New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP009273	= 3122383	72 (1.870)	6 (0.170)	5/292	NT	8.3%	coding (753/765 nt)	glcC	glycolate‑inducible glc operon transcriptional repressor; autorepressor
	?	CP009273	= 3122500	66 (1.850)					pseudogene (1003/1101 nt)	yghO	pseudogene, DNA‑binding transcriptional regulator homology

CTCACAATCAGGTGCTGGTGTTTACGCTGCAATCATTGACCGATCTGATGTTTAATTCAGTGTTTGCCAGCGTAAATAATCTCTACCATCGACCACAGCAAAAAAAGCAGATCGATCGCCAGCATGCGCGGATCTACAACGCGGTGTTGCAGCGGCTGCCGCACGTCGCCCAGCGCGCAGCACGCGATCATGTGCGGACCGTGAAAAAGAATCTCCACGATATCGAGCTGGAAGGCCACCATTTGATTCGCTCGGCGGTGCCGCTGGAGATGAACCTGAGTTAGCTGGTATTAAATCTGCTTTTCATACAATCGGTAACGCTTGTACGGCTCCGCCCCAATGCGTTCCAGCATGTTATTCATGCCTGTATTGGTTTCGAGGATCCATGACATCTCCAGCGCATCGATCTTCCGGCGGGCAAACGGATCGCGTAAGGCTTCAATCAATAACAGCGCAATCACCGGGCCGATGCGGCTGAACTGATACTCGTCGCGCACGCCCATCAGCGGTACTCGCGCAGTTCGCACACCGCTGAC  >  CP009273/3122112‑3122647                                                                                                                                                                                                                                                                                |                                                                                                                                                                                                                                                                         attccaATCAGGTGCTGGTGTTTACGCTGCAATCATTGTCCGATCTGATTTTTAATTCAGTGTTTGCCAGCTTAAATAATCTCTACCATCGACCACAGCAAAAAAAGCAGATCGATCGCCAGCATGCGCGGATCTACAACGCGGTGTTGCAGCGGCTGCCGCACGTCGCCCAGCGCGCAGCACGCGATCATGTGCGGACCGTGAAAAAGAATCTCCACGATATCGAGCTGGAAGGCCACCATTTGATTCGCTCGGCGGTGCCGCTGGAGATGAAc                                                                                                                                                                                                                                                                       <  2:196762/271‑1 (MQ=255)            gTGCTGGTGTTTCAACTCAACTCCTTTACCGATCTTATGTTTAATTTAGTGTTTGCCAGCGTAAATAATCTCTACCATCGACCACAGCAAAAAAAGCAGATCCATCGCCAGCATGCGCGGATCTACCACGCGGTGTTGCAGCGGCTGCCGCACGTCGCCCAGCGCGCAGCACGCGATCATGTGCGGACCGTGAAAAAGAATCTCCACGATATCGAGCTGGAAGGCCACCATTTGATTCGCTCGGCGGTGCCGCTGGAGATGAACCTGAGTTAGCt                                                                                                                                                                                                                                                            <  2:722306/275‑1 (MQ=255)               gtGGTTTTTACGCTCAAATCATTGNCCGATCTGATGTTTAATGCAGTGTTTGCCAGCGTAAATAATCTCTACCATCGACCACAGCAAAAAAAGCAGATCGATCGCCAGCATGCGCGGATCTACAACGCGGTGTTGCAGCGGCTGCCGCACGTCGCCCAGCGCGCAGCACGCGATCATGTGCGGACCGTGAAAAAGAATCTCCACGATATCGAGCTGGAAGGCCACCATTTGATTCGCTCGGCGGTGCCGCTGGAGATGAACCTGAGTTAGCTGGt                                                                                                                                                                                                                                                         <  2:412949/274‑1 (MQ=255)                                           aTCTGATGTTTAATTCAGTGTTTGCCAGCGTAAATAATCTCTACCATCGACCACAGCAAAAAAAGCAGATCGATCGCCAGCATGCGCGGATCTACAACGCGGTGTTGCAGCGGCTGCCGCACGTCGCCCAGCGCGCAGCACGCGATCATGTGCGGACCGTGAAAAAGAATCTCCACGATATCGAGCTGGAAGGCCACCATTTGATTCGCTCGGCGGTGCCGCTGGAGATGAACCTGAGTGCGCTGGTATGAAATCTGCTTTTCCTAAAATc                                                                                                                                                                                                                                 >  2:117318/1‑271 (MQ=255)                                                      aaTTCAGTGTTTGCCAGCGTAAATAATCTCTACCATCGACCACAGCAAAAAAAGCAGATCGATCGCCAGCATGCGCGGATCTACAACGCGGTGTTGCAGCGGCTGCCGCACGTCGCCCAGCGCGCAGCACGCGATCATGTGCGGACCGTGAAAAAGAATCTCCACGATATCGAGCTGGAAGGCCACCATTTGATTCGCTCGGCGGTGCCGCTGGAGATGAACCTGAGTTAGCTGGTATTAAATCTGCTTTTCATACAATCgg                                                                                                                                                                                                                               >  2:152325/1‑262 (MQ=255)                                                          cAGTGTTTGCCAGCGTAAATAATCTCTACCATCGACCACAGCAAAAAAAGCAGATCGATCGCCAGCATGCGCGGATCTACAACGCGGTGTTGCAGCGGCTGCCGCACGTCGCCCAGCGCGCAGCACGCGATCATGTGCGGACCGTGAAAAAGAATCTCCACGATATCGAGCTGGAAGGCCACCATTTGATTCGCTCGGCGGTGCCGCTGGAGATGAACCTGAGTTAGCTGGTATTAAATCTGCTTTTCATACAATCGGTAAc                                                                                                                                                                                                                           <  1:152328/262‑1 (MQ=255)                                                                       cGTAAATAATCTCTACCATCGACCACAGCAAAAAAAGCAGATCGATCGCCAGCATGCGCGGATCTACAACGCGGTGTTGCAGCGGCTGCCGCACGTCGCCCAGCGCGCAGCACGCGATCATGTGCGGACCGTGAAAAAGAATCTCCACGATATCGAGCTGGAAGGCCACCATTTGATTCGCTCGGCGGTGCCGCTGGAGCTGAACCTGAGTTAGCTGGTATTAAATCTGCTTTTCATACAATCGGTAACGCTTGTACGGCTCCTCCCCAATGCg                                                                                                                                                                                                  >  1:690187/1‑274 (MQ=255)                                                                                       cATCGACCACAGCAAAAAAAGCAGCTCGATCGCCAGCAGGCGCGGAGCTACAACGCGGTGTGGCGGCGGCTGCCGCACGTCGCCCAGCGCGCAGCACGCGATCATGTGCGGACCGTGAAAAAGAATCTCCACGATATCGAGCTGGAAGGCCACCATTTGATTCGCTCGGCGGTGCCGCTGGAGATGaa                                                                                                                                                                                                                                                                        <  2:89508/188‑1 (MQ=255)                                                                                         tCGACCACAGCAAAAAAAGCAGATCGATCGCCAGCATGCGCGGATCTACAACGCGGTGTTGCAGCGGCTGCCGCACGTCGCCCAGCGCGCAGCACGCGATCATGTGCGGACCGTGAAAAAGAATCCCCACGATATCGAGCTGGACGGCCAACATTTGCTTCGCTCGGCGGTGCCGTTGGAGATGCACCTGAGTTAGCTGGTATTAAATCTGCTGTTCATCCAAACGGTAACGCTTGTCCGGCTCCGCCCCAATGCGTTCCAGCTTGTTCTTCATg                                                                                                                                                                               >  2:9215/1‑275 (MQ=255)                                                                                                   cAAAAAAAGCAGATCGATCGCCAGCATGCGCGGATCTACAACGCGGTGTTGCAGCGGCTGCCGCACGTCGCCCAGCGCGCAGCACGCGATCATGTGCGGACCGTGAAAAAGAATCTCCACGATATCGAGCTGGAAGGCCACCATTTGATTCGCTCGGCGGTGCCGCTGGAGATGAACCTGAGTTAGCTGGTATTAAATCTGCTTTTCATACAATCGGTAACGCTTGTACGGCTCCGCCCCAATGCGTTCCAGCATGTTATTCATGCCTGTa                                                                                                                                                                         >  2:719485/1‑271 (MQ=255)                                                                                                   cAAAAAAAGCAGATCGATCGCCAGCATGCGCGGATCTACAACGCGGTGTTGCAGCGGCTGCCGCACGTCGCCCAGCGCGCAGCACGCGATCATGTGCGGACCGTGAAAAAGAATCTCCACGATATCGAGCTGGAAGGCCACCATTTGATTCGCTCGGCGGTGCCGCTGGAGATGAACCTGAGTTAGCTGGTATTAAATCTGCTTTTCATACAATCGGTAACGCTTGTACGGCTCCGCCCCAATGCGTTCCAGCATGTTATTCATGCCTGTa                                                                                                                                                                         <  1:719495/271‑1 (MQ=255)                                                                                                   cAAAAAAAGCAGATCGATCGCCAGCATGCGCGGATCTACAACGCGGTGTTGCAGCGGCTGCCGCACGTCGCCCAGCGCGCAGCACGCGATCATGTGCGGACCGTGAAAAAGAATCTCCACGATATCGAGCTGGAAGGCCACCATTTGATTCGCTCGGCGGTGCCGCTGGAGATGAACCTGAGTTAGCTGGTATTAAATCTGCTTTTCATACAATCGGTAACGCTTGTACGGCTCCGCCCCAATGCGTTCCAGCAGGTTCTTCATGCCTGTTTTgg                                                                                                                                                                     >  2:246650/1‑275 (MQ=255)                                                                                                            cAGATCGATCGCCAGCATGCGCGGATCTACAACGCGGTGTTGCAGCGGCTGCCGCACGTCGCCCAGCGCGCAGCACGCGATCATGTGCGGACCGTGAAAAAGAATCTCCACGATATCGAGCTGGAAGGCCACCATTTGATTCGCTCGGCGGTGCCGCTGGAGATGAACCTGAGTTAGCTGGTATTAAATCTGCTTTTCATACAATCGGTAACGCTTGTACGGCTCCGCCCCAATGCGTTCCAGCATGTTATTCATGCCTGTATTGGTTTCGAGGa                                                                                                                                                            <  1:117319/275‑1 (MQ=255)                                                                                                              gatcgatcGCCAGCATGCGCGGATCTACAACGCGGTGTTGCAGCGGCTGCCGCACGTCGCCCAGCGCGCAGCACGCGATCATGTGCGGACCGTGAAAAAGAATCTCCACGATATCGAGCTGGAAGGCCACCATTTGATTCGCTCGGCGGTGCCGCTGGAGATGAACCTGAGt                                                                                                                                                                                                                                                                 >  1:97611/1‑172 (MQ=255)                                                                                                                  gatcgCCAGCATGCGCGGATCTACAACGCGGTGTTGCAGCGGCTGCCGCACGTCGCCCAGCGCGCAGCACGCGATCATGTGCGGACCGTGAAAAAGAATCTCCACGATATCGAGCTGGAAGGCCACCATTTGATTCGCTCGGCGGTGCCGCTGGAGATGAACCTGAGTTAGc                                                                                                                                                                                                                                                             <  2:97610/172‑1 (MQ=255)                                                                                                                         aGCATGCGCGGATCTACAACGCGGTGTTGCAGCGGCTGCCGCACGTCGCCCAGCGCGCAGCACGCGATCATGTGCGGACCGTGAAAAAGAATCTCCACGATATCGAGCTGGAAGGCCACCATTTGATTCGCTCGGCGGTGCCGCTGGAGATGtcatggatcctcgaaaccaatacaggcatgaataacatgctggaacgcattggggcggagccgtac                                                                                                                                                                                                        >  2:544390‑M1/1‑152 (MQ=255)                                                                                                                             tGCGCGGATCTACAACGCGGTGTTGCAGCGGCTGCCGCACGTCGCCCAGCGCGCAGCACGCGATCATGTGCGGACCGTGAAAAAGAATCTCCACGATATCGAGCTGGAAGGCCACCATTTGATTCGCTCGGCGGTGCCGCTGGAGATGtcatggatcctcgaaaccaatacaggcatgaataacatgctggaacgcattggggcggagccgtacaagc                                                                                                                                                                                                    <  1:544399‑M1/218‑71 (MQ=255)                                                                                                                             tGCGCGGATCTACAACGCGGTGTTGCAGCGGCTGCCGCACGTCGCCCAGCGCGCAGCACGCGATCATGTGCGGACCGTGAAAAAGAATCTCCACGATATCGAGCTGGAAGGCCACCATTTGATTCGCTCGGCGGTGCCGCTGGAGATGtcatggatcctcgaaaccaatacaggcatgaataacatgctggaacgcattggggc                                                                                                                                                                                                                  >  1:9338‑M1/1‑148 (MQ=255)                                                                                                                              gcgcGGATCTACAACGCGGTGTTGCAGCGGCTGCCGCACGTCGCCCAGCGCGCAGCACGCGATCATGTGCGGACCGTGAAAAAGAATCTCCACGATATCGAGCTGGAAGGCCACCATTTGATTCGCTCGGCGGTGCCGCTGGAGATGAACCTGAGTTAGCTGGTATTAAATCTGCTTTTCATACAATCGGTAACGCt                                                                                                                                                                                                                        >  1:418066/1‑197 (MQ=255)                                                                                                                              gcgcGGATCTACAAAGCGGTGTTGCAGCGGCTGACGCACGTCGCCCAGCGCGCAGCACGCGATCATGTGCGGACCGTGAAAAAGAATCTCCACGAAATCGAGCTGGAAGGCCACCATTTGATTCGCTCGGCGGTGCCGCTGGAGATGAACCTGAGTTAGCTGGTATTAAATCTGCTTTTCATACAATCGGTAACGCTTGTACGGCTTCGCCCCAATGCGTTCCAGCATGTTATTCCTGCCCGTATTGGTTTCGAGGCTCCATGAcatctccagc                                                                                                                                           <  1:194391‑M2/274‑11 (MQ=255)                                                                                                                               cgcgGATCTACAACGCGGTGTTGCAGCGGCTGCCGCACGTCGCCCAGCGCGCAGCACGCGATCATGTGCGGACCGTGAAAAAGAATCTCCACGATATCGAGCTGGAAGGCCACCATTTGATTCGCTCGGCGGTGCCGCTGGAGATGAACCTGAGtt                                                                                                                                                                                                                                                                >  1:301637/1‑156 (MQ=255)                                                                                                                                 cgGATCTACAACGCGGTGTTGCAGCGGCTGCCGCACGTCGCCCAGCGCGCAGCACGCGATCATGTGCGGACCGTGAAAAAGAATCTCCACGATATCGAGCTGGAAGGCCACCATTTGATTCGCTCGGCGGTGCCGCTGGAGATGtcatggatcctcgaaaccaatacaggcatgaataacatgctggaacgcattggggcggag                                                                                                                                                                                                              <  2:9338‑M1/204‑61 (MQ=255)                                                                                                                                  ggATCTACAACGCGGTGTTGCAGCGGCTGCCGCACGTCGCCCAGCGCGCAGCACGCGATCATGTGCGGACCGTGAAAAAGAATCTCCACGATATCGAGCTGGAAGGCCACCATTTGATTCGCTCGGCGGTGCCGCTGGAGATGAACCTGAGTTAGCTGGTATTAAATCTGCTTTTCATACAATCGGTAACGCTTGTa                                                                                                                                                                                                                    <  2:418059/197‑1 (MQ=255)                                                                                                                                   gATCTACAACGCGGTGTTGCAGCGGCTGCCGCACGTCGCCCAGCGCGCAGCACGCGATCATGTGCGGACCGTGAAAAAGAATCTCCACGATATCGAGCTGGAAGGCCACCATTTGATTCGCTCGGCGGTGCCGCTGGAGATGAACCTGAGTTAGCt                                                                                                                                                                                                                                                            <  2:301631/156‑1 (MQ=255)                                                                                                                                   gATCTACAACGCGGTGTGGCAGCGGCTGCCGAACGTCGCCCAGCGCGCAGCACGCGATCATGTGCGGACCGTGAAAAAGAATCTCCACGATATCGAGCTGGAAGGCCACCATTTGATTCGCTCGGCGGTGCCGCTGGAGATGAACCTGAGTTAGCTGGTATTAAATCTGCTTGTCATACAATCGGTAACGCTTGTACGGCTCCGCCCCAATGCGTTCCAGCATGTTATTCAt                                                                                                                                                                                <  1:21062/232‑1 (MQ=255)                                                                                                                                            cgcgGTGTTGCAGCGGCTGCCGCACGTCGCCCAGCGCGCCGCACGCGATCATGTGCGGACCGTGAAAAAGAATCTCCACGATATCGAGCTGGAAGGCCACCATTTGATTCGCTCGGCGGTGCCGCTGGAGATGAACCTGAGTTCGCTGGTAGTAAATCTGCTTTTCATACAATCGGTAACGCTTGTACGGCTCCGCCCCAATGCGTTCAAGCAGGTTATTCATGCCTGTATTGGATTCGAga                                                                                                                                                             >  1:155068/1‑241 (MQ=255)                                                                                                                                              cgGTGTTGCAGCGGCTGCCGCACGTCGCCCAGCGCGCAGCACGCGATCATGTGCGGACCGTGAAAAAGAATCTCCACGATATCGAGCTGGAAGGCCACCATTTGATTCGCTCGGCGGTGCCGCTGGAGATGatg                                                                                                                                                                                                                                                                       >  1:465311/1‑132 (MQ=255)                                                                                                                                              cgGTGTTGCAGCGGCTGCCGCACGTCGCCCAGCGCGCAGCACGCGATCATGTGCGGACCGTGAAAAAGAATCTCCACGATATCGAGCTGGAAGGCCACCATTTGATTCGCTCGGCGGTGCCGCTGGAGATGAACCTGAGTTAGCTGGTATTAAATCTGCTTTTCATACAATCg                                                                                                                                                                                                                                >  1:206863/1‑173 (MQ=255)                                                                                                                                              cgGTGTTGCAGCGGCTGCCGCACGTCGCCCAGCGCGCAGCACGCGATCATGTGCGGACCGTGAAAAAGAATCTCCACGATATCGAGCTGGAAGGCCACCATTTGATTCGCTCGGCGGTGCCGCTGGAGATGAACCTGAGTTAGCTGGTATTAAATCTGCTTTTCATACAATCGGTAACGCTTGTACGGCTCCGCCCCAATGCGt                                                                                                                                                                                                 >  1:456801/1‑204 (MQ=255)                                                                                                                                              cgGGGTTGCAGCGGCTGCCGGACGTCGCCCAGCGCGCAGCACGCGATCATGCGCGGCCCGTGAAAAAGAATCCGCACGATATCGCGCTGGAAGGCCACCATTTGATTCGCTCGCCGGTGCCGCTGGAGATGAACCTGAGCTACCGTGCATTAAAACTGCGTTTCATAACATCGGTAACTCTTGTACGGCTCCGCCCCAATGCGATCAAGCATGGTATTCATGCTTGTATTGGTTGCGTGGCTCCATGACATCTCCAGCGGCTCGATTTTCtgggg                                                                                                                          >  2:237038/1‑273 (MQ=255)                                                                                                                                                 tgtTGCAGCGGCTGCCGCACGTCGCCGAGCGCGCAGCACGCGATCATGTGCGGACCGTGAAAAAGAATCTCCACGATATCGAGCTGGAAGGCCACCATTTGATTCGCTCGGCGGTGCCGCTGGAGATGAACCTGAGTTAGCTGGTATTAAATCTGCTTTTCATACAATCGATAACGCTTGTACNGCTCCGCCNCAATGCGTTCCAGCATGTTATTCATGCCTGTATTGGTTTCGAGGATCCATGACATCTCCAGCGCATCGATCTTCCGGCGGGc                                                                                                                       >  1:472365/1‑275 (MQ=255)                                                                                                                                                  gtTGCAGCGGCTGCCGCACGTCGCCCAGCGCGCAGCACGCGATCATGTGCGGACCGTGAAAAAGAATCTCCACGATATCGAGCTGGAAGGCCACCATTTGATTCGCTCGGCGGTGCCGCTGGAGATGatggata                                                                                                                                                                                                                                                                   <  2:465304/134‑7 (MQ=255)                                                                                                                                                  gtTGCAGCGGCTGCCGCACGTCGCCCAGCGCGCAGCACGCGATCATGTGCGGACCGTGAAAAAGAATCTCCACGATATCGAGCTGGAAGGCCACCATTTGATTCGCTCGGCGGTGCCGCTGGAGATGAACCTGAGTTAGCTGGTATTAAATCTGCTTTTCATACAATCGGTaa                                                                                                                                                                                                                            <  2:206859/173‑1 (MQ=255)                                                                                                                                                  gtTGCAGCGGCTGCCGCACGTCGCCCAGCGCGCAGCACGCGATCATGTGCGGACCGTGAAAAAGAATCTCCACGATATCGAGCTGGAAGGCCACCATTTGATTCGCTCGGCGGTGCCGCTGGAGATGAACCTGAGTTAGCTGGTATTAAATCTGCTTTTCATACAATCGGTAACGCTTGTACGGCTCCGCCCCAATGCGTTCCa                                                                                                                                                                                             <  2:456794/204‑1 (MQ=255)                                                                                                                                                    tGCAGCGGCTGCCGCACGTCGCCCAGCGCGCAGCACGCGATCATGTGCGGACCGTGAAAAAGAATCTCCACGATATCGAGCTGGAAGGCCACCATTTGATTCGCTCGGCGGTGCCGCTGGAGATGAACCTGAGTTAGCTGGTATTAAATCTGCTTTTCATACAATCGGTAACGCTTGTACGGCTCCGCCCCAATGCGTTCCAGCATGTTATTCATGCCTGTATTGGTTTCGAGGATCCATGACATCTCCAGCGCATCGATCTTCCGGCGGGCaaa                                                                                                                    <  1:436199/275‑1 (MQ=255)                                                                                                                                                      cAGCGGCTGCCGCACGTCGCCCAGCGCGCAGCACGCGATCATGTGCGGACCGTGAAAAAGAATCTCCACGATATCGAGCTGGAAGGCCACCATTTGATTCGCTCGGCGGTGCCGCTGGAGATGAACCTGAGTTAGCTGGTATTAAATCTGCTTTTCATACAATCGGTAACGCTTGTACGGCTCCGCCCCAATGCGTTCCAGCATGTTATTCATGCCTGTATTGGTTTCGAGGATCCATGACATCTCCAGCGCATCGATCTTCCGGCGGGCAAACg                                                                                                                  <  1:246655/275‑1 (MQ=255)                                                                                                                                                        gCGGCTGCCGCACGTCGCCCAGCGCGCAGCACGCGATCATGTGCGGACCGTGAAAAAGAATCTCCACGATATCGAGCTGGAAGGCCACCATTTGATTCGCTCGGCGGTGCCGCTGGAGATGAACCTGAGTTAGCTGGTATTAAATCTGCTTTTCATACAATCGGTAACGCTTGTACGGCTCCGCCCCAATGCGTTCCAGCATGTTATTCATGCCTGTATTGGTTTCGAGGATCCATGACATCTCCAGCGCATCGATCTTCCGGCGGGCAAACGGa                                                                                                                <  1:326749/275‑1 (MQ=255)                                                                                                                                                         cGGCTGCCGCACGTCGCCCAGCGCGCAGCACGCGATCATGTGCGGACCGTGAAAAAGAATCTCCACGATATCGAGCTGGAAGGCCACCATTTGATTCGCTCGGCGGTGCCGCTGGAGATGAACCTGAGTTAGCTGGTATTAAATCTGCTTTTCATACAATCGGTAACGCTTGTACGGCTCCGCCCCAATGCGTTCCAg                                                                                                                                                                                            >  2:269563/1‑198 (MQ=255)                                                                                                                                                           gCTGCCGCACGTCGCCCAGCGCGCAGCACGCGATCATGTGCGGACCGTGAAAAAGAATCTCCACGATATCGAGCTGGAAGGCCACCATTTGATTCGCTCGGCGGTGCCGCTGGAGATGAACCTGAGTTAGCTGGTATTAAATCTGCTTTTCATACAATCGGTAACGCTTGTACGGCTCCGCCCCAATGCGTTCCAGCATGTTATTCATGCCTGTATTGGTTTCGAGGATCCATGACATCTCCAGCGCATCGCTCTTCCGGCGGGCAAACGGATc                                                                                                              >  1:298862/1‑274 (MQ=255)                                                                                                                                                           gCTGCCGCACGTCGCCCAGCGCGCAGCACGCGATCATGTGCGGACCGTGAAAAAGAATCTCCACGATATCGAGCTGGAAGGCCACCATTTGATTCGCTCGGCGGTGCCGCTGGAGATGAACCTGAGTTAGCTGGTATTAAATCTGCTTTTCATACAATCGGTAACGCTTGTACGGCTCCGCCCCAATGCGTTCCAGCATGTTATTCATGCCTGTATTGGTTTCGAGGATCCATGACATCTCCAGCGCATCGATCTTCCGGCGGGCAAACGGATc                                                                                                              >  1:82682/1‑274 (MQ=255)                                                                                                                                                             tGCCGCACGTCGCCCAGCGCGCAGCACGCGATCATGTGCGGACCGTGAAAAAGAATCTCCACGATATCGAGCTGGAAGGCCACCATTTGATTCGCTCGGCGGTGCCGCTGGAGATGAACCTGAGTTAGCTGGTATTAAATCTGCTTTTCATACAATCGGTAACGCTTGTACGGCTCCGCCCCAATGCGTTCCAGCATg                                                                                                                                                                                        <  1:269568/198‑1 (MQ=255)                                                                                                                                                                ccctcGTCTCCCAGCGCGCAGCACGCGATCATGTGCGGACCGTTAAAAAGAATCTCCACGATATCGAGCTGGAATGCCACCATTTGATTCGCTCGGCGGTGCCGCTGGAGATGAACCTGAGTTAGCTGGTATTAAATCTGCTTTTCATACAATCGGTACCGCTTGTACGGCTCCGCCCCAATGCGTTCCAGCATGTTATTCATGCCTGTATTGGTTTCCAGGATCCATGACATCTCCAGAACATCGATCTTCCGTCGGGCAAACGGATCGCGTa                                                                                                         <  1:452488/270‑1 (MQ=255)                                                                                                                                                                      tgtgccAGGGGGCAGCAGGTGATTATGTGCGGAACGTGAAAAAGAATCTCCACGATATCGAGCTGGAAGGCCACCATGTGATTCGCTCGGCGGTGCCGCTGGAGATGAACCTGAGTTAGCTGGTATTAAATCTGCTTTTCATACAATCGGTAACGCTTGTACGGCTCCGCCCCAATGCGTTCCAGCATGTTATTCATGCCTGTATTGGTTTCGAGGATCCATGACATCTCCAGCGCATCGATCTTCCGGCGGGCAAACGGATCGCGTAAGGCtt                                                                                                   <  1:371162/270‑1 (MQ=255)                                                                                                                                                                      tCGCCCAGCGCGCAGCACGCGATCATGTGCGGACCGTGAAAAAGAATCTCCACGATATCGAGCTGGAAGGCCACCATTTGATTCGCTCGGCGGTGCCGCTGGAGATGAACCTGAGTTAGCTGGTATTAAATCTGCTTTTCATACAATCGGTAACGCTTGTACGGCTCCGCCCCAATGCGTTCCAGCATGTTATTCATGCCTGTATTGGTTTCGAGGATCCATGACATCTCCAGCGCATCGATCTTCCGGCGGGCAAACGGATCGCGTAAGGCtt                                                                                                   <  2:82681/274‑1 (MQ=255)                                                                                                                                                                       ggaggaGCGGGCAGAAAGCGATAANGTGCGGACCGTGAAAAAGAATCTCCACGATATCGATCTGGAAGGCCACCATTTGATTCGCTCGGCGGTGCCGCTGGAGATGAACCTGAGTTAGCTGGTATTAAATCTGCTTTTCATACAATCGGTAACGCTTGTACGGCTCCGCCCCAATGCGTTCCAGCATGTTATTCATGCCTGTATTGGTTTCGAGGATCCATGACATCTCCAGCGCATCGATCTTCCGGCGGGCAAACGGATCGCGTAAGGCtt                                                                                                   <  2:472358/268‑1 (MQ=255)                                                                                                                                                                       cccccAGCGGGCCGCACGCGAGCATGTGCGGCCCGTTAACAAGAATCTCCACGATATCGGGCTGGAAGGCCACCATTTGATTCGCTCGGCGGTGCCGCTGGAGATGAACCTGAGTTAGCTGGTATTAAATCTGCTTTTCATACAATCGGTAACGCTTGTACGGCTCCGCCCCAATGCGTTCCAGCATGTTATTCATGCCTGTATTGGTTTCGAGGATCCATGACATCTCCAGCGCATCGATCTTCCGGCGGGCAAACGGATCGCGTAAGGCTtca                                                                                                 <  2:298856/273‑1 (MQ=255)                                                                                                                                                                        gCCCATCGCGCAGCACGCGATCATGTGCGGACCGTGAAAAAGAATCTCCTCGATATCGAGCTGGAAGGCCACCATTTGATTCGCTCGGCGGTGCTGCTGGAGATGAACCTGAGTTAGCTGGTATTAAATCTGCTTTTCATACAATCGGTAACGCTTGTACGGCTCCGCCCGAATGCGTTCCAGCATGTTATTCATGCCTGTATGGGTTTCGAGGATCCATGACATCTCCAGCGCATCGATCTTCCGGCGGGCAAACTGATCGCGTAAGGCtt                                                                                                   <  1:119947/272‑1 (MQ=255)                                                                                                                                                                        gCCCAGCGCGCAGCACTCGATCATGTGCGGACCGTGAAAAAGAAGCTCCACGATATCGAGCTGGAAGGCCACCATTTGATTCGCTCGGCGGTGCCGCTGGAGATGAACCTGAGTTAGCTGGTATTAAATCTGCTTTTCATACAATCGGTAACGCTTGTACGGCTCCGCCCCAATGCGTTCCAGCATGTTATTCATGCCTGTATTGGTTTCGAGGATCCATGACATCTCCAGCGCATCGATCTTCCGGCGGGCAAACGGATCGCGTAAGGCtt                                                                                                   <  1:237043/272‑1 (MQ=255)                                                                                                                                                                               gcgcAGCACGCGATCATGTGCGGACCGTGAAAAAGAATCTCCACGATATCGAGCTGGAAGGCCACCATTTGATTCGCTCGGCGGTGCCGCTGGAGATGtcatggatcctcgaaaccaatacaggcatgaataacatgctggaacgcattggggcggagccgtac                                                                                                                                                                                                        >  1:12132‑M1/1‑98 (MQ=255)                                                                                                                                                                               gcgcAGCACGCGATCATGTGCGGACCGTGAAAAAGAATCTCCACGATATCGAGCTGGAAGGCCACCATTTGATTCGCTCGGCGGTGCCGCTGGAGATGAACCTGAGTTAGCTGGTATTAAATCTGCTTTTCATACAATCGGTAACGCTTGTACGGCTCCGCCCCAATGCGTTCCAGCATGTTATTCATGCCTGTATTGGTTTCGAGGATCCATGACATCTCCAGCGCATCGATCTTCCGGCGGGCAAACGGATCGCGTAAGGCTTCAATCAATaa                                                                                         >  1:236935/1‑275 (MQ=255)                                                                                                                                                                                   agcaCGCGATCATGTGCGGACCGTGAAAAAGAATCTCCACGATATCGAGCTGGAAGGCCACCATTTGATTCGCTCGGCGGTGCCGCTGGAGATGtcatggatcctcgaaaccaatacaggcatgaataacatgctggaacgcattggggcggagccgtacaagc                                                                                                                                                                                                    <  2:12132‑M1/164‑71 (MQ=255)                                                                                                                                                                                               tgtgCGGACCGTGAAAAAGAATCTCCACGATATCGAGCTGGAAGGCCACCATTTGATTCGCTCGGCGGTGCCGCTGGAGATGAACCTGAGTTAGCTGGTATTAAATCTGCTTTTCATACAATCGGTAACGCTTGTACGGCTCCGCCCCAATGCGTTCCAGCATGt                                                                                                                                                                                       >  2:220406/1‑165 (MQ=255)                                                                                                                                                                                                 tgCGGACCGTGAAAAAGAATCTCCACGATATCGAGCTGGAAGGCCACCATTTGATTCGCTCGGCGGTGCCGCTGGAGATGAACCTGAGTTAGCTGGTATTAAATCTGCTTTTCATACAATCGGTAACGCTTGTACGGCTCAGCCCCAATGCGGTCCAGCATGTTATTCATGCCTGTATTGGTTTCGAGGATCCATCACATCTCCAGCGCATCGATCTTCCGGCGGGAAAACGGATCGCGTAAGGATGCAATCAATAACAGCACAATCACCgaccc                                                                       >  1:693982/1‑271 (MQ=255)                                                                                                                                                                                                   cGGACCGTGAAAAAGAATCTCCACGATATCGAGCTGGAAGGCCACCATTTGATTCGCTCGGCGGTGCCGCTGGAGATGAACCTGAGTTAGCTGGTATTAAATCTGCTTTTCATACAATCGGTAACGCTTGTACGGCTCCGCCCCAATGCGTTCCAGCATGTTAtt                                                                                                                                                                                   <  1:220411/165‑1 (MQ=255)                                                                                                                                                                                                     gagcggaaaaaaGAGGCTCCGCGGTATCGGGCTGGAAGGCCACCGTTGGATTCGCTCGGCGTTTCCGCTGGAGATGTACCTTAGTTAGCTGGTATTAAATCTGCTTTTCATACAATCGGTAACGTTTGTACGGCTCCGCCCAAATGCGGTCCAGCATGTTATTCATGCCTGTATTGGTTTCGAGGGTCAATCACATCTCCAGCGCATCGATCTTCCGGCGGACAGCCGGATCGCGTAAGGCTTCAATCAATAACAGCGCAATCACCGTGCCGATg                                                                   <  2:194388/268‑1 (MQ=255)                                                                                                                                                                                                      aCCGTGAAAAAGAATCTCCACGATATCGAGCTGGAAGGCCACCATTTGATTCGCTCGGCGGTGCCGCTGGAGATGAACCTGAGTTAGCTGGTAtt                                                                                                                                                                                                                                                      >  2:71225/1‑95 (MQ=255)                                                                                                                                                                                                      aCCGTGAAAAAGAATCTCCACGATATCGAGCTGGAAGGCCACCATTTGATTCGCTCGGCGGTGCCGCTGGAGATGAACCTGAGTTAGCTGGTATTAAATCTGCTTTTCATACAATCGGTAACGCTTGTACGGCTCCGCCCCAATGCGTTCCAGCATGTTATTCATGCCTGTATTGGTTTCGAGGATCCATGACATCTCCAGCGCATCGATCTTCCGGCGGGCaaa                                                                                                                    >  1:87101/1‑225 (MQ=255)                                                                                                                                                                                                          tGAAAAAGAATCTCCACGATATCGAGCTGGAAGGCCACCATTTGATTCGCTCGGCGGTGCCGCTGGAGATGAACCTGAGTTAGCTGGTATTAAAt                                                                                                                                                                                                                                                  <  1:71226/95‑1 (MQ=255)                                                                                                                                                                                                          tGAAAAAGAATCTCCACGATATCGAGCTGGAAGGCCACCATTTGATTCGCTCGGCGGTGCCGCTGGAGATGAACCTGAGTTAGCTGGTATTAAATCTGCTTTTCATACAATCGGTAACGCTTGTACGGCTCCGCCCCAATGCGTTCCAGCATGTTATTCATGCCTGTATTGGTTTCGAGGATCCATGACATCTCCAGCGCATCGATCTTCCGGCGGGCAAACGGa                                                                                                                <  2:87100/225‑1 (MQ=255)                                                                                                                                                                                                                aGAATCTCCACGATATCGAGCTGGAAGGCCACCATTTGATTCGCTCGGCGGTGCCGCTGGAGATGAACCTGAGTTAGCTGGTATTAAATCTGCTTTTCATACAATCGGTAACGCTTGTACGGCTCCGCCCCAATGCGt                                                                                                                                                                                                 >  2:65169/1‑138 (MQ=255)                                                                                                                                                                                                                    tctcCACGATATCGAGCTGGAAGGCCACCATTTGATTCGCTCGGCGGTGCCGCTGGAGATGAACCTGAGTTAGCTGGTATTAAATCTGCTTTTCATACAATCGGTAACGCTTGTACGGCTCCGCCCCAATGCGTTCCa                                                                                                                                                                                             <  1:65170/138‑1 (MQ=255)                                                                                                                                                                                                                                cGAGCTGGAAGGCCACCATTTGTCTCGGCCGGCGGTACCGCTGGAGATGAAc                                                                                                                                                                                                                                                                       <  1:487703/52‑1 (MQ=255)                                                                                                                                                                                                                                cGAGCTGGAAGGCCACCATTTGATTCGCTCGGCGGTGCCGCTGGAGATGAACCTGAGTTAGCTGGTATTAAATc                                                                                                                                                                                                                                                 >  1:417431/1‑74 (MQ=255)                                                                                                                                                                                                                                  aGCTGGAAGGCCACCATTTGATTCGCTCGGCGGTGCCGCTGGAGATGAACCTGAGTTAGCTGGTATTaa                                                                                                                                                                                                                                                    >  1:128965/1‑69 (MQ=255)                                                                                                                                                                                                                                    cTGGAAGGCCACCATTTGATTCGCTCGGCGGTGCCGCTGGAGATGAACCTGAGTTAGCTGGTATTAATTCTGCt                                                                                                                                                                                                                                             <  2:417424/74‑1 (MQ=255)                                                                                                                                                                                                                                      ggAAGGCCACCATTTGATTCGCTCGGCGGTGCCGCTGGAGATGAACCTGAGTTAGCTGGTATTAAATCt                                                                                                                                                                                                                                                <  2:128964/69‑1 (MQ=255)                                                                                                                                                                                                                                       gAAGGCCACCATTTGATTCGCTCGGCGGTGCCGCTGGAGATGAACCTGAGTTAGCTGGTATTAAATCTGCTTTTCATACAATCGGTAACGCTTGTACGGCTCCGCCCCAATGCGTTCCAGCATGTTATTc                                                                                                                                                                                  >  1:308504/1‑130 (MQ=255)                                                                                                                                                                                                                                       gAAGGCCACCATTTGATTCGCTCGGCGGTGCCGCTGGAGATGAACCTGAGTTAGCTGGTATTAAATCTGCTTTTCATACAATCGGTAACGCTTGTACGGCTCCGCCCCAATGCGTTCCAGCATGTTATTCATGCCTGTATTGGTTTCGAGGATCCATGACATCTCCAGCGCATCGATCTTCCGGCGGGCAAACGGCTCGCGTAAGGCTTCAATCAATAACAGCGCAATCACCGGGCCGATGCGGCTGAACTGATCCTCATAGCACACGCCCa                                    >  1:700594/1‑272 (MQ=255)                                                                                                                                                                                                                                       gAAGGCCACCATTTGATTCGCTCGGCGGTGCCGCTGGAGATGAACCTGAGTTAGCTGGTATTAAATCTGCTTTTCATACAATCGGTAACGCTTGTACGGCTCCGCCCCAATGCGTTCCAGCATGTTATTCATGCCTGTATTGGTTTCGAGGATCCATGACATCTCCAGCGCATCGATCTTCCGGCGGGCAAACGGATCGCGTAAGGCTTCAATCAATAACAGCGCAATCACCGGGCCGATGCGGCTGAACTGATACTCGTCGCGCACGCCCATCa                                 >  1:115232/1‑275 (MQ=255)                                                                                                                                                                                                                                        aaGGCCACCATTTGATTCACCAGGCGGTGCCGCTGGAGATGAAACTTAGTTTGCTGGTATTAAATCTGCTTTTCATACGATCGGGAACGCTTGTACGGCTCCGCCCAAATGCGTGCCAGCATGTTAATCATGCTTTTATTGGTTTCGAGGATCCATGACATCTCCAGCGCATCGATCTTCCGGCAGGCAAACGGATCGCGTAAGGCTTCAATCAATAACAGCGCAATCACCGGGCCGAGGCGGCTGAACTGATACTCGTCGCGCACGCCCATCAg                                <  2:700585/275‑1 (MQ=255)                                                                                                                                                                                                                                           gCCACCATTTGATTCGCTCGGCGGTGCCGCTGGAGATGAACCTGAGTTAGCTGGTATTAAATCTGCTTTTCATACAATCGGTAACGCTTGTACGGCTCCGCCCCAATGCGTTCCAGCATGTTATTCATGc                                                                                                                                                                              <  2:308498/130‑1 (MQ=255)                                                                                                                                                                                                                                             cacctTTTGATTCGCTCGGCGGTGCCGCTGGAGATGAACCTGAGTTAGCTGGTATTAAATCTGCTTTTCATACAATCGGTAACGCTTGTACGGCTCCGCCCCAATGCGTTCCAGCATGTTATTCATGCCTGTATTGGtt                                                                                                                                                                   >  1:291031/1‑139 (MQ=255)                                                                                                                                                                                                                                                 ttttGATTCGCTCGGCGGTGCCGCTGGAGATGAACCTGAGTTAGCTGGTATTAAATCTGCTTTTCATACAATCGGTAACGCTTGTACGGCTCCGCCCCAATGCGTTCCAGCATGTTATTCATGCCTGTATTGGTTTCGa                                                                                                                                                               <  2:291025/138‑1 (MQ=255)                                                                                                                                                                                                                                                    tGAGTCGCTCGGGGGTGCCGCTGGATATGAACCTGAGTTAGCTGGTATTAAATCTGCTTTTCATACAATCGGTAACGCTTGTACGGCTCCGCCCCAATGCGTTCCAGCATGTTATTCATGCCTGTATTGGTTTCGAGGATCCATGACATCTCCAGCGCATCGATCTTCCGGCGGGCAAACGGATCGCGTAAGGCTTCAATCAATAACAGCGCAATCACCGGGCCGATGCGGCTGAACTGATACTCGTCGCGCACGCCCATCAGCGGTACTCgcgc                    <  2:28856/275‑1 (MQ=255)                                                                                                                                                                                                                                                      aTTCGCTCGGCGGTGCCGCTGGAGATGAACCTGAGTTAGCTGGTATTAAATCTGCTTTTCATACAATCGGTAACGCTTGTAc                                                                                                                                                                                                                   >  2:526104/1‑82 (MQ=255)                                                                                                                                                                                                                                                      aTTCGCTCGGCGGTGCCGCTGGAGATGAACCTGAGTTAGCTGGTATTAAATCTGCTTTTCATACAATCGGTAACGCTTGTAc                                                                                                                                                                                                                   >  2:319872/1‑82 (MQ=255)                                                                                                                                                                                                                                                       ttCGCTCGGCGGTGCCGCTGGAGATGAACCTGAGTTAGCTGGTATTAAATCTGCTTTTCATACAATCGGTAACGCTTGTACGGCTCCGCCCCAATGCGt                                                                                                                                                                                                 >  2:337913/1‑99 (MQ=255)                                                                                                                                                                                                                                                          gCTCGGCGGTGCCGCTGGAGATGAACCTGAGTTAGCTGGTATTAAATCTGCTTTTCATACAAt                                                                                                                                                                                                                                  >  1:45788/1‑63 (MQ=255)                                                                                                                                                                                                                                                          gCTCGGCGGTGCCGCTGGAGATGAACCTGAGTTAGCTGGTATTAAATCTGCTTTTCATACAATCGGTAACGCTTGTACGGCt                                                                                                                                                                                                               <  1:526111/82‑1 (MQ=255)                                                                                                                                                                                                                                                          gCTCGGCGGTGCCGCTGGAGATGAACCTGAGTTAGCTGGTATTAAATCTGCTTTTCATACAATCGGTAACGCTTGTACGGCt                                                                                                                                                                                                               <  1:319878/82‑1 (MQ=255)                                                                                                                                                                                                                                                          gCTCGGCGGTGCCGCTGGAGATGAACCTGAGTTAGCTGGTATTAAATCTGCTTTTCATACAATCGGTAACGCTTGTACGGCTCCGCCCCAATGCGTTCCAg                                                                                                                                                                                            >  2:261074/1‑101 (MQ=255)                                                                                                                                                                                                                                                           cTCGGCGGTGCCGCTGGAGATGAACCTGAGTTAGCTGGTATTAAATCTGCTTTTCATACAATCGGTAACGCTTGTACGGCTCCGCCCCAATGCGTTCCa                                                                                                                                                                                             <  1:337919/99‑1 (MQ=255)                                                                                                                                                                                                                                                              ggcggTGCCGCTGGAGATGAACCTGAGTTAGCTGGTATTAAATCTGCTTTTCATACAATCGGt                                                                                                                                                                                                                              <  2:45788/63‑1 (MQ=255)                                                                                                                                                                                                                                                              ggcggTGCCGCTGGAGATGAACCTGAGTTAGCTGGTATTAAATCTGCTTTTCATACAATCGGTAACGCTTGTACGGCTCCGCCCCAATGCGTTCCAGCATg                                                                                                                                                                                        <  1:261079/101‑1 (MQ=255)                                                                                                                                                                                                                                                                       gCTGGAGATGtcatggagcctcgaaaccaatacgggcaggaataacatgctggaacgcattggggcgaagccgtacaagcgttaccgattgtatgaaaagcagatttaataccagctaactcaggttcatctccagcggcaccgccgagcgaatcaaatggtggccttccagctcgatttcgtggagattctttttcacggtccgcacatgatcgcgtgctgcgcgctgggcgacgtgcgtcagccgctgcaacaccgctttgtagatccgcgc  <  1:194391‑M1/274‑265 (MQ=255)                                                                                                                                                                                                                                                                                |                                                                                                                                                                                                                                                                         CTCACAATCAGGTGCTGGTGTTTACGCTGCAATCATTGACCGATCTGATGTTTAATTCAGTGTTTGCCAGCGTAAATAATCTCTACCATCGACCACAGCAAAAAAAGCAGATCGATCGCCAGCATGCGCGGATCTACAACGCGGTGTTGCAGCGGCTGCCGCACGTCGCCCAGCGCGCAGCACGCGATCATGTGCGGACCGTGAAAAAGAATCTCCACGATATCGAGCTGGAAGGCCACCATTTGATTCGCTCGGCGGTGCCGCTGGAGATGAACCTGAGTTAGCTGGTATTAAATCTGCTTTTCATACAATCGGTAACGCTTGTACGGCTCCGCCCCAATGCGTTCCAGCATGTTATTCATGCCTGTATTGGTTTCGAGGATCCATGACATCTCCAGCGCATCGATCTTCCGGCGGGCAAACGGATCGCGTAAGGCTTCAATCAATAACAGCGCAATCACCGGGCCGATGCGGCTGAACTGATACTCGTCGCGCACGCCCATCAGCGGTACTCGCGCAGTTCGCACACCGCTGAC  >  CP009273/3122112‑3122647

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.