New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP009273	= 2919455	51 (1.330)	9 (0.250)	5/296	NT	15.6%	coding (749/849 nt)	queF	7‑cyano‑7‑deazaguanine reductase (NADPH‑dependent)
	?	CP009273	= 2919562	49 (1.350)					intergenic (+7/‑105)	queF/ygdH	7‑cyano‑7‑deazaguanine reductase (NADPH‑dependent)/UPF0717 family protein

AACCAGATTGGGGTTCGCTCCAAATTCAGTATCGTGGACGCCAAATTGACAGAGAAAAACTGCTGCGTTACCTGGTCTCATTCCGTCATCACAACGAGTTCCACGAACAGTGCGTGGAACGCATCTTTAATGACCTGTTACGCTTCTGCCAGCCAGAAAAATTGAGCGTTTACGCACGTTATACCCGTCGTGGCGGTCTGGACATTAACCCGTGGCGCAGTAATAGCGATTTTGTCCCATCGACCACAAGACTGGTTCGGCAATAAATTTTTTCTCAATTTTGCGTGCTGGATTCACGCAGAAGGTTGTGAAAGGTCATCAGGCAGGGCTATTGTAATCAAAGGGAATGACGATATTCGTCCCATAAGGAGTTTTTCTTGATTACACATATTAGCCCGCTTGGCTCCATGGATATGTTGTCGCAGCTGGAAGTGGATATGCTTAAACGCACCGCCAGCAGCGACCTCTATCAACTGTTTCGCAACTGTTCACTTGCCGTACTGAACTCCGGTAGTTTGA  >  CP009273/2919290‑2919808                                                                                                                                                                                                                                                                                 |                                                                                                                                                                                                                                                       tccacatatggagttcgCTCCAAATTCAGGATCGTTGACGCCAAAGTGACAGTGGAAGACGGCTGCGTTACCTGGTCTCATTCCGTCATCACAACGAGTTCCACGAACAGTGCGTGGAACGCATCTTTAAGGACCTGTTACTCTTCTGGCAGCCAGAAAAATGGAGCGTGGACGCACGTTATACCCGTCGTGGCGGTCTGGACATTAACCCGTGTCGCAGTAATAGCGATTTTGTCCCATCGACCACAAGACTGGTTCGGCAATAAATTTTTTc                                                                                                                                                                                                                                                       >  2:123673‑M2/9‑273 (MQ=255)              ttCGCTCCAAATTCAGTATCGTGGACGCCAAATTGACAGAGAAAAACTGCTGCGTTACCTGGTCTCATTCCGTCATCACAACGAGTTCCACGAACAGTGCGTGGAACGCATCTTTAATGACCTGTTACGCTTCTGCCAGCCAGAAAAATTGAGCGTTTACGCACGTTATACCCGTCGTGGCGGTCTGGACATTAACCCGTGGCGCAGTAATAGCGATTTTGTCCCATCGACCACAAGACTGGTTCGGCAATAAATTTTTTCTCAATTTTGCGTGc                                                                                                                                                                                                                                         <  1:218720/275‑1 (MQ=255)                      aaaTTCAGTATCGTGGACGCCAAATTGACAGAGAAAAACTGCTGCGTTACCTGGTCTCATTCCGTCATCACAACGAGTTCCACGAACAGTGCGTGGAACGCATCTTTAATGACCTGTTACGCTTCTGCCAGCCAGAAAAATTGAGCGTTTACGCACGTTATACCCGTCGTGGCGGTCTGGACATTAACCCGTGGCGCAGTAATAGCGATTTTGTCCCATCGACCACAAGACTGGTTCGGCAATAAATTTTTTCTCAATTTTGCGTGCTGGAtt                                                                                                                                                                                                                                   <  1:48100/273‑1 (MQ=255)                              tATCGTGGACGCCAAATAGACAGAGACAAACTGTGGCGTGACCTGGTCTCATTACGTCATCACAACGAGTTCCGCGCACAGTGCGTGGAACACATCTTTAATGACCTGTTACGCTTCTGCCAGCAAGAAAAAATGAGCGTTTACGCACGTTATACCCGTCGTGGCGGTCTGGACATTAACCCGTGGCGCAGTAATAGCGATTTTGTCCCATCGACCACAAGACTGGTTCGGCAATAAATTTTTTCTCAATTTTGCGTGCTGGATTCACGCAGAAg                                                                                                                                                                                                                         <  2:303061/275‑1 (MQ=255)                                          cAAATTGACAGAGAAAAACTGCTGCGTTACCTGGTCTCATTCCGTCATCACAACGAGTTCCACGAACAGTGCGTGGAACGCATCTTTAATGACCTGTTACGCTTCTGCCAGCCAGAAAAATTGAGCGTTTACGCACGTTATACCCGTCGTGGCGGTCTGGACATTAACCCGTGGCGCAGTAATAGCGATTTTGTCCCATCGACCACAAGACTGGTTCGGCAATAAATTTTTTCTCAATTTTGCGTGCTGGATTCACGCAGAAGGTTGTGAAAGGt                                                                                                                                                                                                             >  1:659176/1‑275 (MQ=255)                                                   agagAAAAACTGCTGCGTTACCTGGTCTCATTCCGTCATCACAACGAGTTCCACGAACAGTGCGTGGAACGCATCTTTAATGACCTGTTACGCTTCTGCCAGCCAGAAAAATTGAGCGTTTACGCACGTTATACCCGTCGTGGCGGTCTGGACATTAACCCGTGGCGCAGTAATAGCGATTTTGTCCCATCGACCACAAGACTGGTTCGGCAATAAATTTTTTCTCAATTTTGCGTGCTGGATTCACGCAGAAGGTTGTGAAAGGTCATcagg                                                                                                                                                                                                      <  2:659167/273‑1 (MQ=255)                                                                     agacaggTCTCATTCCGTCATCCCAACGAGTTCCACGAACAGTGCCTGTAACGCATCTTTAATGACATGTTACGCTTCTGCCAGCCAGAAAAATTGAGCGTTTACGCACGTTATACCCGTCGTGGCGTTCTGGACATTAACCCGTGGCGCAGTAATAGCGATTTTGTCCCATCGACCACAAGACTGGTTCGGCAATAAATTTTTTCTCAATTTTGCGTGCTGGATTCACGCAGAAGGTTGTGAAAGGTCATCAGGCAGGGCTATTGTAATCaaa                                                                                                                                                                                   <  2:710689/269‑1 (MQ=255)                                                                                      tcatcaCAACAAGTTCCACGAACAGTGCGTGGAACGCATCTTTAATGACCTGTTACGCTTCTGCCAGCCAGAAAAATTGAGCGTTTACGCACGTTATACCCGTCGTGGCGGTCTGGACATTAACCCGTGGCGCAGTAATAGCGATTTTGTCCCATCGACCACAAGACTGGTTCGGCAATAAATTTTTTCTCAATTATGCGTGCTGGATTCACGCAGAAGGTTGTGAAAGGTCATCAGGCAGGGCTATTGTAATCAAAGGGAATGACGactgtcac                                                                                                                                                                 >  1:710699/1‑268 (MQ=255)                                                                                                   ttCCACGAACAGTGCGTGGAACGCATCTTTAATGACCTGTTACGCTTCTGCCAGCCAGAAAAATTGAGCGTTTACGCACGTTATACCCGTCGTGGCGGTCTGGACATTAACCCGTGGCGCAGTAATAGCGATTTTGTCCCATCGACCACAAGACTGGTTCGGCAATAAATTTTTTCTCAATTTTGCGTGCTGGATTCACGCAGAAGGTTGTAAAAGTTCATCAGGCAGGGCTATTGTAATCAAAGGGAATGACGATATTCTTCCCTTAAgaggtc                                                                                                                                                    >  2:159132/1‑270 (MQ=255)                                                                                                                gcttGGATCGCATTGTTAATGACTTTTTATGCGTCTGCCATCCAGAAAAATTGAGCTTTTACGCATGTTATACCCGTCGTGGCGGTCTGGACATTAACCCGTGGCGCAGTAATAGCGATTTTGTCCCATCGACCACAAGACTGGTTCGGCAATAAATTTGTTCTCAATTTTGCGTGCTGGATTCACGCAGAAGGTTGTGAAAGGTCATCAGGCAGGGCTATTGTAATCAAAGGGAATGACGATATTCGTCCCATAAGGAGTTTTTCTTGATTac                                                                                                                                        <  1:425091/271‑1 (MQ=255)                                                                                                                       aCGCATCTTTAATGACCTGTTACGCTTCTGCCAGCCAGAAAAATTGAGCGTTTACGCACGTTATACCCGTAGTGGCGGTCTGGACATTAACCCGTGGCGCAGTATTAGCGATTTTGTCCCATCGACCACAAGACTGGTTCGGCAATAAATTTTTTCTCAATTTTGCGTGGTGGATTCACGCAGAAGGTTTTGTAAGGTCATCAGACAGCACTATTGTACTCAAAGGGAATGGCGATATTCGGCCCATAAGTGGTTTTTCTTGATTAcacagttt                                                                                                                                 >  2:239677/1‑270 (MQ=255)                                                                                                                               ttAATGACCGGTTACGCTTCTGCCAGCCAGAAAAATTGAGCGTTTACGCACGTTATACCCGTCGTGGCGGTCTGGACATTAACCCGTGGCGCAGTAATAGCGATTTTGTCCCTTCNACCACAAGACGAATTCGGCAATTAATTTTTTCTCAATTTTGCGTGCTGGATTCACGCAGAAGGTTGTGAAAGGTCATCATGCAGTGCTATTGTAATCAAAGGGAATGACGATATTCGTCCCATAAGGAGTTTTTCTTGATTACACATATTAGCCCGCt                                                                                                                         <  1:657029/274‑1 (MQ=255)                                                                                                                                     aCCTGTTACGCTTCTGCCAGCCAGAAAAATTGAGCGTTTACGCACGTTATACCCGTCGTGGCGGTCTGGACATTAACCCGTGGCGCAGTAATAGCGATTTTGTCCCATCGACCACAAGACTGGTTCGGCAATAAATTTTTTCTCAATTTTGCGTGCTGGATTCACGCAGAAGGTTGTGAAAGGTCATCAGGCAGGGCTATTGTAATCaaa                                                                                                                                                                                   >  1:653373/1‑210 (MQ=255)                                                                                                                                       cTGTTACGCTTCTGCCAGCCAGAAAAATGGAGCGTTTACGCACGTTATACCCGTCGTGGCGGTCTGGACATTAACCCGTGGCGCAGTAATAGCGATTTTGTCCCATCGACCACAAGACTGGTTCGGCAATAAATTTTTTCTCAATTTTGCGTGCTGGATTCACGCAGAAGGTTGTGAAAGGTCNTCAGGCAGGGCTAt                                                                                                                                                                                             >  1:518957/1‑198 (MQ=255)                                                                                                                                        tGTTACGCTTCTGCCAGCCAGAAAAATTGAGCGTTTACGCACGTTATACCCGTCGTGGCGGTCTGGACATTAACCCGTGGCGCAGTAATAGCGATTTTGTCCCATCGACCACAAGACTGGTTCGGCAATAAATTTTTTCTCAATTTTGCGTGCTGGATTCACGCAGAAGGTTGTGAAAGGTCATCAGGCAGGGCTATTGTAATCAAAGGGAATGACGatat                                                                                                                                                                     >  2:72161/1‑221 (MQ=255)                                                                                                                                         gTTACGCTTCTGCCAGCCAGAAAAATTGAGCGTTTACGCACGTTATACCCGTCGTGGCGGTCTGGACATTAACCCGTGGCGCAGTAATAGCGATTTTGTCCCATCGACCACAAGACTGGTTCGGCAATAAATTTTTTCTCAATTTTGCGTGCTGGATTCACGCAGAAGGTTGTGAAAGGTCATCAGGCAGGGCTATTGTAATCAAAGGGa                                                                                                                                                                               <  2:653364/210‑1 (MQ=255)                                                                                                                                          ttACGCTTCTGCCAGCCAGAAAAATTGAGCGTTTACGCACGTTATACCCGTCGTGGCGGTCTGGACATTAACCCGTGGCGCAGTAATAGCGATTTTGTCCCATCGACCACAAGACTGGTTCGGCAATAAATTTTTTctcaa                                                                                                                                                                                                                                                   <  1:594437‑M2/141‑6 (MQ=255)                                                                                                                                            aCGCTTCTGCCAGCCAGAAAAATTGAGCGTTTACGCACGTTATACCCGTCGTGGCGGTCTGGACATTAACCCGTGGCGCAGTAATAGCGATTTTGTCCCATCGACCACAAGACTGGTTCGGCAATAAATTTTTTCTCAATTTTGCGTGCTGGATTCACGCAGAAGGTTGTGAAAGGTCATCAGGCAGGGCTATTGTAATCAAAGGGAATGACGATATTCGt                                                                                                                                                                 <  1:72162/221‑1 (MQ=255)                                                                                                                                              gCTTCTGCCAGCCAGAAAAATTGAGCGTTTACGCACGTTATACCCGTCGTGGCGGTCTGGACATTAACCCGTGGCGCAGTAATAGCGATTTTGTCCCATCGACCACAAGACTGGTTCGGCAATAAATTTTTTctcaatttt                                                                                                                                                                                                                                               >  2:594428‑M2/1‑132 (MQ=255)                                                                                                                                                  cTGCCAGCCAGAAAAATTGAGCGTTTACGCACGTTATACCCGTCGTGGCGGTCTGGACATTAACCCGTGGCGCAGTAATAGCGATTTTGTCCCATCGACCACAAGACTGGTTCGGCAATAACTTTTTTCTCAATTTTGCGTGCTGGATTCACGCAGAAGGTTGTGAAAGGTCATCAGTCAGGGCTATTGTAATCAAAGGGAATGACGATATTCGTCCCATAAGGAGTTTTTCTTGATTACACATATTATCACGCTTGGc                                                                                                                     >  2:514974/1‑259 (MQ=255)                                                                                                                                                  cTGCCAGCCAGAAAAATTGAGCGTTTACGCACGTTATACCCGTCGTGGCGGTCTGGACATTAACCCGTGGCGCAGTAATAGCGATTTTGTCCCATCGACCACAAGACTGGTTCGGCAATAAATTTTTTCTCAATTTTGCGTGCTGGATTCACGCAGAAGGTTGTGAAAgg                                                                                                                                                                                                              >  1:531355/1‑170 (MQ=255)                                                                                                                                                    gccagccaGAAAAATTGAGCGTTTACGCACGTTATACCCGTCGTGGCGGTCTGGACATTAACCCGTGGCGCAGTAATAGCGATTTTGTCCCATCGACCACAAGACTGGTTCGGCAATAAATTTTTTCTCAATTTTGCGTGCTGGATTCACg                                                                                                                                                                                                                               >  1:413039/1‑151 (MQ=255)                                                                                                                                                    gccagccaGAAAAATTGAGCGTTTACGCACGTTATACCCGTCGTGGCGGTCTGGACATTAACCCGTGGCGCAGTAATAGCGATTTTGTCCCATCGACCACAAGACTGGTTCGGCAATAAATTTTTTCTCAATTTTGCGTGCTGGATTCACGCAGAAGGTTGTGAAAGGtcat                                                                                                                                                                                                          >  1:144126/1‑172 (MQ=255)                                                                                                                                                    gccagccaGAAAAATTGAGCGTTCACGCACGTTATACCCGTCGTGGCGGTCTGGACATTAACCCGTGGCCCAGTAATAGCGATTTTGTCCCATCGACCACAAGACTGGTTCGGCAATAAATTTTTTCTCAATTTTGCGTGCTGGATTCACGCAGAAGGTTGTGAAAGGtcat                                                                                                                                                                                                          >  1:498493/1‑172 (MQ=255)                                                                                                                                                      cagcgagAAAAATTGAGCGTTTACGCACGTTATACCCGGCGTGGCGGTCTGGACATTAACCCGTGGCGCAGTAATNGCGATTTTGTCCCATCGACCACAAGACTGGTTCGGCAATAAATTTTTTCTCAATTTTGCGTGCTGGATTCACGCAGAAGGTTGTGAAAGGTCATCAGGCAGGGCTATTGTAATCAAAGGGAATGACGATATTCGTCCCATAAGGAGTTTTTCTTCATTACACATATTAGCCCGCTTGGCTCCa                                                                                                                 <  1:514981/259‑1 (MQ=255)                                                                                                                                                      cagccagAAAAATTGAGCGTTTACGCACGTTATACCCGTCGTGGCGGTCTGGACATTAACCCGTGGCGCAGTAATAGCGATTTTGTCCCATCGACCACAAGACTGGTTCGGCAATAAATTTTTTCTCAATTTTGCGTGCTGGATTCACGCAGAAGGTTGTGAAAGGtcat                                                                                                                                                                                                          <  2:531347/170‑1 (MQ=255)                                                                                                                                                        gccagAAAAATTGAGCGTTTACGCACGTTATACCCGTCGTGGCGGTCTGGACATTAACCCGTGGCGCAGTAATAGCGATTTTGTCCCATCGACCACAAGACTGGTTCGGCAATAAATTTTTTCTCAATTTTGCGTGCTGGATTCACGCAGa                                                                                                                                                                                                                           <  2:413032/151‑1 (MQ=255)                                                                                                                                                        gccagAAAAATTGAGCGTTTACGCACGTTATACCCGTCGTGGCGGTCTGGACATTAACCCGTGGCGCAGTAATAGCGATTTTGTCCCATCGACCACAAGACTGGTTCGGCAATAAATTTTTTCTCAATTTTGCGTGCTGGATTCACGCAGAAGGTTGTGAAAGGTCATcagg                                                                                                                                                                                                      <  2:144125/172‑1 (MQ=255)                                                                                                                                                        gccagAAAAATTGAGCGTTTACGCACGTTATACCCGTCGTGGCGGTCTGGACATTAACCCGTGGCCCAGTAATAGCGATTTTGTCCCATCGACCACAAGACTGGTTCGGCAATAAATTTTTTCTCAATTTTGCGTGCTGGATTCACGCAGAAGGTTGTGAAAGGTCATcagg                                                                                                                                                                                                      <  2:498486/172‑1 (MQ=255)                                                                                                                                                                                 cGTTATACCCGTCGTGGCGGTCTGGACATTAACCCGTGGCGCAGTAATAGCGATTTTGTCCCCTCGACCACAAGACTGGTTCGGCAATAAATTTTTTctcaatttttctggctggcagaagcgtaacaggtcattaaagatgcgttccacgcactgttcgtggaactctttttgatgacggaatgacaccaggtaac                                                                                                                                                    <  2:342617‑M2/197‑101 (MQ=255)                                                                                                                                                                                 cGTTATACCCGTCGTGGCGGTCTGGACATTAACCCGTGGCGCAGTAATAGCGATTTTGTCCCATCGACCACAAGACTGGTTCGGCAATAAATTTTTTctcaatttttctggctggcagaagcgtaacaggtcattaaagatgcgttccacgcactgttcgtggaactcgttgtgatgacggaatgagaccaggtaacgcagcagtt                                                                                                                                           <  2:524853‑M2/206‑110 (MQ=255)                                                                                                                                                                                 cGTTATACCCGTCGTGGCGGTCTGGACATTAACCCGTGGCGCAGTAATAGCGATTTTGTCCCATCGACCACAAGACTGGTTCGGCAATAAATTTTTTctcaatttttctggctgg                                                                                                                                                                                                                                      <  1:564189‑M2/115‑19 (MQ=255)                                                                                                                                                                                 cGTTATACCCGTCGTGGCGGTCTGGACATTAACCCGTGGCGCAGTAATAGCGATTTTGTCCCATCGACCACAAGACTG‑TTCGGCAATAAATTTTTTctcaatttttctggctggcagaagcgtaacaggtcattaaag                                                                                                                                                                                                              <  2:7319‑M2/138‑43 (MQ=255)                                                                                                                                                                                 cGTTATACCCGTCGTGGCGGGCTGGACATTAACCCGTGGCGCCGTAATAGCGATTTTGTCCCATCGACCACAAGACTGGTTCGGCAATAAATTTTTTctcaatttttctggctggcagaagcgtaacaggtcattaaagatgcgttccacgcactgttcgtggaacacgttgtgagtacggaattagaccaggtaccccagcagttcttctctgacaatttggcgtccacggtagcgaaataggagcgaaccctactcttgtcgttgggttttcc                                                                      <  2:238675‑M2/275‑179 (MQ=255)                                                                                                                                                                                     ataCCCGTCGTGTCGGTCTGGACATTAACCCGTGGCGCAGTAATAGCGATTTTGTCCCATCGACCACAAGACTGGTTCGGCAATAAATTTTTTctcaatttttctggctggcagaagcgtaacaggtcattaaagatgcgttccacgcactgttcgtggaactcgttgtgatgacggaatgagaccaggtaacgcag                                                                                                                                                >  1:342623‑M2/1‑93 (MQ=255)                                                                                                                                                                                     ataCCCGTCGTGGCGGTCTGGACATTAACCCGTGGCGCAGTAATAGCGATTTTGTCCCATCGACCACAAGACTGGTTCGGCAATAAATTTTTTctcaatttttctggctggcagaagcgtaacaggtcattaaagatgcgttccacgcactgttcgtggaactcgttgtgatgacggaatgagaccaggtaacgcagcagtttttc                                                                                                                                       >  1:524860‑M2/1‑93 (MQ=255)                                                                                                                                                                                     ataCCCGTCGTGGCGGTCTGGACATTAACCCGTGGCGCAGTAATAGCGATTTTGTCCCATCGACCACAAGACTGGTTCGGCAATAAATTTTTTctcaatttttctggctggcaga                                                                                                                                                                                                                                  >  2:564180‑M2/1‑93 (MQ=255)                                                                                                                                                                                     ataCCCGTCGTGGCGGTCTGGACATTAACCCGTGGCGCAGTAATAGCGATTTTGTCCCATCGACCACAAGACTG‑TTCGGCAATAAATTTTTTctcaatttttctggctggcagaagcgtaacaggtcattaaagatgc                                                                                                                                                                                                          >  1:7319‑M2/1‑92 (MQ=255)                                                                                                                                                                                            tcgtGGCGGTCTGGACATTAACCCGTGGCGCAGTAATAGCGATTTTGTCCCATCGACCACAAGACTGGTTCGGCAATAAATTTTTTCTCAATTTTGCGTGCTGGATTCACGCAGAAGGTTGTGAAAGGtcat                                                                                                                                                                                                          >  2:314075/1‑132 (MQ=255)                                                                                                                                                                                            tcgtGGCGGTCTGGACATTAACCCGTGGCGCAGTAATAGCGATTTTGTCCCATCGACCACAAGACTGGTTCGGCAATAAATTTTTTCTCAATTTTGCGTGCTGGATTCACGCAGAAGGTTGTGAAAGGTCATCAGGCAGGGc                                                                                                                                                                                                >  1:616944/1‑142 (MQ=255)                                                                                                                                                                                            tcgtGGCGGTCTGGACATTAACCCGTGGCGCAGTAATAGCGATTTTGTCCCATCGACCACAAGACTGGTTCGGCAATAAATTTTTTCTCAATTTTGCGTGCTGGATTCACGCAGAAGGTTGTGAAAGGTCATCAGGCAGGGCTATTGTAATCAAAGGGAATGACGATATTCGTCCCATAAGGAGTTGTTCTTGATTACACATATTAGCCCGCTTGGCTCCATGGATATGTTGTCGCAGCTGGAAGTGGATATGCTTAAACGCACCGCcagc                                                               >  1:4845/1‑271 (MQ=255)                                                                                                                                                                                                ggCGGTCTGGACATTAACCCGTGGCGCAGTAATAGCGATTTTGTCCCATCGACCACAAGACTGGTTCGGCAATAAATTTTTTCTCAATTTTGCGTGCTGGATTCACGCAGAAGGTTGTGAAAGGTCATcagg                                                                                                                                                                                                      <  1:314081/132‑1 (MQ=255)                                                                                                                                                                                                ggCGGTCTGGACATTAACCCGTGGCGCAGTAATAGCGATTTTGTCCCATCGACCACAAGACTGGTTCGGCAATAAATTTTTTCTCAATTTTGCGTGCTGGATTCACGCAGAAGGTTGTGAAAGGTCATCAGGCAGGGCTAtt                                                                                                                                                                                            <  2:616935/142‑1 (MQ=255)                                                                                                                                                                                                     tCTGGACATTAACCCGTGGCGCAGTAATAGCGATTTTGTCCCATCGACCACAAGACTGGTTCGGCAATAAATTTTTTCTCAATTTTGCGTGCTGGATTCACGCAGAAGGTTGTGAAAGGTCATCAGGCAGGGCTATTGTAATCAAAGGGGATGACGATATTCGTCCCATAAGGAGTTTTTCTTGATTACACATATTAGCCCGCTTGGCTCCATGGATATGTTGTCGCAGCTGGAAGTGGATATGCTTAAACGCACCGCCAGCAGCGACCTCTa                                                    >  1:579259/1‑273 (MQ=255)                                                                                                                                                                                                                     tGGCGCAGTAATAGCGATTTTGTCCCATCGACCACAAGACTGGTTCGGCAATAAATTTTTTCTCAATTTTGCGTGCTGGATTCACGCAGAAGGTTGTGAAAGGTCATCAGGCAGGGCTATTGTAATCAAAGGGAATGACGATATTCGTCCCATAAGGAGTTTTTCTTGAt                                                                                                                                           >  2:284893/1‑170 (MQ=255)                                                                                                                                                                                                                         gcAGTAATAGCGATTTTGTCCCATCGACCACAAGACTGGTTCGGCAATAAATTTTTTCTCAATTTTGCGTGCTGGATTCACGCAGAAGGTTGTGAAAGGTCATCAGGCAGGGCTATTGTAATCAAAGGGAATGACGATATTCGTCCCATAAGGAGTTTTTCTTGATTaca                                                                                                                                       <  1:284898/170‑1 (MQ=255)                                                                                                                                                                                                                            gTAATAGCGATTTTGTCCCATCGACCACAAGACTGGTTCGGCAATAAATTTTTTCTCAATTTTGCGTGCTGGATTCACGCAGAAGGTTGTGAAAGGtcat                                                                                                                                                                                                          >  2:260574/1‑100 (MQ=255)                                                                                                                                                                                                                                tAGCGATTTTGTCCCATCGACCACAAGACTGGTTCGGCAATAAATTTTTTCTCAATTTTGCGTGCTGGATTCACGCAGAAGGTTGTGAAAGGTCATcagg                                                                                                                                                                                                      <  1:260579/100‑1 (MQ=255)                                                                                                                                                                                                                                       tttGTCCCATCGTCTACAAGACTGGTTCGGTAATAAATTTTTTCTTAATTTTTCGTGCTGGCTTCACGCAGAAGGTTGTGAAAGGTCATCAGGCAGGTCTATTGTAATCAAAGGGAATGACGATATTCGTCCCATAATGAGTTTTTCTTGATTACACATATTAGCCCGCTTGGCTCCATGGATATGTTGTCGCAGCTGGAAGTGGATATGCTTAAACGCACCGCCAGCAGCGACCTCTATCAACTGTTTCGCAACTGTTCACTTGCCGTACTGaa                <  1:49330/275‑1 (MQ=255)                                                                                                                                                                                                                                          gTCCCATCGACCACAAGACTGGTTCGGCAATAAATTTTTTCTCAATTTTGCGTGCTGGATTCACGCAGAAGGTTGTGAAAGGtcat                                                                                                                                                                                                          >  2:250498/1‑86 (MQ=255)                                                                                                                                                                                                                                              cATCGACCACAAGACTGGTTCGGCAATAAATTTTTTCTCAATTTTGCGTGCTGGATTCACGCAGAAGGTTGTGAAAGGTCATcagg                                                                                                                                                                                                      <  1:250503/86‑1 (MQ=255)                                                                                                                                                                                                                                                tCGACCACAAGACTGGTTCGGCAATAAATTTTTTCTCAATTTTGCGTGCTGGATTCACGCAGAAGGTTGTGAAAGGtcat                                                                                                                                                                                                          >  1:221467/1‑80 (MQ=255)                                                                                                                                                                                                                                                    ccACAAGACTGGTTCGGCAATAAATTTTTTCTCAATTTTGCGTGCTGGATTCACGCAGAAGGTTGTGAAAGGTCATcagg                                                                                                                                                                                                      <  2:221462/80‑1 (MQ=255)                                                                                                                                                                                                                                                     cataaGACTGGTTCGGCAATAAATTTTTTATCAAGTTTGCGTGCTGGATTCACGCAGAAGGGTGTGAAAGGTCATCAGGCAGGGCTATTGTAATCAAAGGGAATGACGATATTCGTCCCATAAGGAGTTTTTCTTGATTACACATATTAGCCCGCTTGGCTCCATGGATATGTTGTCGCAGCTGGAAGTGGATATGCTTAAACGCACCGCCAGCAGCGACCTCTATCAACTGTTTCGCAACTGTTCACTTGCCGTACTGAACTCCGGTAGTTTGa  <  1:151498/272‑1 (MQ=255)                                                                                                                                                                                                                                                              ggTTCGGCAATAAATTTTTTCTCAATTTTGCGTGCTGGATTCACGCAGAAGGTTGTGAAAGGTCATCAGGCAGGGCTATTGTAATCAAAGGGAATGACGATATTCGTCCCATAAGGAGTTTTTc                                                                                                                                                >  2:535721/1‑124 (MQ=255)                                                                                                                                                                                                                                                               gTTCGGCAATAAATTTTTTCTCAATTTTGCGTGCTGGATTCACGCAGAAGGTTGTGAAAGGTCATcaggca                                                                                                                                                                                                    >  2:102157/1‑71 (MQ=255)                                                                                                                                                                                                                                                                  cGGCAATAAATTTTTTCTCAATTTTGCGTGCTGGATTCACGCAGAAGGTTGTGAAAGGTCATCAGGCAGGGCTATTGTAATCAAAGGGAATGACGATATTCGTCCCATAAGGAGTTTTTCTTGa                                                                                                                                            <  1:535729/124‑1 (MQ=255)                                                                                                                                                                                                                                                                  cGGCAATAAATTTTTTCTCAATTTTGCGTGCTGGATTCACGCAGAAGGTTGTGAAAGGTCATCAGGCAGGGCTATTGTAATCAAAGGGAATGACGATATTCGTCCCATAAGGAGTTTTTCTTGATTACACATATTAGCCCGCTTGGCTCCATGGATATGTTGTCGCAGCTGGAAGTGGATATGCTTAAACGCACCGCCagcagc                                                            >  1:257981/1‑204 (MQ=255)                                                                                                                                                                                                                                                                   ggCAATAAATTTTTTCTCAATTTTGCGTGCTGGATTCACGCAGAAGGTTGTGAAAGGTCATCAGGCAGGGc                                                                                                                                                                                                <  1:102158/71‑1 (MQ=255)                                                                                                                                                                                                                                                                      aaTAAATTTTTTCTCAATTTTGCGTGCTGGATTCACGCAGAAGGTTGTGAAAGGTCATCAGGCAGGGCTATTGTAATCAAAGGGAATGACGATATTCGTCCCATAAGGAGTTTTTCTTGATTACACATATTAGCCCGCTTGGCTCCATGGATATGTTGTCGCAGCTGGAAGTGGATATGCTTAAACGCACCGCCAGCAGCGAcc                                                        <  2:257976/204‑1 (MQ=255)                                                                                                                                                                                                                                                                         aaaTTTTTTCTCACTTTTGCGAGCTGGATTCACGCCGAAGGTTGTGAAAGGTCATCAGGCAGGGCTATTGTAATCAAAg                                                                                                                                                                                  >  1:368787/1‑79 (MQ=255)                                                                                                                                                                                                                                                                             tttttCTCGATTTTGCGTGCTGGATTCACGCAGAAGGTTGTGAAAGGTCATCAGGCAGGGCTATTGTAATCAAAGGGaa                                                                                                                                                                              <  2:368781/79‑1 (MQ=255)                                                                                                                                                                                                                                                                                 |                                                                                                                                                                                                                                                       AACCAGATTGGGGTTCGCTCCAAATTCAGTATCGTGGACGCCAAATTGACAGAGAAAAACTGCTGCGTTACCTGGTCTCATTCCGTCATCACAACGAGTTCCACGAACAGTGCGTGGAACGCATCTTTAATGACCTGTTACGCTTCTGCCAGCCAGAAAAATTGAGCGTTTACGCACGTTATACCCGTCGTGGCGGTCTGGACATTAACCCGTGGCGCAGTAATAGCGATTTTGTCCCATCGACCACAAGACTGGTTCGGCAATAAATTTTTTCTCAATTTTGCGTGCTGGATTCACGCAGAAGGTTGTGAAAGGTCATCAGGCAGGGCTATTGTAATCAAAGGGAATGACGATATTCGTCCCATAAGGAGTTTTTCTTGATTACACATATTAGCCCGCTTGGCTCCATGGATATGTTGTCGCAGCTGGAAGTGGATATGCTTAAACGCACCGCCAGCAGCGACCTCTATCAACTGTTTCGCAACTGTTCACTTGCCGTACTGAACTCCGGTAGTTTGA  >  CP009273/2919290‑2919808

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.