCGTCGTGGCGGTCTGGACATTAACCCGTGGCGCAGTAATAGCGATTTTGTCCCATCGACCACAAGACTGGTTCGGCAATAAATTTTTTCTCAATTTTGCGTGCTGGATTCACGCAGAAGGTTGTGAAAGGTCATcagg                                                                                                                      <  2:144125/172‑1 (MQ=255)                                                                                                                                                                                                                                                             gccagAAAAATTGAGCGTTTACGCACGTTATACCCGTCGTGGCGGTCTGGACATTAACCCGTGGCCCAGTAATAGCGATTTTGTCCCATCGACCACAAGACTGGTTCGGCAATAAATTTTTTCTCAATTTTGCGTGCTGGATTCACGCAGAAGGTTGTGAAAGGTCATcagg                                                                                                                      <  2:498486/172‑1 (MQ=255)                                                                                                                                                                                                                                                                   aaaaTTGAGaaaaaatttattgccgaaccagtcttgtggtcgatgggacaaaatcgctattactgcgccacgggttaatgtccagaccgccacgacgggtataacgtgcgtaaacgctcaatttttctggctggcagaagc                                                                                                                                               >  2:594428‑M1/1‑9 (MQ=255)                                                                                                                                                                                                                                                                       ttGAGaaaaaatttattgccgaaccagtcttgtggtcgatgggacaaaatcgctattactgcgccacgggttaatgtccagaccgccacgacgggtataacgtgcgtaaacgctcaatttttctggctggcagaagcgtaa                                                                                                                                           <  1:594437‑M1/141‑137 (MQ=255)                                                                                                                                                                                                                                                                           gaaaaaatttattgccgaaccagtcttgtggtcgatgggacaaaatcgctattactgcgacacgggttaatgtccagaccgccacgacgggtataacgtgcgtccacgctccatttttctggctgccagaagagtaacaggtccttaaagatgcgttccacgcactgttcgtggaactcgttgtgatgacggaatgagaccaggtaacgcagccgtcttccactgtcactttggcgtcaacgatcctgaatttggagcgaactccatatgtgga  >  2:123673‑M1/1‑1 (MQ=255)                                                                                                                                                                                                                                                                           |                                                                                                                                                                                                                                                                                  ATTCACTACTGACTATCTGGAGAATGCCACCTGTGGTGAAAAAGTAGTGGAAGAGACGCTTGTCAGCCACCTGCTGAAATCAAACTGCCTGATCACCCATCAACCAGATTGGGGTTCGCTCCAAATTCAGTATCGTGGACGCCAAATTGACAGAGAAAAACTGCTGCGTTACCTGGTCTCATTCCGTCATCACAACGAGTTCCACGAACAGTGCGTGGAACGCATCTTTAATGACCTGTTACGCTTCTGCCAGCCAGAAAAATTGAGCGTTTACGCACGTTATACCCGTCGTGGCGGTCTGGACATTAACCCGTGGCGCAGTAATAGCGATTTTGTCCCATCGACCACAAGACTGGTTCGGCAATAAATTTTTTCTCAATTTTGCGTGCTGGATTCACGCAGAAGGTTGTGAAAGGTCATCAGGCAGGGCTATTGTAATCAAAGGGAATGACGATATTCGTCCCATAAGGAGTTTTTCTTGATTACACATATTAGCCCGCTTGGCTCCATGGATATGTTGTCGCAGCTGGAAGTGGATAT  >  CP009273/2919189‑2919728

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.